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EBI DbfetchID BX640444; SV 1; linear; genomic DNA; STD; PRO; 349008 BP. XX AC BX640444; XX DT 09-AUG-2003 (Rel. 76, Created) DT 29-JUL-2008 (Rel. 96, Last updated, Version 5) XX DE Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 XX KW complete genome. XX OS Bordetella bronchiseptica OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. XX RN [2] RP 1-349008 RA Sebaihia M.; RT ; RL Submitted (06-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: RL ms5@sanger.ac.uk XX RN [3] RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., RA Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., RA Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., RA Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., RA Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., RA Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., RA Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., RA Barrell B.G., Maskell D.J.; RT "Comparative analysis of the genome sequences of Bordetella pertussis, RT Bordetella parapertussis and Bordetella bronchiseptica"; RL Nat. Genet. 35(1):0-0(2003). XX DR EMBL-CON; BX470250. DR RFAM; RF00005; tRNA. XX FH Key Location/Qualifiers FH FT source 1..349008 FT /organism="Bordetella bronchiseptica" FT /strain="RB50" FT /mol_type="genomic DNA" FT /db_xref="taxon:518" FT CDS 290..5026 FT /transl_table=11 FT /gene="bipA" FT /locus_tag="BB2303" FT /product="putative outer membrane ligand binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1112" FT /db_xref="HSSP:1LJM" FT /db_xref="UniProtKB/TrEMBL:Q9APE8" FT /protein_id="CAE32799.1" FT /translation="MNKNIYRVVWSLVRGAWVVAGEWARAGRKSSSPRRQNRQRARRGV FT AAMVGGSILAQALLPLSALAQGAPTLRPARVAQEEAGQDAAWTRKLAAQAESLARRQAE FT RQPGARVDGDYLKREAQAQVNDVLRDGVNLARESGLPFLRNLQGGLSHDFESGRTSLQL FT NTIDEVYRAGRNTGLLQLGAHNQNDRPTANAGAVYRREVNDALMVGANGFLDYEFGKQH FT LRGSVGLEVIAPEFSLYGNVYAPLSDWKGAKRNNRREEKPASGMDVGVGYRPAFAPGLS FT LSATHFRWNGAEVDYFDNGRTQAGAKGFKVGVEYRPVSLVSVGLEQTKVIGGGRETRMQ FT LGLNINLSEPLSKQLRRDASGTPAFSPDARRHALVERENRIVLNTRRKEIILPLVVSEV FT STLQADGRVTVIGATQPFATVTVRMPDGTTGTATADASGRFAYTSAGDQPSGVLALRAR FT NAEGDSSREVTYRYVDEVVLGDLQVAVMALVPLPADRALEVRGKTEPKIDVKVSFPNGE FT SVLAKADAKGLFTVRSTRKVAQGKVLVQATHPQTRKEARAVADYLPPATLAPTIDAVTA FT QADTGRVTVTGQAEPGAQVDVHFPDGTAKTVDAGADGAYAATSDGDMVSGDIRVQAVDK FT AGGKSPETIRAYVDTVDKTAPVVPTIADVATDAKSGHITVTGMTEPGAEVVVSFPDGTR FT KTVVAGDDGAYTATSDGDMVAGDIRVQAIDKAGGKSPEATRHYDDAVDITPPAAPTIAN FT VATDAASGRVTVAGVAEPGANVAVNFPDGTRKTVVAGGDGAYTATSDRDMVSGDIRVQA FT VDKAGNQSPETTRAYADAVDKTAPEVPTIANVTTDAKSGRITVTGMAEPGVNVAVDFPD FT GTRKSVVADGAGAYTATSDRDMVSGDIHAQATDKAGNQSPEATRHYGDTTDITPPAAPT FT IDNVATDATSGRVTAAGVAEPGANVTVNFPDGTRKTVVAGGDGAYTATSDRDMVSGDIR FT VQATDKAGNQSPEATRAYADAVDRTAPEVPTVTHVATDAKSGRITVTGMAEPGANVTVN FT FPDGTRKTVVAGGDGAYAATSDRDMVSGDIRVQATDKAGNRSPEATRAYADTVDTTPPA FT VPTITDVTTDASNGRITVTGVAESGANVTVDFPDGTRKTVVAGGDGAYTATSDRDMVSG FT DVRVQAIDKGGNHSPEATRAYADAVDKTAPEVPTITNVTTDAASGRITVTGMAEPGANV FT AVNFPDGTRKTVVADGAGAYAADSDGDMVAGDIHVQATDKAGNRSPEGTRAYVDTVDKT FT PSAAPTIARVTTDRSSGVVTVAGTADPDNDVTVHFPDGGRKTVKAGKDGSYSVTSDNDI FT FSGIIQVSARNPAGNASPEVRQDYRDEFVPANAITNMETNSRNGIVTVSGKTSPDATVV FT VSFPGGDEARTRAKGDGTFSVSSPMDVPRGVVSLSTEVDGVRTVVATRTYEDKFTKGGQ FT DYNAILPYTPGFNGVSTSDTSAVLLSVPQYFYSGGAPVAKIMPPDAHDSEFTKRAAAAM FT RVQVTSRRNSSEYDIRVSWPAGTFTPADVGQQADLVVKIFDVGTGKFMLAPGEVRFRR" FT misc_feature 419..487 FT /note="1 probable transmembrane helix predicted for BB2303 FT by TMHMM2.0 at aa 44-66" FT misc_feature 1775..1798 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 4145..4195 FT /note="PS00237 G-protein coupled receptors signature." FT CDS 5199..7673 FT /transl_table=11 FT /locus_tag="BB2304" FT /product="putative competence protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1113" FT /db_xref="GOA:Q7WK36" FT /db_xref="InterPro:IPR004477" FT /db_xref="UniProtKB/TrEMBL:Q7WK36" FT /protein_id="CAE32800.1" FT /translation="MTAMDAAMGRVMGVAFVAGTAMVQGLATLDGVVGFACLAALGALA FT AWRAARRAGRPWRVCGKLALPALAASLGVASAAGQAQWRLADAVDPARHNRVARVEARV FT AQLAQGDAGSRRFVARLPDDRPAGLPARLLVTWRALPGQALPEVVPGQRWRMALRVRRP FT HANQNPHAPDSEARLLARGVRGLASVRGRPLLLDDDPWADAGIAIERARHRVRAGMRQA FT LAGLRYAPVLVALAIGDQAGVAREDWQVFQRSGIMHLVSISGMHVTAVAALGGWLAGWL FT WRRARWRGVPLAERAPAQRVAVLAALGPALAYCLLAGWSVPTRRAFFMLAAVAAAVALR FT WPATPSRLLTLAAVAVAVLDPWAPLAPGFWLSFGAVAVLVGTGAGARPRGMRARLRAAL FT LGFGRTQMAVTLALTPLLAFLVRQVSLGSPLANALAIPVVSLAVTPLALLCGALSALPG FT GQGPAWLAGAAGHGLFALLMAPVGWIGRAEWSGLDVAAAPWPWLALALAGAAWALQAPG FT WPARHCGWLCMLPLLAWRPERPPPGYWTLTALDVGQGGAVVLETARHVLLFDTGPRHGD FT ASDAGERVIAPFLRARGYRHIDTLVVSHADLDHTGGLRSVLAALPVGQAYASFDLAAWL FT ARQARVRPDGWRAAPRMPPATRGCEAGVQWRVDGVRLRFVYPPPLAAPLPWRSSNARSC FT VLLVEGVGHRALLTGDVGLVQEAAFAAALPPVDLVMAPHHGSAMSSGSLLAAATRPAHA FT IAQAGYLNRFGHPAASAINRWRRAGAAVWRTDLDGAVRADSTPRGLFASGQRQVARRYW FT RDSRAGPDAPLR" FT misc_feature join(5217..5276,5289..5348,5862..5930,5973..6041, FT 6099..6167,6282..6350,6387..6455,6498..6566,6585..6653) FT /note="9 probable transmembrane helices predicted for FT BB2304 by TMHMM2.0 at aa 7-26, 31-50, 222-244, 259-281, FT 301-323, 362-384, 397-419, 434-456 and 463-485" FT misc_feature 5898..6752 FT /note="HMMPfam hit to PF03772, DE Competence protein, score FT 6.9e-36" FT misc_feature 6843..7454 FT /note="HMMPfam hit to PF00753, DE Metallo-beta-lactamase FT superfamily, score 0.0014" FT CDS 7673..8641 FT /transl_table=11 FT /locus_tag="BB2305" FT /product="probable hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1115" FT /db_xref="GOA:Q7WK35" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7WK35" FT /protein_id="CAE32801.1" FT /translation="MGHRRPSGPRRGDIMQEPRLDFVTCASPTGFHRMAYWEWGDPLND FT RVLVCVHGLTRTGRDFDHLARRLAGQWRVVCPDVAGRGKSDWLSNPALYAVPQYVSDMA FT TLIARVRPATLAWVGTSMGGLIGLGLAGAATMMRLARAMRPRPDGLPAQADDLRLHRLV FT LNDVGPRLNVEALQRIAGNVAAQDSYPTFEAAVAAMRQISTTFGPHTDAQWDELARHIY FT VRQGGGWVRHFDPALAVPLGAQVAQAFEAGERILWQAYDSLDCPVLIVRGQDSDLLSAA FT TAAEMLGRNPRARLHEVPGVGHAPTLMTPEQIEPIARFLQD" FT misc_feature 7886..8632 FT /note="HMMPfam hit to PF00561, DE alpha/beta hydrolase FT fold, score 0.00038" FT misc_feature 8015..8083 FT /note="1 probable transmembrane helix predicted for BB2305 FT by TMHMM2.0 at aa 115-137" FT CDS 8711..9556 FT /transl_table=11 FT /locus_tag="BB2306" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1116" FT /db_xref="GOA:Q7WK34" FT /db_xref="InterPro:IPR003141" FT /db_xref="UniProtKB/TrEMBL:Q7WK34" FT /protein_id="CAE32802.1" FT /translation="MNIAAPNVDLHCHSTVSDGSMPPAAVARRAHANGVDVWALTDHDE FT IGGVAEAAQAAAGLGMRFVAGVEISVTWAGLTVHIVGLRVDPANEALVQGLRDTRAGRA FT ARAVQIGERLAGLGMPGAYEGALPFAGNPELISRTHFARFLVEAGYCPDVQTVFNKYLG FT DDCPGHVPMQWASLAEAVGWIRGAGGCAVIAHPGRYKYSPMQFDALYDEFLQLGGTGIE FT VVTGSHTSEEARRYAEVARRHGFLASRGSDFHSPTESRVDLGRLPPLPPDLKPVWHDWF FT " FT misc_feature 8732..8923 FT /note="HMMPfam hit to PF02231, DE PHP domain N-terminal FT region, score 1.7e-18" FT misc_feature 9233..9496 FT /note="HMMPfam hit to PF02811, DE PHP domain C-terminal FT region, score 0.55" FT CDS 9624..10178 FT /transl_table=11 FT /gene="greB" FT /locus_tag="BB2307" FT /product="transcription elongation factor" FT /note="ortholog of Bordetella pertussis (BX470248) BP1117" FT /db_xref="GOA:Q7WK33" FT /db_xref="HSSP:1GRJ" FT /db_xref="InterPro:IPR018151" FT /db_xref="UniProtKB/TrEMBL:Q7WK33" FT /protein_id="CAE32803.1" FT /translation="MNKAFVKESDRDDEDDLPEAQALPAGTRNYMTPQGYARLRDELSH FT LMNVERPSVVQVVSWAASNGDRSENGDYLYGKKRLREIDRRMRFLTKRLDIAEVVDPAA FT QPNRDQVFFGATVLYMDRAGEERTVTIVGVDEAEPLAGKISWISPVARALTKAHEGDTV FT TLRTPGGVEELEILEVRYPDA" FT misc_feature 9699..9920 FT /note="HMMPfam hit to PF03449, DE Prokaryotic transcription FT elongation factor, GreA/GreB, N-terminal domain, score FT 6.6e-32" FT misc_feature 9717..9842 FT /note="PS00829 Prokaryotic transcription elongation factors FT signature 1." FT misc_feature 9936..10166 FT /note="HMMPfam hit to PF01272, DE Prokaryotic transcription FT elongation factor, GreA/GreB, C-terminal domain, score FT 2.3e-20" FT CDS complement(10369..11397) FT /transl_table=11 FT /locus_tag="BB2308" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2671" FT /db_xref="GOA:Q7WK32" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q7WK32" FT /protein_id="CAE32804.1" FT /translation="MKFRNIVGAALCAAFALGVAPAQAQNYKSEYKLSIVVGTTFPWGQ FT GAVIWSDLVRERTEGRINIKVYPGTSLVQGDQTREFTAIRQGVIDMAVGSTINWSPQVK FT QLNLFSLPFLMPDYAAIDALVQGEVGKEVFKLIDKAGVVPLAWGENGYRQLSNSKHEIK FT TPADMKGLKLRVVGSPLYIDTFTALGANPTQMSWADAQPALASGAVDGQENPLSIYTGS FT KLYTVGQKYLTLWNYVADPLIFVVNREVWNSWSEKDRDIVRQAALDAGKQQIVIARKGV FT TPEDPSLLKEIAGHGVTVSRLDAGQHAEFVAATKPVYEKWKKQIGAELVDLAEKSIAAR FT KK" FT misc_feature complement(10423..11301) FT /note="HMMPfam hit to PF03480, DE Bacterial extracellular FT solute-binding protein, family 7, score 1.6e-83" FT misc_feature complement(11326..11397) FT /note="Signal peptide predicted for BB2308 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.994 between residues 24 and 25" FT CDS complement(11477..12775) FT /transl_table=11 FT /locus_tag="BB2309" FT /product="putative membrane permease" FT /note="ortholog of Bordetella pertussis (BX470248) BP2670" FT /db_xref="GOA:Q7WK31" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q7WK31" FT /protein_id="CAE32805.1" FT /translation="MIAALLFAVFITLMLIGVPVGVALGLGGTVAIVLSNLDVSWFGLL FT AVPQNFYAGLAKYPLLAIPMFVLVGSIFDRSGVARRLVDFAVALVGRGPGMLPLVSIAV FT AMFLGGISGSGPACAAAVGAVMIAAMSRAGYPAPYSAAVVAAGAATDILIPPSVAFIIY FT SVLVPGASVPALFAAGMVPGILAGFALIIPAVWLARRHGMGAREAHLPRPPLWASLREA FT SWGLAAPVLILGGMRMGWFTPTEAAVVAVFYGLFVGMCIHRTIKVRDLFVILREAAELS FT AVIMLVVTLAGIFAWALSTLSVIDPITHAIVNSGLGEWGVLALLIVLLMTVGMFLDGIS FT IFLIFVPLLMPIANAYGWDPVWFGVILTLKVALGQFTPPLAVNLMVSCRIARVPMESTV FT GWVVWLLGGMFLVLVAVLIFPQLALWLPHRLGY" FT misc_feature complement(join(11519..11587,11624..11692,11702..11755, FT 11768..11821,11864..11932,11993..12061,12188..12256, FT 12275..12343,12386..12454,12557..12625,12695..12763)) FT /note="11 probable transmembrane helices predicted for FT BB2309 by TMHMM2.0 at aa 5-27, 51-73, 108-130, 145-167, FT 174-196, 239-261, 282-304, 319-336, 341-358, 362-384 and FT 397-419" FT misc_feature complement(11891..12370) FT /note="HMMPfam hit to PF00597, DE DedA family, score FT 2.6e-08" FT misc_feature complement(12701..12775) FT /note="Signal peptide predicted for BB2309 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.939) with cleavage site FT probability 0.469 between residues 25 and 26" FT CDS complement(12772..13353) FT /transl_table=11 FT /locus_tag="BB2310" FT /product="putative integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2669" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q7WK30" FT /protein_id="CAE32806.1" FT /translation="MQPLILPALCSTLLPMHRPDASDEPVEPIIPPEADPAVKVPLALE FT DWLAVILLAALAIITFLNVLVRYLTDQSFAWTEEISVFLLIVLTMVGASMAFVRNHHIR FT IEILADNGSPRRQYLMALTAHSLVVFFFALLTVLSARLVYDEFRYEETSPAIGVPTWWY FT SVWMPLLAAVITLRVAGAARRLIARHKAET" FT misc_feature complement(join(12811..12879,12922..12990,13051..13119, FT 13147..13215)) FT /note="4 probable transmembrane helices predicted for FT BB2310 by TMHMM2.0 at aa 47-69, 79-101, 122-144 and FT 159-181" FT CDS 13666..17712 FT /transl_table=11 FT /gene="purL" FT /locus_tag="BB2311" FT /product="phosphoribosylformylglycinamidine synthase" FT /EC_number="6.3.5.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP2668" FT /db_xref="GOA:Q7WK29" FT /db_xref="InterPro:IPR010918" FT /db_xref="UniProtKB/TrEMBL:Q7WK29" FT /protein_id="CAE32807.1" FT /translation="MSLVQHLPGSSVLSAFRRERLLAQLKKAGLPVADISARYEHFIHT FT DSALPAEQQARLAQLLDYGTPAAEAPAKSLELLVIPRLGTMSPWASKATDIAHNCGLDA FT VRRIERGVRYALTPERGLLGAKSFDAGMLARAAACLHDRMTETVVDGTFDGQALFETLA FT GKPMRTVAVQAEGRAALEQANVALGLALSEDEIDYLAQSFGDLGRDPTDVELMMFAQAN FT SEHCRHKIFNAQWVIDGQAQSNTLFGMIRATHKAQPAGTVVAYSDNAAIMEGGPAQRFQ FT AGVPGVAGEGAQAARYVRRDTTVHTLMKVETHNHPTAIAPFPGAATGAGGEIRDEGATG FT RGSKPKAGLTGFTVSHLRFDDALQPWENDHHGLPERIASPLSIMIDGPIGGAAFNNEFG FT RPNLLGYFRAFEQTAGGTRWGYHKPIMIAGGLGSIDAGLTHKEVIPPGALLIQLGGPGL FT RIGMGGGAASSISMGSNSAELDFDSVQRGNPELERRAQEVIDRCWQQGEHNPIVAIHDV FT GAGGLSNAFPELVNDAGRGAIFDLRRVPLEESGMSPAEIWSNESQERYVLSILPQDLER FT FDAIARRERCPYAVVGVATEERQLRVVDGEGLPGLDTIRAQGENEVRPVDVPIDVILGK FT PPRMTRDVQRLPGVSEPLDLAGLDLTEAAYRVLRHPTVANKSFLITIGDRTVGGLSSRD FT QMVGPWQVPVADCAVTLADFEGTRGEAMSMGERTPLAMLDAPASGRMAVAEALTNLAAA FT DVARLEDIKLSANWMAACGVPGQDAALYDTVSAVSELCQSVGLSIPVGKDSLSMKTSWD FT EAGEQRQVVAPVSLIVTAFAPVGDVRASLTPQLRTDAGDTVLILIDLGRGRHRMAGSIL FT AQAYNQVGETVPDIDAPQDLRAFFVTIRTLAEAGTILAYHDRSDGGLFATLAEMAFAGR FT TGVSVNLDMLTFDPQSADWGDYKIRPEQVAVQREELTLKALFSEEAGAVIQVPASQRDA FT VMQVLRGAGLSAHSHVIGGLNGADEVEFYRDGRKVWSQPRADLGRAWSEVSYRIMARRD FT NPACAQAELDIWNDAKDPGLAPRVAFDPQEDVAAPFIATGKRPRVAILREQGCNSQVEM FT GWAFDTAGFEAIDVHMTDLLSGRIDLAGMQGLVAVGGFSYGDVLGAGEGWARTIRYNDK FT LSDQFAAYFARPDTFALGVCNGCQMMAALAPMIPGAEHWPRFTRNQSEKYEARLSLVEV FT TASPSIFFAGMEGARIPVAVAHGEGYADFTQQGDAGRALMAARYIDNHGAATETYPFNP FT NGSPGGLTAVTTADGRFTVMMPHPERVTRNVMMSWAPAQWGERDAGGAFSPWMRIFRNA FT RAWLK" FT misc_feature 14404..14970 FT /note="HMMPfam hit to PF00586, DE AIR synthase related FT protein, N-terminal domain, score 1.9e-11" FT misc_feature 14998..15480 FT /note="HMMPfam hit to PF02769, DE AIR synthase related FT protein, C-terminal domain, score 5.9e-38" FT misc_feature 16210..16725 FT /note="HMMPfam hit to PF02769, DE AIR synthase related FT protein, C-terminal domain, score 1.8e-16" FT CDS 17954..27574 FT /transl_table=11 FT /gene="fhaS" FT /locus_tag="BB2312" FT /product="adhesin" FT /note="ortholog of Bordetella pertussis (BX470248) BP2667" FT /db_xref="GOA:Q7WK28" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/TrEMBL:Q7WK28" FT /protein_id="CAE32808.1" FT /translation="MNAFCFRLVYSQCRAMYVPVALRRRAARRGCGGAGRRLRRALAAA FT GVALACGAMAAPQRSPSGVPVIDIAAPNAHGLSHNRLRELDVEPPGLVFNNSLTEGRSQ FT LAGHLNRNPGLRQAATAILTEITGTRPSRLHGALEVFGRRADLIIANPNGISVNGLSTL FT NASNLTLTTGRPSVNGGRIGLDVQQGTVTIERGGVNATGLGYFDVVARLVKLQGAVSSE FT QGKPLADIAVVAGANRYDHATRRATPIAAGARGAAAGAYAIDGTAAGAMYGKHITLVSS FT DSGLGVRQLGSLSSPSAITVSSQGEIALGDATVQRGPLSLKGAGAVSAGKLASGGAVRV FT AGGGAVKIASASSVGSLAIQGGGKVQATQLNAGGPLQVSSRQAVRLGAASSGQTLSVRA FT GAALQADQLSATRRLGVDGKQAVTLGSVASDGALSVSAGGNLQAKQLVSNAGLDVRGQR FT EVSLEAASSVRGMTVAAAGTLAARNLQSQGAIRIQGGQAVSVANANSDAELHVSGRGQV FT DLGDLSAARGADITGEQRVSIGRAHSDGDVNVAARGALSIDSMTALGAIGVQAGDSVSA FT KDMRSRGAVTVSGGGSVNLGDVQSDGQVRATSAGAMTVRDAAAAADLALQAGGALQAGF FT LKSAGAMTVNGRDAVRLDGAQAGGQLRVSSDGQAALGSLAAKGALTVSAARAATVAELK FT SLDSISVTGGERVSVQSVNSASRVAISAHGALEVGKVSAKSGIGIEGWGAVAADSLGSD FT GAISVSGRDAVRVDHARSLADISLGAEGGATLGAVEAAGSIDVRGGSTVAANSLRANRD FT VRVSGKDAVRVTAATSGGGLHVSSGRQLDLGAVQARGALALDGGAGVALQSAKAGGTLH FT VQGGEHLDLGTLAAVGAVDVNGAGDVRVAKLVSDAGADLQAGRSMTLGTVDTTGDLQAR FT AQQALELGSVKTEGGLQAAAGGALSLAAAEVAGALELSGHGVTVDRASAGRARIDSTGS FT VGIGALKAGAVEAASPRRARRALRQDFFTPGSVVVRAQGNVTVGRGDPHQGVLAQGDIV FT MDAKGGTLLLRNDVLTENGTVTISADSAVLEHSTIESKISQSALAAKGDKGKPAVSVKV FT AKKLFLNGTLRAVNDNEETMPGRQIDVVDGRPQITDAVTGEERKDESVVSDAALVADGG FT PIVVEAGELVSHAGGIGNGRNKGDGADVTVRTTGNVMNKGYISAGKQGVLEVGGTLTNE FT FLVSSDGTQRIEAQRIENRGTFQSQAPAGTAGALVVKAAEAIVHDGVMATEGEMQIPGK FT GGRSPAVTAGAKATTSANKLSADVASWDNAGSLDIKKGGAQVTVAGRYAEHGKVSIQGD FT YTVSADAIALAAQITQRGGAADLTSRHDTRFSNNIRLMGPLQVSAGGAVSNTGNLIVRE FT GVRVTAASFDNEAGAEVMAKSAALTTSGAVRNAGKMQVKEAATIVAASVSNPGTFTAGK FT DLTVTSRGGFDNDGKMESNKDIVIKAEQFSNAGILDAKHDLTVTASGQADNRGSLKAGH FT DFTVQAQRIDNSGTMAAGHDATLKAPHLRNTGQIVAGHDIHIINSAKLENTGRVDARND FT LVLDVEDFTNTGSLYAEHDATLTLAQGTQRDLVVDQDHILPVAEGTLRVKAKSLTTEIE FT TGNSGSLIAEVQENIDNKQAIVVGKDLTLSSAHGNVANEANALLWAAGDLTVKAQNITN FT ERAALIEAGGNARLTAAVALLNKLGRIRAGEDMHLDAPRIENTAKLSGSIQPKGVHYVG FT GGKYGRWSGIGYVNYHLSSGSGAIAAPWYDSDLTAEQSLIEVGKDLYLNAGARKDEHRH FT LLNEGVIQAGGHGHIGGDVDNRSMMRTVSAMEYFKTPLPLSMTDIFHNLAPSPLTLTAV FT DNRAGLSPASWNFNSTYELLDYLLDQNRYEYIWGVYPTYTEWSVNTLKNLDLGYQAKPA FT PTAPPVPKVPTLDLRGHKLESPEGLKIYGEYKKLQGEYEKAKAAAQAVEAYGEATRRVH FT DQLGQRYGAALGGMDTETQAVDGIIQAFAADLRTVYAKQADQASIDAETDKVAQRYKSQ FT IDAVRLEAIQPGRVMLAKALSAALGADWRALGHAELMQRWKDFKAGKRGADIAFYPKEQ FT TVLAAGAGLTLSNGAVHNGENAAQNRGRPENLKIGAHSATSVGGSFDALRDVGLEKRLD FT IDDALAAVLVNPHIFTRIGAAQASLADGAAGPALARQARQALGTDGIVDARGLGSADAL FT ASLASLDAAQGPEVSGKRNAQVADARLAAPNAVAAPAGGAVRVAPPAVALPRPLFETRI FT KFIDQSKFYGSRYFFEQIGYQPDRATRVAGDNYFDTTLVREQVRRALGGYESRLPVRGD FT ALVARLMASAGTVGKALGLKVGVAPTAQQLKQADRDFVWYVDTVIDGQKVLAPRLYLTE FT ATRQGITDQYAGGGALIASGGDVNVDTNGHDVSSVNGLIQGKRVKVDAGKGRVLVADSK FT GMGSGIEADEEVDVSGRDIDIEGGKLRGKDVRLKADTVKVATSMRYDGKGRLAARGDGA FT LDAQGGQLHIEAKRLETAGATLKGSKVKLDVDDVKLGGVYEAGSSYENKSSTPLGSLFA FT ILSSTTQTNQSARANHYGTRIEAGTLEGKMQNLEIEGGSVEAAHTDLSVARDARFKAAA FT DFEHAEHEKDVRQLFVSGTVGAGGYQATGTLGSETGASSYAGRGAAASASGRIGWESTW FT EQSTSSRKKYRNADLRLGDGSVVAGGVLDFGGADVNRDRYGGGAEGGSGLRLRGGEVRT FT TKYVDTESTVRSGGRVGLELGVDASVNPQVTASRLGQSLAQTGDGRGIDGGLMFGQALS FT TVFQSVMADTANSTLSMSLQGDWWNERRSATSENVTHVGGNVRIESGAGDMTLAGVRFD FT GGREVDLRSAGALRMRSAESREQRTRDAHSLSLDARMTMGANLVKADAYVRGTVGLSGR FT HEHEASERRTHDQTGIRAANVRLQAARDLVMQGARVDAAQSAQVEVGGTLSMASVQDVH FT DESRTSASWMLAAGAHASSGNGFKPQPVVQVAASFSHGHDRGAVVAQRTGIAAGGPLSV FT RVAGDAHLTGADLASADRQGSVQVGGRVRAGQLADWRDRDGGSAGVSAPAILSTSTRPT FT LVVSGGRLARDHYAATQRSVIAVAPDGFTAAGGVSGHLQRDPAAGREVLRDEHWAGGDM FT AFTLGSVPKFDRGRYAPPRPDTSVPGGSPFSLHR" FT misc_feature 17954..18118 FT /note="Signal peptide predicted for BB2312 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.771) with cleavage site FT probability 0.771 between residues 55 and 56" FT misc_feature 18074..18106 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 21212..21277 FT /note="Predicted helix-turn-helix motif with score 996.000, FT SD 2.58 at aa 1087-1108, sequence ISQSALAAKGDKGKPAVSVKVA" FT CDS 27667..29139 FT /transl_table=11 FT /locus_tag="BB2313" FT /product="putative peptidase" FT /db_xref="GOA:Q7WK27" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q7WK27" FT /protein_id="CAE32809.1" FT /translation="MNARIPDDALPPALDPDALQAFVDDKWDNEIIPALTDYIAIPAKS FT PAFDADWEKNAFIERVVRDAAQWVESQKVSGLTLEVVRLPGRTPVIFFDAPATRADNGD FT TVLLYGHLDKQPEFSGWRADLGPWTPKYENGKLYGRGGADDGYAIYASLTAIMALDKQG FT IPRPRCVGIVETCEESGSYDLLPYVDVLRERLGNVALVVCLDSGAGNYDQLWMTTSLRG FT MVAGTLEVQVLDEGVHSGDSSGVVPSSFRILRHLLDRLEDSASGRLLPQSLHCEIPAER FT IEQVHATARILGDEVWRRFPWSCGAEGGFVLPMTTEPEEALLNRTWRPTLSVTGAEGLP FT PLTSAGNVLRPRTAFKLSLRLPPLVDAVAAAQEIKGLLENDAPYNAKVIFHANEGAATG FT WNAPASASWLSQALDAASQQYYGAPCGYIGQGGTIPLMSMLQKGFPKAQFMVCGVLGPK FT SNAHGPNEFLHVPYGKKLTAAVAQTMAALPTE" FT misc_feature 27769..28965 FT /note="HMMPfam hit to PF01546, DE Peptidase family FT M20/M25/M40, score 1.9e-10" FT CDS 29173..29724 FT /transl_table=11 FT /locus_tag="BB2314" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009858" FT /db_xref="UniProtKB/TrEMBL:Q7WK26" FT /protein_id="CAE32810.1" FT /translation="MIVDVQTGAAVAAEVRLWVDKAVIGLNLCPFAKAVQAKGQVRYAV FT SDATDAEGALSDLEDELMRLSQTDPQEIDTTLLILPDALDDFYDFNDFEDLSDRLLKRM FT RLVGELQVATFHPRFQFAETGPDDIENYTNRSPYPILHLLREASIDKAVEAFPDAAEIY FT EKNIETMRELGEEGWRKLME" FT CDS complement(29839..31131) FT /transl_table=11 FT /locus_tag="BB2315" FT /product="putative acyl coenzyme A thioester hydrolase" FT /EC_number="3.1.2.2" FT /db_xref="GOA:Q7WK25" FT /db_xref="InterPro:IPR014940" FT /db_xref="UniProtKB/TrEMBL:Q7WK25" FT /protein_id="CAE32811.1" FT /translation="MPPRMSVAPERALIDVDREIRIDGFGPYACIDVTAEMRMCGVPWR FT SRATFLAGADGSLDLGRDSPVSGDYAEPDAMGLVWSMQCQDPPRAVFPPDRTDALTVHI FT TASDGRHEAHATLVQEFLAEGVRHQAVRARAGGMSLSGELYTPPGPGPHPAIIYMNGSS FT GGVNAPRAALFAARGYQCLALGVFNYEDRPKYLNDMPLEYLEQALRWVRDTLNPRDGFV FT AISGISRGGEMSLLAASHFPELVSAVVAYVPSPVMHGVVSAGAPGTGRDAQVWTLGGKP FT LPHLWQDNATADWEAAYASDPPYRQTHAFMSASRDARAFERARIPIERYPGPLMLISAS FT DDGFWPSTAYSEIVARQRQAAWPARPAEHYVCRGAGHHVHYPNLPATLISKPHAMSGLL FT LDAGGTPPANAHGNAGSYRAMLDFLERARAS" FT CDS complement(31143..32129) FT /transl_table=11 FT /locus_tag="BB2316" FT /product="putative exported protein" FT /db_xref="GOA:Q7WK24" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q7WK24" FT /protein_id="CAE32812.1" FT /translation="MRLTRRHVLQALAALPFAVRPSWAQDAYPSRPIRLLVGFAPGGLT FT DIAARALAERMSKAMNASVVVENRPGGQAIIATVAVARAEPDGYTLGFAGTNGMILNPL FT LYNNLPYKQADFKQLGSMGKSPMLLIVHPDLGVRNVQEFIALARQKPGEITCAHAGRGI FT INHLALLHFQSKTGTQFQDVPYKGSGPALLDLMAGTVKSTFDFPTSSIANLRAGKYKAL FT AVTADQRLSSLPDVPTMKEAGLDGFELYTRMMISGPAAMPAQVVGKLEKAVRAGTADPG FT LIQQFADQGVTIEFTSAADMDRVIAEESAMWEQVIKANNVPRTDLKS" FT misc_feature complement(31167..31988) FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 4.5e-82" FT misc_feature complement(32058..32129) FT /note="Signal peptide predicted for BB2316 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 24 and 25" FT CDS complement(32327..33163) FT /transl_table=11 FT /locus_tag="BB2317" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q7WK23" FT /protein_id="CAE32813.1" FT /translation="MSNTHEVRPGQSIELLKALHILTRDGKMNQDSRRKLKQVYHLYQF FT IEPLLQNARDARGAVTLVDHGAGKSYLGFILYDLFFKDRRDASHIYGIETRAELVQSAT FT ELAARLGFGGMSFLNLSVADSIASEQLPPRVDIVTALHACNTATDDAIRFALAKQAQSI FT VLVPCCQAEVAAVLRKNKARALADPMAELWRHPLHTREFGSQLTNVLRCLQLEAHGYQL FT SVTELVGWEHSMKNELIIARHQPGRPRREPARRLREMLERIGLQELSERFQVPAQP" FT CDS 33455..34252 FT /transl_table=11 FT /locus_tag="BB2318" FT /product="probable membrane protein" FT /db_xref="GOA:Q7WK22" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:Q7WK22" FT /protein_id="CAE32814.1" FT /translation="MAGGFLGILIGLTLGLTGAGGGILAVPALVLGLGMDMPQAAPVAL FT MAVGLAAAVGSAEGLRRGTVRYKAAALMSVVGGLAAPWGAQLARLAPGPWLSGLFAMVM FT LLVAGRMLRQSLAAPAGAQTQAERPCHISPQTGKFVWTPRAAATLGGIGAISGLFTGLL FT GVGGGFIIVPALRQFSDAPMHAIVSTSLMVIALISAVTVGHAVADGLTLDAAAWTFVAA FT AVLGMVLGRALAPRLPTARLQQLFALVCVVVAGVLLWRTGWQA" FT misc_feature 33455..33529 FT /note="Signal peptide predicted for BB2318 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.666) with cleavage site FT probability 0.446 between residues 25 and 26" FT misc_feature join(33467..33535,33563..33622,33659..33727,33902..33970, FT 34007..34075,34085..34153,34187..34243) FT /note="7 probable transmembrane helices predicted for FT BB2318 by TMHMM2.0 at aa 5-27, 37-56, 69-91, 150-172, FT 185-207, 211-233 and 245-263" FT misc_feature 33701..34228 FT /note="HMMPfam hit to PF01925, DE Domain of unknown FT function DUF81, score 8.5e-07" FT CDS 34249..35064 FT /transl_table=11 FT /locus_tag="BB2319" FT /product="putative thiol:disulfide interchange protein" FT /db_xref="GOA:Q7WK21" FT /db_xref="HSSP:1LU4" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q7WK21" FT /protein_id="CAE32815.1" FT /translation="MSAMVQLGPLMLPTALLLMLACVAAGSLAARWRAGSAGAGEMPLM FT RVLLAGLLAARLAFVWRHREAYLQSPWDVLDIRDGGWLAWAGFAGAWACGLWFARRRGP FT RRRPLLAGLAAATLAWTVGAAVLGIGAPAAIKAMPPLQLATPDGAPRSLAAFAGQPVVL FT NLWASWCPPCRREMPMLQRMQAARPDVHFVFVNQGESAQQVNAYLRELGMPLRNVLLDP FT GAQAGAYFGHRALPATLFFDAQGRLVDTRLGELSQASLVQRLGALRPAP" FT misc_feature 34249..34320 FT /note="Signal peptide predicted for BB2319 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.338 between residues 24 and 25" FT misc_feature join(34276..34344,34378..34431,34489..34545,34582..34650) FT /note="4 probable transmembrane helices predicted for FT BB2319 by TMHMM2.0 at aa 10-32, 44-61, 81-99 and 112-134" FT misc_feature 34282..34314 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 34732..34788 FT /note="PS00194 Thioredoxin family active site." FT CDS 35094..35930 FT /transl_table=11 FT /gene="dsbG" FT /locus_tag="BB2320" FT /product="thiol:disulfide interchange protein precursor" FT /db_xref="InterPro:IPR018950" FT /db_xref="UniProtKB/TrEMBL:Q7WK20" FT /protein_id="CAE32816.1" FT /translation="MSDPILPRAAAGLRRACAVLAGAVLAAGAAQAQQPPAPVAALAQH FT GIEILGTFPAPGGLTAWAAHAGDRPVALYATPDGKHVIVGTMFDAEGRDVTQAALEQAI FT EPALSDKLWSALEQSAWVADGKAGAARIVYVFTDPNCPYCNKLWADARPWVEAGKVQLR FT HIPVGILTASSEGKAAAILAAPDPAKALHDHEAGHVASNTRALAAGERKPLDERGIQPL FT ADIPAEIAARLNANETLMAQWGLRATPAIVWREQGGRVRKRTGAPPALLPQLFGAL" FT misc_feature 35094..35189 FT /note="Signal peptide predicted for BB2320 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.989 between residues 32 and 33" FT CDS 35927..36244 FT /transl_table=11 FT /locus_tag="BB2321" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR014865" FT /db_xref="UniProtKB/TrEMBL:Q7WK19" FT /protein_id="CAE32817.1" FT /translation="MMTAAPCVRVLLHAPTAGALERARNNAANLLKEAPGAQVRIVANA FT AAVAAALDAPPHPADAHTWLCPNTLARLERPARAPLRALPQAAVLALALLQEEGWRYIR FT A" FT CDS complement(36705..37379) FT /transl_table=11 FT /locus_tag="BB2322" FT /product="hypothetical protein" FT /db_xref="GOA:Q7WK18" FT /db_xref="InterPro:IPR001357" FT /db_xref="UniProtKB/TrEMBL:Q7WK18" FT /protein_id="CAE32818.1" FT /translation="MGWLTDNFGAPATATSEVEAAPAYHIYRAHAVQARQVDELIGLVK FT GVLADGAICQEEVAFLLRWMQTNQDASNKWPAKALYPRIAAALADGHMDAMEEAEIMAL FT LLATVGSEDATGQPAINKSTALPLCSPVPDIHFDAHTFCFTGKFTSGTRDWCSQQVVER FT GGSSLSNVTKKLDYLVIGELGNPDWLHSTFGLKIKKAVDYRSSGVALRIISEQAWYEHL FT LS" FT CDS 37692..38819 FT /transl_table=11 FT /locus_tag="BB2323" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2629" FT /db_xref="GOA:Q7WK17" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q7WK17" FT /protein_id="CAE32819.1" FT /translation="MDATLHADADAITQLLYDGIVDSGDWYAGVELLRARMGAAFFHQM FT TVDCANGAVSDGLATFEAPQDKAREYEQHYARTDERMHAVLAMPAGSMVIDHERFDTSA FT MSSSAIYSDWLPSVGLRHTVGLTLREDGSRKEVIGIMRAREDGMFRASEIALCQRALPH FT LARASALRARVAGLQDRAGFGLAALDALRQGIVVLDAQAAVQYANPAARALAAAGALCR FT VRHDTWRFADAPVQARFQQALAGACARGEPSCAGAFMVHTPQGPVAVSVLPLKAGHPLL FT AWRGVPLAMLSIGAGAQTDVAPPDLLRQALGVTLAEARLAHALAQGLTVKGYALRADLS FT EQTVRGHLKNLLRKTDCHRQVELVTLAQSVQAPPE" FT misc_feature 38619..38813 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00196, DE Bacterial regulatory FT proteins, luxR family, score 0.0017" FT misc_feature 38673..38738 FT /note="Predicted helix-turn-helix motif with score 993.000, FT SD 2.57 at aa 328-349, sequence LTVKGYALRADLSEQTVRGHLK" FT CDS 39069..41225 FT /transl_table=11 FT /locus_tag="BB2324" FT /product="autotransporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP2627" FT /db_xref="InterPro:IPR014262" FT /db_xref="UniProtKB/TrEMBL:Q7WK16" FT /protein_id="CAE32820.1" FT /translation="MKKQVVEYVRCGVPRLRPVMASLALAACHGLASAAPALPPATVGM FT GMHQLAVPMGTTFIPMAMSSDATVLAGTGSVPGLGPHAAMWPLSNPFPYYVIAGDRSSF FT HALSQDGSVGVGVVVSGGLSQAVRWDNGSWFQPLGVGTDGATQSYASGVSADGSVVVGW FT LTWDGAGERRPFRWTQATGVQTLSGFESYSFALASGISADGKVVVGDVYTDGALITPNA FT YRWTATDGIDLLPHVAGGTSSRAAATNSDGSVVVGTAYGSSFGGARAFRWTQAGGSANL FT GTIAGGEAGQSFASAVNADGSVVVGYVDRTGIGLLTEQSAFRWTQAGGMLTVEQWLRGH FT GYTIADGQTWRALAVNADGTIVMGMMQNGDTFVARTPADKVPDPVSPGGGEPAPQPGGQ FT PGSQPGGGGLITLREFASSLGGTAALPASLTSSTDMLLHGAHGSPLRSLVPAGKVGMWT FT TGDWGRTEHGGQDGIAAVGEAGLSYRFNEQVQLNLAVGGGNMRQYLEYDGKSTARQTYV FT MPELLWNLPSTPLWLTASALYADGDLNVRRGYPNAGVDDRSSGKASLRTTAARLRLDWR FT DALAWERAALTPYLDYSYIRTRVGSYTEHGGGFPARWDARTDHANVARLGVDATVQVGG FT NVQLLGTVEASHRFESHNSGASGQVIGLMPFELDGASTQRNWLRFGAGVQAPVGPGTAT FT LMLNTTTHSSMPSYWLAATYRLAF" FT misc_feature 39069..39170 FT /note="Signal peptide predicted for BB2324 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.991) with cleavage site FT probability 0.944 between residues 34 and 35" FT misc_feature 39120..39152 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 40386..41219 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03797, DE Autotransporter FT beta-domain, score 0.00042" FT CDS complement(41222..41833) FT /transl_table=11 FT /locus_tag="BB2325" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2626" FT /db_xref="InterPro:IPR018715" FT /db_xref="UniProtKB/TrEMBL:Q7WK15" FT /protein_id="CAE32821.1" FT /translation="MTTPMPVYTAFAGHALLAAGPLAEVALAARRAADGDAGAAVFIYE FT DATGRAIDVDTRGTDAEIVARLPLPTPVEPEAEAEPEGSPARPRGRGRPRLGVVAREVT FT LLPRHWDWLAGQPGGASVALRKLVEQARREHAGADALRRGRDAAYTFMSAAAGNLPGFE FT EAVRALYAGDAERLAAHMAGWPADVRAYALRLAGAADLPA" FT CDS 42056..43516 FT /transl_table=11 FT /gene="guaB" FT /locus_tag="BB2326" FT /product="inosine-5'-monophosphate dehydrogenase" FT /EC_number="1.1.1.205" FT /note="ortholog of Bordetella pertussis (BX470248) BP2625" FT /db_xref="GOA:Q7WK14" FT /db_xref="HSSP:1EEP" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q7WK14" FT /protein_id="CAE32822.1" FT /translation="MRLVQKALTFDDVLLVPAYSEVLPRDTSLTTRLTRNITLNIPLVS FT AAMDTVTEARLAIAMAQEGGIGIIHKNLSADDQAKEVARVKRHEFGIVIDPVTVTPDMK FT VRDAIALQRQHGISGLPVVEGRKLVGIVTNRDLRFEDRLDQPLRNIMTPQDRLVTMKEG FT ATLDEAQALMHKHRLERVLIVNDAFELRGLATVKDIVKNTEHPYACKDSQGQLRVGAAV FT GVGAGTEERVEKLVAAGVDVIIVDTAHGHSAGVLERVRWVKQNYPKVEVIGGNIATAAA FT ARALVEAGADGVKVGIGPGSICTTRIVAGVGVPQISAISDVAKALEGTGVPLIADGGIR FT YSGDVAKALAAGAFACMMGGMFAGTEEAPGEVVLFQGRSYKSYRGMGSLGAMADGSADR FT YFQDPANNADKLVPEGIEGRVPYKGSVLAIIYQLVGGIRASMGYCGCASIDDMRTKTQF FT VEITSAGVRESHVHDVQITKEAPNYRAD" FT misc_feature 42056..42319 FT /note="HMMPfam hit to PF01574, , score 1.1e-56" FT misc_feature 42323..42481 FT /note="HMMPfam hit to PF00571, DE CBS domain, score FT 3.9e-12" FT misc_feature 42506..42667 FT /note="HMMPfam hit to PF00571, DE CBS domain, score 4e-09" FT misc_feature 42755..43423 FT /note="HMMPfam hit to PF00478, DE IMP dehydrogenase / GMP FT reductase, score 1.9e-122" FT misc_feature 42932..42970 FT /note="PS00487 IMP dehydrogenase / GMP reductase FT signature." FT CDS 43613..45205 FT /transl_table=11 FT /gene="guaA" FT /locus_tag="BB2327" FT /product="GMP synthase [glutamine-hydrolyzing]" FT /EC_number="6.3.5.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP2624" FT /db_xref="GOA:Q7WK13" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q7WK13" FT /protein_id="CAE32823.1" FT /translation="MHQRILILDYGSQVTQLIARRVREAGVYSEIHAGDVDDAFVRDQV FT AQGLKGIILSGSHASAYEEGSMRVPAAVFEVGVPVLGICYGMQSMAQQLGGTVSFSDHR FT EFGYAEVRAHGHTKLLDGLADFTTDEGHGMLKVWMSHGDKVTELPPGFKLMASTASCPI FT AGMADEDRGFYAVQFHPEVTHTVQGKAMLARFVKDICGCEGDWNMPDYISEAVARIREQ FT VGSDEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLDEGKQVMQTFAENMGV FT KIVHVDATSQFMGKLTGVADPEAKRKIIGREFVEVFQDEAGKLQGAKWLAQGTIYPDVI FT ESAGAKTGKATSIKSHHNVGGLPDTLNLQLLEPLRELFKDEVRELGVALGLPPQMVYRH FT PFPGPGLGVRILGEVKHEYAELLRRADAIFIEELRNAKDPASGLTWYELTSQAFAVFLP FT VKSVGVMGDGRTYEYVVALRAVQTFDFMTADWAPLPHPLLARVSSRIINEVRGINRVVY FT DVSSKPPATIEWE" FT misc_feature 43628..44209 FT /note="HMMPfam hit to PF00117, DE Glutamine FT amidotransferase class-I, score 4.5e-37" FT misc_feature 43847..43882 FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT misc_feature 44819..45199 FT /note="HMMPfam hit to PF00958, DE GMP synthase C terminal FT domain, score 3.1e-64" FT CDS complement(45801..46490) FT /transl_table=11 FT /locus_tag="BB2329" FT /product="putative TetR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2621" FT /db_xref="GOA:Q7WK12" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q7WK12" FT /protein_id="CAE32824.1" FT /translation="MYDRIYSMMKNPVRANTPNPAMTQPAPAPTVDGRRLRGERARARV FT LDEAVKLLSIEGLDGITFGQVAERAEVGKSNLQVLFGDKERLQLAALDHAIALYQAQVI FT EPAMRKRTPLARLRALMNGWFDFVETRQLPGGCVITAASSEYRARPGPLRDAIRQYRDG FT ARARLRELIRQAKAQGQLAADTNEARLAMDLLAYQAFANVAASMDDAAEFKRAKAAVAQ FT MLAGGAG" FT misc_feature complement(46218..46358) FT /note="HMMPfam hit to PF00440, DE Bacterial regulatory FT proteins, tetR family, score 0.00015" FT misc_feature complement(46245..46310) FT /note="Predicted helix-turn-helix motif with score FT 1193.000, SD 3.25 at aa 61-82, sequence FT ITFGQVAERAEVGKSNLQVLFG" FT CDS 46503..47933 FT /transl_table=11 FT /locus_tag="BB2330" FT /product="probable membrane efflux protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2620" FT /db_xref="GOA:Q7WK11" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7WK11" FT /protein_id="CAE32825.1" FT /translation="MTDAMPPPNVERRHPWRALAVLLTGNFVTILDLFIVNVALPSIQQ FT GLSATDTDLQLVVVAYALAYGLCLINGARLGDLFGRRRLFMAGMGLFTLASALCGVAVT FT PWQLIAARALQGVGAGVLMPQVLASIRVLFEGEARRRAFGVMGAVQGVAATVSQLLGGV FT LITMNAFGLGWRLVFLINVPVGIAALLAGRRALPEWRAPVATKVDMWGALLGAVGLALI FT LVPVMEGREHGWPWWSLAGPVLALLVLGYFVHYEQGLVRRGGVPMLDMGLFANRPFVAG FT IGAVFFFFSAISSFFFALTLLLQFGLGMAPLAAGAVFTPSALAFFGASLVGPRLAARYG FT RGALLFGVLVFAAGVALSAVTAATQPHHLPLLVASLVLNGAGQGLAIPLAFNAILGAVR FT EEQAGMASGMLSTLQVVGTSVGVAVVGAVVFAALEAAGRWPAADGAMVYGRALAVAMVY FT NVAAALASWVLFRLATRR" FT misc_feature 46551..47813 FT /note="HMMPfam hit to PF00083, DE Sugar (and other) FT transporter, score 0.0093" FT misc_feature join(46557..46625,46668..46727,46761..46829,46839..46907, FT 46926..46994,47022..47090,47127..47186,47199..47267, FT 47331..47399,47427..47495,47532..47600,47628..47696, FT 47733..47801,47844..47912) FT /note="14 probable transmembrane helices predicted for FT BB2330 by TMHMM2.0 at aa 19-41, 56-75, 87-109, 113-135, FT 142-164, 174-196, 209-228, 233-255, 277-299, 309-331, FT 344-366, 376-398, 411-433 and 448-470" FT CDS complement(47966..49222) FT /transl_table=11 FT /locus_tag="BB2331" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7WK10" FT /protein_id="CAE32826.1" FT /translation="MKTSLASALPPCSGSAPAWSAGMPRGLVWLFAIASGLSVANVYYA FT QPLLDALARDFRISHAAIGGVVTATQIGCALALLLLVPLGDRMNRRRLMAMQLLALVGA FT LAAVGAARSAPALLAGMLAVGLLGTAMTQGLIAYAASAAAPHEQGRVVGAAQSGVFIGL FT LLARVFAGGVSDLAGWRGVYLCAAALMLALALPLWRWLPTLAAAPGAMRYPRLIASLLT FT LLREEKALQVRGMLALLMFAAFNIFWSALVLPLSAPPYGFSHTAIGAFGLVGVVGALAA FT ARAGQWADQGHAQRTSAAALAALLLAWWPLSLMEESLGALVIGILLLDLGGQALHVTNQ FT SLILRTRPQAHGRLVGLYMLFYAIGSGLGAIGTTAAYAHAGWRGVCLLGAAVSLLALLF FT WWATRRTGHPAAPYRASRP" FT misc_feature complement(join(48017..48085,48095..48163,48377..48445, FT 48455..48523,48617..48685,48713..48772,48809..48877, FT 48890..48943,48977..49045,49088..49147)) FT /note="10 probable transmembrane helices predicted for FT BB2331 by TMHMM2.0 at aa 26-45, 60-82, 94-111, 116-138, FT 151-170, 180-202, 234-256, 260-282, 354-376 and 380-402" FT misc_feature complement(49163..49222) FT /note="Signal peptide predicted for BB2331 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.985 between residues 20 and 21" FT CDS 49332..49778 FT /transl_table=11 FT /locus_tag="BB2332" FT /product="putative transcriptional regulator" FT /db_xref="InterPro:IPR002577" FT /db_xref="UniProtKB/TrEMBL:Q7WK09" FT /protein_id="CAE32827.1" FT /translation="MPPRKPMNDEPCPVARCVDLIGDRWSLLIVRDAFDGARRFGDFQR FT GLGVARNILSDRLRKLVEAGVLEMQDASDGSAYQEYVLTARGESLFPVLVALRQWGERH FT LFERGERHSVLIDRRTGKPVAFMAPVAQDGTALAPAAAEVRKVK" FT misc_feature 49389..49661 FT /note="HMMPfam hit to PF01638, DE Transcriptional FT regulator, score 9e-22" FT CDS 49864..50943 FT /transl_table=11 FT /locus_tag="BB2333" FT /product="putative C4-dicarboxylate transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP2619" FT /note="Similar to Pyrococcus abyssi C4-dicarboxylate FT transporter, putative pab2393 SWALL:Q9V0I5 (EMBL:AJ248285) FT (339 aa) fasta scores: E(): 1.4e-10, 25.14% id in 350 aa, FT and to Methanococcus jannaschii hypothetical protein Mj0762 FT SWALL:Y762_METJA (SWALL:Q58172) (342 aa) fasta scores: E(): FT 1.1e-14, 25.46% id in 322 aa" FT /db_xref="GOA:Q7WK08" FT /db_xref="InterPro:IPR004695" FT /db_xref="UniProtKB/TrEMBL:Q7WK08" FT /protein_id="CAE32828.1" FT /translation="MSPRGPELAPSSAPANPGLLAGLSPASFGIVMATGIVSLACASLG FT LPSVGRWLFALNVLLYAVVWGLNLARLLRHPRRMRNDACDHGRAPGFFTAVAASGVLGG FT QCLLLADARGAAMWLEAVAVVLWVVLSYGIFAAVMVKRDKPRLEQGMSGGWLLAVVATQ FT ALVGLGALLAPGLGEAWQGRLALALLGLWLWGGVLYALLMSLIFYRIMFLPLSPTDLSP FT PYWINMGAMAISTLAGTLLLQQSHAWPLLQTVQPFVQGVTLLFWAGGSWWIPLLLVLGV FT WRHGLQRHPLRYEGLYWAMVFPLGMYAMATHHLALALEQAWLEPLARAFMWVALGAWTL FT AALGLLGALSQALRRPARA" FT misc_feature join(49921..49989,50017..50070,50131..50199,50209..50277, FT 50314..50382,50425..50493,50530..50598,50641..50709, FT 50746..50814,50842..50910) FT /note="10 probable transmembrane helices predicted for FT BB2333 by TMHMM2.0 at aa 20-42, 52-69, 90-112, 116-138, FT 151-173, 188-210, 223-245, 260-282, 295-317 and 327-349" FT misc_feature 49930..50817 FT /note="HMMPfam hit to PF03595, DE C4-dicarboxylate FT transporter/malic acid transport protein, score 4e-06" FT CDS complement(50981..52207) FT /transl_table=11 FT /gene="opdE" FT /locus_tag="BB2334" FT /product="putative transporter" FT /note="Similar to Pseudomonas aeruginosa transcription FT regulatory protein OpdE or pa2219 SWALL:OPDE_PSEAE FT (SWALL:Q01602) (402 aa) fasta scores: E(): 9.5e-112, 77.09% FT id in 393 aa, and to Xylella fastidiosa transcriptional FT regulator xf1749 SWALL:Q9PCM9 (EMBL:AE003997) (409 aa) FT fasta scores: E(): 3.6e-122, 84.42% id in 398 aa" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7WK07" FT /protein_id="CAE32829.1" FT /translation="MATPLIDGPENADTSDHFQQKPTSWNGVFAMSVCAFALIASEFLP FT VSLLTPMARDLDVTEGMTGQGISISGAFAVLTSLFISTLAGSLNRKTLLLILTLAMGVS FT GAIVALAPNYFIYMLGRALIGVVVGGFWSMSAATAIRMVPTRDVPRALAIVNGGNALAT FT VVAAPMGAYLGTVVGWRGAFLCLVPVSLIALAWQWKTLPSMPAAARAPGAGNAFKVLTL FT FRHPGVAVGMLASSLLFMGQFSLFTYVRPFLEIVTGVHGATISLILLAIGAAGFIGTAL FT IGRVLQRRFYQTLIVIPLLMAATALALIVFGDVIGIVVALLALWGLTGTSAPVGWWAWI FT AKVFPEDAEAGGGLFVAVVQLSIALGSTVGGLLFDRSGYQSAFVMSAVLLTVCAMLTAL FT TARKLAAHA" FT misc_feature complement(50987..52129) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00083, DE Sugar (and other) FT transporter, score 0.0054" FT misc_feature complement(join(51005..51073,51086..51154,51191..51259, FT 51272..51331,51350..51418,51461..51529,51620..51679, FT 51689..51757,51776..51844,51857..51925,51944..52012, FT 52070..52138)) FT /note="12 probable transmembrane helices predicted for FT BB2334 by TMHMM2.0 at aa 24-46, 66-88, 95-117, 122-144, FT 151-173, 177-196, 227-249, 264-286, 293-312, 317-339, FT 352-374 and 379-401" FT CDS complement(52226..52357) FT /transl_table=11 FT /locus_tag="BB2335" FT /product="hypothetical protein" FT /note="Similar to the C-terminal region of Xylella FT fastidiosa hypothetical protein Xf1750 SWALL:Q9PCM8 FT (EMBL:AE003998) (378 aa) fasta scores: E(): 2.4e-06, 71.87% FT id in 32 aa" FT /db_xref="UniProtKB/TrEMBL:Q7WK06" FT /protein_id="CAE32830.1" FT /translation="MIIPGAVHVDLYDGMDKIPLDRLTAFLRNNLAIQTQGPGRDIP" FT CDS complement(52427..52906) FT /transl_table=11 FT /locus_tag="BB2336" FT /product="putative exported protein" FT /note="Similar to Xylella fastidiosa hypothetical protein FT Xf1751 xf1751 SWALL:Q9PCM7 (EMBL:AE003998) (167 aa) fasta FT scores: E(): 3.1e-37, 69.75% id in 162 aa, and to Ralstonia FT solanacearum hypothetical protein rsc0630 rsc0630 or FT rs01532 SWALL:Q8Y1Q9 (EMBL:AL646060) (118 aa) fasta scores: FT E(): 1.1e-18, 52.13% id in 117 aa" FT /db_xref="UniProtKB/TrEMBL:Q7WK05" FT /protein_id="CAE32831.1" FT /translation="MKNLFALPMNRTRRKALALLAGLAAGAPARPALALAPRQEPAMKI FT RLTIAGQIASATLYDNATARDFASLLPLSLTMTDYDTIERVADLPRKLSTQGAPGGMAP FT MVGELTHYAPWCNLAIFIQPRAYARSLLPLGRIDEGLAIVSRSGPYEMRIERIEP" FT misc_feature complement(52805..52906) FT /note="Signal peptide predicted for BB2336 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.995 between residues 34 and 35" FT CDS 53014..53973 FT /transl_table=11 FT /locus_tag="BB2337" FT /product="LysR-family transcriptional regulator" FT /note="Similar to Pseudomonas aeruginosa putative FT transcriptional regulator pa2220 SWALL:OPRR_PSEAE FT (SWALL:Q01610) (306 aa) fasta scores: E(): 1.8e-95, 81.35% FT id in 295 aa, and to Xylella fastidiosa transcriptional FT regulator xf1752 SWALL:Q9PCM6 (EMBL:AE003998) (324 aa) FT fasta scores: E(): 1.9e-105, 83.75% id in 314 aa" FT /db_xref="GOA:Q7WK04" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WK04" FT /protein_id="CAE32832.1" FT /translation="MARRNLNDLLYFVTIAREGSFTRAAALLGVTQSALSQAISGLEAR FT LRIRLLTRTTRSVSPTAAGERLLNAIGHRFDEIESELDELTQLRDKPAGTVRITCGDHI FT LRATILPRLTPLVREYPDIKLEFDVNYGFRDIVADRFDAGVRLGDTIDKDMIAVPIGPP FT LRMAVVASPAYFEAHSTPGQPRDLLRHNCINMRMQSGRGVYAWDFLRRGRRLNVRVDGQ FT LIFNTTPPMVEAALAGLGIAALPEEEFAPHLENGSLVRVLEDWCEPFSGYFLYYPSRRQ FT PSPAFSLVLAALRYGEGSSGKAQLGGSLKKGRSRRKAD" FT misc_feature 53029..53208 FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 9.4e-26" FT misc_feature 53068..53133 FT /note="Predicted helix-turn-helix motif with score FT 1959.000, SD 5.86 at aa 27-48, sequence FT GSFTRAAALLGVTQSALSQAIS" FT misc_feature 53071..53163 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 53278..53907 FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 9.7e-40" FT CDS complement(53895..55304) FT /transl_table=11 FT /locus_tag="BB2338" FT /product="probable transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2611" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:Q7WK03" FT /protein_id="CAE32833.1" FT /translation="MFKRRLLRAALPLLLLSLGGFGAWLISLPSAPAGLASPPIAASET FT TALLASLAPTRRQRPLIAVVGINDATETTDYLVPTGILRRADVADVVTLATGPGPVRLF FT PALTVEADATLDAFDARNPAGADYVIVPAMSRDDDPAVLAWLREQARKGATIIGVCAGA FT KVVAAASLLDGKRATTHWYYLKELLGRHPSIRYVADRRVVADRGVVTTTGVTASMPMTL FT LLIEAIAGRHKARAVAQDLAIPAWDIRHASGAFALTRPFATTVLGNVLAFWNREQIGIE FT LRPGMDEVSLALAADAWSRTYRSQAVSYAQASGAIATRNRIRVIPDAAAADWPATRRID FT TYTDQAPAQTLDRTLRAIAGRYGAPTASVVAMQLEYPWRGASAATTALAVRSIHPDGFQ FT PTQKTTSSCSNRAPSSCISPSAMAACDTYQAAVRPTRRSTPAERPQSAFLRDRPFFSEP FT PNCAFPELPSP" FT misc_feature complement(54618..55124) FT /note="HMMPfam hit to PF01965, DE DJ-1/PfpI family, score FT 1.9e-13" FT misc_feature complement(55179..55304) FT /note="Signal peptide predicted for BB2338 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.370 between residues 42 and 43" FT CDS complement(55365..57092) FT /transl_table=11 FT /locus_tag="BB2339" FT /product="putative solute transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2610" FT /db_xref="GOA:Q7WK02" FT /db_xref="InterPro:IPR001902" FT /db_xref="UniProtKB/TrEMBL:Q7WK02" FT /protein_id="CAE32834.1" FT /translation="MASSPADTPHRNWLRWLPGLAVLKTYQAAWLPRDLAAGLVLTAML FT VPVGIAYAEASGVPGVYGLYATIVPLLAYALFGPSRILVLGPDSALAAPILAVVLSVSE FT GDPMRAVATASLMAIVSGLFCIILGLLRLGFITELLSKPIRYGYMNGIALVVLASQLPK FT LFAIPTDDGGPLRELWQLAQAVLDGRTNGYSLAVGSATLGLILLLKRFKRLPGILIAVV FT LATLAVSLFGLDGRGVQVLGEIPQGLPGFTIPWLSNADLARIVLGGCAVALISFADTSV FT LSRTYAARTHTRVDPNQEMVGLGVANLATGFFQGFPVSSSASRTPVAEAAGSRTQLAGV FT VGALAVAALLLAAPNLLRHLPSSAMAAVVIAAAIGLFEFKDLRRIFRIQQWEFWLSMLC FT FAAVVAFGAIPGICLAVVVAVLEFLWDGWRPHFAVLGRVPDLRGYHDLKRYPHAALIDG FT LVLFRWDAPLFFANAELFQQRLLEAVQASPTPVRRVVVTAEPVTSVDVTSADMLRELSH FT HLAESGIALHFAEMKDPVRDKLKRFELSEVFGADRFHPTVESAVDDYLKRPPQGTIDP" FT misc_feature complement(55413..55745) FT /note="HMMPfam hit to PF01740, DE STAS domain, score FT 4.7e-19" FT misc_feature complement(55812..56711) FT /note="HMMPfam hit to PF00916, DE Sulfate transporter FT family, score 7.5e-78" FT misc_feature complement(join(55833..55901,55962..56015,56025..56084, FT 56244..56312,56394..56453,56472..56531,56589..56657, FT 56694..56762,56844..56912,56931..56990)) FT /note="10 probable transmembrane helices predicted for FT BB2339 by TMHMM2.0 at aa 35-54, 61-83, 111-133, 146-168, FT 188-207, 214-233, 261-283, 337-356, 360-377 and 398-420" FT CDS 57204..58562 FT /transl_table=11 FT /locus_tag="BB2340" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2609" FT /db_xref="GOA:Q7WK01" FT /db_xref="InterPro:IPR011108" FT /db_xref="UniProtKB/TrEMBL:Q7WK01" FT /protein_id="CAE32835.1" FT /translation="MLTLTCLGGAGTVTGSKHLLRHGDTRLLVDCGLFQGLKNLRELNW FT QPLPVAPADIDAVVLTHAHLDHCGYLPRLVAEGFRGRIHATPATRDVAELILLDSANLQ FT EKDAEFANRKGYSRHAPALPLYRVVDAERALARFSDVALHRETALPGGATLTLRRAGHI FT LGAATAQIDIGGMRVVFSGDLGRYNDPVMHDPEDVRNADYLVIESTYGNRRHDAADPVE FT ALGAVIERTVLRGGTVVIPAFAVGRAQTLIHALWKLRQAGRLHNVPVYLDSPMATSATE FT LLARHASEHKLSAQDCEAACAAVTYVRDVEGSKALSANRYPKVIISASGMATGGRVLHH FT MAAFGADHRNTLLFAGFQAAGTRGRKLLDGATETRIYGQWMPVRAEVAELPMLSAHADS FT DELMRWLAGFQEAPRRVFIVHGEPQASQALRERIQRELNWQAIVPVQDRRYTL" FT misc_feature 57231..57887 FT /note="HMMPfam hit to PF00753, DE Metallo-beta-lactamase FT superfamily, score 0.0027" FT CDS complement(58582..59487) FT /transl_table=11 FT /locus_tag="BB2341" FT /product="probable AraC-family transcriptional regulator" FT /db_xref="GOA:Q7WK00" FT /db_xref="HSSP:1D5Y" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q7WK00" FT /protein_id="CAE32836.1" FT /translation="MDKTANPIPPGVSREPGVLCDGQSVIHAWRCGGVVLEAHTGMPTA FT LPRHAHDTYQIGITTRDPGEYLCEGRTWNAPPGSVILFHPGDVHSVVTVGVRNRRDTSL FT LMFVDPRQMQDIATSLRGVDCGLPVFDDLVIRDAAFIRRFADTHARTRAHANPLEQESR FT LLALLQCLVGGFSAGPIAPRPVARNRRKALLVRDYIDAHYRDTLSMAQLADVAHTSPYH FT LNRLFAREIGIPPHAYQTQLRVERAKRLLLRGTSITDAALSTGFFDQSHFTRYFKRIVG FT VPPRRYTSPAAWHPPRGQAG" FT misc_feature complement(58621..58749) FT /note="HMMPfam hit to PF00165, DE Bacterial regulatory FT helix-turn-helix proteins, araC family, score 3e-05" FT misc_feature complement(58636..58761) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature complement(58768..58905) FT /note="HMMPfam hit to PF00165, DE Bacterial regulatory FT helix-turn-helix proteins, araC family, score 3e-06" FT misc_feature complement(58804..58869) FT /note="Predicted helix-turn-helix motif with score FT 1463.000, SD 4.17 at aa 207-228, sequence FT LSMAQLADVAHTSPYHLNRLFA" FT CDS 59771..60760 FT /transl_table=11 FT /locus_tag="BB2342" FT /product="putative exported protein" FT /db_xref="GOA:Q7WJZ9" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ9" FT /protein_id="CAE32837.1" FT /translation="MSGNPSAHRPRRRALLALAGAAMIARPAIARSRFPDRSIRLVVPW FT LPGSAADNELRALAHVAGRDFGQSVVIENKAGASGILGAQMIAAEKRADGYLLTQMHTT FT AFRMTALMDKPPYDVMDDYSWIIQLVGYSYGTVVRADSRWKDWDGFVAYSKANPGKVTL FT GTAGVGTTQHITMMQVAKKLGVEWLHVPFRGGGDEAQALLGGQIDAVASSTYWAELVNA FT GKLRLLATFGVERVKRFPDVPTLRELGVDIAQIAPYGLVAPRGLDPDVKRVLHDGFRKA FT LYSPQHQAAIERLDMPLAYLNSEDYEQAAKALFREEVEAIRSLGIKNG" FT misc_feature 59936..60748 FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 2.8e-67" FT misc_feature 60149..60178 FT /note="PS00120 Lipases, serine active site." FT CDS 60786..61877 FT /transl_table=11 FT /locus_tag="BB2343" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJZ8" FT /db_xref="InterPro:IPR006992" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ8" FT /protein_id="CAE32838.1" FT /translation="MENALSTLPLTAPSAELPRFGPPHIPIREDWLDRQREEILDPGLP FT IVDAHHHLWDRPGQRYMFEDFLRDTGSGHNIRATVYVQCRSMYRLDGPAAMRPVGEAEF FT VNGVAARSASGMYGPMRACAAIVGYADLTLGAAVEEVLHALVRAAPDRLRGVRNMTAAH FT ASPAVAPGFGRVPEGLLSDARFRAGYARLAPLGLSYDVWAFHSQLAEVLDLARAYPDTA FT LIVNHAGGPLGIGPYAGQRDAVMRDWDHHLRALADCPNVALKLGGLGMHISGLRFHEQD FT MPPSSEALAEAWRPWIHTAIERFGAQRCMFESNFPVDKGMAAYAAVWNAFKRLARGATP FT RERQALFAGTAARLYRLPASVLA" FT CDS complement(61942..62928) FT /transl_table=11 FT /locus_tag="BB2344" FT /product="putative exported protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) FT fasta scores: E(): 5.2e-47, 43.97% id in 332 aa, and to FT Agrobacterium tumefaciens hypothetical protein atu4727 or FT agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta FT scores: E(): 1.5e-45, 44.23% id in 321 aa" FT /db_xref="GOA:Q7WJZ7" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ7" FT /protein_id="CAE32839.1" FT /translation="MLIPKTLAGFVVAAAVAMPALAQGGGAGPDNPLAGKTVRLLVGFS FT PGGTSDAVARIIAEKLGPLLEARIVVENKPGANGNIAAADVARARPDGLTWYLGSFNNP FT VNQAAGRKLPFDFLRDFAPVAMVAYAPNVLIVNNDLPAHSVADLVALAKSRPGELTFGS FT AGAGSSLHMAGELFKNVAGVNMVHVPYKGSAPAMTDLVGGHLATMFDNLPTAMTQIKAG FT TVRALAVTGGRRVNSLPDVPTVAETLPGFDVTSFFALYAPTGTPPAAIAAINAATNRAL FT ADPDLQRRFAEQGADPGPGTPQQLAALVRDEVVKWREVIVAGDIRLE" FT misc_feature complement(61954..62772) FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 7e-105" FT misc_feature complement(62863..62928) FT /note="Signal peptide predicted for BB2344 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.971 between residues 22 and 23" FT CDS 63230..64228 FT /transl_table=11 FT /locus_tag="BB2345" FT /product="putative exported protein" FT /db_xref="GOA:Q7WJZ6" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ6" FT /protein_id="CAE32840.1" FT /translation="MYPINLTRLKTALAATLAVAALAAAAPAAATDWTPDRPLRIVSPY FT AAAGTNDLLARLMAQKLGERLGKSIVVENRAGANGIIGAEYVAKMPGDGYTMLMGNSAT FT HGINPNLYAKLSYDADKDFTPIGLIASVPLLLVVGPKVEADSLQDLIALSKSRPGQISF FT ASSGVGSSPQLAGELFKSISGLDIIHVPYKGDSPALTDVLGGQVTMMFANIPSALPMVR FT AGKLKALAMTGAARTSAAPEIPTMAEAGLPGVEISAWYGLMAPAGLPSPVLARLNTELN FT AVLQQPDVQTRIRELGAEPAQPGPPAQFQQFVDAELAKYGKVIKTAGIAPE" FT misc_feature 63230..63319 FT /note="Signal peptide predicted for BB2345 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.883 between residues 30 and 31" FT misc_feature 63389..64216 FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 3.6e-113" FT CDS 64358..65611 FT /transl_table=11 FT /locus_tag="BB2346" FT /product="putative acyl-CoA transferases/carnitine FT dehydratase" FT /db_xref="GOA:Q7WJZ5" FT /db_xref="HSSP:1PQY" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ5" FT /protein_id="CAE32841.1" FT /translation="MSKGPLQGIRVLDFTRFLAGPYATMLMADLGADVVKIEEPGGDHT FT RTSGPYLDAATKDQDIGGFFNSLNRSKHGICIDLKSPGGRDLVLRMVKDVDVVVENFRG FT GVMEKYGLDYETLSRINPRLVYASVRGFGDRRTLGTHYPERPTVDLLVQAVSGIMGITG FT SADGQVYKIGPGVGDIFPGTMCLVGILAALQWRERSGEGQYVDTSMYDCMLSLCERMLY FT QHSYTGEIPGPMGNAHPFSAPYTMYPAADGNFVVAAPNDKFWRRIATAIGQPELGADPR FT FATRAARREHRGEIDDIMRAWSSVRKRDDVMAALLGHDVLAAPVNNAADIFADPEVRKR FT RMLVDIDPYPHAPRKVQVAGTPLKFTKTETQPQRRAPLVGEHTHDVLTRMFGLSAAEVA FT ALERDAIVSRREPESAGA" FT misc_feature 64580..65158 FT /note="HMMPfam hit to PF02515, DE CAIB/BAIF family, score FT 8.5e-64" FT CDS 65613..66758 FT /transl_table=11 FT /locus_tag="BB2347" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJZ4" FT /db_xref="InterPro:IPR002155" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ4" FT /protein_id="CAE32842.1" FT /translation="MSNRKTNPLYALKDRYAVVGVGTTPYGSFPELDEYGLGAWAFKNA FT IDDCGLDKNLVDGLGVCRVPSYTRMGEVLGLNPRWTLTLPAHGRMSGISIVEAVAALNA FT GLTDYVALIYTNIGRSRRVNYGGDESPNIWNPWGFTSPGAGHALMFQRHAQQYGTTGRD FT LAEVAMAFRHHACLNPDAVMKTPITIDDHENSRHIAAPLRLLDYCLINDGAVCLILTST FT ERARDLKRPPVRISGIGARETYVESSLPNFSSDFWYDALQDTAAEVYGMAGIGPQDVDA FT LMCYDNFSPTVLFSLEGMGFCGRGEGGAFVRDGRLKLGGGLPTNTDGGHLSNSYMQGWG FT LNAEAVRQARGDGGERQVPGCRVVQYVAATPCTRSIIYTAD" FT CDS 66782..67198 FT /transl_table=11 FT /locus_tag="BB2348" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002878" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ3" FT /protein_id="CAE32843.1" FT /translation="MTPGFPLPKPDVLSRPFWDFAQRGVLSLQRCRHCGDVHFPAAPVC FT PACLSEQQEWVPASGRGTLFSWCEFHKGYWDSVASLLPYRVAVIKLNEGPLLISNLVDV FT ADCAALRADAPVEVVFRPVSADINLPVFRLSHAC" FT misc_feature 66815..67189 FT /note="HMMPfam hit to PF01796, DE Domain of unknown FT function DUF35, score 3.6e-14" FT CDS 67214..68119 FT /transl_table=11 FT /locus_tag="BB2349" FT /product="putative 2-pyrone-4,6-dicarboxylic acid FT hydrolase" FT /db_xref="GOA:Q7WJZ2" FT /db_xref="InterPro:IPR006992" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ2" FT /protein_id="CAE32844.1" FT /translation="MNASAEPLLESQEPLSAYTPPAFEVPPGACDTHAHIFGPVSRYPL FT DPKRTFNPPRAGIDDYRRLLSTLGLERAVIVHSGAYGTDISVTRDALLASEGKWRGIAL FT VDRDVTRDALADMHAAGFRGVRFNFIFGHRNEEDDVLEIARRIAEFGWHIQLLVDARTL FT PDLLPLIRRLPVMVVIDHIGRMPTSAGIGDPGFQALLGLLRERRCWVKLSGANRMGDPT FT PPYASVVPFAHALVDAGADHLVWGTDWPHVREPGAIPDDGGLLNLLQLWVPDRRLRNAI FT LSDNPARLYGFAPGGKEPQP" FT CDS 68116..69468 FT /transl_table=11 FT /locus_tag="BB2350" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJZ1" FT /db_xref="InterPro:IPR005656" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ1" FT /protein_id="CAE32845.1" FT /translation="MTPTAIEKIAVFVAGFDPAGATPAARHVAARALYDTIAVAIAGAD FT EPASRLMMDYARGQSAPGMATVWATGDRLPVELAALVNGTMGHALDFDDVSSPLRGHPS FT VAIFPALMALGESRGVSGKALLDAYLAGFEVTIKLARAIVDDQYAKGWHSTPSIAAFGA FT TAACARLLGLDAARIAHAMGILVSQVAGTRQNFGTMSKPFQAGQANVMALRAALLAELG FT FDASMSAMDGPHGYTVLYADGQDIHAQFDTLGQLPLEIDAAGIEVKKYPLCYATHRAIQ FT GILDLRKQQSLAFAEVERVEVKTNYRATVPLIYDRPQTGLEAKFSMHYAVAAALHDGAV FT NLASFEDAAVRRPAIQAFFEKVELSQGEPPMFPRWAEVVVHLRDGVSHRIRVEGLRGSA FT QFPLSNAELVEKGADCLAHGKVALSAERLARACFELDAAPLQALLEVLRSA" FT misc_feature 68122..69444 FT /note="HMMPfam hit to PF03972, DE MmgE/PrpD family, score FT 1.7e-52" FT CDS 69480..71003 FT /transl_table=11 FT /gene="gabG" FT /locus_tag="BB2351" FT /product="succinate-semialdehyde dehydrogenase [NADP+]" FT /EC_number="1.2.1.16" FT /db_xref="GOA:Q7WJZ0" FT /db_xref="HSSP:1BXS" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q7WJZ0" FT /protein_id="CAE32846.1" FT /translation="MPGRGCVPRFFSSDSIDMTISPLQLLNDPSLLRTDALVDGRWIAA FT SRRFAVHDPATGRKLADVANLDAAHAREAIAAAQAAWPAWRARTVKERSAILRKWFDLL FT LANQDDLARLLTAEQGKPFGEARGEIAYAASFVEWFAEEAKRINGETLPAFDNNRRLLV FT LRESIGVCAAITPWNFPLAMITRKVAPALAAGCPVIVKPAEHTPLTALAAAQLAVRAGV FT PAGVLGVLPADGANSIAIGKELCANDAVRHLSFTGSTEVGRILMAQSAATVKKLSLELG FT GNAPFIVFDDADLDSAVEGAMQSKYRNAGQTCVCANRIYVQDGVYDAFVEKLADAVRAL FT KVGPGFDEGVTQGPLIEPEAVDKIERHIEDAVSKGGRVVAGGRRLGGLFFEPTVLVDAT FT SQMLCAREETFGPLAPVFRFHADEDAIAAANATEFGLASYLYSRDVGRIFRAAEALESG FT MVGVNVGILATEHVPFGGVKQSGLGREGGRHGIDDYVEIKYMCVGDILK" FT misc_feature 69600..70991 FT /note="HMMPfam hit to PF00171, DE Aldehyde dehydrogenase FT family, score 3.8e-192" FT misc_feature 70311..70334 FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT misc_feature 70395..70430 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT CDS complement(70996..71985) FT /transl_table=11 FT /locus_tag="BB2352" FT /product="probable LysR-family transcription regulator" FT /db_xref="GOA:Q7WJY9" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q7WJY9" FT /protein_id="CAE32847.1" FT /translation="MRQTPRKGLPRPVPAAPTIPAMDNIDIKLLRTLLVLMSERSVSRT FT ADRLDVSQPAVSHALARLRILFDDPLLLRSRAGMVPTDRASEIEARVRRLLAEYDALAH FT RPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLRAHAPNIRVEVRAPDPERAYELLES FT GEVDLRIAWLRKPAQSLRSMQLFQDRIVCIADRDHPALDGTLSLADFLRYPHARPWGMG FT RNMSGRVIDEAVELLGKKLAPPFLVQNFLTIPYTITGSDLLAVLPLVLARAFAAQQPIQ FT ILEVPLRLPRMRYGAYWHERSHKDVGHKWLRSVVLQAAQGLQAPPAAI" FT misc_feature complement(71026..71655) FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 8.1e-23" FT misc_feature complement(71728..71907) FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 3.2e-15" FT misc_feature complement(71773..71865) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature complement(71803..71868) FT /note="Predicted helix-turn-helix motif with score FT 1637.000, SD 4.76 at aa 40-61, sequence FT RSVSRTADRLDVSQPAVSHALA" FT CDS complement(71995..73056) FT /transl_table=11 FT /locus_tag="BB2353" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJY8" FT /db_xref="InterPro:IPR006992" FT /db_xref="UniProtKB/TrEMBL:Q7WJY8" FT /protein_id="CAE32848.1" FT /translation="MDIADPDAPPRYAPPEIPIRPGWLAMRREPVLEPGLPIVDAHHHL FT WDRPGQRYLFDELRADLQTGHNVLATVYVQCRSMYRCDGPAAMRPVGETEFANGIGAQS FT ASGLYGRLRACAGIVAYADLSLGAAVRPVLQAHLNAAPQRLRGIRCMTAAHASPHIQPN FT SGKVPEHLLMAPRFREGFAELAPLGLSYDAWAFHTQLHEVLDLARAFPQTVIVVDHAGG FT PLGIGPYAGRRDAVYAHWHAAMRALAACPNVNVKLGGLAMHFSGLDFHLLAEPPDSRQL FT AHAWRPYIEACIELFGAGRCMFESNFSVDKGMLSYAVLWNAFKRLAAQCSAQEKAQLFA FT GTARRVYRLPPQP" FT CDS 73250..74239 FT /transl_table=11 FT /locus_tag="BB2354" FT /product="putative exported protein" FT /db_xref="GOA:Q7WJY7" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJY7" FT /protein_id="CAE32849.1" FT /translation="MAFKQQLRGLLGSLAGGVLLALQPAAAEPTYPSRPIRLIVPFAPG FT GTTDAVARAVATKLGQALNQSIVVENRAGAGGSIGTDFVAKARPDGYTLLLGSAGPLSV FT NPTLYPNLPYDPTRDFTPVGMICTSALVLVTSSASGIASTADLIRQAKANPGSLTFSTA FT GVGGASHIAAELFASMAGIKATHVPYRGSGPATVAAVAGETSFTFTGQTAAWPMVQAGK FT LRALGVGSRERSAEHPEVPTVAESGPVPGYEALDWNVIMAPPGTPESVVRALSDGLDRI FT LDDPELRASFVQQGIAIRKGTAADVQALMRHDIAKWAKVIEEAGIETQ" FT misc_feature 73250..73330 FT /note="Signal peptide predicted for BB2354 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.775 between residues 27 and 28" FT misc_feature 73400..74227 FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 2.3e-97" FT CDS 74401..75471 FT /transl_table=11 FT /locus_tag="BB2355" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2607" FT /db_xref="UniProtKB/TrEMBL:Q7WJY6" FT /protein_id="CAE32850.1" FT /translation="MRHLLAGNQLRQSLLIAQPASVRVALVAGLQAGLAIFVALVSAHL FT SPWPHLVGFSALGGLAALFGRFASAQGRQRIVMVCGLLLVAGVLVPSLATYAGAGALSM FT VLLLALSAGLYTLAVWRWGLTGGPGAVIFVFAVGAALAPVDSAAAVVERTLATAWGALV FT AWLACALTDRLRPHGAVAMAAAPLPPLSLQLMVAGRIAVGAGAAALIIFWAGWQYPAWA FT AIGAAAVMQGTHLHLTMNRSLQRMAGTIVGACIVWAILAQDPSFWTLVAAVVLCQVITE FT VTIGFNYALGQVTVTPMALLMTYMASPAPASNMPVERVVDTIVGAAIGIVFAVIFSTVD FT DRVHLARRYRKLRIWR" FT misc_feature join(74461..74529,74539..74607,74626..74694,74704..74772, FT 74785..74853,74974..75042,75061..75114,75157..75225, FT 75244..75312,75355..75414) FT /note="10 probable transmembrane helices predicted for FT BB2355 by TMHMM2.0 at aa 21-43, 47-69, 76-98, 102-124, FT 129-151, 192-214, 221-238, 253-275, 282-304 and 319-338" FT misc_feature 74872..74904 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(join(75521..76570,76574..77002)) FT /pseudo FT /transl_table=11 FT /locus_tag="BB2356" FT /product="putative GntR-family transcriptional regulator FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2599" FT misc_feature complement(75860..75895) FT /note="PS00136 Serine proteases, subtilase family, aspartic FT acid active site." FT misc_feature complement(76763..76942) FT /note="HMMPfam hit to PF00392, DE Bacterial regulatory FT proteins, gntR family, score 5.7e-11" FT misc_feature complement(76811..76885) FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT misc_feature complement(76817..76882) FT /note="Predicted helix-turn-helix motif with score FT 1295.000, SD 3.60 at aa 41-62, sequence FT PSTRALAAELGVSRTTVTAVYE" FT CDS 77083..77706 FT /transl_table=11 FT /locus_tag="BB2357" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2598" FT /db_xref="InterPro:IPR007396" FT /db_xref="UniProtKB/TrEMBL:Q7WJY5" FT /protein_id="CAE32852.1" FT /translation="MYLPAHFAETRPEELARIIRAHPLGMLVTQDAQGLDADHLPFEFD FT PDAGPHGTLIAHVARANTLWQRCPDGSAVMVVFRGAEGYISPNWYPSKHEAHRQVPTWN FT YEVVHAHGTLAVRDDERFVRGVVARLTRRHEAGESRPWKMTDSTPEYIDSMLRNIVGIE FT VAITSLVGKRKLSQNKDERDRLGAVQALQARGQDALAQSMARAE" FT CDS 77737..78348 FT /transl_table=11 FT /locus_tag="BB2358" FT /product="putative membrane transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2597" FT /db_xref="GOA:Q7WJY4" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/TrEMBL:Q7WJY4" FT /protein_id="CAE32853.1" FT /translation="MSLLAFLLAAALLAITPGPGIAYVVARTVAGGRAEGLASCLGTAL FT GGLVHVLAAALGLSVLIAESALAFSLLKYAGAAYLVYLGLRMWLSPRPAAVRVVAPQGA FT RRALAEGVLVEALNVKTALFFLAFLPQFVDPGAPLAPQLALLGGICVTLNTLVDVMAVV FT AAHRLLRSEAARVARARVLTRVSGTTMVGLGVFLALARRD" FT misc_feature 77737..77802 FT /note="Signal peptide predicted for BB2358 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.905 between residues 22 and 23" FT misc_feature join(77746..77814,77851..77919,77947..78006,78067..78135, FT 78163..78231,78277..78336) FT /note="6 probable transmembrane helices predicted for FT BB2358 by TMHMM2.0 at aa 4-26, 39-61, 71-90, 111-133, FT 143-165 and 181-200" FT misc_feature 77932..78243 FT /note="HMMPfam hit to PF01810, DE LysE type translocator, FT score 2.5e-07" FT CDS 78384..78854 FT /transl_table=11 FT /locus_tag="BB2359" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2596" FT /db_xref="InterPro:IPR014922" FT /db_xref="UniProtKB/TrEMBL:Q7WJY3" FT /protein_id="CAE32854.1" FT /translation="MADKRTEGSGKGGAKAAGKGGLGEVVLLSGGNPQIAKGYGDAPVQ FT AYIAAMPGWKRAVGERLDAIVERTVPGVYKAVKWNSPFYGFEGEGWFLSFHCMTKYIKV FT AFFRGASLQPLPPGASKQKDVRYLDIYEDAPFDEARFADWVAQASRLPGERM" FT CDS 79029..80285 FT /transl_table=11 FT /locus_tag="BB2360" FT /product="putative peptidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2595" FT /db_xref="GOA:Q7WJY2" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q7WJY2" FT /protein_id="CAE32855.1" FT /translation="MSKQAMLDAIEAEREVLIGFLQEFVRAASPNPPGDTRAAAAVIQG FT FLSARGVPNELLGPQESMPNVVSECEGGRAGPRLVYNGHMDVFPVGDGHGWTRDPWSGD FT IEEGRLHGRGTCDMKTGTAASVIAYAYLYARRAQLAGSVALTAVSDEETGGRWGTRWLL FT ENDTRWRGDCVLNGEPSSLDTIRFSEKGTLRLKFEVLAAGAHGAYVHRSESPTRIAAAL FT IGRLAEVEAIEPSLPAALKAHLQREDVRRALDVAMGEGAADVVTRTTLNVGVLNGGLKI FT NMIPDRCVFEVDIRLPVGTEPDVVLARLEGILAEFPQASMEVQQWHSTPPNVCAHDHPM FT VDFIADNAQAIVGRRPVAVPSIGSTDCRYWRRSGVPAYVYGPAPGRMAMSNESVDLDEF FT IAVAKVHAAAGWDYLNGAA" FT misc_feature 79089..80120 FT /note="HMMPfam hit to PF01546, DE Peptidase family FT M20/M25/M40, score 1.5e-60" FT CDS 80322..81836 FT /transl_table=11 FT /locus_tag="BB2361" FT /product="ABC transport protein, solute binding component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2594" FT /db_xref="GOA:Q7WJY1" FT /db_xref="HSSP:1B52" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q7WJY1" FT /protein_id="CAE32856.1" FT /translation="MMSKTGKMAAALAALCLSVGLAGAARAESTLQVALSTSLNSLDPN FT VTTLGEEYVFNGLVFGGLTRIDANSKVVPDLAVSWTPSADLREWTFKLRPGVKFHHGKP FT LTASDVVFSFQRIVDPATGSPGRTQLEVMKSVDAPDDATVHFTLTQPYADFPGLLTGRQ FT LRVVAQDRIDTIKTQPSGTGPFRFVRYTPGDQLELERNPDYYDKDRIKIDRVVMRVMPE FT AAARVAALRSGSIDMIWNLPLETIPDLKKDAAVVVDSVPSASWDGIVLNNSKPPFNDVR FT VRRAVFLALDKKELVNFALFGEGSPTHSPIAPTDPAFNKDIGFAPDLAQAKQLLAEAGY FT AKGFAVDIFVPAGRPSRERLGVAAQQLLRPLGIKLNVQRVPYNRYSAGVAGIAPMYVDG FT FFASPVIDAATSPWFYSTGSWNARMWHFSSKRVDQALDAARASTDRAEQIRHYQDFQRA FT LTEEVPGVIGYVTNVATAYRADIKNYHTNPFLWLDLYDVEKTGGAR" FT misc_feature 80322..80402 FT /note="Signal peptide predicted for BB2361 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.916 between residues 27 and 28" FT misc_feature 80343..81818 FT /note="HMMPfam hit to PF00496, DE Bacterial extracellular FT solute-binding proteins, family 5, score 4.7e-72" FT misc_feature 81750..81800 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT CDS 81840..82799 FT /transl_table=11 FT /locus_tag="BB2362" FT /product="ABC transport protein inner membrane component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2593" FT /db_xref="GOA:Q7WJY0" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7WJY0" FT /protein_id="CAE32857.1" FT /translation="MWAYLVRRLGHVVFVVAAMAVLIFLITQAMPGNVAYTIAGHFASP FT EQVAAIEARLGLNDPLWTQFWRWAGAALHGDMGQSLVMGRPVGPLISEALGRSALLAVA FT ALVLTAALGIFLGVVAAVRHGRWQDRLILAFSWLSISLPQFLIAIVLVLLVAGTLGWLP FT ATGYVELSAGFGAWLSHLVMPVCTLVLGLVAHVTSLQRSSMLETLSAPYVRAARAKGLR FT ERTVLYRHALRNALIPTVTVLALDFGILMGGIVVVETVFSYPGLGRLLIFAVEQKDLPV FT LQAGVLAVTVIYALANLAADIAYAILDPRIRYGNLDTH" FT misc_feature 81840..81926 FT /note="Signal peptide predicted for BB2362 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.903) with cleavage site FT probability 0.836 between residues 29 and 30" FT misc_feature join(81864..81932,82137..82205,82242..82310,82353..82421, FT 82542..82610,82692..82760) FT /note="6 probable transmembrane helices predicted for FT BB2362 by TMHMM2.0 at aa 9-31, 100-122, 135-157, 172-194, FT 235-257 and 285-307" FT misc_feature 82449..82682 FT /note="HMMPfam hit to PF00528, DE Binding-protein-dependent FT transport systems inner membrane component, score 2.9e-06" FT misc_feature 82452..82538 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 82828..83631 FT /transl_table=11 FT /locus_tag="BB2363" FT /product="ABC transport protein inner membrane component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2592" FT /db_xref="GOA:Q7WJX9" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7WJX9" FT /protein_id="CAE32858.1" FT /translation="MALVVGTLMLAAIVLVSLGAPWLAQYDFDAMDAAARMLPPSPQHW FT LGTDEFGRDVFSRVLYGGTTSILLGVSATALSFVVGVPLGLLAGYLRGWIDDAVMRTVD FT IVISVPPVMLGLLILASTEPSLWKAALAVGIIYTPIMIRLARGMTLSLANEEFITAARA FT RGEGLAWILLREILPNALPPLVVEASLRVSFAILLGAVFSFLGLGTQPPSSDWGLMVAE FT ARPYLERAPWVALSPGLAICLTVIAVNLMGEGLRKRLDARGEQRN" FT misc_feature 82828..82884 FT /note="Signal peptide predicted for BB2363 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.927) with cleavage site FT probability 0.886 between residues 19 and 20" FT misc_feature join(82831..82899,83032..83100,83119..83187,83215..83268, FT 83389..83457,83515..83583) FT /note="6 probable transmembrane helices predicted for FT BB2363 by TMHMM2.0 at aa 2-24, 69-91, 98-120, 130-147, FT 188-210 and 230-252" FT misc_feature 83272..83502 FT /note="HMMPfam hit to PF00528, DE Binding-protein-dependent FT transport systems inner membrane component, score 0.0062" FT CDS 83633..85267 FT /transl_table=11 FT /locus_tag="BB2364" FT /product="ABC transport protein, ATP-binding component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2591" FT /db_xref="GOA:Q7WJX8" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7WJX8" FT /protein_id="CAE32859.1" FT /translation="MHQDTILNIKGLEVRYGRNQVLHGVDLELPRGASLGIVGESGSGK FT STIAWTVLGLLPPGAAVTAGSVAFDGEDITGERAAGLRGDRIAMVFQDPFTALNPSLPV FT GRQITEALVERGRADARSARAEALRLMDEVRLPRASTLLDAYPHQLSGGMKQRIVIATA FT LACSPDLLLLDEPTTALDVTVEARILDLLDELRVQRGLSMVFISHNIGLVERMCSRVTV FT MHGGRVQEAGAAQQVLWHPAHAYTRKLLAALPLLEKRAPAVPAVGAPIARVRDVRLTFR FT PAHPLGGWARLLRLPRAEGVAALAGVSLELRPREVVGLVGESGSGKSTLGRCLVGLQAP FT DAGTVELSDHDVYRASPEVARRLRRQSQMVFQNPDSSLNPRQRVGEVLRRPLQLMGLDR FT RQQDRRMDELLDLVRLPAAYAERYPHQLSGGEKQRVGIARTLALEPSVLVCDEATSALD FT VSVQASILELLKDLRDRLGVAMLFISHDLAVVSQISDRVVVMRHGAIVEQGRTDQVLSA FT PAHEYTRLLLDSVPAFVARRAREAAVA" FT misc_feature 83726..84310 FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 1.9e-57" FT misc_feature 83747..83770 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 84080..84124 FT /note="PS00211 ABC transporters family signature." FT misc_feature 84572..85141 FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 3.2e-63" FT misc_feature 84593..84616 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 84911..84955 FT /note="PS00211 ABC transporters family signature." FT CDS 85351..86412 FT /transl_table=11 FT /locus_tag="BB2365" FT /product="putative LacI-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2590" FT /db_xref="GOA:Q7WJX7" FT /db_xref="HSSP:1CJG" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q7WJX7" FT /protein_id="CAE32860.1" FT /translation="MTTKATGNRKVVKIVDVAKAANVSPAVVSRILSNDSKLVVREETR FT ARVQQAIEALGYTPNLQARGLRLSRSNTLAMIVPELNSPVFPVIIQGAQRAAWERGYSL FT LVGGMGGEEEDPKVAGRLLRSNRIDGLLVTTGRHEAQMLQELATLNAPFVLVNRYLDDQ FT HPYVELDERGAAAAITRHFIELGHRRIAFLGGLQRRVGERRVAGYADALAEAGLPWVPQ FT LVVDAGYYKPGGEDGLRQLLALDEPPTAVVATNEIVAAGAMAAAHRQGVRIPRDLSIAS FT FSDGIVAELLSPALTAVRFPLERMGYLATAMLVDIVEGRGAPQAGLCLPHESVVVRDST FT ARPPGRKARAATR" FT misc_feature 85378..85461 FT /note="HMMPfam hit to PF00356, DE Bacterial regulatory FT proteins, lacI family, score 2.1e-05" FT misc_feature 85384..85449 FT /note="Predicted helix-turn-helix motif with score FT 1590.000, SD 4.60 at aa 12-33, sequence FT VKIVDVAKAANVSPAVVSRILS" FT misc_feature 85561..86361 FT /note="HMMPfam hit to PF00532, DE Periplasmic binding FT proteins and sugar binding domain of the LacI family, score FT 6.7e-23" FT CDS 86884..87408 FT /transl_table=11 FT /locus_tag="BB2366" FT /product="putative DNA-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2589" FT /db_xref="GOA:Q7WJX6" FT /db_xref="UniProtKB/TrEMBL:Q7WJX6" FT /protein_id="CAE32861.1" FT /translation="MEYLFTLKYQLADADSDLDALVERLGQAGCDDALVGMGLPGRLAL FT EFTREADSAEAAVRSALADVRRAMPTAALIEAAPDLVGLTDVAQIVGVSRQNMRKLMLA FT HPATFPAPIHEGSASLWHLADVLGWLQTRGGYPLAQATLDVARMALKVNVAKEARRLPR FT SAGAGLDALVG" FT misc_feature 87127..87192 FT /note="Predicted helix-turn-helix motif with score FT 1283.000, SD 3.56 at aa 82-103, sequence FT VGLTDVAQIVGVSRQNMRKLML" FT CDS complement(87417..87908) FT /transl_table=11 FT /locus_tag="BB2367" FT /product="putative regulatory protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2588" FT /db_xref="GOA:Q7WJX5" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:Q7WJX5" FT /protein_id="CAE32862.1" FT /translation="MKSTLSQWRSCMDIAEVARRTGVPASTLRYYDKVGLIASVSPPGA FT RRRYAPAVLEQLALVALGQAGGLSLDDIRAMLSPQGAPRVDRQVLLAKAEEIDATVKQL FT QAMSRGLRHAAACPAPSHAQCPTFKRLLKAAAAGALSRRRPASTGAAPRSPRKRAPARP FT " FT misc_feature complement(87762..87866) FT /note="HMMPfam hit to PF00376, DE Bacterial regulatory FT proteins, merR family, score 9.4e-07" FT misc_feature complement(87810..87875) FT /note="Predicted helix-turn-helix motif with score FT 1587.000, SD 4.59 at aa 12-33, sequence FT MDIAEVARRTGVPASTLRYYDK" FT CDS 87959..88453 FT /transl_table=11 FT /locus_tag="BB2368" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q7WJX4" FT /protein_id="CAE32863.1" FT /translation="MAPQEMLARVVLVGMGATAVMDVWTMALRRLGVPVLDYALAGRWA FT GHWRHGRFAHADIRQAPAVRGEAALGWGLHYATGVLFAGLLVGVAGQAWLRAPSPGPAL FT AVGVATVLLPWFVMQPALGAGFASSRTPTPLRNCLRSVLAHAVFGLGLYLAGLALAWIG FT R" FT misc_feature join(87977..88042,88163..88231,88268..88336,88379..88447) FT /note="4 probable transmembrane helices predicted for FT BB2368 by TMHMM2.0 at aa 7-28, 69-91, 104-126 and 141-163" FT CDS complement(88494..89648) FT /transl_table=11 FT /locus_tag="BB2369" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJX3" FT /db_xref="HSSP:1PQY" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7WJX3" FT /protein_id="CAE32864.1" FT /translation="MTGALQGLRVLDMGQWIAAPYCTAMLADFGAEVIKIEKPGGGDDQ FT RHSSPFVDGQSAFFNLFNRNKHSVTIDLSTPAGRAQCRDLIGSADVLVENYRPGVMARL FT GLDYATLHAEFPRLVYCSISGFGQSGPMRGEGGFDLVIQAMSGLAAQCGPTDGPAHRLP FT IPIVDVSTALFATIGVLTALAARQQTGTGQLVDVALLDSALAMAPLEVADYLATGHNPE FT RMGQASRNAAPYQIFRTQDGAIALGAASQGLWEKTCDLLDRPALKNDPRFADNTARLAH FT RAVLAELVEQALATQPSEHWLARLREAGIPAGPVLSYADILRHPQVAAREMVRRPETAG FT AATAATLASPIRLSDTPARFVSGAPALGAHNGLLASGTRTGPPA" FT misc_feature complement(88878..89444) FT /note="HMMPfam hit to PF02515, DE CAIB/BAIF family, score FT 1.5e-60" FT CDS complement(89645..90511) FT /transl_table=11 FT /locus_tag="BB2370" FT /product="putative (R)-specific enoyl-CoA hydratase" FT /db_xref="GOA:Q7WJX2" FT /db_xref="InterPro:IPR002539" FT /db_xref="UniProtKB/TrEMBL:Q7WJX2" FT /protein_id="CAE32865.1" FT /translation="MNVQALLAHEFPVETQSYGARDCSLYALSAGYGQDPMDERQLQYV FT YGDAPKTAGGMALVLANPGFWQRQPWTGIDWARCVLGEQRIATHRPLPAAGRIASQLRV FT TRITDKGRQFGAMLHAERTLHDADNGTHYATLSMVTICRGDGGFGGPPDDSTRLPAVPA FT RAPDIQTEQPTLPQQALLFDLHGIVNPVHSWPAAARQAGYPRPFLHGVCLMGLVQHAIA FT RELAAYDTDGIATLSARFRGVFYPGETLLLSLWRDGDQVRYEAHAKERSTLAVEGSARL FT QPAGAVQ" FT misc_feature complement(89678..90043) FT /note="HMMPfam hit to PF01575, DE MaoC like domain, score FT 1.5e-11" FT CDS complement(90525..91493) FT /transl_table=11 FT /locus_tag="BB2371" FT /product="putative exported protein" FT /db_xref="GOA:Q7WJX1" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJX1" FT /protein_id="CAE32866.1" FT /translation="MFCRKLALALGMAVSALSAGAAAAPYPAEPVRLVVPYAPGGTTDL FT LARLIASKLSAKYERQVVVENKTGAGGNIAAGFLARSRPDGYTLMMASIGQFAINPLIF FT SAPGYDAAKDFQPVIQVTRVPNVLVVNAASKLDSLQDLIKLAQAQPGVTYASSGNGSSN FT HLAGALLAHMANIDMLHIPYKGSAPGLQALYGGDVQVMFDNLSSALPHVQGGKLRALGV FT SSETRFSKLPDVPTIAESGLPGYEASAWFGLVAPAGTPAAIVEQLNRDVAAVLADNDVR FT SKLLEMGMTPQGGSVAQFQAVIDADIQKWKPIVQSLNLAVN" FT misc_feature complement(90537..91358) FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 2.1e-110" FT misc_feature complement(91425..91493) FT /note="Signal peptide predicted for BB2371 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.848 between residues 23 and 24" FT CDS complement(91519..92262) FT /transl_table=11 FT /locus_tag="BB2372" FT /product="probable GntR-family transcriptional regulator" FT /db_xref="GOA:Q7WJX0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJX0" FT /protein_id="CAE32867.1" FT /translation="MATVKDDLLASGSNKRYVNLAHLLRMRIRAGDYRPGDRLPAIDQL FT ARQFNTAVVTARQALALLERDGLVQRRQGVGTFVLDDAVAPVGLELPLDQDWSGIRALW FT GASQVRILAERDRVECPPDYAQHGQPADAYFYMRRVHEAQGIPYTVADIYIDREVYRKA FT PKRFRHEIALHVLPQLLPQRKLEAFEMIQVDAADVELAKWLDIAVGAPVVIMKRVVRDE FT SGRIIYAGTPVYRGDIVRLDRTFKL" FT misc_feature complement(92026..92205) FT /note="HMMPfam hit to PF00392, DE Bacterial regulatory FT proteins, gntR family, score 3.6e-19" FT CDS complement(92444..93433) FT /transl_table=11 FT /locus_tag="BB2373" FT /product="putative exported protein" FT /db_xref="GOA:Q7WJW9" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJW9" FT /protein_id="CAE32868.1" FT /translation="MQPRLTALHSALAALALCLPAGQAHAQADAAYPARPITLIVPFSA FT GGGSDVVARILATGLGSQLKQTVIVENRTGAAGNIGAEAVARARPDGYTLLFGSMGVMS FT VNSHLYRNMPLQPERDLAPVGRIYDTPHVIVVGQQSTLKSLPQLIEQAKARPDALTYAS FT AGNGTSTHLVGALFMHETGTRLMHVPYKGNAPALNDTMAGHVDMMFDQATNSTGQIQAA FT RLRALAATSHARIPDLPDVPTVAELGYPELEVTSWTVLAAPKATPAATMATLSAALKKT FT LAAPAIKEKIRQTGGVINYQDLPSTTEFVNRETARWGALIQSAGITAN" FT misc_feature complement(92456..93280) FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 9e-114" FT misc_feature complement(93356..93433) FT /note="Signal peptide predicted for BB2373 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.995 between residues 26 and 27" FT CDS complement(93469..94539) FT /transl_table=11 FT /locus_tag="BB2374" FT /product="putative malate/L-lactate dehydrogenase" FT /db_xref="GOA:Q7WJW8" FT /db_xref="InterPro:IPR003767" FT /db_xref="UniProtKB/TrEMBL:Q7WJW8" FT /protein_id="CAE32869.1" FT /translation="MTISPAASHDELAGHLARCADTGAPCRLSADQLAALLARLFERAG FT ASAATAAVLAQTCALAEQDEARSHGLHRVAGYVATLGTDWVDGHAEPAVIDASGATIIV FT DARNGFAQCALRAARPLIEERVRQHGLAMLLTRNSHHFGALWLDVEPYARQQWIALTAV FT NSISHMAPHGGTTPLYGTNPMAFACPRAGADPLVFDQASSVMAKGDVQLAAQHGHTLPP FT DAGVDRHGQPTRDPAAVLDGGALLPFGGHKGSAIAMMVEVLAAALTGGSFSWEVDRSAH FT PTAQTSRTGQFFLCIDPARSAGHGFAARIDQLAQALLRSGQQRLPGERRYAARRLAAQH FT GIAIDPAALLALLRLA" FT misc_feature complement(93475..94464) FT /note="HMMPfam hit to PF02615, DE Malate/L-lactate FT dehydrogenase, score 8.9e-51" FT CDS complement(94551..95741) FT /transl_table=11 FT /locus_tag="BB2375" FT /product="putative FAD dependent oxidoreductase" FT /db_xref="GOA:Q7WJW7" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q7WJW7" FT /protein_id="CAE32870.1" FT /translation="MQAMNQPQVQQYDIVIIGGGIIGSSVAYHVLARDPAARVCVVEPD FT PSYEFASALRSSGGCRVQFTCPENIAMSLYSLDVIKNFENTMAANGRPAPVDWVQGGYL FT FLVPPERVAMLERNVARQQAMGCQVDLLTPAELKARFPSIHVDDLGAGAHTPQDGWCDP FT NGLLWGFRRKAVELGAVYLKDRVVAADVTPARARRVTLESGAQLDAEAFVNAAGAWSGQ FT VAELFGMHLPVVPMRRFEHYFTCGNPIEPLPYVKDLSRLAFRSEGRGFSGGLVNGDENR FT GFNFDVDHDYFENVVWPAVAHRFPPLEAAKCHRTWSGLYEQNELDGNPVIGAWNARLKN FT LYTVAGFSGHGMMHAPAAGRGIAELLVHGAFQSLDLSKLGYERVQANQPYREEGIL" FT misc_feature complement(94629..95708) FT /note="HMMPfam hit to PF01266, DE FAD dependent FT oxidoreductase, score 0.0092" FT CDS 95853..96647 FT /transl_table=11 FT /gene="proC" FT /locus_tag="BB2376" FT /product="pyrroline-5-carboxylate reductase" FT /EC_number="1.5.1.2" FT /db_xref="GOA:Q7WJW6" FT /db_xref="InterPro:IPR000304" FT /db_xref="UniProtKB/TrEMBL:Q7WJW6" FT /protein_id="CAE32871.1" FT /translation="MRQALFLGYGRMGAALGEAWLRAGLLAGIDAVDPGRDGAGLRARL FT VRGADELPEQAYDLVVLAVKPAMAQQALRAVPPARLARACLVSIMAGVPAGALRQALQP FT PRPVARAMPNTPVMAGQGCTGLYGGDDVAPAQRAAIGRLFEAVGAAFWVDTEDQLHAVT FT ALSGSGPAYYHLFSEALAQAGEQLGLPAALARSLAARTALGAASLQCEEGADFAALRRE FT VTSPHGTTHAAIEVFEQAGALRTLVRDAVRQAQARSRELARP" FT misc_feature 95853..96587 FT /note="HMMPfam hit to PF01089, DE Delta FT 1-pyrroline-5-carboxylate reductase, score 8.6e-54" FT CDS complement(96663..97316) FT /transl_table=11 FT /locus_tag="BB2377" FT /product="probable GntR-family transcriptional regulator" FT /db_xref="GOA:Q7WJW5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJW5" FT /protein_id="CAE32872.1" FT /translation="MTDANAGPLTLTADGVTDELRALILDGSLGIGVQLKQEVLAKRFG FT VSRIPVREALKRLEAEGLVTHAPHQGSVVASRSVQELLETLDIRVGLESRALVLAIPHM FT TPAVFKEAETIIARYDASEFPREWSELNLEFHMCLYRPSGRPRLLKTIENLVRGIDIHL FT RAHQSYAVGRKSPQNEHRAILDACIAGKAKRARDLLEAHIEHTQDVLRKEHGLI" FT misc_feature complement(97095..97271) FT /note="HMMPfam hit to PF00392, DE Bacterial regulatory FT proteins, gntR family, score 2.7e-12" FT misc_feature complement(97149..97214) FT /note="Predicted helix-turn-helix motif with score FT 1446.000, SD 4.11 at aa 35-56, sequence FT LKQEVLAKRFGVSRIPVREALK" FT CDS 97536..98012 FT /transl_table=11 FT /locus_tag="BB2378" FT /product="putative phage-related protein" FT /db_xref="InterPro:IPR012596" FT /db_xref="UniProtKB/TrEMBL:Q7WJW4" FT /protein_id="CAE32873.1" FT /translation="MNSASRLNISSTSDDWRGLALSNFPLSPFVLDGELFASVEGFIQG FT IKFREDDPRRATAFLSSGWDAKHLGDTADRSGAYWGGARIRYGSAEHHQLIERAIRARI FT KQCEGLRRTLRATEGMTLVHDTGKPEAPHTSLPATVFCRILETLRREILARARP" FT CDS complement(98022..99509) FT /transl_table=11 FT /locus_tag="BB2379" FT /product="probable outer membrane efflux protein" FT /db_xref="GOA:Q7WJW3" FT /db_xref="InterPro:IPR010131" FT /db_xref="UniProtKB/TrEMBL:Q7WJW3" FT /protein_id="CAE32874.1" FT /translation="MHARLPLSALCIALACALAACAVGPDYQAPTPAAPADWTSWHGGP FT PELAGHAGAAGAPAAQWWRSFGDPALDRLQARALAASPDLQSAALRYAQARTQRRTVAA FT QRGPQVDAAAAVTRQRQSEDAAANRILDAIAPANRQAVTELLSDPYTLYQAGFDASWEL FT DLWGRVRRAVEAADADVAASAALYDAARLSLVSEVARNYFELRTAQHQARLLRQDIAAL FT QEQLSLIQARARGGLAADLDVARQRTQLAGLQAQLPRWLEQQAQAGNRLGLLLGARPGE FT LGDELAAPEGDGPARPLPDYALGLPSELARRRPDIRAAEARLHQATARIGLAQADLYPS FT IRLGARFGYESYESGKFGDWGSRTWSIGPSLDLPIFDSGRRRSVVTLRELQQQEAAVAY FT QQTVLRAWHEVDDALSGYRAEQLQYARLREKAESAAQARAWAQARYLGGLTDYLAVLDA FT QREDLQARRDLTASDGRLRTRLVVLYKALAGGAETQP" FT misc_feature complement(98028..98606) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02321, DE Outer membrane efflux FT protein, score 9e-33" FT misc_feature complement(98649..99299) FT /note="HMMPfam hit to PF02321, DE Outer membrane efflux FT protein, score 6.3e-22" FT misc_feature complement(99444..99509) FT /note="Signal peptide predicted for BB2379 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.629 between residues 22 and 23" FT misc_feature complement(99462..99494) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(99524..100645) FT /transl_table=11 FT /locus_tag="BB2380" FT /product="putative membrane protein" FT /db_xref="GOA:Q7WJW2" FT /db_xref="InterPro:IPR013526" FT /db_xref="UniProtKB/TrEMBL:Q7WJW2" FT /protein_id="CAE32875.1" FT /translation="MLARLSAMLRRIAFLCRKETLAIVKDPANRVILIAPVLLQSLLFG FT YGATYDLNHVPYALLDQSRGAGAVELAARIDGSGVFQRVATLRAPADIARVIDGGQALL FT VIHLAADFDRRLAAGQDAPMQVVLDGRNSTTAGMAAGHLATLVAGYNAALPGVGAPPVR FT VSTRAWFNPNLETRWNIMPGLIATLSMIQTLMLAALSVAREREQGTFDQLLVTPLNPLE FT ILVGKAVPAILIGLAQSTLILLVTRYWFAIPLAGSPATLYLGLLLFTTASVGIGLSISA FT LSANMQQAMVYTFVLMMPLILLSGLITPVGNMPEALQAATWANPLRFAVDLVRRVYLEG FT AGVRDVAIDFLPMLAVAAVTLPLAAWLFRNRLV" FT misc_feature complement(join(99542..99610,99713..99781,99800..99868, FT 99911..99979,100040..100108)) FT /note="5 probable transmembrane helices predicted for FT BB2380 by TMHMM2.0 at aa 180-202, 223-245, 260-282, 289-311 FT and 346-368" FT CDS complement(100652..101791) FT /transl_table=11 FT /locus_tag="BB2381" FT /product="putative membrane protein" FT /db_xref="GOA:Q7WJW1" FT /db_xref="InterPro:IPR013525" FT /db_xref="UniProtKB/TrEMBL:Q7WJW1" FT /protein_id="CAE32876.1" FT /translation="MSPRAGAGGFWPRLASLVRKEFRQLLRDRSNLAIGLVLPILLILI FT FGYGLSLDLRNAPIAVVLEDRSPQARDALAGLAGSDYLAPVWLADMHSAETLMRRHEVE FT GIVRVPADFARRLAAGDAQVQLLLHGADANSAAALARYVDGALGHAARLRADRAGHAAP FT PPGVTMVERLWFNAANTSTWYLVPGLIALIMTLVGAFLTALVVAREWERGTLEALFVTP FT VRPTEILLAKMIPYFVVGMLGLGLCLAAARLLFHVPLQGSLAVLLLSAMLYLVVALGIG FT LLISATTRNQFLASQVAVLSSFLPALMLSGFLFDLRNVPAAIRFVGSLLPATYFMELVK FT TAFLAGDNWPLIARNCAILAVYAVALLALARRLTRKSLD" FT misc_feature complement(join(100682..100741,100850..100918, FT 100937..101005,101042..101110,101171..101239, FT 101636..101704)) FT /note="6 probable transmembrane helices predicted for FT BB2381 by TMHMM2.0 at aa 30-52, 185-207, 228-250, 263-285, FT 292-314 and 351-370" FT CDS complement(101788..103548) FT /transl_table=11 FT /locus_tag="BB2382" FT /product="probable ABC transporter ATP-binding protein" FT /db_xref="GOA:Q7WJW0" FT /db_xref="HSSP:1F2T" FT /db_xref="InterPro:IPR003439" FT /db_xref="UniProtKB/TrEMBL:Q7WJW0" FT /protein_id="CAE32877.1" FT /translation="MNEAPVIEARDLAKRLGQTLALDALTLSVARGRLTALVGPDGAGK FT TTLLRLIAGLMRPDAGTLRVLGIDAVQSPQAVQDRISYMPQRFGLYEDLSVQENLDLYA FT DLHGVPARERRERYARLLAMTDLARFTERPAGKLSGGMKQKLGLACTLVRSPDLLLLDE FT PTVGVDPLSRRELWQIVQQLVEQTRLSVLVSTAYLDEAQHCAQVHVLYRGTLLAQGAPQ FT ALREPAQGLCFLAAPPAGVPARTLQARLLDDSAQIIDAVPEGGAVRYIQRPDADPARLR FT ALLGGAQAHATPARLEDGVQMLLRARLAADAPAATAAPRPVPPAPRASDAPDAAQPAIE FT VHDLVRKFGAFTAVASTSFSVRRGEIFGLLGPNGAGKTTTFRMLCGLLPASSGQLRVAG FT VNLRNAPARARRHIGYVSQKFALYGNLTVAENLAFFGGVYGLGGAALRRRIDAVLDEFG FT LRGHAQARSGELPGGYQQRLAMATGLLHEPEILFLDEPTSGIDPLARRAFWRRITALAL FT DGTTIIVTTHFMEEAEYCDRIAIQDAGRLLALGTPDAVRRQAGNAGDMNTAFIGIVEQA FT RARQGRETRP" FT misc_feature complement(101917..102459) FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 2.3e-54" FT misc_feature complement(102415..102438) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(102910..103455) FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 2.5e-57" FT misc_feature complement(103093..103137) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(103411..103434) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(103545..104558) FT /transl_table=11 FT /locus_tag="BB2383" FT /product="putative HlyD-family secretion protein" FT /db_xref="GOA:Q7WJV9" FT /db_xref="InterPro:IPR018254" FT /db_xref="UniProtKB/TrEMBL:Q7WJV9" FT /protein_id="CAE32878.1" FT /translation="MKKPLIAAAAAIALAIAGAAWWLTRAQPPDDILTLYGNVDIRQVA FT LAFDNSERIADMQVEEGDRVRAGQVLARQETRTLQLEAERAQARASAQEQALLRLRNGS FT RPQEIAQARARADAATADAALAQQDLQRLQGTARATDGRAVSRQDIDRAAARLRVARAQ FT AETQAKALQLALLGPRDEDIAEAAAQWQASLAELALLRHRLAQAELKAPTDAVVRARLL FT EPGDMASPQRPVYTLALTEPKWVRAYLSEPDLGRVRPGMRARVYTDSQPDRAIDGQVGY FT ISSVAEFTPKTVQTETLRTSLVYEIRIRVDDPQDRLRLGMPATVRLDLADAAEPGA" FT CDS 104677..105324 FT /transl_table=11 FT /locus_tag="BB2384" FT /product="putative TetR-family transcriptional regulator" FT /db_xref="GOA:Q7WJV8" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q7WJV8" FT /protein_id="CAE32879.1" FT /translation="MTRPRRSLRADGASTRARILEAAGQLFGQYGYAGVASKAICAAAG FT ADLAAINYHFGSRDGLYRAVLVEGHKHFINLDTLTALTQSDLSPREKLCAFIDGMVAGL FT WEQDWHTRVCAREVLAPSAHFAALIDEEVLPKFRLVAGILGDITGFAPGDPALARCAVS FT IVAPCMMLMVVDRNAPSPPQQVLAQPAADLAEHLKRFALAGLDAVSAAAPRR" FT misc_feature 104731..104871 FT /note="HMMPfam hit to PF00440, DE Bacterial regulatory FT proteins, tetR family, score 4.8e-11" FT CDS 105384..107144 FT /transl_table=11 FT /locus_tag="BB2385" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR000408" FT /db_xref="UniProtKB/TrEMBL:Q7WJV7" FT /protein_id="CAE32880.1" FT /translation="MAKEAYTVGPVLSFRGVGGARQWRVSALIGVPRTAKAPALRVEGR FT ACAAPVVLHQTARETFLRYDLSCDMQARERKVEFGPRGGPAWHFTVPAKGAAPRLAYVS FT CNGFSDPSGMRKLVRPENAVWADLLCNHDRDLRPADYLLDKEQLWHETRTHDEGLQRFH FT LLLMGGDQIYFDSIWEDIAALKQWVGLARAQQLEFKVSQALEDEIEAYYFGLYSRRWLP FT PSRAPWAGAQPSLDAADAMARVPTIMMWDDHDIFDGWGSYSPAMQRCELFQTLFRHARR FT AFWVFQMQHALADLPPLQAIARANVLPQDPQYEGIAWSRQLKRDRLALPLLDGQPGFTS FT AYRLGPLALVAADLRTERSRTQILGTQAWTALQGWLHGLKGNRPASATGGCRHLIFMSS FT VPVAHPKLSLAEGLLDTFGQDHVLDSNADDLKDHWSHDDHEGERKRLLETLMQVANEKL FT LRVSIASGDVHVAAWGNAYRRDIPPTSNWAQIQQFTSSAVVHPSLLGVAERLFLFMLNG FT TAAQAQPIDVNLSVEMMLFPGHNRYVMPARNWLAFELDAGKAGKLWASWRCETETGFSN FT HLQAVQPAQG" FT misc_feature 106542..106574 FT /note="PS00626 Regulator of chromosome condensation (RCC1) FT signature 2." FT CDS complement(107145..107990) FT /transl_table=11 FT /locus_tag="BB2386" FT /product="putative aldo/keto reductase-family protein" FT /db_xref="GOA:Q7WJV6" FT /db_xref="HSSP:1HW6" FT /db_xref="InterPro:IPR020471" FT /db_xref="UniProtKB/TrEMBL:Q7WJV6" FT /protein_id="CAE32881.1" FT /translation="MKQHRFGATDRMVAAIGQGTWNLDNSARASAVDALRNGLDLGMAH FT IDTAEMYGAGAAERLVGEAIAGRRDQVFLVSKVLPENASRAGTRAACERSLRRLGTDHL FT DCYLLHWRGAHPLEETFAAFDALQREGKIRSYGVSNFDVDDLQETLDIVGPGKLACNQV FT LYHLRERAIEHAVMPWCAAHGVAVVAYSPFGHDDFPAPASAGGRVLARIAQAHGATPRQ FT IALAFLTRQPGVFAIPKAADPAHVAANAAAGRLALSEQDCADLDAAFERGPRPASLPMI FT " FT misc_feature complement(107175..107975) FT /note="HMMPfam hit to PF00248, DE Aldo/keto reductase FT family, score 6e-64" FT CDS complement(108033..109901) FT /transl_table=11 FT /locus_tag="BB2387" FT /product="putative sigma-54-dependent transcriptional FT regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2158" FT /db_xref="GOA:Q7WJV5" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7WJV5" FT /protein_id="CAE32882.1" FT /translation="MPGYQLSASGQHLPSTQAAAPIVRSWERCASATADLHDDPVALRH FT GDLQERLEQHACVLRAAQPEIETLAGMVASASSLVLLADASGVILQASGNTGFLQRADH FT VALRPGVSWAENHRGTNAIGTALIEAAALRVHGAEHFLRRNQILSCHAAPIRSPRGDIL FT GVLDISGDAGRMHAYALSLASMCARQVANRVIEQAGERCLYLVFHKQASLLDSVERGLL FT LIEDERIVGANDAAVALLGATWPALLDQPLDGWLVDWRAVARTPGRVHTPQGAPFHAVL FT RQGGHARSLPAPPRPPRAVPAQAPEETLPALAPALQAGFERARRALDGGLSVLLQGETG FT AGKEVYAQHLYRRSIWRDGPFVAVNCGALPESLIEAELFGYEPGAYTGARRLGARGRLR FT EADGGVLFLDEIGDMPLALQTRLLRALQERMVQPLGADKAVPVNFGLVSATHRDLDAMI FT AAGEFRADLYYRLHDYAVPLPRLRERDDLRPFICAALRALDDTPAGLTLADDALDALAA FT YAWPGNYRQLRSVLRTLALFHPPGSLIHRHHLPAAIAAPAVHAADGAAPRPGVAAPPAA FT PATLRDASLHRIDQALARHGGNIAGAAHELGIHRSTLYRHLARQRG" FT misc_feature complement(108042..108164) FT /note="HMMPfam hit to PF02954, DE Bacterial regulatory FT protein, Fis family, score 3.5e-10" FT misc_feature complement(108048..108113) FT /note="Predicted helix-turn-helix motif with score FT 1941.000, SD 5.80 at aa 597-618, sequence FT GNIAGAAHELGIHRSTLYRHLA" FT misc_feature complement(108318..108977) FT /note="HMMPfam hit to PF00158, DE Sigma-54 interaction FT domain, score 5.1e-86" FT misc_feature complement(108864..108905) FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT CDS 110159..111688 FT /transl_table=11 FT /gene="acoD" FT /locus_tag="BB2388" FT /product="aldehyde dehydrogenase" FT /EC_number="1.2.1.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP2157" FT /db_xref="GOA:Q7WJV4" FT /db_xref="HSSP:1CW3" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q7WJV4" FT /protein_id="CAE32883.1" FT /translation="MDLSDLKKLGLDVAYPFKEQYENYIGGQWVPPVGAEYFDNLSPIT FT GQPFCRVPRSGAADIELALDAAHRARAAWARTSPAERANILLRIADRIEGQLPMLAVAE FT SIDNGKPLRETTAADLPLAIDHFRYFAGCIRAQEGAISEIDANTVAYHFHEPIGVVGQI FT IPWNFPLLMAAWKLAPALAAGCVVVLKPAEQTPASILVLAELIGDLLPPGVLNVVNGYG FT KEAGQALATSKRIAKIAFTGSTPVGKHILHAAADNLIPATVELGGKSPNIFFDDVMDHD FT DEFLDKALEGLAMFALNQGEVCTCPSRILIQESIYERFIEKAIARVQSIKTGHPLDAGT FT MVGAQVSQVQMDKILSYIDIGRQEGAQCLTGGARNDMLPGGLDQGFYVQPTMLLGKNSM FT RIFQEEIFGPVAAVATFKDEEEAIAMANDTFYGLGAGVWSRDGARAYRVGRGIEAGRVW FT TNCYHLYPAHAAFGGYKQSGIGRETHKAALSNYQQTKCLLVSYSAKALGFF" FT misc_feature 110240..111661 FT /note="HMMPfam hit to PF00171, DE Aldehyde dehydrogenase FT family, score 1.9e-227" FT misc_feature 110945..110968 FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT misc_feature 111044..111079 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT CDS complement(111825..112475) FT /transl_table=11 FT /locus_tag="BB2389" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2156" FT /db_xref="GOA:Q7WJV3" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/TrEMBL:Q7WJV3" FT /protein_id="CAE32884.1" FT /translation="MDSSQVPNPVLVLVGSPRRDGNSALLAQAVAEGARQSGAAATLLF FT LDDYIAGFLTDEKEADARRPDDRYGELFFDHFLPARAVVLCTPVYWYGMSAQAKAFFDR FT SFTYYSASHPRHAEVLRRMTGKRLALAVSSEETYPGAALGIVHQLQEFTRYTHSQFVGM FT VHGAGNRRGEVAHDPRRPLQAAHRLGHGLLSLPYSDYRIDSPRDHQVWPGAPA" FT misc_feature complement(111894..112454) FT /note="HMMPfam hit to PF02525, DE Flavodoxin-like fold, FT score 2.6e-06" FT CDS 112607..113533 FT /transl_table=11 FT /locus_tag="BB2390" FT /product="putative LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2154" FT /db_xref="GOA:Q7WJV2" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJV2" FT /protein_id="CAE32885.1" FT /translation="MFHDLPLGALRAFEAAARLLSFKGAAAELHVTPTAVSHQIRALEQ FT RLGFALFERLPRGVLLTPKGGRLFQRVHGMLLDLAQTLDALRPRPSTGGLTVSTTHSFA FT ALWLVPRLGRFYQAHPGYEVRLDATSRLVDLLQDASVDVAIRYGGGDRSGRHRGLQAAA FT VLPERFAVYGAPAAVASAARRRPALISVQWRDSTVYETGWRQWCEAAGVSWLARAAPRS FT YEEENYALQAAIAGQGLVLASSAMVSDSEARGLLACFRPDISVPGLRYTALSAPGRQRH FT PPVRAFLDWLAGEFETAAARGRPGLAP" FT misc_feature 112625..112804 FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1e-21" FT misc_feature 112664..112729 FT /note="Predicted helix-turn-helix motif with score FT 1608.000, SD 4.66 at aa 20-41, sequence FT LSFKGAAAELHVTPTAVSHQIR" FT misc_feature 112667..112759 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 112868..113494 FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 4.1e-25" FT CDS 113530..114825 FT /transl_table=11 FT /locus_tag="BB2391" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2153" FT /db_xref="InterPro:IPR007383" FT /db_xref="UniProtKB/TrEMBL:Q7WJV1" FT /protein_id="CAE32886.1" FT /translation="MSAPADPRLAQLRRMQRWALALLAAMIAGFVASHLMGGQGAWAWV FT RAFCEAATVGALADWFAVVALFRRPLGLPIPHTAIIPANKARIGDNLAVFVRDHFLDPA FT TLLEKLRVFDPAARLGHWLADPRQTRSLGQGARQVALQALDLLDEQAVSRAIQGFAVAQ FT LRRWDAARTAGEVLALLTRDGRHQELLDAALRRLGDYLGEEDIRQRACALLVKFARKEW FT PRIIAAVDVIGSVEGIADNLADRMARALVDELRDVLSRPDHPVRRNYEAWVADYIARLR FT DDPELAGQVEALKQRLIDDPRVQEYALGLWRDIHAVLRRDLQAEDSALARHLEDALQAL FT GQRLSRDPELRRAVNEHVLDSARKLTDSLRSGVTEHISRTVKNWDERHLVRELELSVGR FT DLQYIRFNGTLVGGLIGLALHAGVLLVQRAGG" FT misc_feature 113530..113658 FT /note="Signal peptide predicted for BB2391 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.964) with cleavage site FT probability 0.379 between residues 43 and 44" FT CDS complement(114847..115731) FT /transl_table=11 FT /locus_tag="BB2392" FT /product="putative lysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2152" FT /db_xref="GOA:Q7WJV0" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJV0" FT /protein_id="CAE32887.1" FT /translation="MSRNIDTALLRAFLAVHDTGSLTAAAALLHLTQGAVSQQLQRLEA FT LFGRTLLERRRSGAALTGDGARLLGRAREMVRINDELMQHMTGAGCVGAVRLGVPHDLI FT GTHLPGLLRAYSLRYPDVDISLISATSPELLEQVRRRKLDLTLAEEPIGAAAGGERLAV FT DRVVWLAAPGGQAWRKNPLPVSLVSDACAFRPVLADALDGGRIPWRSVFENGNADATLT FT TVRLDLAVTASLLSVAPADLQVLDAASGLPALPDYAINLYIAPGERSQAVEEMARHIRQ FT AYQERRPAYAAAA" FT misc_feature complement(114880..115470) FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 1.2e-20" FT misc_feature complement(115534..115713) FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2.2e-16" FT misc_feature complement(115579..115671) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature complement(115609..115674) FT /note="Predicted helix-turn-helix motif with score FT 1825.000, SD 5.40 at aa 20-41, sequence FT GSLTAAAALLHLTQGAVSQQLQ" FT misc_feature complement(115654..115731) FT /note="Signal peptide predicted for BB2392 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.880) with cleavage site FT probability 0.495 between residues 26 and 27" FT CDS 115830..116705 FT /transl_table=11 FT /locus_tag="BB2393" FT /product="putative oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2151" FT /db_xref="GOA:Q7WJU9" FT /db_xref="InterPro:IPR003719" FT /db_xref="UniProtKB/TrEMBL:Q7WJU9" FT /protein_id="CAE32888.1" FT /translation="MQTTTSLIASVRRIAAFSDGARGGNPAGVHVAEVLPDAMTMQQMA FT AEIGYSETVFAAPAYGGWRVRYFAPEAEVPFCGHATIALGAVLAEQEGDGVFALTTNHA FT NITVEGRRQGGLYSAALQSPRTRSAPLEAAVRDEALALFGYTPADLDSRLPPAYAEAGA FT AHLILPLNSRERLAAMRYDLAAGRAFMKRTGVVTIAWVHAESATLLHARNAFAAGGVYE FT DPATGAAAAALAGHLRDSGWLRAGAIEILQGFDMGVPARLRAEYGPEPGSSVRVAGTAR FT ALARQPALID" FT misc_feature 115851..116696 FT /note="HMMPfam hit to PF02567, DE Phenazine FT biosynthesis-like protein, score 2.7e-41" FT CDS complement(116695..117051) FT /transl_table=11 FT /locus_tag="BB2394" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2150" FT /db_xref="InterPro:IPR009874" FT /db_xref="UniProtKB/TrEMBL:Q7WJU8" FT /protein_id="CAE32889.1" FT /translation="MDQYVDGFLLSVPNDKLDTYRQMATKAGAIWKEHGALAYCECTGD FT DLDIEGMVSFKTSAAAREGETVVFAWIVYPNRAERDRINAAVMADPRLKEQCVEGVFDF FT KRMAYGGFKTLVNL" FT CDS 117125..118156 FT /transl_table=11 FT /locus_tag="BB2395" FT /product="putative AraC-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2149" FT /db_xref="GOA:Q7WJU7" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:Q7WJU7" FT /protein_id="CAE32890.1" FT /translation="MPTGDCDIVAGGSRQAGRSMLGAMKRLALLVPERANIASLENARQ FT GFLAANGFLRERGCAPRFDVRLVAATPQVRLDHGRITVQADTVLEAVGEVDLCVVPPIQ FT GDPQPALQENGALIDWLAGYYKNGGEVASLCVGAALLAAGGVLDGQRAVVHWAAQSDFG FT RLFPAVRWVSDRVVLEANGIYTSGGAFSAAHLVLHLVDKYTDRETAIWCAKLFQLDWSR FT QSQLPFVVFVGQKTHGDGVVRQVQEHIEANYTERLTVEQLAQRVALGRRTLERRFRHAT FT GNSIVEYVQRIRIEAAKKQLESSRKSVAEVMYEVGYNDTKAFRDIFNKYCGMSPLMYKE FT RYL" FT misc_feature 117197..117736 FT /note="HMMPfam hit to PF01965, DE DJ-1/PfpI family, score FT 0.012" FT misc_feature 117857..117994 FT /note="HMMPfam hit to PF00165, DE Bacterial regulatory FT helix-turn-helix proteins, araC family, score 3.1e-05" FT misc_feature 117893..117958 FT /note="Predicted helix-turn-helix motif with score FT 1340.000, SD 3.75 at aa 257-278, sequence FT LTVEQLAQRVALGRRTLERRFR" FT misc_feature 118013..118144 FT /note="HMMPfam hit to PF00165, DE Bacterial regulatory FT helix-turn-helix proteins, araC family, score 0.00026" FT CDS complement(118329..118508) FT /transl_table=11 FT /locus_tag="BB2396" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2148" FT /db_xref="UniProtKB/TrEMBL:Q7WJU6" FT /protein_id="CAE32891.1" FT /translation="MPAKSKAQQMAAGAALAAKRGESRVSDLKGASRDMYDSMSERELE FT HMAGTARKGKPYHK" FT CDS 118606..119130 FT /transl_table=11 FT /locus_tag="BB2398" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2147" FT /db_xref="InterPro:IPR005180" FT /db_xref="UniProtKB/TrEMBL:Q7WJU5" FT /protein_id="CAE32892.1" FT /translation="MQCPAFPGRFLRSSRMQISRHFPRLVRRAALALCLAGAAQVHAQE FT AAVQRKSDYPFAATVARLQDALRAKGMTIFAVIDHQAAAKQAGLDMPPTQVVVYGNPKA FT GTPLMLAAPDFALELPLKVLVRETASGEVLVVYHPAGTREGMLGLPAGMAQQLAGAERI FT VDAAVRRAPAD" FT misc_feature 118606..118734 FT /note="Signal peptide predicted for BB2398 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 1.000 between residues 43 and 44" FT misc_feature 118744..119109 FT /note="HMMPfam hit to PF03625, DE Domain of unknown FT function DUF302, score 7.1e-26" FT CDS complement(119141..119977) FT /transl_table=11 FT /locus_tag="BB2399" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2146" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7WJU4" FT /protein_id="CAE32893.1" FT /translation="MTPPARSSAAVPAQYADVHYADRPMRIEYALLAPERRDAPLLVFL FT HEGLGSLAMWRDWPRRVCDAAGCRGLVYSRYGYGRSTVRPLDESRPIDYLHQQAAQALP FT ALFAALGIDARRDKPVLFGHSDGASIALLYAALCPDAVAGIAVAAPHIYVEDITVANIA FT VALRAYRETTLRDRLARYHDDVDSTFASWTDTWLDPAFRQWNIEAYLPAITCPVLAMQG FT VDDEYGTLEQIRGIRRLAPQTRLLEIQDCGHSPHKDQPELVTRALAGFVGALPRPA" FT misc_feature complement(119165..119776) FT /note="HMMPfam hit to PF00561, DE alpha/beta hydrolase FT fold, score 2.9e-10" FT CDS 120090..120461 FT /transl_table=11 FT /locus_tag="BB2400" FT /product="putative ArsR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2145" FT /db_xref="GOA:Q7WJU3" FT /db_xref="InterPro:IPR001845" FT /db_xref="UniProtKB/TrEMBL:Q7WJU3" FT /protein_id="CAE32894.1" FT /translation="MVEYQAPALDRVFHALSDPTRRAMLRRLADGEHNIRALAAPFAMS FT FTAASKHLKVLESAGLVSRRVQGRSHLCRIDAAPLAAIDEWLKFYERFWHTRLDMLETL FT LRADAASSVPSHPDQDPTP" FT misc_feature 120126..120359 FT /note="HMMPfam hit to PF01022, DE Bacterial regulatory FT protein, arsR family, score 2.1e-13" FT misc_feature 120186..120251 FT /note="Predicted helix-turn-helix motif with score FT 1024.000, SD 2.67 at aa 33-54, sequence FT HNIRALAAPFAMSFTAASKHLK" FT CDS 120458..121009 FT /transl_table=11 FT /locus_tag="BB2401" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2144" FT /db_xref="GOA:Q7WJU2" FT /db_xref="InterPro:IPR013538" FT /db_xref="UniProtKB/TrEMBL:Q7WJU2" FT /protein_id="CAE32895.1" FT /translation="MTSPSSASPDGHGARLDAQSIRFERLLPGPIERVWAWLADADKRA FT RWLAGGELPRQPGQTFELHFNHAALTAETAPARYAQYDRPIVARHTLLRCEPPRVLALT FT WGGGAGEAPSEVLFELSEAGEQVRLVLTHTRLADRAAMLDVAGGWHAHLAVLAGKLAGQ FT APPPFWTTLAQAEQDYEQRL" FT CDS complement(121025..122716) FT /transl_table=11 FT /locus_tag="BB2402" FT /product="putative sulfate transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP2143" FT /db_xref="GOA:Q7WJU1" FT /db_xref="InterPro:IPR011547" FT /db_xref="UniProtKB/TrEMBL:Q7WJU1" FT /protein_id="CAE32896.1" FT /translation="MPHSVACLDLRVIALLEAKRAGLLRRAHWLPNIVSGLIVGVVALP FT LAMAFAIASGAKPEQGLYTAIVAGLLVSLCGGSRVQIAGPTGAFIVILAGITAQHGVAG FT LQLATLMAGCILLALGAARLGAIIKYIPAPVIVGFTAGIGVIIWVGQWKDFFGLPSPAG FT THFHEKLWQLVHSLPQLHLATTALAALSLALLLANNRLPYLRRVPGPLVALVVATTLQA FT VLGLDGVATIGSAFGGIPQGLPSWQWPEITVSRVIELIGPAFAIAMLGAIESLLSAVVA FT DGMAGTRHDSNQELVGQGLANIVAPLFGGFAATGAIARTATNIRNGGTSPLAGVVHCIT FT LLLMVLLLAPLAENVPLAALAAILFVVAWNMSDAPHFVRMIKRAPRADVAILLVTFVLT FT VFADLVVAVNIGVVIAILHFLRRMASSVQVQAQSPAELGDELGHRGYGPLPDDVLVYAV FT EGPLFFGAAENFERALAATHTDPRTLIIRLRWVPFIDITGLQALEEVITDLQRRGVRVI FT LSGANPRVKAKLHRAGLVGLAGADNVFDRFEDAVLSCRAPAAPATA" FT misc_feature complement(121067..121399) FT /note="HMMPfam hit to PF01740, DE STAS domain, score FT 2.2e-20" FT misc_feature complement(121448..122362) FT /note="HMMPfam hit to PF00916, DE Sulfate transporter FT family, score 1.4e-89" FT misc_feature complement(join(121478..121546,121583..121651, FT 121661..121729,121763..121831,121874..121942, FT 122126..122179,122270..122338,122357..122425, FT 122468..122536,122555..122623)) FT /note="10 probable transmembrane helices predicted for FT BB2402 by TMHMM2.0 at aa 32-54, 61-83, 98-120, 127-149, FT 180-197, 259-281, 296-318, 330-352, 356-378 and 391-413" FT CDS complement(122765..123445) FT /transl_table=11 FT /locus_tag="BB2403" FT /product="putative gntR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2142" FT /db_xref="GOA:Q7WJU0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJU0" FT /protein_id="CAE32897.1" FT /translation="MRSSTDLSAEGISQAIATAIVSHRLPPGTRLREEALASVYKVSRT FT KIRAALLMLSKDKLIQIVPDKGAFVSKPDAHEAREVYAVRRILEAALAREFVACAAPQD FT YERLEQHLHQEREAIHEGDVQRRNQLLAGFHLQLAEIVGNSVLTAMLHELLARTAVITV FT MYQSAHDASCSSQEHYAFLAAAREGDAERACALMDEHLLHLQTALDFDGAPAPNRDLVA FT ALLS" FT misc_feature complement(123236..123412) FT /note="HMMPfam hit to PF00392, DE Bacterial regulatory FT proteins, gntR family, score 4.7e-08" FT CDS complement(123694..124152) FT /transl_table=11 FT /locus_tag="BB2404" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2141" FT /db_xref="UniProtKB/TrEMBL:Q7WJT9" FT /protein_id="CAE32898.1" FT /translation="MHTRARHATSPLPAMPTSLPARAYALPLILPLLLAACSDAVQTQY FT RDLDEARAAGAIQRGWLPAWLPARTGAIAEAHDLDTNRRAARFVLPDGARIEPPGCAPA FT SGRLPPPALALPGWPASLHQEGAAGRYRLYRCADGYAAFDASHGYLWN" FT misc_feature complement(124042..124074) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(124084..124152) FT /note="Signal peptide predicted for BB2404 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.976) with cleavage site FT probability 0.707 between residues 23 and 24" FT CDS 124322..125251 FT /transl_table=11 FT /locus_tag="BB2405" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2140" FT /db_xref="GOA:Q7WJT8" FT /db_xref="InterPro:IPR003689" FT /db_xref="UniProtKB/TrEMBL:Q7WJT8" FT /protein_id="CAE32899.1" FT /translation="MNQPSSLAADLRGAWHAQAQSHPLITLGLAASAAGVVLLLVAGIV FT NALTGENRVHVGYAVLGGAAGFAATALGALMALGLRAISARTQDAMLGFAAGMMLAASA FT FSLILPGLDAAGTIVGPGPAAAAVVALGLGLGVLLMLGLDYFTPHEHERTGHQGPEAAR FT VNRVWLFVLTIILHNLPEGMAIGVSFATGDLRIGLPLTSAIAIQDVPEGLAVALALRAV FT GLPIGRAVLVAVASGLMEPLGALVGVGISSGFALAYPISMGLAAGAMIFVVSHEVIPET FT HRNGHETTATVGLMAGFALMMFLDTALG" FT misc_feature join(124382..124450,124493..124561,124595..124663, FT 124691..124759,124820..124888,124997..125065, FT 125084..125143,125186..125245) FT /note="8 probable transmembrane helices predicted for FT BB2405 by TMHMM2.0 at aa 21-43, 58-80, 92-114, 124-146, FT 167-189, 226-248, 255-274 and 289-308" FT misc_feature 124805..125236 FT /note="HMMPfam hit to PF02535, DE ZIP Zinc transporter, FT score 2e-29" FT CDS complement(125264..125911) FT /transl_table=11 FT /locus_tag="BB2406" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2139" FT /db_xref="UniProtKB/TrEMBL:Q7WJT7" FT /protein_id="CAE32900.1" FT /translation="MPFLRAPLRAHRAVREQDMKSRRLQLAGVALMMAAACGQAVAGGG FT HHGHHGYYGGYGHSHGSSSDGWWIAGALALVAAGTYLAVSSQPSYAPAAQYSAGGITYT FT TPGGYAASPYDSTVYDPPSYDPPTAYEDAGYAPAGHGQPAYDDGTVAGYPVAPQGAGIA FT RTATRQPAGEAACRREAMNQSGYDPATPSAWTTGVSVDSYQRALSACLAGRG" FT misc_feature complement(join(125657..125716,125774..125842)) FT /note="2 probable transmembrane helices predicted for FT BB2406 by TMHMM2.0 at aa 24-46 and 66-85" FT misc_feature complement(125786..125911) FT /note="Signal peptide predicted for BB2406 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.992) with cleavage site FT probability 0.979 between residues 42 and 43" FT misc_feature complement(125801..125833) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(125985..127802) FT /transl_table=11 FT /locus_tag="BB2407" FT /product="putative ABC-transporter membrane-spanning FT ATP-binding component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2138" FT /db_xref="GOA:Q7WJT6" FT /db_xref="HSSP:1MV5" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7WJT6" FT /protein_id="CAE32901.1" FT /translation="MRMLWTYLRPHGGLALLALLLAAASQVLALIDPIIFGRIIDEYAI FT GRAGKTGDQLLAGVLGLLALALAVAILSRLAKALQEYVTRLVVQKLGTQIFNDGLRQVM FT RLRFQEFEELRSGETLSLLQKVRSDSERFINAFINTAFAAGVGVAFLCWYSVTRHWLLV FT PVFFVGVLLLGGLTGLLSRQIRSQQRSIMRETNRNSGFITESLRNIELIKSLGLTYPEI FT RRLQAQTQQIFALEMQKVKRIRLLSFLQGMILSVLKLSVLFALLWLILRDVLSTGELIA FT MQFISVAIFAPLQELGNLILAYREADASLNHYAALMARPVERNPESAQDSGPIQRVRFG FT EVRFRHQGATENALDGVSFEARLGDTVAFVGPSGSGKSTLVKLLVGLYAPDHGEVYYND FT VSTRDLRFNPTRRQIGFVTQETHLFSGTLRENMQLVKPDVTDEEIVAAMRQASCANVLA FT RSPAGLDTTIGEGGVKLSGGERQRLSIARALVRQPRLLIFDEATSALDSLTEEQITQTI FT RDVSRRAGQITILIAHRLSTIMHADTIFVLEKGRVVEQGSHAELLAGKGLYYAMWRQQI FT GERPAVRAPEPQSEPDTAGGGPEAGVSLL" FT misc_feature complement(126153..126713) FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 2.9e-54" FT misc_feature complement(126336..126380) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(126669..126692) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(join(126900..126968,126996..127064, FT 127257..127325,127338..127406,127575..127643, FT 127701..127769)) FT /note="6 probable transmembrane helices predicted for FT BB2407 by TMHMM2.0 at aa 12-34, 54-76, 133-155, 160-182, FT 247-269 and 279-301" FT misc_feature complement(126924..127760) FT /note="HMMPfam hit to PF00664, DE ABC transporter FT transmembrane region, score 9.7e-11" FT misc_feature complement(127650..127673) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(127716..127802) FT /note="Signal peptide predicted for BB2407 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.989 between residues 29 and 30" FT CDS complement(127886..128437) FT /transl_table=11 FT /locus_tag="BB2408" FT /product="putative acetyltransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2136" FT /db_xref="GOA:Q7WJT5" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q7WJT5" FT /protein_id="CAE32902.1" FT /translation="MPSAPATPSVAVRRAQAPDAALLPAIERSAGQRFLDAPGLAWIAA FT DEVMSEQDHRAWIAAGTSWVAECPGAGLAGFLVAERTADALHVWELAVRREMQGRGIGG FT RLVRAAIDAAAAAGLPAITLTTFRDLPWNQPFYARLGFATLQADGLNVRLQAILAREAS FT LGLPAARRCAMRREIAAARR" FT misc_feature complement(128009..128245) FT /note="HMMPfam hit to PF00583, DE Acetyltransferase (GNAT) FT family, score 3.4e-13" FT CDS 128492..128686 FT /transl_table=11 FT /locus_tag="BB2409" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q7WJT4" FT /protein_id="CAE32903.1" FT /translation="MRLLLAIFLPFTVFFTIGRPIAGIICLLLQITLIGWIPAALWAVY FT ALSQFHTDRKIRDAVGGRG" FT misc_feature 128552..128620 FT /note="1 probable transmembrane helix predicted for BB2409 FT by TMHMM2.0 at aa 21-43" FT CDS complement(128705..129052) FT /transl_table=11 FT /locus_tag="BB2410" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2134" FT /db_xref="GOA:Q7WJT3" FT /db_xref="InterPro:IPR006913" FT /db_xref="UniProtKB/TrEMBL:Q7WJT3" FT /protein_id="CAE32904.1" FT /translation="MHYHGSCHCGTIRFDVEGELTGAMSCNCSICRRKGALLWFVPRDH FT LRLATPDEQIATYTFNRHLIKHRFCPTCGIHTHGEGVDQQGRAMAAINIRCLDDVDLDA FT VAVHQYDGRAA" FT CDS complement(129081..130520) FT /transl_table=11 FT /locus_tag="BB2411" FT /product="putative transmembrane efflux protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2133" FT /db_xref="GOA:Q7WJT2" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7WJT2" FT /protein_id="CAE32905.1" FT /translation="MPHTLDERKRWLALMVLCLGVLMIVLDTTIVNVALPSIKADLGFT FT EASLVWVVNAYMLTFGGFLLLGGRLGDLLGQRRMFLAGLTLFTLASLACGMAQGQAMLV FT AARAVQGLGGAVVSAVALSLIMTLFTEPAERARAMGVYGFVCAGGGSIGVLLGGLLTSS FT LSWHWIFLVNLPIGALVYALCLPLLPASQGPTGHPRLDLAGAAAITASLMLAVYAVVNG FT NEAGWTSPQSLGLLALAVALLALFLRIEARVPAPLMPLSLFALRNVATANIVGVLWAAA FT MFAWFFISALYMQLVLGYTAMQVGLGFLPANIIMAAFSLGLSARLVMRFGIRAPLVCGL FT LVAALGLALFARAPVAGSFAVDVLPGMLLLGLGAGIAFNPVLLAAMSDVDPSEAGLASG FT VVNTSFMMGGALGLAVLASLAAGRSASLRAGGADVLTALNGGYHAAFAVGAVFAALAAL FT LAGVLLRRPQPGASAPAADAH" FT misc_feature complement(join(129132..129200,129258..129326, FT 129363..129431,129468..129536,129555..129623, FT 129651..129719,129780..129848,129861..129917, FT 129951..130019,130032..130100,130134..130202, FT 130215..130283,130317..130376,130419..130487)) FT /note="14 probable transmembrane helices predicted for FT BB2411 by TMHMM2.0 at aa 12-34, 49-68, 80-102, 107-129, FT 141-163, 168-190, 202-220, 225-247, 268-290, 300-322, FT 329-351, 364-386, 399-421 and 441-463" FT misc_feature complement(130422..130520) FT /note="Signal peptide predicted for BB2411 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.777) with cleavage site FT probability 0.512 between residues 33 and 34" FT CDS complement(130539..130958) FT /transl_table=11 FT /locus_tag="BB2412" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2132" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:Q7WJT1" FT /protein_id="CAE32906.1" FT /translation="MPQISAYLMFDGDCAEAMRLYERILGGKLDALITYGESPPEMPCE FT PQDRDLIMHARLRLDDQLLMASDSNSQCPYEGKKGFSLSLVYPTVSDAQRIFNALAEGG FT QVTMPLQKTFWAEIFGVLVDRHGTAWMISGGQMNS" FT CDS 131109..131717 FT /transl_table=11 FT /locus_tag="BB2413" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2131" FT /db_xref="GOA:Q7WJT0" FT /db_xref="InterPro:IPR003111" FT /db_xref="UniProtKB/TrEMBL:Q7WJT0" FT /protein_id="CAE32907.1" FT /translation="MAEIPLFPLSNALFPAGVLRLRVFEIRYLDMVRRCIADGSEFGVV FT VLEQGTEVRRPDGREVLARAGTMARIDHWEAPMPALLELACTGTGRFRLHACTQGKYGL FT WTGQAEPVPDDAPLEVPPELARSASALGRLIARLQREGVPPHIMPMAAPFRLDDCGWVA FT DRWAEMLSLPPADKARLLLLPPLDRLREIDAVLAADGHA" FT misc_feature 131115..131702 FT /note="HMMPfam hit to PF02190, DE ATP-dependent protease La FT (LON) domain, score 0.014" FT CDS 131730..132548 FT /transl_table=11 FT /locus_tag="BB2414" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2130" FT /db_xref="UniProtKB/TrEMBL:Q7WJS9" FT /protein_id="CAE32908.1" FT /translation="MTGTMTIRIDEELRAYIDPLTPDEYAALEQSLLAEGCRDALVLWG FT DLLVDGHNRHAICSKHGIAFNTVQNTRLQSMDDVRLWMIDNHLGRRSVSDFQRGVLALR FT KKEILESRRQAGEGDAAPAGGDGPAPLTRQTLARQARLSSATLGQIEKIRQQAAPELVR FT AVQSGEISINAAAAVATLPAPQQAAAAAGGRGELRAAARQVREARLPVRRAPEAEPAPA FT AEPRVVDDYPAEVARLDRLVAQLAEERDALKKKVVQLTVALAEARAKPGD" FT misc_feature 132120..132185 FT /note="Predicted helix-turn-helix motif with score FT 1279.000, SD 3.54 at aa 131-152, sequence FT LTRQTLARQARLSSATLGQIEK" FT CDS complement(132500..133474) FT /transl_table=11 FT /locus_tag="BB2415" FT /product="putative araC-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2129" FT /db_xref="GOA:Q7WJS8" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q7WJS8" FT /protein_id="CAE32909.1" FT /translation="MSALPDSPSASPPPRHDELASLIERHTPADGSTATALPGLNFYRS FT SSPTELNVSFYRPSLALLAQGAKRVQLGDDVYEYDTSHYLLTSFDLPVASRVTLATPGT FT PYLCFALDLDPHRIAGLISELGAPPAGQPLRRGLTLARLTEPLLDAVLRLARLLDTPAD FT IPVLAPLIEREIHYRLLSGPMGGRLRHIARAEGTALQIARAIDWLRRHYAQPLRVEHLA FT TTVNMSVSSLHHHFKAVTALSPLQYQKQLRLHEARRLMVAETLDAGAAAHRVGYESASQ FT FSREYSRLYGAPPLRDAARLRGTAPADAQSPGLARASASATVS" FT misc_feature complement(132578..132709) FT /note="HMMPfam hit to PF00165, DE Bacterial regulatory FT helix-turn-helix proteins, araC family, score 0.71" FT misc_feature complement(132728..132865) FT /note="HMMPfam hit to PF00165, DE Bacterial regulatory FT helix-turn-helix proteins, araC family, score 2.6e-07" FT misc_feature complement(132743..132877) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature complement(132764..132829) FT /note="Predicted helix-turn-helix motif with score FT 1390.000, SD 3.92 at aa 216-237, sequence FT LRVEHLATTVNMSVSSLHHHFK" FT CDS complement(133503..134564) FT /transl_table=11 FT /locus_tag="BB2416" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2128" FT /db_xref="GOA:Q7WJS7" FT /db_xref="InterPro:IPR003777" FT /db_xref="UniProtKB/TrEMBL:Q7WJS7" FT /protein_id="CAE32910.1" FT /translation="MRSIAMQAADLYVLQTAQSWLDAGQAAVLLTVARTWGSSPRPPGA FT MMAIRADGAVAGSVSGGCIEDDLIDQIRQRGIAALCPGARPALATYGVDGEQARRFGLP FT CGGTLQLVLEPLGAHSRLADLLARLRAHQTVRRSVRLADGAVTLEPAAADAEPRLDGAG FT FASVLGPRHRLLVVGAGQLSRYLCEMAIALDFDVTVSDPRQEYRAGWQVEGVALTTAMP FT DDMVIAARPDARTAVIALTHDPKLDDLALIDALQTPAFYVGALGSRANHARRVARLREH FT FGLTPAQLARLRGPAGIYIGSRTPPEIALSIMAEIVAGKNGAPLPPAASVAAGKARQPG FT GAGVIQAGLCATL" FT misc_feature complement(133590..134513) FT /note="HMMPfam hit to PF02625, DE Uncharacterized BCR, FT COG1975, score 2e-22" FT CDS complement(134561..136774) FT /transl_table=11 FT /locus_tag="BB2417" FT /product="putative exported oxidoreductase subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP2127" FT /db_xref="GOA:Q7WJS6" FT /db_xref="InterPro:IPR008274" FT /db_xref="UniProtKB/TrEMBL:Q7WJS6" FT /protein_id="CAE32911.1" FT /translation="MRIAIQNLSRRRFVQGAGGLLLGLSLPPLARRAMAAGPQAGDGFA FT ANAFVRIGADGRITVLAKHLEMGQGAYTGLATLLAEELDADWRQVRVEGAPADSARYGN FT QALGGLQGTGGSTAMFDSWEPMRRAGATARAMLVQAAAQRWQVPADTIEVAEGVLSHPA FT SGRRAGFGELAEAAARSPVPEDVPLKDPARFRLIGKHRLPRVDSAAKSDGSALYTQDMK FT LPGMLVAVVAHAPRLGAAVARVDDAAARAVPGVRAVVRFGGAALRHAGVAVLATNTWAA FT RAGRDALRIEWDEGPAYRQGSADILARYREAVGRPGSMAARKGDIDAAFAGAAKVIEAE FT YTYPYLAHAAMEPLNCLVRLDDERCEIWNGEQFQTADQRAIAQYLGMPAERITLTQLYA FT GGSFGRRASSHADYLLEAVAIARTARAQGLNAPVKLVWMREDDMRAGYYRPLNLHRARL FT ALGADGALQAVHVRMAGQSILLGTPLADWVRDGVDPVSVEGLSDLAYAVPNLQVELHTP FT TDVPVPVLWYRSVGHTHTAFSAETLIDEAAVAAGQDPVAYRLALLAAHPRHREVLQLAA FT ARAGWREPLAAGAPGTRRGRGVAVHESFRSVVAQVVEVTIAADGALKVDRVVCAVHCGL FT AVNPDVVRAQMEGGIGFALSTALHGAITLKDGAVEQSNFHDYPVLRLAEMPAVEVHIAP FT STQPPTGVGEPGVPPLAPALANAIAQATGQRLRTLPLGTTVKA" FT misc_feature complement(134717..135868) FT /note="HMMPfam hit to PF02738, DE Aldehyde oxidase and FT xanthine dehydrogenase, molybdopterin binding domain, score FT 6.3e-08" FT misc_feature complement(135884..136141) FT /note="HMMPfam hit to PF01315, DE Aldehyde oxidase and FT xanthine dehydrogenase, a/b hammerhead domain, score FT 0.00062" FT misc_feature complement(136670..136774) FT /note="Signal peptide predicted for BB2417 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.980 between residues 35 and 36" FT CDS complement(136788..137246) FT /transl_table=11 FT /locus_tag="BB2418" FT /product="putative oxidoreductase subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP2126" FT /db_xref="GOA:Q7WJS5" FT /db_xref="HSSP:1DGJ" FT /db_xref="InterPro:IPR001041" FT /db_xref="UniProtKB/TrEMBL:Q7WJS5" FT /protein_id="CAE32912.1" FT /translation="MPTLNINGKDTVLDAPGEMPLLWALRDVADLTGTKYGCGMALCGA FT CTVHADGQPIRACITPVQAVAGRRIVTIEGVAADRAGQAVQQAWRELDVAQCGYCQSGQ FT IMSAAALLRANPAPTDRDIDDAMNGNICRCATYVRIRAAIHAAAAALA" FT misc_feature complement(136809..137033) FT /note="HMMPfam hit to PF01799, DE [2Fe-2S] binding domain, FT score 4.5e-34" FT misc_feature complement(137055..137237) FT /note="HMMPfam hit to PF00111, DE 2Fe-2S iron-sulfur FT cluster binding domain, score 6.4e-09" FT misc_feature complement(137109..137135) FT /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding FT region signature." FT CDS complement(137404..137748) FT /transl_table=11 FT /locus_tag="BB2419" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2125A" FT /db_xref="UniProtKB/TrEMBL:Q7WJS4" FT /protein_id="CAE32913.1" FT /translation="MIWKLIPIALLAGLTACASGTRTDSSPPASSQTSSSAAPGSATTP FT SGPDCDAQPVQNLVGQKYSDSVGNDALRRSNSGSMRLLKPGQVMTMEYNARRLNIILEG FT NGSISALRCG" FT misc_feature complement(137656..137748) FT /note="Signal peptide predicted for BB2419 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.728 between residues 31 and 32" FT CDS 137941..138810 FT /transl_table=11 FT /locus_tag="BB2420" FT /product="putative lysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2125" FT /db_xref="GOA:Q7WJS3" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJS3" FT /protein_id="CAE32914.1" FT /translation="MAEARSFAAAGRRLGLSASTVTRAVAALEARLGILLLVRTTRHVR FT LTDAGEQFAHDCRAVLDSLAQAEEAAAGGRVQPRGELSVTAPTLFGELHVMPAIVDYLR FT QHRRVRLRALLVDRVVRLLDEGVDVAVRIGRLPDSSLTAIHVGDVRRIVCAAPDFLARA FT GVPSHPDMLPRYCTVSVVMEGQMDRWRFVCDGHARDLDVQAQLTVTSSQAAVRAAVQGW FT GLAQVVSYQAAGALREGALQVVLREFEPPPLPVHVVYPEGRKGAAKVRSFVEFCVERLR FT AELAELPA" FT misc_feature 137944..138093 FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1.9e-11" FT misc_feature 137953..138018 FT /note="Predicted helix-turn-helix motif with score FT 1663.000, SD 4.85 at aa 5-26, sequence FT RSFAAAGRRLGLSASTVTRAVA" FT misc_feature 137956..138048 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 138163..138783 FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 8.1e-37" FT CDS 138897..139910 FT /transl_table=11 FT /locus_tag="BB2421" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2124" FT /db_xref="GOA:Q7WJS2" FT /db_xref="InterPro:IPR011576" FT /db_xref="UniProtKB/TrEMBL:Q7WJS2" FT /protein_id="CAE32915.1" FT /translation="MEVVRYDIPGALMSDSLVFHTDLPGLADGPWHGGELAMQERAGAR FT ERMAQLGPRVIRDYMPQQHRDFFAQLPFMLLATVDAQGDPWASVLEGPPGFAHSPDERT FT LRLDAWPAGDDPARAGLAHGAGVGMLGIELSTRRRNRVNGHVAALDGQGFCVAVTQSFG FT NCPQYIQTRHARQAAPAPQPARWLAGLDAAARTLVGQADTLFVASYARQAGPHAVDVSH FT RGGPPGFVHLRGDTLTMPDFSGNRFFNTLGNLLANPRAGLVFVDFARGDLLQLCGRAEV FT LAEAWAPAAYPGAQRLWRVHVERAVRRPAALGLRAGFGEYAAQLAAVGQWAGEPPA" FT CDS complement(139918..141036) FT /transl_table=11 FT /gene="aroG" FT /locus_tag="BB2422" FT /product="phospho-2-dehydro-3-deoxyheptonate aldolase, FT Phe-sensitive" FT /EC_number="2.5.1.54" FT /note="ortholog of Bordetella pertussis (BX470248) BP2123" FT /db_xref="GOA:Q7WJS1" FT /db_xref="HSSP:1OAB" FT /db_xref="InterPro:IPR006218" FT /db_xref="UniProtKB/TrEMBL:Q7WJS1" FT /protein_id="CAE32916.1" FT /translation="MTRIDDPLHDREAGQADATQDTTRIDDVRIGAVRPLISPALLQDE FT LPVSAPLQALVEDSRARIADVLHGRDDRLVVVVGPCSIHDHEQAMEYARQLKEAADTLA FT DDLLIVMRVYFEKPRTTVGWKGYINDPRLDGSFRINEGLRRARHLLLEIGALGLPIATE FT FLDLLSPQYIADLIAWGAIGARTTESPSHRQLASGLSCPLGFKNGTDGGIQVAADAIVA FT ASAPHAFMGMTKMGTAAIFETRGNDDTHVILRGGKQGPNYDAAAIDACCAALAKAGLRE FT QVMVDCSHANSNKSHARQVDVARDLARQLAGGDRRIIGIMIESNLEEGRQDLKPGVPLK FT RGVSITDACLSWAQTEPVLAELAQAVRQRREG" FT misc_feature complement(139936..140916) FT /note="HMMPfam hit to PF00793, DE DAHP synthetase I family, FT score 3.8e-149" FT CDS complement(141158..141802) FT /transl_table=11 FT /locus_tag="BB2423" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2122" FT /db_xref="GOA:Q7WJS0" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/TrEMBL:Q7WJS0" FT /protein_id="CAE32917.1" FT /translation="MRAAMPEPTQLLAFALICLGMTLTPGPNMMYLVSRSLSQGYRAGL FT VSLAGVALGLVFYVLCAVLGITALLMAVPLAYEALCVAGAIYLMYMAWQALRPGGQSPF FT QVRALAPSPPRRLFAMGLFTALLNPKIAVLYLSLLPQFIDPQQGSVLTQSLALGFTQVG FT ISICVNALFTVMAGAIAVFLARRPMWMVAQRWLMGSVLAGLAVRMALDARR" FT misc_feature complement(141245..141583) FT /note="HMMPfam hit to PF01810, DE LysE type translocator, FT score 8.5e-08" FT misc_feature complement(join(141251..141319,141386..141454, FT 141527..141595,141605..141673,141707..141775)) FT /note="5 probable transmembrane helices predicted for FT BB2423 by TMHMM2.0 at aa 10-32, 44-66, 70-92, 117-139 and FT 162-184" FT CDS complement(142004..143356) FT /transl_table=11 FT /gene="gor" FT /locus_tag="BB2424" FT /product="putative glutathione reductase" FT /EC_number="1.8.1.7" FT /note="ortholog of Bordetella pertussis (BX470248) BP2120" FT /db_xref="GOA:Q7WJR9" FT /db_xref="HSSP:1GES" FT /db_xref="InterPro:IPR000815" FT /db_xref="UniProtKB/TrEMBL:Q7WJR9" FT /protein_id="CAE32918.1" FT /translation="MAFDFDLYVIGAGSGGVRAARFAAGYGARVAVAESRYLGGTCVNV FT GCVPKKLLVYGAHFHEDFEQAAGFGWNPGRPEFDWPTLIANKNREIERLNGIYRNLLVN FT SGVALHEGHARIVDPHTVEINGQRHSAQHILVATGGWPFVPDIPGKEHAITSNDAFFLP FT ELPRRVLVVGGGYIAVEFASIFNGLGAQTVQVYRRELFLRGFDGSVREHLRDELVKKGL FT DLRFNTDVERIDKRADGVLAVTLSDGSVLETDCVFYATGRRAMLDDLGLENTGVRLAES FT GYIEVDDEYRTSEPSILAIGDVIGRVPLTPVALAEGMAVARRLFRPQEYRKVDYDLIPT FT AVFSLPNIGTVGLTTEQALERGFRVTRYESRFRPMKLTLTQSQEKTLMKLVVDADSQKV FT LGCHMVGPDAGEIVQGLAVALKAGATKQVFDDTIGIHPTAAEEFVTMRTAT" FT misc_feature complement(142016..142345) FT /note="HMMPfam hit to PF02852, DE Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation domain, FT score 3.4e-46" FT misc_feature complement(142421..143341) FT /note="HMMPfam hit to PF00070, DE Pyridine FT nucleotide-disulphide oxidoreductase, score 1.4e-91" FT misc_feature complement(143210..143242) FT /note="PS00076 Pyridine nucleotide-disulphide FT oxidoreductases class-I active site." FT CDS 143531..143827 FT /transl_table=11 FT /locus_tag="BB2425" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2119" FT /db_xref="UniProtKB/TrEMBL:Q7WJR8" FT /protein_id="CAE32919.1" FT /translation="MQNEDSFFGSLGAMLGAVIRAIVDGLRYVFGGLGRALGDFFGGLA FT SALGMSPSVFNFALLVLGLLLLWTAVRAFMGRAIVAGIFWLVLAMLLLGGLIG" FT misc_feature join(143549..143617,143675..143743,143762..143821) FT /note="3 probable transmembrane helices predicted for FT BB2425 by TMHMM2.0 at aa 7-29, 49-71 and 78-97" FT CDS 143852..144229 FT /transl_table=11 FT /locus_tag="BB2426" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q7WJR7" FT /protein_id="CAE32920.1" FT /translation="MLYRFLADLVLALHALFVAFAVLGGLLALRWPRLAWLHVPAALWG FT AGIMLAGAVCPLTPLENHWRAQAGQQGYEDGFIAHYLLAAIYPEGLSRTAQTVLGALAL FT AGNALVYAALWRRRRRGGIGR" FT misc_feature 143852..143923 FT /note="Signal peptide predicted for BB2426 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.658) with cleavage site FT probability 0.338 between residues 24 and 25" FT misc_feature join(143879..143938,143951..144019,144128..144196) FT /note="3 probable transmembrane helices predicted for FT BB2426 by TMHMM2.0 at aa 10-29, 34-56 and 93-115" FT CDS 144270..144965 FT /transl_table=11 FT /locus_tag="BB2427" FT /product="probable glutathione S-transferase" FT /db_xref="GOA:Q7WJR6" FT /db_xref="HSSP:1K0D" FT /db_xref="InterPro:IPR004046" FT /db_xref="UniProtKB/TrEMBL:Q7WJR6" FT /protein_id="CAE32921.1" FT /translation="MIDLYFWATPNGLKIKLFLEEAGLPYTEHPINIGKGEQFQREFLA FT IAPNNRIPAIVDQAPAGGGAPISLFESGAILLYLAEKIGRFIPADVRGRAEVLQWLFWQ FT MGGLGPMAGQNGHFNVYAPEKVPYAIERYTAETARLYDVMDRRLAEREFLAGEYSIADI FT ACYPWVVPHEAHGQKMAHFPHLSRWFEAIAARPATARAYKEAGDSYRPKAPMSDEERAV FT LFGQPGAPR" FT misc_feature 144270..144512 FT /note="HMMPfam hit to PF02798, DE Glutathione FT S-transferase, N-terminal domain, score 1.5e-10" FT misc_feature 144531..144857 FT /note="HMMPfam hit to PF00043, DE Glutathione FT S-transferase, C-terminal domain, score 9.1e-10" FT CDS complement(144976..146457) FT /transl_table=11 FT /locus_tag="BB2428" FT /product="putative GntR-family transcriptional regulator" FT /db_xref="GOA:Q7WJR5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJR5" FT /protein_id="CAE32922.1" FT /translation="MIKSATNRLFDRAMDFAAILQQAPPAGARLPLQRQLLQRFKNAIL FT DGRLAPGSRLPASRALAQQLGISRNTVLLAYEHLAAEGYVRADRQGTRVAGLARAGMPA FT RASAASSAGPTARRLAALKASAPRTDTYLPLRPGTPALNHFPASAWRNALERALREAPA FT ALLGYGEPAGEPRLRQAIAAYLAAARGVRCEARQIVITEGAQEGLALCVRLLGNAGDTA FT WVEDPGYRGAKTALRCGDMRVVPVRVDAAGLLAPPQAWRDAPPRLIYVTPSHQYPTGAV FT LPVTRRLALIEQARRAGAWIIEDDYDSEFRHQGEPIAAMQGLVPDAPVLYVGTYSKTMF FT PSLRLGFVVLPTGLADEAAEALAEMLRGGHRHEQWALASFIESGQFTRHLNRMRRLYRE FT RQQALRAALARHLRVPHEVLGGHCGLHLTLRLPAALDDRAIAAQALRLGMAPQALSGFA FT IAPRPEDTGLVLGYGNTSAELFEPLIERLARLIQA" FT misc_feature complement(146176..146352) FT /note="HMMPfam hit to PF00392, DE Bacterial regulatory FT proteins, gntR family, score 1.5e-09" FT CDS 146534..147244 FT /transl_table=11 FT /locus_tag="BB2429" FT /product="putative GNAT-family acetyltransferase" FT /db_xref="GOA:Q7WJR4" FT /db_xref="HSSP:1NSL" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q7WJR4" FT /protein_id="CAE32923.1" FT /translation="MSARVNEFGQPIGQAMPQWQARPRPPRDPAEGRYCRLEPLDAARH FT GDDLYAAFAVPDAASGWTYLSAGPFADRAGYDEYLRKAADSADPLHHAVIDLASGRAIG FT TLSLMRIDPANGVIEVGHVNFAPALRRSPASTEAQYLLMRRAFDELGYRRYEWKCDSLN FT APSRAAALRLGFLFEGIFRQALVYKGRTRDTAWFSIIDSEWPALRAAFERWLAPENFDA FT AGRQRKRLDACRQP" FT misc_feature 146813..147061 FT /note="HMMPfam hit to PF00583, DE Acetyltransferase (GNAT) FT family, score 0.00034" FT CDS complement(147347..148273) FT /transl_table=11 FT /locus_tag="BB2430" FT /product="integral membrane protein" FT /db_xref="GOA:Q7WJR3" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7WJR3" FT /protein_id="CAE32924.1" FT /translation="MAAAAPLRRPLDGFATYVMLALCICWGFQQIAIKLVAADVSPTLQ FT IGLRSAFAAVVLIWVVLRHEGLGALRDGTLGPGLAVGALFALEFLLVGVGLEYTTASHM FT AVFLYTAPIFTALGLHLLLPDERLKPLQWLGVAVAFGGIATAFLGKGHAAVPGMLLGDL FT LGVLAGAAWGATTVAIRKSSLSEAAPAKTLFYQMLMAGLALPAFHFASGGAAPVWSGAA FT LASLGFQSVVVALSSYLAWFWLLRRYLATRLAVLSFMTPLFGVTFGVLILDEPLDSGFV FT IGAVLVLAGITLVSGAELLREKLRRRT" FT misc_feature complement(join(147374..147433,147461..147529, FT 147548..147616,147629..147697,147734..147802, FT 147830..147886,147905..147973,147986..148054, FT 148088..148147,148175..148237)) FT /note="10 probable transmembrane helices predicted for FT BB2430 by TMHMM2.0 at aa 13-33, 43-62, 74-96, 101-123, FT 130-148, 158-180, 193-215, 220-242, 249-271 and 281-300" FT misc_feature complement(147386..147766) FT /note="HMMPfam hit to PF00892, DE Integral membrane protein FT DUF6, score 2.5e-17" FT misc_feature complement(147830..148204) FT /note="HMMPfam hit to PF00892, DE Integral membrane protein FT DUF6, score 1.5e-13" FT CDS complement(148276..148611) FT /transl_table=11 FT /locus_tag="BB2431" FT /product="putative thioredoxin" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q7WJR2" FT /protein_id="CAE32925.1" FT /translation="MDQIELTDGTADRYLLDAPGLSLLVFHSRTCATCGVARQRLPEFD FT LPVDRLCWIDAGENGGLVQRYEVFHLPALFVTRDGAYYGPVSAQLADWDLRQQISLALD FT SYPAELP" FT misc_feature complement(148489..148545) FT /note="PS00194 Thioredoxin family active site." FT CDS complement(148669..149931) FT /transl_table=11 FT /gene="amaB" FT /locus_tag="BB2432" FT /product="N-carbamoyl-L-amino acid amidohydrolase" FT /EC_number="3.5.1.-" FT /db_xref="GOA:Q7WJR1" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q7WJR1" FT /protein_id="CAE32926.1" FT /translation="MTTTFPPLNAERLWSRVETLSRMTLPDVPWTRRAFSPLFEQSRQW FT LRAEFEAAGLAVRLDAGGNLVGTRPGRDAARRPIATGSHCDTVMAGGRFDGIIGVLAGI FT EVAHTLHEQGVTLEHPFEVIDFLSEEPSDYGISCVGSRALSGQLTPDMLAARNADGETL FT AEGLRRIGGDPDALGAPLRGPGQTAAFVELHIEQGPVLESRGLPIGVVTNIVGIRRVLI FT TVHGQPDHAGTTPMDIRRDALVGAARVIDAAHRRASTQSGKPHYVVATIGRIAMTPNAP FT NAVPGMVELMLEVRSDSDAVLDAFPEAIMAEVADALAALRLSAAMAPVSRAHPTDCAPL FT VMDAVEDAATRLGYASMRLPSGAGHDAVYMAPTGPIGMIFVPCLNGRSHCPEEWLEPSQ FT LLDGTRVLYETVLELDRRLSR" FT misc_feature complement(148840..149901) FT /note="HMMPfam hit to PF01546, DE Peptidase family FT M20/M25/M40, score 3.4e-07" FT CDS complement(149961..151343) FT /transl_table=11 FT /gene="norM" FT /locus_tag="BB2433" FT /product="multidrug resistance protein" FT /db_xref="GOA:Q7WJR0" FT /db_xref="InterPro:IPR002528" FT /db_xref="UniProtKB/Swiss-Prot:Q7WJR0" FT /protein_id="CAE32927.1" FT /translation="MPRSTARAAWKRELAATLALGLPLVLTNLAQMAMTVTDVIFIGRL FT GSQALAASALGANLFTAIEFFGLGLVAATAPMVAHALGRRGNAVRDVRRTVRQGLWTAV FT IYSVPGCLLLWHGEAILLAIDQPPELAAQAGAYLRALMWAMPPFLGFLVLRSFVAALQR FT PRSAFLIALAAIVLNVFGNWVLVFGNLGAPALGLVGAGLASALATLGLFLGMVGVVCLD FT RRFRRYHLFGDVWQPDWQRLAEFWKLGLPIGAATAFEVTIFNAAAFLMGWLGEPELAAH FT AIAIQIASVTFMIPYGIAQAATVRVGHAYGARQPDQVARAGWCAFSLGIGSMAIAAALM FT LLAPGLLVSAFLDIGDPANAQVLRLATAYLAVAALFQIVDGAQVLGAGMLRGLHDTRVP FT MLYAALGYWGVGLPSGAALAFWAGWRGVGVWSGLAIGLALVAVLMMQRWLRRDRVGLLR FT RA" FT misc_feature complement(join(149997..150065,150078..150146, FT 150207..150260,150303..150371,150432..150500, FT 150528..150596,150684..150752,150780..150848, FT 150867..150935,150978..151046,151107..151175, FT 151218..151286)) FT /note="12 probable transmembrane helices predicted for FT BB2433 by TMHMM2.0 at aa 20-42, 57-79, 100-122, 137-159, FT 166-188, 198-220, 250-272, 282-304, 325-347, 362-379, FT 400-422 and 427-449" FT misc_feature complement(150093..150596) FT /note="HMMPfam hit to PF01554, DE Uncharacterized membrane FT protein family UPF0013, score 2e-35" FT misc_feature complement(150792..151280) FT /note="HMMPfam hit to PF01554, DE Uncharacterized membrane FT protein family UPF0013, score 1.2e-26" FT misc_feature complement(151191..151343) FT /note="Signal peptide predicted for BB2433 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.996) with cleavage site FT probability 0.387 between residues 51 and 52" FT CDS 151531..153387 FT /transl_table=11 FT /gene="pckG" FT /gene_synonym="pck" FT /locus_tag="BB2434" FT /product="phosphoenolpyruvate carboxykinase [GTP]" FT /EC_number="4.1.1.32" FT /db_xref="GOA:Q7WJQ9" FT /db_xref="InterPro:IPR008210" FT /db_xref="UniProtKB/Swiss-Prot:Q7WJQ9" FT /protein_id="CAE32928.1" FT /translation="MNKPSEVKPVALNVPDYVKHSGLIAWVERIAALTKPDRVVWCDGS FT QEEYDRLCEQMVQGGTMRRLNPAKRANSYLACSDPSDVARVEDRTFICSEREEDAGPTN FT NWAAPQAMRETLGGLFDGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRIM FT TRMGRKVFDVLGSDGAFVPCVHSVGMPLAEGQQDVAWPCNPTKYIVHYPETREIWSFGS FT GYGGNALLGKKCFALRIASTMGRDEGWLAEHMLILGVTSPKGRKYHVAAAFPSACGKTN FT FAMLIPPHGMDGWKVTTIGDDIAWIKPGPDGRLHAINPEAGYFGVAPGTSEKTNFNAMA FT TLKANVIFTNVALTDDGDVWWEGMTDTPPAHLIDWQGQDWTPAIAAETGRKAAHPNARF FT TAPAAQCPSIDPEWENPKGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETT FT AAAAGQQGVVRRDPFAMLPFCGYNMSDYFDHWLKLGRRLEETGATLPRIYCVNWFRKGP FT DGKFVWPGFGENMRVLRWMLGRLDGQAGGVDQVFGISPAYGDIDWTGLEFSPDKFEQVI FT SVDLPAWRAELALHDELFTQLAARLPEDLPLTRTAIERRMAA" FT misc_feature 151603..153381 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00821, DE Phosphoenolpyruvate FT carboxykinase, score 0" FT misc_feature 152347..152373 FT /note="PS00505 Phosphoenolpyruvate carboxykinase (GTP) FT signature." FT CDS 153448..154071 FT /transl_table=11 FT /locus_tag="BB2435" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJQ8" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ8" FT /protein_id="CAE32929.1" FT /translation="MTLTSDDLRQIAALTLAHYDDNAVSFEVGTRDHDVSQNIAALLRH FT IQGDPPYAILDFGCGPGRDLKTFAALGHAAVGLDGAAHFVAMAHQATGCEVWQQDFLRL FT ALPAGRFDGIFANASLFHVPTQELPRVLGELRDTLKPGGVLFCSNPRGGNEEGWSRGRY FT GVWHDWESWRALLEAAGFQALEHYYRPAGLPREQQQWLASVWRR" FT CDS 154125..154592 FT /transl_table=11 FT /locus_tag="BB2436" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005122" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ7" FT /protein_id="CAE32930.1" FT /translation="MPGVASLRAQQYYGHPRNAFWPIAAELFGLDAAQPYAHRVQALQR FT AGVALWDVLQACERPGSLDAAIVADSVRPNDFQAFFAAHPGIACVGLNGAAAATLYRRH FT VLPRLHGLAHLRYVALPSTSPAHAAMDFAAKLRAWRAIAPASSDPSACLSP" FT CDS complement(154725..155588) FT /transl_table=11 FT /locus_tag="BB2437" FT /product="putative exported protein" FT /db_xref="InterPro:IPR008567" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ6" FT /protein_id="CAE32931.1" FT /translation="MSQSLFAAGAQAALADSPLIVTVAPNGAYKTAADHPAVPLTAAAL FT AAEARACLDAGAAMMHMHVRTPEGRHSLDVAAYREALAAVRQAVGEELLVQVTSEAAGV FT YRAAEQMAMVRELRPEAVSMGLREIAVPEMPERELADFLAWVAAERIMAQIILYDAADV FT ARWQALRARGLAPEGAWSVLFVLGRYSAGQVSSPRDLLPFLEVYDGSLPWAVCAFGREE FT NACVATAAAFGGHMRVGFENNLKLSDGATAPGNAALVAQAAQAGRVLGRPIATAAQARE FT IYGRLA" FT misc_feature complement(155544..155588) FT /note="Signal peptide predicted for BB2437 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.947) with cleavage site FT probability 0.898 between residues 15 and 16" FT CDS complement(155585..156547) FT /transl_table=11 FT /locus_tag="BB2438" FT /product="probable 3-hydroxybutyryl-CoA dehydrogenase" FT /EC_number="1.1.1.157" FT /db_xref="GOA:Q7WJQ5" FT /db_xref="HSSP:1F17" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ5" FT /protein_id="CAE32932.1" FT /translation="MSSPDSALGRPGASHAVVIGGGTMGADVAVVLARALCRTTVVEPD FT AARAAALPRRAADNLAQAGRAEGAAHIAVVPGLDAVEWDSVGLVIECVPERLDIKQALF FT AELARRAPAHAILASNSSSFPISAIGAGLPTRERMLGLHFFMPAHLVPLVEVVLCEASD FT PACADVLIAFMRRCGMVPVRVAQDLPGFLANRLQHALSREAFDLIDRGIASPEDVDAAV FT RFGFGFRFLAAGPVMQRDHAGIDVHAAAGATMYPTFCNADTPARCLTERAADGRHGMKA FT GTGFYAWTPETIAAERARYDRLLRAGLDLLGAELPEIQP" FT misc_feature complement(155684..155980) FT /note="HMMPfam hit to PF00725, DE 3-hydroxyacyl-CoA FT dehydrogenase, C-terminal domain, score 1.5e-18" FT misc_feature complement(155984..156520) FT /note="HMMPfam hit to PF02737, DE 3-hydroxyacyl-CoA FT dehydrogenase, NAD binding domain, score 5.9e-32" FT CDS 156662..157663 FT /transl_table=11 FT /locus_tag="BB2439" FT /product="probable LysR-family transcriptional regulator" FT /db_xref="GOA:Q7WJQ4" FT /db_xref="HSSP:1I69" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ4" FT /protein_id="CAE32933.1" FT /translation="MKINLSMRDIETVLVLGRTLNFRQAAAQLHLSQSALSTQVLRIEE FT ALGVRLFDRTTRTVRLTAAGEVFMQQAASLQVAFREAIDAVSGIASAEHGQVAVAALPS FT LAARLLPRVLMAYRQAHPGVALKVHDTLSGPAFDLVRAGEVDFALTAADPQQADLHYVP FT MMSDSFILLIPQDHALARGKGPLRWADTLAAPHVSMVHPSSVRQYAEWAFLQNRIRFQP FT AFEAEHLATIVAMVECGFGVAALPEIAAAAVAHSGIVERPLTGPVAERSIGLVTSRNRT FT LSPAAAALVAQLREHLAASAYKPAPAAPSARTTAARARSRETAPGSPGAPRR" FT misc_feature 156680..156859 FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1.5e-18" FT misc_feature 156719..156784 FT /note="Predicted helix-turn-helix motif with score FT 1367.000, SD 3.84 at aa 20-41, sequence FT LNFRQAAAQLHLSQSALSTQVL" FT misc_feature 156722..156814 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 156929..157555 FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 4.4e-47" FT CDS complement(157587..158879) FT /transl_table=11 FT /locus_tag="BB2440" FT /product="putative membrane protein" FT /db_xref="GOA:Q7WJQ3" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ3" FT /protein_id="CAE32934.1" FT /translation="MIESLSALGAMLALVFMRVPVAFAMALVGFVGLGLLRGWPPAYAM FT AGSVIYESGFQYLLSVLPLFILMGNFVTESRMSRELYAAAHALLGHRRGGLAMSTIAAC FT GGFGAICGSSLATAATMAKVAYPEMRRMGYSEKLAAGSIAAGGTLGVLIPPSIIMVVYC FT LLTEQSIGKMFAAGVLPGVLAILCYMAAVAWVVRRDPAAGPRGPRSTWPHTLHALRQVW FT MVLALIGMLLGGIYGGLFTPAEAAGVGAFLSFLFACSRRAMTWRRFLDVVVESAKTTGM FT IFVVMIGALMLANFINFTSLPQDLLDVVARHQLSPLTVILAICVIYIVLGCVLESMSMI FT LLTVPVFYPLVQSLGFDLIWFGVIVVVVTEISFITPPFGMNVFVLRGLLPGVSTPTIFR FT GVMPFVVSDVVRLAILVLFPSISLLLPSYVR" FT misc_feature complement(join(157593..157652,157740..157808, FT 157827..157931,157974..158042,158103..158207, FT 158292..158360,158385..158453,158532..158600, FT 158661..158720,158778..158846)) FT /note="10 probable transmembrane helices predicted for FT BB2440 by TMHMM2.0 at aa 12-34, 54-73, 94-116, 143-165, FT 174-196, 225-259, 280-302, 317-351, 358-380 and 410-429" FT misc_feature complement(158001..158477) FT /note="HMMPfam hit to PF00597, DE DedA family, score FT 0.0052" FT misc_feature complement(158808..158879) FT /note="Signal peptide predicted for BB2440 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.849 between residues 24 and 25" FT CDS complement(158872..159363) FT /transl_table=11 FT /locus_tag="BB2441" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ2" FT /protein_id="CAE32935.1" FT /translation="MRILDRAVTALLRAIVVISLCGMSLLTVADATGRYLLNRPIMGTV FT EMVELLMVAVIFASIPLVTRARGHITVDSFSHLFSPATLRAQDCVAGLLALTVSACLAW FT VALRKAQSTADYGDMTPMLNIPLAPFVYAMAVLLALDAAYRLAALVGPAATQPEPTQDD FT " FT misc_feature complement(join(158932..159000,159043..159096, FT 159175..159243,159271..159339)) FT /note="4 probable transmembrane helices predicted for FT BB2441 by TMHMM2.0 at aa 9-31, 41-63, 90-107 and 122-144" FT misc_feature complement(159277..159363) FT /note="Signal peptide predicted for BB2441 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.982) with cleavage site FT probability 0.885 between residues 29 and 30" FT CDS complement(159373..160404) FT /transl_table=11 FT /locus_tag="BB2442" FT /product="putative extracellular solute-binding protein" FT /db_xref="GOA:Q7WJQ1" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ1" FT /protein_id="CAE32936.1" FT /translation="MMHKTLAAALFALGLAGTAPAIAQKPVELTLSSWLPPTHAVVADF FT LMPWGEEIRKATDGRVTLRLLPKAVTNPAGHFDAVRDGLVDVTFVSHAYYPGRFQLTKF FT AVLPFSGDTATSRSIAAWDTYEKYLLKADEHKGVRLLGIYAHGPGIAFTTSKPVKQIGD FT FQGLKIRVGGGMAADVAKAVGASPIAKPAPESYELLSTGVADGVFFPAESLVSFKLDSI FT IRHATEFPGGLYSDTHAVIINRDAFARLSKQDQDTLVRLSGRHLAELAGRAWDTHDAAA FT RKVLEGGEIELVKADDALIEAVRERTKGFEQAWLDAAKAKGIDGPAALASFRAEIKQLD FT QQR" FT misc_feature complement(159442..160314) FT /note="HMMPfam hit to PF03480, DE Bacterial extracellular FT solute-binding protein, family 7, score 2.4e-19" FT misc_feature complement(160336..160404) FT /note="Signal peptide predicted for BB2442 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.983 between residues 23 and 24" FT CDS complement(160460..161419) FT /transl_table=11 FT /locus_tag="BB2443" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJQ0" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7WJQ0" FT /protein_id="CAE32937.1" FT /translation="MRVLITGANGYIGRALAERLCALPGVPGHGALEQLTLCDLAFDAA FT PADPRVRQVAGDFADPATLAAITDPPPDLVFHLACVASGRAELEFELGLRVNLEGSLRL FT LEQLRRQGRSPGLVFTSSIAVYGAPLPALVTDDTPLAPALSYGAQKQAVEILLADYTRR FT GFVRGRAVRLPGVAPRPPAPNGAWSAFSSTLLRALAAGQPCEMPVGPQATLWLMSLPCC FT VDNLLRAAELTAQAPPPGGRTGWTLPALRVSVRDIVQAFDARSQGAATPLVSYAPRPDI FT EAQFGNQPPLQCDAAQAAGFRHDGSLPALLERAVGPPP" FT CDS complement(161407..162213) FT /transl_table=11 FT /locus_tag="BB2444" FT /product="putative exported protein" FT /db_xref="HSSP:1K77" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:Q7WJP9" FT /protein_id="CAE32938.1" FT /translation="MKLAANLTLLYPGLPLAARMAAAREDGFAGVEILFPYDQPPAQLA FT AQLREHGLALALVNTPLGAAGEKGLACVPGREADFGAALDQALALCRATGCRIVHAMAG FT MPPAPAGMDECRATLIGNLQRAAPRAAQAGVTLTLEPLNRADMPGYFYYLPEQAADIIR FT AVDHPNVGLQFDIYHNLREGLDPHAELRRVLPLVRHVQFAGPDGRHEPDPASPPVAATL FT RLLAQSGYGGWVGCEYTPRGLASAGLKAWRGAYDAACGSGGAACAS" FT misc_feature complement(162145..162213) FT /note="Signal peptide predicted for BB2444 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.867) with cleavage site FT probability 0.708 between residues 23 and 24" FT CDS complement(162210..163106) FT /transl_table=11 FT /locus_tag="BB2445" FT /product="probable dehydrogenase" FT /db_xref="GOA:Q7WJP8" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7WJP8" FT /protein_id="CAE32939.1" FT /translation="MSATLAFCGAGLMGAPMIRRLLAAGHRVRVWNRSAAKAQALAADG FT AVVCATPAEAAAGAQAVLLCLTDLAAVQATVFGPHGVADVAGGLLVDHSSIEPDATRAL FT AARLLAASGRVWIDAPVSGGVAGAQAGTLSILAGGPAAAIEAAQPWLRAYAGRVTRLGD FT TGAGQIGKLCNQTIVATTVNAIAEAVALARRNGIDAAALDTALAGGWADSVLLRIFVPR FT MTAPVDQPLGALQTMLKDLENVAALAAASGTQLRGLQGVLDSYRTAAARGLGPGDLSDI FT VRVAWPERPAAPAREPA" FT misc_feature complement(162594..163103) FT /note="HMMPfam hit to PF03446, DE NAD binding domain of FT 6-phosphogluconate dehydrogenase, score 0.00021" FT misc_feature complement(163038..163106) FT /note="Signal peptide predicted for BB2445 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.715) with cleavage site FT probability 0.695 between residues 23 and 24" FT CDS complement(163103..164815) FT /transl_table=11 FT /gene="ilvD" FT /locus_tag="BB2446" FT /product="dihydroxy-acid dehydratase" FT /EC_number="4.2.1.9" FT /db_xref="GOA:Q7WJP7" FT /db_xref="InterPro:IPR000581" FT /db_xref="UniProtKB/Swiss-Prot:Q7WJP7" FT /protein_id="CAE32940.1" FT /translation="MSLHKHRSRMVTQGLTRTPHRAFLRATGFDDAALEKSMVGIVSTQ FT GENTPCSMALGPQADRARLGVAAGGGVPVSFSTISISDGTSMNHAGMRMSLLSRETIAD FT SVELVVRGHAYDALVAFAGCDKTLPAMMMAIVRLNVPAVFLYGGATLPGHAASGQVTIL FT DTIEAVGRVQHGTMPAAELKAMERTCTPSAGSCPGQFTANTMAMVGEALGLSPLGSAMM FT PAVYSERLAIAQRAGEHVMRALAAGGPLPRQLVTRASLENACAAVAATGGSTNAALHIP FT AIAHEAGIAFTLDDVARVFKRTPLIADLQPGGRYLARDLHEAGGVPVVLKALLDGGHID FT GSVLTLDGRTLAEALADTPAPDGKVVRACGQALHPTGGVAVLKGNLSPDGALLKIAGLK FT SLKFSGPARVFENEEACMRAVSTHAYQPGEVLVIRNEGPRGGPGMREMLSVTAALYGQG FT MGEKVALLTDGRFSGATRGLCIGYAGPEAAAGGPIALLRDGDMIHIDAEADTLDVALSD FT EELARRRAAYQAPPQARLAGALEKYAALVRPACLGAVTHSGQVDWPYETPEAE" FT misc_feature complement(163148..164710) FT /note="HMMPfam hit to PF00920, DE Dehydratase family, score FT 2e-241" FT misc_feature complement(163391..163426) FT /note="PS00887 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 2." FT misc_feature complement(164414..164446) FT /note="PS00886 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 1." FT CDS complement(164856..165536) FT /transl_table=11 FT /locus_tag="BB2447" FT /product="putative GntR-family transcriptional regulator" FT /db_xref="GOA:Q7WJP6" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJP6" FT /protein_id="CAE32941.1" FT /translation="MPALTHPDPLVHTSVNEAIYRRLRDHLMRGDYAAGAVLGIQELAD FT AFGTSAMPVREALRRLVTQRALEPMKSRSVRVPVISRASLEDIRRARVLIEGHVTAWAV FT EHITAPELAELRALADQIGRSLSDTASVQAGLENNQRFHFTIYRAARSDSMLATIESLW FT LQSGPYLRATRELMHSDERPSAELHAAIVDAIARRDAESARAVMAQDISWAFDRLQALQ FT PAMP" FT misc_feature complement(164874..164903) FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature complement(165306..165482) FT /note="HMMPfam hit to PF00392, DE Bacterial regulatory FT proteins, gntR family, score 0.00024" FT misc_feature complement(165360..165425) FT /note="Predicted helix-turn-helix motif with score FT 1427.000, SD 4.05 at aa 38-59, sequence FT LGIQELADAFGTSAMPVREALR" FT CDS complement(165732..167222) FT /transl_table=11 FT /locus_tag="BB2448" FT /product="putative exported protein" FT /note="Similar to Rhizobium meliloti hypothetical signal FT peptide protein smc01185 r01608 or smc01185 SWALL:Q92PW5 FT (EMBL:AL591787) (495 aa) fasta scores: E(): 2.1e-147, FT 71.51% id in 488 aa" FT /db_xref="InterPro:IPR010679" FT /db_xref="UniProtKB/TrEMBL:Q7WJP5" FT /protein_id="CAE32942.1" FT /translation="MHLPPKLALTTGVLLVALPLATPAWGQPPTPASPLVQQLNNGNWL FT DPKEAETLRDELYYQRAIHAYMTMLPALNVIGMRDGSEKVFGAGYNVLPVWKERMDART FT MVPTPNADVIYSMSYLDLKKTGPLVVKAPANVIGMFTDFFQRTLTDVGAIGPDRARGGL FT YLILPPDYDGHVPSSYFVVKSPTYNVFLFFRTIMGQGKGKPDPAPAVKAAETTRVYPLW FT AEEKDIKPMEFPDGSGKHINMMYPVDQEYWTKLKEFVDYEPVSAIDPELRGVLASIGIV FT KGQPFKPTAREQELLKRAVETAPKMILAMRQLGREDKRHLYYKDRQWERAWAGATAEWM FT QDSYLDVNQRATFFQIAYSSAPAMVMRTTGAGSKYPFTARDANGEFLNGSATYKLRMPP FT DAPAALFWAVTAYNVTDGTMPETDQLMPSTNGYYDIPKQKDGSTEIWFGPQKPADVADA FT AFIKTIPNRNFLVTLRLYGAEDAFYDQTWKPDDVVKVK" FT misc_feature complement(167145..167222) FT /note="Signal peptide predicted for BB2448 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.996 between residues 26 and 27" FT CDS complement(167306..168757) FT /transl_table=11 FT /locus_tag="BB2449" FT /product="putative exported protein" FT /note="Similar to Rhizobium meliloti hypothetical FT transmembrane protein smc01184 r01609 or smc01184 FT SWALL:Q92PW4 (EMBL:AL591787) (512 aa) fasta scores: E(): FT 2.8e-135, 68.44% id in 469 aa" FT /db_xref="InterPro:IPR010679" FT /db_xref="UniProtKB/TrEMBL:Q7WJP4" FT /protein_id="CAE32943.1" FT /translation="MKRCLAILAFAALLFPALPAYSAPARQPSSNTPPPDIVMHPEYAR FT TIGRLAYVWGWPMVNMLNRNARITKAPHPGLLGGILPAAPRGQVGMLHDYILPAETFVT FT CPNQDVVYGLGFFSLDTEPVIAQVPDFGDRFWVYALYDHRTNQFGELGKPYRSKPGFYL FT LVGPNWKGQKPAGVQAIIRSPTALANAIPRIFMDDTDEDRQAIQKKINQVVFYPLKDFD FT GKMKSLDWQSTADIPNPGADSANAGETRWVVPEEFFNQFGQVLDMVPPLPGEEAMYVQF FT RSMMDAAAKDPAIKNALVEVAKETEEQVIAPFFQWKHNGKPAGNNWNRSVNNAQTGLDY FT FNRTGTAKSNMFDNRPNETQYFYTDFDSTGAVLDGGKRYEITFASGQLPPVKGFWSLTL FT YNKHHLFSPNDLNRYSLGTKNKNLVRGPDGSLTIHVGPTSPGKDKEANWLPSPREPISL FT YIRAYWGEQAILDGTWKPPAVKKIE" FT misc_feature complement(168692..168757) FT /note="Signal peptide predicted for BB2449 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.998 between residues 22 and 23" FT CDS 169012..169920 FT /transl_table=11 FT /locus_tag="BB2450" FT /product="hypothetical protein" FT /note="Weakly similar to Pseudomonas putida EbdR protein FT ebdR SWALL:Q9K4R5 (EMBL:AJ293588) (332 aa) fasta scores: FT E(): 0.036, 25.81% id in 275 aa" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q7WJP3" FT /protein_id="CAE32944.1" FT /translation="MQLRRFDSFGEFESAVVDVDLKVRLLGPRDGRWKLGHIDVDGITV FT QRGVEAVPNLCEASGWPAHLMLLLSAGRPVPTWLNGLPFAEGTVGVLAPGRGFVFRAAG FT PNEWMTIALPSASSLFEADNETGRVLRSWCQSTRILDAAPFAIGQLRKAALVAADARTP FT RAAGRVLIEQAVVALAQSSRQPHSAILGRPGISPHAICDAALALLKMMDARRLADLPIS FT SRSQRKFFKQCFGLGPAQYLHLIRLHGIHEALQDVRGSLVSIAETFERHGYPYSAYALA FT RYQAIFGELPSATRKGPKAVR" FT CDS complement(169959..170645) FT /transl_table=11 FT /locus_tag="BB2451" FT /product="probable GntR-family transcriptional regulator" FT /db_xref="GOA:Q7WJP2" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJP2" FT /protein_id="CAE32945.1" FT /translation="MTLTALPADPPPADALDLDLAVEQLEEDIVFGRLFPRQRLTEDEL FT MARFGLKRHAVRQVLAQLEQRGAVERKRNVGAEVRAFTAREVMDLYDLRELLETRAAER FT IALPVDEARLAALVAVQREHDAAVAAGNARRVFRSNQRFHRELFGLLDNPVLQQAIEEY FT ARRTHPIRFGSLAAAGYRERARQEHWAMIQALRQGDRAALVALCRNHLLPSRDAYLAAA FT GLRAGV" FT misc_feature complement(170409..170585) FT /note="HMMPfam hit to PF00392, DE Bacterial regulatory FT proteins, gntR family, score 4e-08" FT misc_feature complement(170457..170531) FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT misc_feature complement(170463..170528) FT /note="Predicted helix-turn-helix motif with score 988.000, FT SD 2.55 at aa 40-61, sequence LTEDELMARFGLKRHAVRQVLA" FT CDS complement(170652..172394) FT /transl_table=11 FT /gene="ilvD" FT /locus_tag="BB2452" FT /product="putative dihydroxy-acid dehydratase" FT /db_xref="GOA:Q7WJP1" FT /db_xref="InterPro:IPR000581" FT /db_xref="UniProtKB/TrEMBL:Q7WJP1" FT /protein_id="CAE32946.1" FT /translation="MTQRDQGGKPPGGLSKGLTNYGDTGFSLFLRKAFIKGAGYTDDAL FT ARPVIGIVNTGSSYNPCHGNAPQLVEAVKRGVMLAGGLPVDFPTISVHESFSQPTSMYL FT RNLMSMDTEEMIRAQPMDAVVLIGGCDKTVPAQLMGAASAGVPAIQLVTGSMLTGSHRG FT ERVGACTDCRRYWGRYRADEIDTAEITDVNNQLVASVGTCSVMGTASTMACLTEALGMM FT ISGGASAPAVTADRIRVAERTGATAVAMAAARLTPERILTGKAIENALRVLLAIGGSTN FT GIVHLTAIAGRLGIDIDLAGLDRMSRETPVLVDLKPSGQHYMEDFHKAGGMPALLRELR FT PLLHLDALTVSGRTLGEELDAAPAPFAQEVIRALDAPIYPVGGLAVLRGNLAPGGAIIK FT QSAADARLMEHEGRAVVFEDAEDMARRIDDDALDVTADDILVLKRIGPTGAPGMPEAGY FT MPIPRKLARAGVKDMVRVSDGRMSGTAAGTIVLHVTPEAAIGGPLAHVRNGDRIRLSVR FT QREISLLVSEAELAQRAAAQPIERPQAERGYRKLFLDTVTQADQGVDFDFLRAPASKQT FT VPPR" FT misc_feature complement(170697..172256) FT /note="HMMPfam hit to PF00920, DE Dehydratase family, score FT 5.4e-190" FT misc_feature complement(171975..172007) FT /note="PS00886 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 1." FT CDS 172627..173631 FT /transl_table=11 FT /locus_tag="BB2453" FT /product="putative exported protein" FT /db_xref="GOA:Q7WJP0" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJP0" FT /protein_id="CAE32947.1" FT /translation="MSDRQSARLPRRAALCSMLALCAGFALQPVAAQSAYPDRPIRMIV FT PYPPGGATDVIGRVLAKEMSGALGQSVVVENRAGAAGNIGADVVAKATPDGYTILMGAM FT TSHAINAVLYQGRVSYDIEKSFAPVAIVGTVPLVFVVNPAVPADSLQSLIALAKSKPGY FT LTMASAGNGSPQHLAGEMFKRVAGVDLLHVPYKGSGPAMTDLMGGQVLSMIETVPAAQG FT NVKGGKLRALAVASAQRVESLPDVPTTAEAGLPNFQVSSMFGIAAPAGTPAPVVERLNA FT VLKEALAKPEVQTALLNQGAISTWTTPADAAARISAERQQWATVIAEAGVKAE" FT misc_feature 172627..172719 FT /note="Signal peptide predicted for BB2453 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.485 between residues 31 and 32" FT misc_feature 172792..173619 FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 2.4e-116" FT CDS complement(173645..175282) FT /transl_table=11 FT /gene="alkJ" FT /gene_synonym="alcO" FT /locus_tag="BB2454" FT /product="alcohol dehydrogenase [acceptor]" FT /EC_number="1.1.99.-" FT /db_xref="GOA:Q7WJN9" FT /db_xref="InterPro:IPR012132" FT /db_xref="UniProtKB/TrEMBL:Q7WJN9" FT /protein_id="CAE32948.1" FT /translation="MPPALCASYDYIIVGAGSAGCVLANRLTADPACRVLLLEAGGEDR FT NFWLRLPVGYFRSIYDPRFSWQFPVEPQAETGERPIVWPRGRVLGGSSSINGLIYIRGQ FT HADYDDWARAGAQGWGYRDVLPYFRKSERYSGGASEYHGGAGELCVSDLRNDHPLCRDW FT VEAGLQAGFDPNPDFNGARDSGLGNYQLTLKGRWRCSAATAFLHPVRGRPNLTVLTGVR FT VTRLLIDGGVCRGVEWVDERRRGQPVRTQADAEVLLAAGALQSPQLLQLSGVGPAELLR FT RHGVAVQVDAPEVGRNLQDHYQARVIVKLKHPLSLNDDVRKPLKMLGMGARWLLRQDGP FT LTVGAGQVGGMVCSEHARDGRADVLFNVMPLSVDKPGDALHGFSGFSASATQCRPLSRG FT TVALRSADPFEAPRIVANYLTDPHDIKVLVAGLKLLREIYHQPAFRQHLSGEEYMPGAA FT IRGDADLEQFARTRGGTVFHASGSCRMGGDPASVVDPELRVRGVDRLRLIDASVMPAMV FT SANTNAAAILIGEKGADLVRGRQRLDAA" FT misc_feature complement(173687..175258) FT /note="HMMPfam hit to PF00732, DE GMC oxidoreductase, score FT 1.7e-180" FT misc_feature complement(174458..174502) FT /note="PS00624 GMC oxidoreductases signature 2." FT misc_feature complement(174956..175027) FT /note="PS00623 GMC oxidoreductases signature 1." FT misc_feature complement(175220..175252) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(175299..176306) FT /transl_table=11 FT /locus_tag="BB2455" FT /product="putative exported protein" FT /db_xref="GOA:Q7WJN8" FT /db_xref="InterPro:IPR019546" FT /db_xref="UniProtKB/TrEMBL:Q7WJN8" FT /protein_id="CAE32949.1" FT /translation="MMNPQRRTLLKTGALAAAMAGIGIPSLARARDKVRVGYLHTPAVD FT GQIWTGQQTGAFAKHGLDLELIQFTTGLELFQAMIGGSLDMLSTGAVVSNFPARGQGKV FT FLVNNIEYATAQLWVRDDAGIKTLADLKGKKISTTTGTTAHVFLDRALRSVGLQAGKDV FT QIVNQRMAEAVTSFISGAVPAVALWVPFDVTIRQKLPGARKLLDASTFYPEAAIVGGWA FT ARNDYYDKNPKIINALIQAWAETNDYLLSHTDEALVALQKNHYQQVPLPDLKEQFKASK FT YFTAAEWRQRYADGTVTRWLQQVTDFFVQSANIAQPVPAERYFDPKPYLEAVRA" FT misc_feature complement(176217..176306) FT /note="Signal peptide predicted for BB2455 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.887 between residues 30 and 31" FT CDS complement(176329..177150) FT /transl_table=11 FT /locus_tag="BB2456" FT /product="ATP-binding component of ABC transporter" FT /db_xref="GOA:Q7WJN7" FT /db_xref="HSSP:1F3O" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7WJN7" FT /protein_id="CAE32950.1" FT /translation="MSATPASDVRIRFEDVCVDYPTADGPMRVLDGINYEIRQGEFVSV FT IGPSGCGKTTMMGLVGGFVQPTAGRVLLDGQPVGGPGPDRGVIFQEYGVFPWLTVRENI FT AFGLNLRSNRVAAGERAQICQRYMTLMGLGDFAHHYPKHLSGGMRQRLALARAYAVKPQ FT FLLMDEPFGALDAQTRSAMQDLLLQVQMTEGKTVMLITHSVEEAIYLSSRIVVVTARPA FT RIRTIIDVPFGYPRAENLHEDPRFGELRSHIRALVMEEYAKQARQTVRLSD" FT misc_feature complement(176491..177033) FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 2.3e-56" FT misc_feature complement(176677..176721) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(176989..177012) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(177170..177937) FT /transl_table=11 FT /locus_tag="BB2457" FT /product="permease component of ABC transporter" FT /db_xref="GOA:Q7WJN6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7WJN6" FT /protein_id="CAE32951.1" FT /translation="MKRRSALMRALLVLAPWLLIVLLWYGIRASGLVSPALVPSPGEVW FT TRFVALMQARLPHDILMSTQRVFVGVCLGTLLAVPVGFVLGWYRGVRSFIDPVINFFRA FT LPPIALIPLVIVYFGIGETAKIAILFYASFFAGVIVMYEGISQINPIFVRVAKTLGATD FT GEIFRKVIVPLTIPHMLTALRVALGVAWATLVASELIAAQQGLGALIQDASSFFQLDII FT YVGIICIGFIALAMDLALRAAARRLVAWQDRIA" FT misc_feature complement(join(177206..177274,177317..177385, FT 177494..177562,177575..177643,177677..177745, FT 177857..177925)) FT /note="6 probable transmembrane helices predicted for FT BB2457 by TMHMM2.0 at aa 5-27, 65-87, 99-121, 126-148, FT 185-207 and 222-244" FT misc_feature complement(177293..177508) FT /note="HMMPfam hit to PF00528, DE Binding-protein-dependent FT transport systems inner membrane component, score 4.8e-12" FT misc_feature complement(177419..177505) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT misc_feature complement(177521..177568) FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT misc_feature complement(177845..177937) FT /note="Signal peptide predicted for BB2457 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.899) with cleavage site FT probability 0.228 between residues 31 and 32" FT CDS 178037..178762 FT /transl_table=11 FT /locus_tag="BB2458" FT /product="putative GntR-family transcriptional regulator" FT /db_xref="GOA:Q7WJN5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJN5" FT /protein_id="CAE32952.1" FT /translation="MAINFHDSPIPRYLQLADLMRQRIARGQWGQGHRLPSLEELVAEF FT GVARVTVRQAIDVLTREGLVSPQQGRGTFVTGLPPNDRWLQVQTTLAELAKVYRDTKPK FT IVNIDETITNPPLTAQDGVAAERYVYMRRVHEREGRPYCVINIYLDEQIFRRDPVRYRN FT ETVIPLLVSDPALRIARAHQVLTIGTADMEVAGHLQVPVNTPIAEVRRLFLDEAGKVVY FT LSEVSYRGDFIHLEMNLIP" FT misc_feature 178082..178261 FT /note="HMMPfam hit to PF00392, DE Bacterial regulatory FT proteins, gntR family, score 8.6e-18" FT misc_feature 178142..178207 FT /note="Predicted helix-turn-helix motif with score FT 1250.000, SD 3.44 at aa 36-57, sequence FT PSLEELVAEFGVARVTVRQAID" FT CDS 178770..179918 FT /transl_table=11 FT /locus_tag="BB2459" FT /product="putative mandelate racemase/muconate lactonizing FT enzyme" FT /db_xref="GOA:Q7WJN4" FT /db_xref="InterPro:IPR018110" FT /db_xref="PDB:3DDM" FT /db_xref="UniProtKB/TrEMBL:Q7WJN4" FT /protein_id="CAE32953.1" FT /translation="MTRDAASITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVED FT SDGAVGWGEVWCNFPACGAEHRARLVETVLAPLLTARAFADPAQAFAHLEARTAVLAIQ FT TGEPGPLAQAIAGLDIALCDLAARRAGQPLWAWLGGSGDRIGVYASGINPENPEDVVAR FT KAAEGYRAFKLKVGFDDARDVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGP FT AQLDWLEEPLRADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLA FT KWGGFSGCLPVARAVVAAGLRYCPHYLGAGIGLQASAHLLAAVPGLASPGLLEVDANDN FT PLRSLLSPALATLHEGRITLGGAPGLGVTPDLAALRAACAAR" FT misc_feature 178791..179186 FT /note="HMMPfam hit to PF02746, DE Mandelate racemase / FT muconate lactonizing enzyme, N-terminal domain, score FT 4.6e-13" FT misc_feature 179148..179906 FT /note="HMMPfam hit to PF01188, DE Mandelate racemase / FT muconate lactonizing enzyme, C-terminal domain, score FT 7.8e-11" FT misc_feature 179367..179462 FT /note="PS00909 Mandelate racemase / muconate lactonizing FT enzyme family signature 2." FT CDS complement(179934..180854) FT /transl_table=11 FT /locus_tag="BB2460" FT /product="probable LysR-family transcriptional regulator" FT /db_xref="GOA:Q7WJN3" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJN3" FT /protein_id="CAE32954.1" FT /translation="MDRFDSLQLFTRIVELGSFSRAAAALDIPRATATHAIKQLEARLG FT ARLLDRTTRHVRATPDGQAFYERCVHVLSELDDAQSSLQRVASNPRGLLRVDMHSTHAT FT KIVLPRIDDFRARYPGIDLAVSGGDRLVDLVREGIDCVIRAGNPRDSSLVARRLAVMPQ FT VICASPEYLAAFGAPRHPDELAAHRVVKFFAASAAVDYPLELRIGGEIRAFALNGWISV FT SDAENYVVCALRGCGLIQLPRFHVEDDLRAGRLVEVLSDWPSPDLPVSALYPSHRHLSP FT RVRVFVDWLGKLYEEAFPAAAPARR" FT misc_feature complement(179970..180596) FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 6.3e-46" FT misc_feature complement(180666..180845) FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 6.4e-17" FT misc_feature complement(180711..180803) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature complement(180741..180806) FT /note="Predicted helix-turn-helix motif with score FT 1200.000, SD 3.27 at aa 17-38, sequence FT GSFSRAAAALDIPRATATHAIK" FT CDS 180969..181709 FT /transl_table=11 FT /locus_tag="BB2461" FT /product="probable short-chain dehydrogenase" FT /db_xref="GOA:Q7WJN2" FT /db_xref="HSSP:1Q7B" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7WJN2" FT /protein_id="CAE32955.1" FT /translation="MNMDISKAAIVTGGSRGIGRAIAARLAADGFAVVVNYAGNGAKAH FT ETVAAIESAGGKAIAIQGDVGKPQDVANLFAQARAAFGRIDVVVNSAGVMPMASIDVAN FT LDAFDQVIATNLRGAFLVLAQAAANLGDDGRIIALSTSVIAKSLPGYGPYIASKAGVEG FT LVHVLANELRGRNITVNAIAPGPVGTDLFFNGKSEEAVASIARQAPMERIGMPDEIAAA FT VSFLAGPDGRWVNAQVLRVNGGFA" FT misc_feature 180981..181703 FT /note="HMMPfam hit to PF00106, DE short chain FT dehydrogenase, score 1.1e-65" FT CDS complement(181841..182533) FT /transl_table=11 FT /locus_tag="BB2462" FT /product="putative lipoprotein" FT /db_xref="GOA:Q7WJN1" FT /db_xref="InterPro:IPR001915" FT /db_xref="UniProtKB/TrEMBL:Q7WJN1" FT /protein_id="CAE32956.1" FT /translation="MDTNSLLSAGSDMAKAANLSDADIIQLSDAACKQSDQESKIAPAG FT NKYSVRLTKLMRGFGNMTLNGQKVNYKVYMTEDVNAWAMGNGCVRVYTGLMDLMNDDEL FT RGVIGHEMGHVALGHTKKAMQTAYAVSAARQAAGAAGNSVVASLSASQLGEMTEKFINA FT QFSQSQETAADDFSFDLLTEKKMNRKGLVTAFQKLAELDGGESSMFSSHPSSPDRAARM FT EKRLQAGK" FT misc_feature complement(181847..182347) FT /note="HMMPfam hit to PF01435, DE Peptidase family M48, FT score 5.2e-05" FT CDS 182894..183316 FT /transl_table=11 FT /locus_tag="BB2463" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:Q7WJN0" FT /protein_id="CAE32957.1" FT /translation="MQANLTVITLGVDDLERALRFYRDGLGLPTAGIVGREFEHGAVVF FT IDLQAGLKLALWPRRSLAHDTGLPLAPPSATELSLGHNVTSRAEVDAVMAQAAQAGAAI FT VKPAGDTFWGGYAGYFQDPDGHLWEVVHNPQLAPAG" FT misc_feature 182924..183307 FT /note="HMMPfam hit to PF00903, DE Glyoxalase/Bleomycin FT resistance protein/Dioxygenase superfamily, score 4.7e-12" FT CDS 183438..184631 FT /transl_table=11 FT /locus_tag="BB2464" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7WJM9" FT /protein_id="CAE32958.1" FT /translation="MPSRSAQSSSNVLRLAAAQALAGANTTVVYATAAIIGEALAPSKS FT LATLPISVFVVGMAASTLPAGAVAQRHGRRAAFMLGTLCGVLLGLLAALGIYLESFALF FT CAAMAFGGAYAAVVLTFRFAAAECVEPHRKARALSTVLAGGVLAGVLGPQLVSYTMDAW FT SGHVFAGTYLAASAVAVLAAVVLGGVDLPRPARAAAAGGRPLRVIARQPRFIAAVVCGV FT VTYMLMNFLMTSAPLAMRMHGLSQHASNLGVQWHVIAMYAPSFVAGGLITRHGAVPVVA FT AGLLLTAAAAVVGLAGMDAWHFWVSLTLLGVGWNFGFAGASAMVLECHLPQERTRVQAA FT NDFIIFGTMVVGSFVSGDLLMRYGWEVVCWLALPPLAVAAFALRWFKPLPAGAAGSA" FT misc_feature 183438..183530 FT /note="Signal peptide predicted for BB2464 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.971) with cleavage site FT probability 0.415 between residues 31 and 32" FT misc_feature join(183495..183563,183576..183644,183663..183731, FT 183744..183812,183849..183908,183936..184004, FT 184080..184148,184191..184250,184263..184331, FT 184359..184427,184464..184532) FT /note="11 probable transmembrane helices predicted for FT BB2464 by TMHMM2.0 at aa 20-42, 47-69, 76-98, 103-125, FT 138-157, 167-189, 215-237, 252-271, 276-298, 308-330 and FT 343-365" FT CDS complement(184638..185609) FT /transl_table=11 FT /locus_tag="BB2465" FT /product="probable LysR-family transcriptional regulator" FT /db_xref="GOA:Q7WJM8" FT /db_xref="HSSP:1I69" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q7WJM8" FT /protein_id="CAE32959.1" FT /translation="MKNEKILEFHNPLVMSYPTPMLTNWIDRLRPRHLRLLIRLCETGN FT LTEVANEYGISQPALSKWLKDLEADIGQRLFVREPRGVTPTACARELQAHARAIIGRLE FT RARTAVDHIASGFAGHLSVGFSPVVGPVVLPESIRRFRAAYPDVLVSVIEASIDLLLPG FT LRNGDFDIVVGRLEEVAMPEDVRCETLYDEPVCLVAGRAHPLAGRRRISWEDAQAYPWI FT SPQQGTPLRMRLEMELAVAGQPLPRHAVESTSVQTNVALLDRSDMIAPMSRRLAEHFQR FT QGVLRILPLTLGSGGPIGMLWRADGVHGTHTAHFIACLRQAV" FT misc_feature complement(184644..185270) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 5.3e-41" FT misc_feature complement(185340..185519) FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1.6e-18" FT misc_feature complement(185385..185477) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature complement(185415..185480) FT /note="Predicted helix-turn-helix motif with score FT 2346.000, SD 7.18 at aa 44-65, sequence FT GNLTEVANEYGISQPALSKWLK" FT CDS 185676..187262 FT /transl_table=11 FT /locus_tag="BB2466" FT /product="probable sulfatase" FT /db_xref="GOA:Q7WJM7" FT /db_xref="HSSP:1E33" FT /db_xref="InterPro:IPR000917" FT /db_xref="UniProtKB/TrEMBL:Q7WJM7" FT /protein_id="CAE32960.1" FT /translation="MSQPNFLLFITDQHRADHLGAYGNSQIRTPALDALARRGWLAERF FT YVASPICMPNRATLMTGRMPSAHGARHNGIPLSQRATTFVERLRQAGYGTALVGKSHLQ FT NMTGNGPVWPRPQDPPAEGEAWAPEPGDYDQEWGPLWREDPAHDLATPFYGFSQVDLAV FT DHGDRVWGHYWRWLQREHPEVAAQAGPDHALPAPGFELVRAGQAWRTRVPESCSTTAYL FT GRRTMQALDGYAQRGQPFFIQCSFPDPHHPFTPPGKYWDMYRPEDVELPASFHASAAAG FT RQPPPHVQWMYAQRDSGRAVKHTPAMFACTEREAREAIALNYGSISHIDHTVGEVLAHL FT QRLGLADNTVVIFTSDHGDYLGDHQLLWKGPVHYQSVIRTPFIWADPAGAQGARSDALC FT STTDIAPTILARAGLLPYNGIQGADLGALMRGEQAAPREAVLIEEEGQRVMFGFDKRVR FT MRTLQTGRYRMSVYHGVSWGELYDLREDPLELRNLWDEPGSAALRQDLLFQLAQNLIGH FT GETSPHPTALA" FT misc_feature 185685..187136 FT /note="HMMPfam hit to PF00884, DE Sulfatase, score 7.9e-27" FT misc_feature 185955..185978 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 187304..188281 FT /transl_table=11 FT /locus_tag="BB2467" FT /product="putative exported protein" FT /db_xref="GOA:Q7WJM6" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJM6" FT /protein_id="CAE32961.1" FT /translation="MRIFQALRHAALAAALSLGAAAAATAAYPDKPVRLVVNFTPAGPL FT DLLARLVAERASRELGQTVIVENRAGAGGNIGADVVAKSAPDGYTLLITTDTLATVNPF FT VYASMPADPFKDLQPVALTGTFNQVLVVQPSLGVRNLADYMAYLRQHGGTYASAGNATP FT GHLTFESLRQALDLDVTHVPYRGTAPAVNDLLGGQVEAGFLVVPGVLQHIQAGKLVPLA FT VSGAQRDAALPDVPTIAESGLAQVRDFDTSFGYLLMAPAGVPDEAVQAWQRVLARIYAS FT PEFLERLAALDIAPTFGDAQQAAQWMRTRAARWEKVVAAAGIKP" FT misc_feature 187304..187381 FT /note="Signal peptide predicted for BB2467 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.605 between residues 26 and 27" FT misc_feature 187445..188272 FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 1.7e-80" FT CDS complement(188302..188814) FT /transl_table=11 FT /locus_tag="BB2468" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q7WJM5" FT /protein_id="CAE32962.1" FT /translation="MMRHERLRFWLAGLAAAATGWLCYAGLARLAGALGVATWIPYPAP FT RRQWLLIGESWQSAEFSGAIADASVFLTALAAVAAYYCARIVYHLSFAPVRQRRARWLI FT AGWIVGTVAMVALSQGLGWLYGAFPGFARIGWLSAALGFAVLAGAASGFARAWGRLMRA FT RKVPATE" FT misc_feature complement(join(188344..188412,188440..188508, FT 188545..188613,188728..188796)) FT /note="4 probable transmembrane helices predicted for FT BB2468 by TMHMM2.0 at aa 7-29, 68-90, 103-125 and 135-157" FT misc_feature complement(188722..188814) FT /note="Signal peptide predicted for BB2468 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.990) with cleavage site FT probability 0.348 between residues 31 and 32" FT CDS 189313..190818 FT /transl_table=11 FT /locus_tag="BB2469" FT /product="probable membrane protein" FT /db_xref="InterPro:IPR002823" FT /db_xref="UniProtKB/TrEMBL:Q7WJM4" FT /protein_id="CAE32963.1" FT /translation="MELLQNLALGFSVAFTPENLLYALLGCVLGTLVGVLPGLGPVPTI FT AMLLPITYVLPPVAGLIMLAGIYYGTQYGGSTTAILVNLPGETSAVVTVLDGHQMARNG FT RAGAALALAAIGSFFAGTVATMLIAAFAPPLAEVAFKFGPAEYFSLMVLGLIGAVVLAS FT GSILKAVAMIILGLLLGMVGTDVNSGVARYDFGIPELQDGIDFAIVAMGVFGFAEILTN FT LEQKENRVDITDKVGSLYPNKQEMREAAPAIVRGTALGSCLGILPGGGSVLSAFASYSL FT EKKLSRNPERFGKGHPAGLAGPESANNAGAQTSFIPLLTLGIPGNAVMALMVGAMTIHN FT IQPGPQVMTSHPELFWGLIASMWIGNLMLVVLNLPLVGLWVKLLKVPYRILYPAILVFC FT TIGVYSLNYNVFDVFVTAIFGVVGYVWSKLKCEGAPLLLGLVLGPMMEENFRRALLLSR FT GDFLTFVERPLSASLLGAAALLVIIVALPSIRKKRDETFVEEE" FT misc_feature 189367..190626 FT /note="HMMPfam hit to PF01970, DE Integral membrane protein FT DUF112, score 6.5e-116" FT misc_feature join(189370..189438,189451..189519,189529..189597, FT 189634..189702,189745..189813,189817..189885, FT 189928..189981,190261..190329,190387..190455, FT 190474..190542,190702..190770) FT /note="11 probable transmembrane helices predicted for FT BB2469 by TMHMM2.0 at aa 20-42, 47-69, 73-95, 108-130, FT 145-167, 169-191, 206-223, 317-339, 359-381, 388-410 and FT 464-486" FT misc_feature 189505..189552 FT /note="PS00225 Crystallins beta and gamma 'Greek key' motif FT signature." FT CDS complement(190916..191380) FT /transl_table=11 FT /locus_tag="BB2470" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJM3" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q7WJM3" FT /protein_id="CAE32964.1" FT /translation="MSDVQTSSPSPAPPRGRKLDKADFAALADLRYALRRFMAFSEAAA FT TESGLTAQQHQALLAIKASDDTLSVGELADRLLIRHHSAGELVDRLARMDMVRRIPSNA FT DRRRVLVALTPLAEHTLDTLSAAHVEELRSVGPLLRTLLSYFDSPAYRRK" FT CDS complement(191490..191915) FT /transl_table=11 FT /gene="stbB" FT /locus_tag="BB2471" FT /product="putative plasmid stability protein" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:Q7WJM2" FT /protein_id="CAE32965.1" FT /translation="MILLDTDVLLEPLRPAPDPAVAAWLDGQHVETLYLAAPGAAEIQL FT GLARLPRGKRAEALRHEFERRILPLFMGHVLPFDTAAADAYAAVMMRAAAAGHALCAID FT GCIAAIATAHGLAIATRHPARFEAAGLAAVDPWHAAA" FT misc_feature complement(191508..191912) FT /note="HMMPfam hit to PF01850, DE PIN domain, score FT 2.8e-09" FT CDS complement(191912..192151) FT /transl_table=11 FT /gene="stbC" FT /locus_tag="BB2472" FT /product="putative plasmid stability protein" FT /db_xref="GOA:Q7WJM1" FT /db_xref="InterPro:IPR005569" FT /db_xref="UniProtKB/TrEMBL:Q7WJM1" FT /protein_id="CAE32966.1" FT /translation="MSSITVRNVPEEVHRALRVRAATHGRSTEAEIRAILENAVLPDGR FT VKLGTLLSHIGRGARGMDLTIERNPAPARPASFE" FT CDS complement(192225..193067) FT /transl_table=11 FT /locus_tag="BB2473" FT /product="putative AraC-family transcriptional regulator" FT /db_xref="GOA:Q7WJM0" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q7WJM0" FT /protein_id="CAE32967.1" FT /translation="MDRLSALLERFRVRTALFHAGTLCGHHRFEAQPGRAFLHVLRRGD FT MEVRHRPGETALPRLRLAEPTLLFYPRPLHHEFINPPAEGPDLTCATLDFEGGDRHPLV FT RSLPPVVCVPLDAVAGLRPALDLLFAEADQVRCGSRVLADRLFEVVLIQLLRWMLDHPA FT QVGVSNGLIMGLSDPRLAKALAALHGAPGQAWPLTRMADIAGMSRSAFAAAFKTATGVT FT PAAYLADWRLSLAASMLRAGHPMKRIAPELGFAGVPALSKAFRQRMGASARQWLDAQR" FT misc_feature complement(192237..192365) FT /note="HMMPfam hit to PF00165, DE Bacterial regulatory FT helix-turn-helix proteins, araC family, score 0.85" FT misc_feature complement(192252..192377) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature complement(192384..192521) FT /note="HMMPfam hit to PF00165, DE Bacterial regulatory FT helix-turn-helix proteins, araC family, score 8e-07" FT misc_feature complement(192399..192533) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature complement(192420..192485) FT /note="Predicted helix-turn-helix motif with score FT 1446.000, SD 4.11 at aa 195-216, sequence FT WPLTRMADIAGMSRSAFAAAFK" FT CDS 193205..193750 FT /transl_table=11 FT /gene="mip" FT /locus_tag="BB2474" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR010195" FT /db_xref="UniProtKB/TrEMBL:Q7WJL9" FT /protein_id="CAE32968.1" FT /translation="MSRVPLIDPSQAGAERQAILAQIQGAFGATPNMFKAVANSAAALK FT SMWEAFGALGGGVIAARLGEQIAVAVANRNRCEYCLAAHTALGRKAGASAGDMAAAQDG FT RSADPRTAAALRFALQLVEARGQVGEAEVQAVRAAGFSDEEIVEILAHVALNLFTNYVN FT VAFAVPVDFPKVALRQAA" FT CDS 193809..194321 FT /transl_table=11 FT /locus_tag="BB2475" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7WJL8" FT /db_xref="InterPro:IPR017936" FT /db_xref="UniProtKB/TrEMBL:Q7WJL8" FT /protein_id="CAE32969.1" FT /translation="MSRHEALATVTAPPLQVDAWLNTPHPLELARLRGQVVVLHAFQML FT CPGCLAHGLPQAERLHRLFRDDGVVVIGLHTVFEHHAVMGPEALRVFNHEYRWSFPIGI FT DRPDPEGDMPMTMRAYSLGGTPSLVLLDRRGRIRLHHLGRLDDLALGAAIGRLLAEDAE FT SAGAPPA" FT CDS 194348..194635 FT /transl_table=11 FT /locus_tag="BB2476" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q7WJL7" FT /protein_id="CAE32970.1" FT /translation="MREARPRAGRAFATGGDGMTGKTAFRIGDHVAWNSEAGQVSGTII FT AIHTRDFDYKGHTHRASPDHPQYEIKSDKTDHIAAHRGEVLRRVRAKGGA" FT misc_feature 194393..194416 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 194426..194512 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 194632..195192 FT /transl_table=11 FT /locus_tag="BB2477" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR014519" FT /db_xref="UniProtKB/TrEMBL:Q7WJL6" FT /protein_id="CAE32971.1" FT /translation="MRPPFHTIGHSNRSLEAFVALLEAAGIELVVDIRTVPRSRANPQF FT NQDALPGSLDGRGIAYEHLAALGGLRPRSRTVPREVNGYWDNDSFHNYADYALSQAFHA FT GLEHLVARGRAQRSAVMCSEAVWWRCHRRIVADHLLARGETVFHIMEAGRIDPASLTPG FT ALVRPDGMVVYPGADAAVRPPMP" FT CDS 195270..196316 FT /transl_table=11 FT /locus_tag="BB2478" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR006314" FT /db_xref="UniProtKB/TrEMBL:Q7WJL5" FT /protein_id="CAE32972.1" FT /translation="MPQNNPEPQAVVSPITRSAIFLVATVGADNEAADKVRALCGKLAD FT LARAVGKRVPAGNLSCVCGFSAAGWDRLFGQPRPAELHPFREFSAGERRAPATPGDLLL FT HIRAEQMDLCFELATHVMAQLGDAVTVVDEVHGFRYFDLRSLVGFVDGTENPTGREALD FT FTLVDDADPDFAGGSYVLVQKYLHDMDGWNALSVETQERIIGRTKLSDIELDEAVKPSN FT SHSALTTLEENGQEIKILRDNMPFGRPGSGEFGTYFIGYARSPAPIEQMLENMVVGRPP FT GNYDRLLDFSRAVTGGLFFAPSADLLEALAERDPQDTDGSRPDPAPAARAPHDGSLNIG FT SLKGNPQQ" FT CDS 196313..197116 FT /transl_table=11 FT /gene="linM18" FT /locus_tag="BB2479" FT /product="bacteriocin" FT /db_xref="GOA:Q7WJL4" FT /db_xref="InterPro:IPR007544" FT /db_xref="UniProtKB/TrEMBL:Q7WJL4" FT /protein_id="CAE32973.1" FT /translation="MNNLYRDLAPISAAAWAQIEEEVARTFKRSVAGRRVVDVKDPGGF FT GLAAVGTGHLRGIAAPQKGVDAKLREVKALVELTVPFELQRDEIDAVERGANDADWQPA FT KDAATELAYAEDRAIFDGYKAAGIVGIREGSSNSRLELPTDAADYPAAVGRALEQLRLA FT GVDGPYSVLLGADAYTALSEGSDDGYPTIDHIKRIVSGDIIWAPALNGGCVLSTRGGDF FT ELHLGQDLSIGYQSHTDKVVRLYLRETLTFLMLTSEASVPVAPKG" FT CDS complement(197171..198469) FT /transl_table=11 FT /locus_tag="BB2480" FT /product="putative membrane protein" FT /db_xref="GOA:Q7WJL3" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q7WJL3" FT /protein_id="CAE32974.1" FT /translation="MDAVLILTVILGLFGLLLVLGIPIFAALGVPSILGIYLVGGASAL FT NVVPSVLHRGIASYSLICIPLFILMGETLARTSIGARLYTLFYTWLSRVRCSLAIASVG FT ASAIFGAMSGVSVAGAATIGRVAIPEMLKRRYDPGLAGGSVAAAGSLALLIPPSVGFVL FT YGEIASQSIGKLFSAAIVPGLLLSVLMMLYLYGLSRIKPSVAPDEAQKVSWRERWQALR FT DVWAAIVLIVAVLGTIYLGIATPTEASGLGAAGALLVALGYRELDRAKLREIVRSTIVT FT SSMILLIVAAALLFGHVLMRLQAPQMLIAWVAALAQPDWVILLLILVFLLIVGMFLDIV FT SIILITTPIVLPVITSLGLDPIWFGVVMIIMCEMAVITPPIGLNLYVIKGVAPEISLRD FT ITMGALPFVLVEALAVLILVLFPQLALWLPSHM" FT misc_feature complement(join(197189..197257,197318..197386, FT 197444..197512,197573..197641,197732..197800, FT 197879..197947,197984..198052,198113..198181, FT 198239..198307,198326..198379,198389..198457)) FT /note="11 probable transmembrane helices predicted for FT BB2480 by TMHMM2.0 at aa 5-27, 31-48, 55-77, 97-119, FT 140-162, 175-197, 224-246, 277-299, 320-342, 362-384 and FT 405-427" FT misc_feature complement(198383..198469) FT /note="Signal peptide predicted for BB2480 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.952) with cleavage site FT probability 0.644 between residues 29 and 30" FT CDS complement(198473..198994) FT /transl_table=11 FT /locus_tag="BB2481" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q7WJL2" FT /protein_id="CAE32975.1" FT /translation="MKSLLDRLTRIGHGTNRAAVFIAQAALLLMMLLTVYSVIARYVLQ FT QPSVHAVEISIYLLLLVTWLSVGWTHLLERHVSMEMLSIRVRGRGKRLLNVFRELVVLV FT FCGFLLHAGVQIAATALARNYRSTSLLAFPMWIAYGLIAVGALLLAIAAACKLNHPDGN FT AAIAPPSPEA" FT misc_feature complement(join(198536..198604,198647..198715, FT 198776..198835,198878..198937)) FT /note="4 probable transmembrane helices predicted for FT BB2481 by TMHMM2.0 at aa 20-39, 54-73, 94-116 and 131-153" FT misc_feature complement(198860..198994) FT /note="Signal peptide predicted for BB2481 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.714) with cleavage site FT probability 0.340 between residues 45 and 46" FT CDS complement(199036..200043) FT /transl_table=11 FT /locus_tag="BB2482" FT /product="putative extracellular solute-binding protein" FT /db_xref="GOA:Q7WJL1" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q7WJL1" FT /protein_id="CAE32976.1" FT /translation="MNKTWIAKLLPAVLLALSANAGAADKPIELTLSTYAPPSYEYMWK FT PLETFIAYVEKESQGRVKIKAFHSAQLFDGYEELPALSRGDIDITTVVSTYASGAMPVL FT NLFTMPFVFQDTAHLERAAKAGLLDVSIRGEMRDKHGIEVLGLAPIDPYQIYSRRAPVR FT TAADFKGKVWATTGAADARAIQLLGGSPTSMPSSELYLALDRGVVDGTPRPLITGLGRS FT LHEVVKHLSLATLAIDTSLLSMNKAKFDSLPPDIQDIIRRGAQVRDEEQFRQVYAYIEQ FT GVAKFEKNGVSVYTIEPAALQDMRAATQPAVQEWVAQEPAASRHLELLEKTRAN" FT misc_feature complement(199087..199950) FT /note="HMMPfam hit to PF03480, DE Bacterial extracellular FT solute-binding protein, family 7, score 2.7e-49" FT misc_feature complement(199975..200043) FT /note="Signal peptide predicted for BB2482 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.987 between residues 23 and 24" FT CDS complement(200068..200694) FT /transl_table=11 FT /locus_tag="BB2483" FT /product="putative isochorismatase" FT /db_xref="GOA:Q7WJL0" FT /db_xref="HSSP:1ILW" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:Q7WJL0" FT /protein_id="CAE32977.1" FT /translation="MLDLDNARGGFIGSHPFGRRPALVVIDFQRAFTDPDVSPLASDCA FT PAIAQANRLIQAMRGRGPVVFTVVGYDGNHGDGGCFHRKCPPLKDLVRGSAGCALDERL FT DYDAATDVLLHKTQASAFFGTPLAAMLAHAGCDAVLIAGCTTSGCVRASAVDAMQHGFP FT PFVAQDAVTDRSAAQHLSNLIDLKSKYAEVLPTDALLPLLLNPTA" FT misc_feature complement(200092..200640) FT /note="HMMPfam hit to PF00857, DE Isochorismatase family, FT score 4.1e-09" FT CDS complement(201269..202090) FT /transl_table=11 FT /locus_tag="BB2484" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2117" FT /db_xref="GOA:Q7WJK9" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q7WJK9" FT /protein_id="CAE32978.1" FT /translation="MILGGAPGHEYDLHYIPAPLRRRHHSQAMSQAANPTALPAWDPPA FT ILAQLRANTCFGHMAEPTLAAFAAIAQWRRLDHGELLAGRGTPAPGVVIILKGAIHTSS FT FSDDGHEFALSMLEFDGLWGVAAVLDGGGMLRDSRAYQQTDILLLPRAAFLDILDGDPG FT LYRYFVKLLCSRIRTAHAIIDELALRSLPQRLPRLLGALTAGRPGDDERGIAVAQTQDA FT LATLLGVSRHAVNRELRQLANQGLVGLGYGEIWVRDLERLKRLWHERGAQP" FT misc_feature complement(201374..201439) FT /note="Predicted helix-turn-helix motif with score FT 1508.000, SD 4.32 at aa 218-239, sequence FT QTQDALATLLGVSRHAVNRELR" FT misc_feature complement(201602..201883) FT /note="HMMPfam hit to PF00027, DE Cyclic nucleotide-binding FT domain, score 0.042" FT CDS 202129..203100 FT /transl_table=11 FT /locus_tag="BB2485" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2116" FT /db_xref="GOA:Q7WJK8" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7WJK8" FT /protein_id="CAE32979.1" FT /translation="MKIKSMLLAVLAVSMAGVSAAALSQGFPERALRVVVPYPPGGTTD FT VLVRLLQKPVADAAGQSVVVDNRPGGASVIGTSHVAQAAPDGYTVLGGDLSMLVNPSLM FT KDLPYDTLRDFRGVTMLARAPLVLLVHPSVPANTLDELIALAKAKPGTLNFASGGYGTS FT THMAGEMFRRAAGIDVVHVPYQGVAPAMSALLGGQVQMYFGGTTTGLPHIQSGKLRALA FT VTGEAPSPLLPEVPTFVSRGIQGVNADTYWGVYAPARTPDAVIEKLNAYYTGALRDPAV FT QQRTRDLGLTLIGNSAAEHTAQMKTMIGDWGAFVKEADIRLE" FT misc_feature 202129..202200 FT /note="Signal peptide predicted for BB2485 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.485 between residues 24 and 25" FT misc_feature 202267..203088 FT /note="HMMPfam hit to PF03401, DE Uncharacterized protein FT family, UPF0065, score 3.2e-92" FT CDS 203104..203958 FT /transl_table=11 FT /locus_tag="BB2486" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2115" FT /db_xref="GOA:Q7WJK7" FT /db_xref="InterPro:IPR002509" FT /db_xref="UniProtKB/TrEMBL:Q7WJK7" FT /protein_id="CAE32980.1" FT /translation="MAAKQSLVCLTFDFDAISVWLARGMDSPTPVSRGEFCAVAADRVL FT DLLERLGLPSTWFIPGHTLASYPEHCRRVHEAGHEIGHHGWTHVAPNLMTREEELDGLV FT RANEAIRALTGRAARGYRSPSWDLSPHTLALLLEHGFDYDSSMMGHDYLPYPVRQGDSF FT PLDEPAVFGAPTRLIEVPVSWSLDDYPHFEFVRAGQSVIPGLMNANSVMDNWIEDFLYL FT KENFDWGVITYTFHPFVIGRGHRMRMLERLLRRLIDEGATFVRMEEAVDAYRQRQALAA FT GAA" FT misc_feature 203182..203637 FT /note="HMMPfam hit to PF01522, DE Polysaccharide FT deacetylase, score 2.1e-11" FT CDS 203977..204795 FT /transl_table=11 FT /locus_tag="BB2487" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2114" FT /db_xref="GOA:Q7WJK6" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7WJK6" FT /protein_id="CAE32981.1" FT /translation="MMQHYYERDGVRLSYYLDDYTDPWTQAPTLLLLHGAMANAQRFYS FT WVPGLSRDYRVVRADLRGHGLSDVPPADKPLDLQVLTEDILALLDHLGCERVHLAGNSA FT GGYVGQHLAMQHPQRIETLALFGSAPGLRNSQASTWLERVAEKGLRQFLADTIDDRFPP FT ELVGTPRCEQFLDALSDHDMAYIGRFVGYMAQQEWGDQLHRITCPTLVVIPGAGRIGAM FT DAYQPMRDHLKRAEILVYEGERHSICEYLPQRCVADLRSFLARHGGPAWP" FT misc_feature 204136..204765 FT /note="HMMPfam hit to PF00561, DE alpha/beta hydrolase FT fold, score 6e-19" FT CDS 204815..206275 FT /transl_table=11 FT /locus_tag="BB2488" FT /product="putative amidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2113" FT /db_xref="GOA:Q7WJK5" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q7WJK5" FT /protein_id="CAE32982.1" FT /translation="MASVMNIEQYVQQDGLALSAQLRAGATDPQALMQCAITLARQRAE FT PLNALCYPDYDAALARAAAWRPTGVFGGLPFLLKDSGLACDRLPSSIGLALCKDMRFAG FT NATLVERFDAAGLLPFARTTVPALCMAPTTEALVNGGPARNPWAPQRSAGGSSGGAAIA FT VATGVVPLAHGSDGGGSIRIPASCCGVFGLKPSRGLVPLGPARGEAWGGMAGDGVLSRS FT VRDTAAALDAIAGMERGAPYAAPASPAGGYLAALARPFERPLRIGVWQHAWDGIEVDPA FT CSAALAQAEALCRQLGHATEAIAAPPIDYQAFVRAHIGILCTHIALAVDARLAVLRRGL FT RDDDLEPAILDGYRRARGISATDYAGMIQALHAVGRAMAACMQGYDLLLSPTLTRPPVP FT LGEISMADDFVSFRQKAARYTTFLAVINASGQPAASVPLHIDGQGLPIGVQLIGALGRD FT DLVLRLAAQLERAAPWAGRFPPAAGAGA" FT misc_feature 204920..206200 FT /note="HMMPfam hit to PF01425, DE Amidase, score 8.2e-67" FT CDS 206278..207066 FT /transl_table=11 FT /locus_tag="BB2489" FT /product="putative oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2112" FT /db_xref="GOA:Q7WJK4" FT /db_xref="HSSP:1GZ6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7WJK4" FT /protein_id="CAE32983.1" FT /translation="MAGRTDCAPAAGRLAGRVALITGAAGGIGSAAALRFAAEGAALAL FT LDRRPDAIEQLAGRICGQGGQAIGVAADVTDDDSVRQAVRRAVEHFGRIDTLFNCAGGS FT VAGDTAVDKVELALWNRTLRLDLDGTMLCCRHAVPAIVRAGGGAVVNMSSGAGLRGSFG FT GHAYTAAKGAVIALTRALAAEYAPHGVRVNAICAGRIRTERILRNLDAGAPAQAGAAQR FT YPCREGDPIDIAHIALFLASHESRMITGEAIAANGGYSAF" FT misc_feature 206320..207054 FT /note="HMMPfam hit to PF00106, DE short chain FT dehydrogenase, score 4.6e-72" FT misc_feature 206737..206823 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT misc_feature 207441..213309 FT /note="Low %GC phage-related region." FT CDS 207468..209462 FT /transl_table=11 FT /locus_tag="BB2490" FT /product="abortive infection phage resistance protein" FT /note="Similar to Lactococcus lactis abortive infection FT phage resistance protein abiu SWALL:Q9F9J7 (EMBL:AF188839) FT (589 aa) fasta scores: E(): 2.3e-36, 30.17% id in 570 aa" FT /db_xref="InterPro:IPR018891" FT /db_xref="UniProtKB/TrEMBL:Q7WJK3" FT /protein_id="CAE32984.1" FT /translation="MAKNDRILLDGIVDDRIATRTPSEKRDEAFEYLAFEQLLKDYDLS FT HDELLHGAVDGERDGGIDGFFILVNGHLLDDPESFVWPRSSAELRLILVTCKHHETFKQ FT ATLDSLVATLTELLDFAIDDKDLKGAYSDRLLRVRSNLKFAYRKLSPRLNSFSVSAYYA FT SRGDTQELGAEVAARGEQIALLIRESFGACQAEFAFVGATELVELHRKIRNYTLELPFV FT EALTKGVRYVLLARLTDYFNFVTDGGRLRRYLFDSNVRDFMGMNRVNEDIQNTLRGAES FT PDFWWLNNGVTMLASSAAITGKSIQISDIQIVNGLQTTESIFRYFQGRDLAKDQRCVLV FT KVIITNDEAVRDAIIRATNNQTDVELASLHATDKIQRDVEDIFLRHGLFYERRKNYYAN FT QGRSPAELVTPLYAAAGYLALALKEPHKASKLRSRFMRVPASYEQIFDESAPLDVWPKI FT VQTLKRVDEALEALRPRGKGTERFLKGWRYVIALILVAQHFGKFSYSKRELTTFDVSTV FT TFDSVKGVWAELYAPDNGVRMVGWTSLRDVVAACQIVSKSRGIRDVEAISRGSQGVHMR FT SQDLSAQFIESVRQALPAQPWKPGVHIEVSRKLKCDIPAYRAAVEQLIEDGIFLRQKDG FT VLYDEEGSVVSFDPERVDPETLQLRPADE" FT CDS complement(join(209777..209983,209986..210597)) FT /pseudo FT /transl_table=11 FT /locus_tag="BB2491" FT /product="putative transposase (pseudogene)" FT /note="Similar to Xanthomonas campestris transposase FT SWALL:Q9Z3E4 (EMBL:U62552) (350 aa) fasta scores: E(): FT 3.5e-47, 50% id in 254 aa, and to Ralstonia solanacearum FT isrso14-transposase orfb protein SWALL:Q8XF72 FT (EMBL:AL646083) (275 aa) fasta scores: E(): 7e-52, 54.21% FT id in 249 aa" FT misc_feature complement(join(209834..209983,209986..210306)) FT /note="HMMPfam hit to PF00665, DE Integrase core domain, FT score 8.4e-31" FT misc_feature complement(210529..210597) FT /note="Signal peptide predicted for BB2491 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.785) with cleavage site FT probability 0.784 between residues 23 and 24" FT CDS complement(210636..210896) FT /transl_table=11 FT /locus_tag="BB2492" FT /product="transposase" FT /note="Similar to Caulobacter crescentus insertion sequence FT IS511 orfa and orfb genes, complete cds cc2741 and cc0514 FT and cc2291 and cc2689 SWALL:Q45992 (EMBL:U39501) (88 aa) FT fasta scores: E(): 8.2e-19, 67.81% id in 87 aa, and to FT Agrobacterium tumefaciens IS3 family transposase orfa or FT atu4605 or agr_l_545 SWALL:Q8U750 (EMBL:AE009388) (88 aa) FT fasta scores: E(): 2.9e-21, 75.29% id in 85 aa" FT /db_xref="GOA:Q7WJK2" FT /db_xref="InterPro:IPR002514" FT /db_xref="UniProtKB/TrEMBL:Q7WJK2" FT /protein_id="CAE32986.1" FT /translation="MKKRFTEEQIVGVLKEAEVGAKVAELCRKYGISEATYYNWKVKFG FT GMAVSEAQRLKELEQENNKLKKLLAESMLDKAALQDLLSRK" FT misc_feature complement(210642..210890) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF01527, DE Transposase, score FT 4.9e-27" FT misc_feature complement(210771..210836) FT /note="Predicted helix-turn-helix motif with score FT 1304.000, SD 3.63 at aa 21-42, sequence FT AKVAELCRKYGISEATYYNWKV" FT CDS complement(211125..212336) FT /transl_table=11 FT /locus_tag="BB2493" FT /product="putative phage-related DNA-binding protein" FT /note="Similar to Streptomyces coelicolor putative FT DNA-binding protein sco3537 or sce2.18C SWALL:Q9X8B2 FT (EMBL:AL049645) (390 aa) fasta scores: E(): 1.3e-17, 29.85% FT id in 345 aa, and to Neisseria meningitidis transcriptional FT regulator, hth_3 family nmb2012 SWALL:Q9JXJ6 FT (EMBL:AE002551) (363 aa) fasta scores: E(): 6.9e-18, 27.83% FT id in 370 aa" FT /db_xref="GOA:Q7WJK1" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q7WJK1" FT /protein_id="CAE32987.1" FT /translation="MSRGGVQGFQQERLSQILAARRLTQVQLASMVEVSPATISKWRSG FT AQAPERDALERLATVVNVTPEWFTRSPATKMSLPLFRSNASAHVAARAMLEARLEWTQD FT VAAALMEYVDYPDVNLPIRTYTDPEEITAEDIEKAACECRDMWRLGRSAIQDLALAVEG FT AGIILVREETGIAQIEGLSAWSEVLGRPLILLSADKDNGYRSRFDLAHEIGHLVLHRYI FT KRPTERTRHKLLEQQAHRFAGAFLLPAETFATEVRVPPTLDDLLLLKRRWGVSAAAIIM FT RLKALHLVNEDGALMLFKRRSARWGAKSEPGDNDRKPEKPRLLRRTIDLLVEEKVMPLE FT AIPRHIGLAAVDVEALAGLPEGYFQEKASVVLEFARLKTAQKPSTDHPGQGNNVVQFRP FT LSKS" FT misc_feature complement(212133..212297) FT /note="HMMPfam hit to PF01381, DE Helix-turn-helix, score FT 8.5e-09" FT misc_feature complement(212205..212270) FT /note="Predicted helix-turn-helix motif with score FT 1764.000, SD 5.19 at aa 23-44, sequence FT LTQVQLASMVEVSPATISKWRS" FT CDS complement(212333..212989) FT /transl_table=11 FT /locus_tag="BB2494" FT /product="putative phage-related hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q7WJK0" FT /protein_id="CAE32988.1" FT /translation="MSQPTQETIQDLLVRNIPRGLVMALEEAMLVGAQRAYAAARGMDD FT GHLPSVVGHLRHFHMNESFHRTLTVGGASPSPLRGNRIVTGRAGIFTLARFNTKYGTWN FT SARRSETRKQMSLANAAIEPLVQPGFFSEYVPPSDGVVFIVAGFAGSLHTQPETPISID FT LAVPDRNMYGWLFREPITAFLKRYDQKSTTAQNDLAKPKLKKNIGKQQDKDGTGS" FT tRNA complement(213422..213497) FT /note="tRNA Ala anticodon CGC, Cove score 84.28" FT CDS complement(213585..215090) FT /transl_table=11 FT /locus_tag="BB2495" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2111" FT /db_xref="InterPro:IPR010799" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ9" FT /protein_id="CAE32989.1" FT /translation="MHILVAGFQHETNTFAPSKAGYDNFLRGEGFPALVRGDDLLALRA FT VNIPAGGFLNAALADGHSVHPVIWAGASPSAHVTRDAFERIAGEIEAAARAGRYDAVYL FT DLHGAMATEHHDDGEGELLRRLRDAVGPATPIVASLDLHANVTRAMLAHASALVAYRTY FT PHVDMADTGARAAALLQARAQAGKHWHGAARRLPFLIPINGMCTQLEPARGVYALLAEL FT ERSEPGIASLSCALGFPAADFPECSPVVWAHGPDRDAVERAVQTLADRIAGLEAQWAPD FT FLAPDEAIRQARQLAQGARRPVVIADTQDNPGAGGDANTTGMLRALIDADADNAAIGLM FT CDPQAVAQALAAGVGKRVRLRLGGQSGVAGDAPCEAEFIVEHQSDGKTRYDGPMMHGMA FT ADLGSTVCLRHRGVRVIVSSNKSQTLDRNLIRLGGIDPEDLAILVVKSSVHFRADFEPI FT AHAVLIAKAPGPMQADPADLPWTRLAPGMRTRPRGRPFVPARP" FT CDS complement(215132..215914) FT /transl_table=11 FT /locus_tag="BB2496" FT /product="putative exodeoxyribonuclease III" FT /EC_number="3.1.11.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP2110" FT /db_xref="GOA:Q7WJJ8" FT /db_xref="HSSP:1AKO" FT /db_xref="InterPro:IPR000097" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ8" FT /protein_id="CAE32990.1" FT /translation="MKLATWNVNSLNVRLPQVLDWLAANPVDALCIQELKLTDDKFPLD FT AFTEAGYHAAWAGQKTYNGVAIISREPGFALVRNNPRYEDPQQRILAVTLPSPAGDVRV FT ICAYCPNGQSVDSDKYVYKLAWFDGLRDWLEEEMRTYPRLAILGDYNVAPADADVHNPE FT KWEGQVLVSEPERAAFRALLDLGLTDSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHV FT LLSDALKPHCVACVIDKAPRANEQPSDHAPVIATLAFG" FT misc_feature complement(215144..215914) FT /note="HMMPfam hit to PF03372, DE FT Endonuclease/Exonuclease/phosphatase family, score 7e-42" FT misc_feature complement(215240..215275) FT /note="PS00728 AP endonucleases family 1 signature 3." FT CDS complement(215984..216430) FT /transl_table=11 FT /locus_tag="BB2497" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2109" FT /db_xref="InterPro:IPR007418" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ7" FT /protein_id="CAE32991.1" FT /translation="MTYPILLALHLLAAFVFIGTVFFEVLILESVRRQVPREAMNAVER FT GIGNRARAIMPWVLLALFGAGIGMAWQHRGALEQPLASSFGLLLSLKIVLALSVLGHFA FT AAMRWRRRGQLRGRRSRRLHLSVFCHVVAIVLLAKGMYYIDALR" FT misc_feature complement(join(215996..216064,216122..216190, FT 216218..216286,216347..216415)) FT /note="4 probable transmembrane helices predicted for FT BB2497 by TMHMM2.0 at aa 6-28, 49-71, 81-103 and 123-145" FT CDS complement(216427..217653) FT /transl_table=11 FT /locus_tag="BB2498" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2108" FT /db_xref="InterPro:IPR010266" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ6" FT /protein_id="CAE32992.1" FT /translation="MAELLQIDEPAAARAAPQWRAFLELGFRPLYLVGAAWGALSVALW FT IGAPQWLGGAMAGVIWHAHEMLWGFIGAIAVGFLLTAAATWTGVNPLRGAPLAALAALW FT LAARAAFLLPGMAAFWTGVACELLFFAWAAAALGRAIYRRGASRRNDGVPLLVLGLGAA FT DALYLLAARAGDYPLLLQRFNAGLLCMAVIALLIARRIIPFFAMRAIAGLQIPMHTRSG FT QWQLAAGLVAVAATLAQAGALTAVALAAAGLIALAQWLSWRPWATRGVPLLWILYAGYL FT GLAAGLLVAAASAAGGIARAAWPAHVIGMAGFGLLIIGMITRTALGHLGRPLRTDRLML FT ACYLLVIGAAALRLAALWPGPHTLAALHGATAAWVLAFVLYLWRFAPLLVRPRLRAPTA FT AATPVRSRP" FT misc_feature complement(join(216496..216564,216583..216642, FT 216685..216753,216772..216840,216883..216978, FT 217036..217104,217132..217200,217261..217329, FT 217387..217455,217492..217560)) FT /note="10 probable transmembrane helices predicted for FT BB2498 by TMHMM2.0 at aa 32-54, 67-89, 109-131, 152-174, FT 184-206, 226-257, 272-294, 301-323, 338-357 and 364-386" FT CDS complement(217646..218050) FT /transl_table=11 FT /locus_tag="BB2499" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2107" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ5" FT /protein_id="CAE32993.1" FT /translation="MGAPDLCTEEDITQLVHQFYAEVRRDAELGPIFNTHVDDWDVHLA FT KLVDFWSSILRGTGRFRGTPMPRHVALPGLHAGLFERWLRLFRATAAAQPNQAMAEQAC FT LMAGRIAQSLWYGYQLHRSPDQAPTDLAHG" FT CDS 218210..218512 FT /transl_table=11 FT /locus_tag="BB2500" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2106" FT /db_xref="GOA:Q7WJJ4" FT /db_xref="InterPro:IPR007843" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ4" FT /protein_id="CAE32994.1" FT /translation="MITPPDHPPRIAIQYCTQCQWLLRAAWMAQELLSTFGADLGEVAL FT VPGTGGVFRIHYNGAPLWDREVDGGFPEAKVLKQRVRDHLDPGRPLGHIDGRPKP" FT CDS complement(218509..219279) FT /transl_table=11 FT /locus_tag="BB2501" FT /product="putative amino-acid ABC transporter, ATP-binding FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1362" FT /db_xref="GOA:Q7WJJ3" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ3" FT /protein_id="CAE32995.1" FT /translation="MIGLQGIDKSFGGNRVLHGVDVVIPEGSVTALIGPSGSGKSTLLR FT CVNLLEIPEAGVLRLGPETLAFDGRRPARDAVQRIRRQTGMVFQNFQLFPHQSVIDNVM FT EGLVTVQRWDKPRARARAMELLEKVGMTAKADAWPVTLSGGQQQRVAIARALAPSPRVL FT LCDEPTSALDPSLAIEVVDVLRRLAGEGMTMLMATHDLRLAASIAQQVVFLEGGAVVEA FT GTPREVFAQSRDARTAAFVSTLTQGLPEEWSAPA" FT misc_feature complement(218629..219201) FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 1.1e-62" FT misc_feature complement(218812..218856) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(219157..219180) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(219276..219956) FT /transl_table=11 FT /locus_tag="BB2502" FT /product="putative amino-acid ABC transporter, permease FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1363" FT /db_xref="GOA:Q7WJJ2" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ2" FT /protein_id="CAE32996.1" FT /translation="MPAWLQLMLDSFWPLLHAGLMFTVPLTLLSFAAGLALAFVVALLR FT LFGPWPIVALMRFYVWLIRGTPLLVQLFVIFYGLPSVGIVLDPLPAALIGFTLNVGAYN FT SEVIRGAIESIPRGQWEAAYSLSMTRGQAMRRTVLPQAARVAVPPLANSFIALVKDTSL FT AAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSALSSLQVRLEKRFGQHAVFA FT EQHR" FT misc_feature complement(219414..219626) FT /note="HMMPfam hit to PF00528, DE Binding-protein-dependent FT transport systems inner membrane component, score 2.3e-17" FT misc_feature complement(join(219720..219788,219825..219893)) FT /note="2 probable transmembrane helices predicted for FT BB2502 by TMHMM2.0 at aa 22-44 and 57-79" FT misc_feature complement(219843..219956) FT /note="Signal peptide predicted for BB2502 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.635) with cleavage site FT probability 0.379 between residues 38 and 39" FT CDS complement(220023..220811) FT /transl_table=11 FT /locus_tag="BB2503" FT /product="putative amino-acid ABC transporter, periplasmic FT amino acid-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1364" FT /db_xref="GOA:Q7WJJ1" FT /db_xref="HSSP:1HSL" FT /db_xref="InterPro:IPR018313" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ1" FT /protein_id="CAE32997.1" FT /translation="MNFSLRKLLLAGLVPLAMVGTAAQADDLAAIKAAGVIKIGTEGTY FT APFSYHDASNKLTGFDVEIGRAIAQKLGVKAEFVEGKWDGLIAGLDVKRYDAVINQVGI FT TDARKAKYDFSDPYISSQAALIVREDNQAIKSFADLKGRKSANTLTSNFGKLAQSYGAE FT VVPVQGFNEAIDLLMSGRVEATVNDNLSFLDFKKQKPNAKVKVAAYDKSKEFSESGVLI FT RKNNPELQAAINKALAELKADGTYRKISEQYFGADLSAAQ" FT misc_feature complement(220044..220703) FT /note="HMMPfam hit to PF00497, DE Bacterial extracellular FT solute-binding proteins, family 3, score 1.9e-82" FT misc_feature complement(220596..220637) FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature." FT misc_feature complement(220737..220811) FT /note="Signal peptide predicted for BB2503 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.981 between residues 25 and 26" FT CDS complement(221086..223422) FT /transl_table=11 FT /locus_tag="BB2504" FT /product="putative membrane transport ATPase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2722" FT /db_xref="GOA:Q7WJJ0" FT /db_xref="InterPro:IPR008250" FT /db_xref="UniProtKB/TrEMBL:Q7WJJ0" FT /protein_id="CAE32998.1" FT /translation="MPSTTRDLALDTPSGQRTDAHGHDHAGHDHAGHDHAGHDHAHDHG FT IPACCGHGHGQPAAPAAAPAWQPGPGQQVTRVRIGQMDCPTEETLIRKKLASLPEVHEL FT DFNLMQRVLTVLHADGALDRIDAAIRSLGMTPEPLAGDAPATPAGAAAPSRGWRLLAAG FT GVLAALSELAHFTGQPVYVAAALALAAILACGLSTYRKGWIAVRNGNLNINALMSIAVT FT GAMLIGQWPEAAMVMFLFNVAELIEARALDRARHAVRGLLDLAPQTATARQPDGSWAEV FT PAARLRPGDLVRVRPGERIAADGTISEGQSAIDQSPITGESLPVEKGPDDDVYAGTVNA FT SGSFDYRVTAAAGNTTLDRIIHAVEQAQGARAPTQRFIDRFSRIYTPAVVGLAVLVALA FT PPLLLGHAWLDSVYRALALLIIACPCALVISTPVSVVSGLTAAARRGILIKGGVYLEEG FT RKLRWLALDKTGTLTQGKPVQTDLELLHDASAGGRPALRAAVSLAARSDHPVSRALAQA FT DHALDAPLDEVNGFAALPGRGVQGEIGGERFQLGNRRLMRELDVSTPDIEARIDAYEAA FT GKTAIALADGQRVLLLAAVADTLKASSAAAVADLHRLGVRTLMLTGDNTRAAQAVAAQA FT GIDEARGDLLPQDKLDAVEAKLDPALRVGMVGDGINDAPALARADIGFAMGAAGTGTAI FT ETADVALMDDDLRKIGTFVRLSRATHRILTQNIVLALGIKAVFLVLAMAGQATLWMAVF FT ADVGASLLVVANGLRLLRAGRHQAS" FT misc_feature complement(join(221113..221181,221191..221259, FT 222103..222171,222214..222282,222832..222900)) FT /note="5 probable transmembrane helices predicted for FT BB2504 by TMHMM2.0 at aa 175-197, 381-403, 418-440, 722-744 FT and 748-770" FT misc_feature complement(221356..222042) FT /note="HMMPfam hit to PF00702, DE haloacid FT dehalogenase-like hydrolase, score 1e-26" FT misc_feature complement(221359..221427) FT /note="PS01229 Hypothetical cof family signature 2." FT misc_feature complement(221686..221709) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(222004..222024) FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT misc_feature complement(222052..222720) FT /note="HMMPfam hit to PF00122, DE E1-E2 ATPase, score FT 5.6e-97" FT CDS 223505..223939 FT /transl_table=11 FT /locus_tag="BB2505" FT /product="putative MerR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2723" FT /db_xref="GOA:Q7WJI9" FT /db_xref="HSSP:1Q06" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:Q7WJI9" FT /protein_id="CAE32999.1" FT /translation="MKIGELARTAGTTVETVRYYEKEGLLPAPERGLNNYRSYGEAHVE FT RLRLIRNCRALDMTQDEIRTVLALADNHEAGCAPINQVFDEHIAHVDARIAELTQLKAQ FT LGELRQRCASARPDAEDCGILHGLSEMQVEERPERHTHLG" FT misc_feature 223505..223570 FT /note="Predicted helix-turn-helix motif with score FT 1885.000, SD 5.61 at aa 1-22, sequence FT MKIGELARTAGTTVETVRYYEK" FT misc_feature 223514..223621 FT /note="HMMPfam hit to PF00376, DE Bacterial regulatory FT proteins, merR family, score 1.8e-11" FT CDS 224042..224626 FT /transl_table=11 FT /locus_tag="BB2506" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2703" FT /db_xref="GOA:Q7WJI8" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:Q7WJI8" FT /protein_id="CAE33000.1" FT /translation="MTVSPLHALTSRRSMKFLRAPAPKQDELEQILQAAMSAPDHGALR FT PWRFVLIRGEAIGRLADLAIEAVKRSGDKRMTPEKEKSVREWAAGVPLFIAVAQKISHD FT NTRIPEQEQLLATGAAVMNILNAAHMLGYGAFWSTGLGTYVEDVQDALGLDAMDYRFLG FT FVALGTPGCAVPPAQRPDFREFVSEWQGVTA" FT misc_feature 224051..224500 FT /note="HMMPfam hit to PF00881, DE Nitroreductase family, FT score 3.7e-14" FT CDS complement(224696..226117) FT /transl_table=11 FT /gene="argH" FT /locus_tag="BB2507" FT /product="argininosuccinate lyase" FT /EC_number="4.3.2.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP2702" FT /db_xref="GOA:Q7WJI7" FT /db_xref="InterPro:IPR000362" FT /db_xref="UniProtKB/Swiss-Prot:Q7WJI7" FT /protein_id="CAE33001.1" FT /translation="MANTSHSSQDQFANKAQAWSARFSEPVSDLVKRYTASVDFDKRMA FT RHDIRGSLAHADMLAAQGIISAQDLADIQRGMQQILSEIDAGSFQWLLDLEDVHLNIEK FT RLVELVGDAGKRLHTGRSRNDQVATDIRLWLRDEIDTLVDLLRQLRHALATVALENAAT FT IMPGFTHLQVAQPVTFGHHLLAYAEMFGRDAERLADCRRRVNRLPLGAAALAGTSYPID FT RERVARTLGFDGVCRNSLDAVSDRDFGIEFCAAGALIMTHISRLSEELVLWMSPRVGFI FT DLADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLVALLTLMKGQPLAYNKDNQEDKE FT GLFDTADTLRDTLTIFADMAGGIKVKADNMRAAALQGFATATDLADYLVKRGLPFRDAH FT EIVAHAVRDCEQRGCDLADLSLADLQAYHPSIGEDIHQVLTLEGSVAARKHIGGTAPER FT VREEAQRVLAETAGA" FT misc_feature complement(224780..226057) FT /note="HMMPfam hit to PF00206, DE Lyase, score 5.1e-112" FT misc_feature complement(225221..225250) FT /note="PS00163 Fumarate lyases signature." FT CDS 226225..227571 FT /transl_table=11 FT /locus_tag="BB2508" FT /product="putative membrane transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2701" FT /db_xref="GOA:Q7WJI6" FT /db_xref="InterPro:IPR006685" FT /db_xref="UniProtKB/TrEMBL:Q7WJI6" FT /protein_id="CAE33002.1" FT /translation="MLPKELENVVATLDNYVPDTAWGQTLVGIGVLVLTALFVQWVVAR FT VVLYFAHRLLVLSGREDWDRALSRRRAYQNFWYAVPFAVVSMGIELVPHAERAVTVVGR FT LSHAGAWICVFVAFSGVLSAWQDTYSATTRAQTRSIKGYIQIGKLILCAVGAVLVLSIL FT LDRSPLWMISGLGALSAVLLLVFKDTLLSLVASTQLTSNDMLRIGDWIEMPQANADGFV FT KDIALHTVKVQNWDNTVTTVPTYKLFSESYRNYRHMFESGGRRIKRTLRLDAASVRFMN FT EEEGGRLKRFVLLRDYLQAKEDALLEANRQLGELAEVPANRRRLTNIGTFRGYALAYLR FT QHPEVRQDMAMMVRMMEPQPNGIPIEIYCFTAITAWVEYERIQGDIFDHLLAILPELGL FT RLFQEPSGSDLGNLAGGMREAALHEFRREQVAAGEAPLALRGDGAAPVR" FT misc_feature join(226282..226350,226450..226503,226546..226599, FT 226648..226716,226729..226782) FT /note="5 probable transmembrane helices predicted for FT BB2508 by TMHMM2.0 at aa 20-42, 76-93, 108-125, 142-164 and FT 169-186" FT misc_feature 226657..227430 FT /note="HMMPfam hit to PF00924, DE Mechanosensitive ion FT channel, score 4.6e-25" FT CDS 227610..229244 FT /transl_table=11 FT /locus_tag="BB2509" FT /product="putative NAD synthetase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2700" FT /db_xref="GOA:Q7WJI5" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:Q7WJI5" FT /protein_id="CAE33003.1" FT /translation="MSLARVGIAQINACVGDLAGNAARVLQAARQAAGQGADVLVTPEL FT VLTGYPPEDLLLRPRFIQEQQAVFERLCQDLAGLAGLHVVIGHVLARQDRLYNAATVVC FT EGRVLGSYCKRELPNYSVFDEQRYFSAHGEAFGFTVKGVRFGLNICEDIWFERAPRAAA FT ADGAQVLLVPNASPYNTGKQEERLSVARRSVQDTGCALIYANLVGGQDELVFDGASFAL FT DAQGRMSARLPDFTEGVNVLEVDARGTVRPVTEQAAVQPYGLEEQVWNALVLGVRDYLG FT KNGFPGAIIGLSGGIDSAVVLAVAVDAVGADNVRAVMMPSRYTADISLTDAADMARRLG FT VQYDVIAIGEVVDRFEAALAPQFAGLPVDATEENIQARARGTLLMALSNKTGRLVLTTG FT NKSEMTTGYCTLYGDMAGGFAVIKDVPKTLVYRLANWRNRRQPIIPERIITRPPSAELR FT PDQTDQDSLPPYDILDGIIERYMEHNASAADIVAAGFPREAVGQVVRLIRINEYKRRQA FT PPGPRITPRAFGRDWRYPVTNGFRETV" FT misc_feature 227616..228395 FT /note="HMMPfam hit to PF00795, DE Carbon-nitrogen FT hydrolase, score 4.7e-12" FT misc_feature 228564..229175 FT /note="HMMPfam hit to PF02540, DE NAD synthase, score FT 3.3e-77" FT CDS 229288..229626 FT /transl_table=11 FT /gene="glnB" FT /locus_tag="BB2510" FT /product="nitrogen regulatory protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2699" FT /db_xref="GOA:Q7WJI4" FT /db_xref="HSSP:1HWU" FT /db_xref="InterPro:IPR015867" FT /db_xref="UniProtKB/TrEMBL:Q7WJI4" FT /protein_id="CAE33004.1" FT /translation="MKQVTAIIKPFKLDEVREALAEVGVSGLTVTEVKGFGRQKGHTEL FT YRGAEYVVDFLPKIRVEVVLADDMVDPAIEAIVKAARTGKIGDGKIFVTPVEQAIRIRT FT GESDEEAL" FT misc_feature 229288..229620 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00543, DE Nitrogen regulatory FT protein P-II, score 6.7e-61" FT misc_feature 229423..229440 FT /note="PS00496 P-II protein urydylation site." FT misc_feature 229534..229575 FT /note="PS00638 P-II protein C-terminal region signature." FT CDS complement(229651..230025) FT /transl_table=11 FT /locus_tag="BB2511" FT /product="endonuclease" FT /note="ortholog of Bordetella pertussis (BX470248) BP2698" FT /db_xref="GOA:Q7WJI3" FT /db_xref="HSSP:1ENJ" FT /db_xref="InterPro:IPR004260" FT /db_xref="UniProtKB/TrEMBL:Q7WJI3" FT /protein_id="CAE33005.1" FT /translation="MTRINCVPVEELSGPHLVAEYRELPRVFALAHKAAARGALVQPAA FT YTLGKGHLLFFYTRLGYLARRHRALVEEMRRRGYRPAFAGVTREDFPDIPAPFWNDWTP FT TEEALALNRARIAARSGGKA" FT misc_feature complement(229657..230025) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03013, DE Pyrimidine dimer DNA FT glycosylase, score 8.5e-24" FT CDS 230111..230491 FT /transl_table=11 FT /locus_tag="BB2512" FT /product="putative heat shock protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2697" FT /db_xref="GOA:Q7WJI2" FT /db_xref="HSSP:1DM9" FT /db_xref="InterPro:IPR002942" FT /db_xref="UniProtKB/TrEMBL:Q7WJI2" FT /protein_id="CAE33006.1" FT /translation="MDKIRLDKWLWAARFYKTRSLAVQEIGKGRVQVNGQPAKPAREVA FT PGDVVCIRKEDPPIHVRVCAVSGVRGPAPVAQQLYEETPESAAARERAAEMRRLAPEPA FT MDIVAGRPTKRDRRLIDKWRDA" FT misc_feature 230120..230260 FT /note="HMMPfam hit to PF01479, DE S4 domain, score 8e-13" FT CDS 230608..232545 FT /transl_table=11 FT /locus_tag="BB2513" FT /product="putative phosphatase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2696" FT /db_xref="InterPro:IPR008557" FT /db_xref="UniProtKB/TrEMBL:Q7WJI1" FT /protein_id="CAE33007.1" FT /translation="MHEPTMSKRRLVLKMLGGAPMLPLGAVGAATLLAGCRAGADGAQA FT AARGAGPRGDFAAAAFTSMAAPSLDAPEKMAVTTVESTLEVRFSDGGRQTFQLGYEPFF FT MTGDSVPDGQGATLVAGGYLDIQGRPIMDSSVPGKARQFFSDCPDGMSLLALPSARVPG FT VKGNTVFAVVQFEYASHNQKGESMYGLLPSPIAVLTLAQDPATGRLALVKYSPVDTAPA FT HGLWITCGASLSPWNTHLASEEYEPDATTARASAQFQGFSRNLYGDAAKANPYHYGHLP FT EVVVHPDGTGTIRKHYCLGRISHELIQVMPDQRTCLMGDDATNGGLFMFVADRKADLSA FT GTLYVAKWRQTSGEGPGAGTLGWINLGHARSADIEALADTLTAADIMDVRTADPGDPAF FT KAIRVNGKANWVRLAPGREQAAAFLETHRYAALAGGTMAFSKMEGTTVNARDRIAYSAM FT SRIETSMVDGTSPDLRVQGPEPGAVYALNLRGGQRDSAGTAIDSEWVPVDMAAVPALVG FT EKLAAPDALGNRHHADRISNPDNIKFSEKLRTLFIGEDSNGHVNNFLWAYNVDSGALSR FT ILSCPAGGESTGLQAVDEINGWTYITSNFQHAADWGGVHAVVRATLDPLVKASYRDGFG FT ASVGYITIKP" FT misc_feature 230608..230694 FT /note="Signal peptide predicted for BB2513 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.972) with cleavage site FT probability 0.408 between residues 29 and 30" FT misc_feature 230683..230715 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(232695..233240) FT /transl_table=11 FT /locus_tag="BB2514" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2695" FT /db_xref="UniProtKB/TrEMBL:Q7WJI0" FT /protein_id="CAE33008.1" FT /translation="MLPIVIVSGPPGSGKTTACGLLAQADPQGLHLPSDLFYGFPAHPI FT PPYRPQADAQNAAVIRAVCRSAASFAADGYRVYLDGIFGPWFLPLIAAQLQAARCPAAY FT ALLDIGLDEALARVEQRSGPGQASMVRTMHDAFRAAGSLAGHRVVTAGRPAAEIADEIA FT GRLQAGALALDLARWAPG" FT misc_feature complement(233193..233216) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(233313..234194) FT /transl_table=11 FT /locus_tag="BB2515" FT /product="LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2694" FT /db_xref="GOA:Q7WJH9" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJH9" FT /protein_id="CAE33009.1" FT /translation="MSSIRFLRTFLAVAQHGTFSEAAEQVALTQAAVSFQMRALEAELG FT RELFDRGGRLAILNAAGRELVPEIKRLLDLYDHLKAPRNVPGELAGSVSVGAIVSCMGT FT LSKVVSQLKRDHPALDVRVFSGKASELAGKVEAGELDAALVVEAGRKMASTRWTPLYEE FT PLVVLAHPHAPGADAREVLAANPFLRFDRTQRTGRQIDRIVRRLGGGLNEFLELNAIET FT LVELVRQEVGVTLLPLLNGANWQASPQLRVLPLPAELGPAVRAIGMIERRDHARLAVTA FT EICAQCGALFGR" FT misc_feature complement(233319..233939) FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 8.5e-29" FT misc_feature complement(234006..234185) FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 5.8e-20" FT misc_feature complement(234051..234143) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature complement(234081..234146) FT /note="Predicted helix-turn-helix motif with score FT 1314.000, SD 3.66 at aa 17-38, sequence FT GTFSEAAEQVALTQAAVSFQMR" FT misc_feature complement(234129..234194) FT /note="Signal peptide predicted for BB2515 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.716) with cleavage site FT probability 0.571 between residues 22 and 23" FT CDS 234302..235930 FT /transl_table=11 FT /locus_tag="BB2516" FT /product="putative gamma-glutamyltranspeptidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2693" FT /db_xref="GOA:Q7WJH8" FT /db_xref="InterPro:IPR019775" FT /db_xref="UniProtKB/TrEMBL:Q7WJH8" FT /protein_id="CAE33010.1" FT /translation="MKAFNWVNPYPSTRIPVFARNVVSTSHPLAAQAGLRMLLKGGNAV FT DAAIAAAATIVLVEPVSCGLGGDCFAIVWDGRQLHGLNSSGVAPAAWNVEYFKRKYGTG FT PDGLAVQPKRGWDAVTVPGVVAGWAALHEKLGKLPFEQLFEPAIEIAERGYTVPPVVAH FT KWAAAAAELSEQPGYAQAFMPEGRAPRVGEHFRFPDAAYALRRIAASGGRDFYEGELAE FT RIAAFSKECGGAMTLDDLRNYRPEWVKPISRSYRGYELHEIPPNGQGIAALIALGICER FT FDLADMPVDSVQSQHLQIEAMKLAFSDLYRYVADPRSMEVTPQQMLDDAYLDSRARLID FT PDRATHFEAGRPHAGGTIYLTAADENGMMISFIQSNYMGFGSGVVVPGTGISLQNRGVG FT FSMNPASANVVEGGKRPFHTIIPGFLTRGGKPVMSFGVMGGDMQPQGHLQTVIRMLDYH FT QQPQAACCAPRWKVNRDFTLDIESTMNRATVEGLKNLGHRLKAVDDPYMDFGAGQFIWR FT MAESDNDLGYVAASDSRRDGQAVGF" FT misc_feature 234404..235915 FT /note="HMMPfam hit to PF01019, DE FT Gamma-glutamyltranspeptidase, score 8e-171" FT misc_feature 234485..234529 FT /note="PS00678 Trp-Asp (WD) repeats signature." FT CDS 235972..237489 FT /transl_table=11 FT /locus_tag="BB2517" FT /product="ABC-transport protein, solute-binding component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2692" FT /db_xref="GOA:Q7WJH7" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q7WJH7" FT /protein_id="CAE33011.1" FT /translation="MTKTKSLSMMMGAAVLAGAGGAALAQDLRIGLQEDPDVLDPHRAR FT TYVGRIVFTSLCDKLVDIDEKLQFVPQLAQSWSFSEDNKTLTFKLRTDVQFHDGSKFDA FT AAARANLERAMTLQDSMRKGELASVEKIEAPDPATLVLTLKRPDATLLAQLSDRAGMML FT SPKAFEGDAAAVGRKPVCSGPYKFVERVQNDRIVLQKFDQYYGAKDYHFDKLVFLPIPD FT TTVRLSNLRAGGLDILERMNPSDAPQVKNDASVQFMPVSGLGYQEVFFNTGNGKRAETN FT PFKDKRVRQALALSIDRAIINEVVGGGIFDPASQPFPPASPYHSDKFPVPKRDVERARA FT LLKQAGLQKVKAEFAFGNNTTTSAIAEMIQAMAAEAGFELSLRPTEYAAMLNEAQAGNF FT EMIMRGWSGRVDPDGNIYQFVTCKGALNDGRYCNAEVDKLLAEARTVPDQAKRKVIYDQ FT AQALLQADTHDIYLYYQPWPFVLGKNVRGFKPYPDGMVRLKGVTLAK" FT misc_feature 235972..236046 FT /note="Signal peptide predicted for BB2517 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.995 between residues 25 and 26" FT misc_feature 235972..237480 FT /note="HMMPfam hit to PF00496, DE Bacterial extracellular FT solute-binding proteins, family 5, score 2.1e-60" FT CDS 237584..238528 FT /transl_table=11 FT /locus_tag="BB2518" FT /product="ABC-transport protein, inner membrane component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2691" FT /db_xref="GOA:Q7WJH6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7WJH6" FT /protein_id="CAE33012.1" FT /translation="MFKLILRRVVVAIPTLILVSMIVFMLQKILPGDPVLTLAGEERDP FT AVLDYLREKYRLNDPLPVQYGAWVAQVLQGDLGKSMRTDVPVLTLIAQKLPVTLQLAVM FT AMAFALLVGIPLGIVAAVRKGTAVEMGANMAALSGMSIPNFWLGIILIMVVSVQWKLLP FT ASGYVSPAEDFWLSIKTMLMPALVLSTAIAAYLMRHTRSAMLEALSADYVRTARAKGVA FT PRKVVLRHALRNALMPIVTLVTLLFGELLAGAVLTEQVFTIPGFGKLIVDAVFNRDYAV FT VQGVVLCVAVGFIVMNLLADILYILVNPRLRHA" FT misc_feature 237584..237658 FT /note="Signal peptide predicted for BB2518 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.821) with cleavage site FT probability 0.559 between residues 25 and 26" FT misc_feature join(237596..237664,237881..237949,238007..238060, FT 238103..238171,238283..238351,238436..238504) FT /note="6 probable transmembrane helices predicted for FT BB2518 by TMHMM2.0 at aa 5-27, 100-122, 142-159, 174-196, FT 234-256 and 285-307" FT misc_feature 238193..238408 FT /note="HMMPfam hit to PF00528, DE Binding-protein-dependent FT transport systems inner membrane component, score 3.8e-07" FT misc_feature 238196..238282 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 238525..239400 FT /transl_table=11 FT /locus_tag="BB2519" FT /product="probable ABC-transport protein, inner membrane FT component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2690" FT /db_xref="GOA:Q7WJH5" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7WJH5" FT /protein_id="CAE33013.1" FT /translation="MSAPIASAGMAAPRRANRSWGKFRRNRIAMLGALIVLAFVVLALL FT APWVASHDPFQTSFMTIRKAPSAAFWMGTDELGRDIFSRMVYGARASLMAGMVSVLIAL FT AVGVPFGLAAGYFGGWTDSVISRATEALLAIPFLILAIALAAFLGPSLTNAMIAIGVSA FT APKFIRLTRGQVLAVKNEDYVQSARALGASDLRIIGRHVFPNVMPPLIVQATITIATAI FT IAEASLSFLGLGLQPPNPSWGSMLNTAKNFMTQAPWMSIFPGSAIFLVVLGFNLLGDGL FT RDALDPRQEK" FT misc_feature 238525..238653 FT /note="Signal peptide predicted for BB2519 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.988) with cleavage site FT probability 0.824 between residues 43 and 44" FT misc_feature join(238606..238674,238810..238878,238915..238983, FT 239161..239229,239290..239358) FT /note="5 probable transmembrane helices predicted for FT BB2519 by TMHMM2.0 at aa 28-50, 96-118, 131-153, 213-235 FT and 256-278" FT misc_feature 238765..238851 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT misc_feature 239047..239277 FT /note="HMMPfam hit to PF00528, DE Binding-protein-dependent FT transport systems inner membrane component, score 1.3e-10" FT misc_feature 239050..239136 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 239403..241262 FT /transl_table=11 FT /locus_tag="BB2520" FT /product="probable ATP-binding ABC transporter protein" FT /db_xref="GOA:Q7WJH4" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7WJH4" FT /protein_id="CAE33014.1" FT /translation="MDANRVVQVDGLSVRFNTPGRVVQAVNDVSFHVDRGETLAIVGES FT GSGKSVTSLALMRLVEYGGGRLSATDMRLRRRGGDVLDLARADERTLQRVRGADVAMIF FT QEPMTSLNPSFTAGNQIAEALQLHQGLDAAGARAEALRMLERVRIPEARAILDRYPHQL FT SGGMRQRVMIAMALSCKPQLLIADEPTTALDVTIQAQILQLIRQLQEEMDMGVIFITHD FT MGVVAEVADRVLVMYRGDKVEEGGCDGVFAAPRHAYTRALLSAVPRLGAMQGTDQPAPF FT PLLQVDQQALAPAPQAGAAEVDTVRRDGGPVLKVRGLVTRFDIAGGIFGRIDKRVHAVE FT QVSFELFPGETLALVGESGCGKTTTGRSLLQLVKSQGGSIEFDGRDIGVLRGAAMQSLR FT RHIQFIFQDPFASLNPRMTVGDSIMEPLLVHRTASGRAARERVRWLMDKCGLLPEMTDR FT YPHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIQAQIVNLLLDLQRELGVSYL FT FISHDMAVVERVSHRVAVMYLGQIVEIGPRRAIFENPQHPYTRKLMAAVPIADPRRRHR FT ERSLLVDEIPSPVRKVGDEPVVAPLVRVGEGHYVARHPVGVYA" FT misc_feature 239508..240119 FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 1.4e-57" FT misc_feature 239529..239552 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 239889..239933 FT /note="PS00211 ABC transporters family signature." FT misc_feature 240447..241019 FT /note="HMMPfam hit to PF00005, DE ABC transporter, score FT 2.4e-58" FT misc_feature 240468..240491 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 240789..240833 FT /note="PS00211 ABC transporters family signature." FT CDS complement(241265..241909) FT /transl_table=11 FT /locus_tag="BB2521" FT /product="LysE-family efflux protein" FT /db_xref="GOA:Q7WJH3" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/TrEMBL:Q7WJH3" FT /protein_id="CAE33015.1" FT /translation="MTPLAALLAFTVAATLLTITPGLDTALVLRTAAIDGPRRALLAGL FT GVCAGCLAWGVAAALGLGALLAASSLAYDALRIAGAIYLCWLGARLLARSLRRRAGDAA FT PGMLPAAPAGGGALQWFWRGCLTNMLNPKVGVFYVTFLPQFIPAGVDVLAFSLLLAALH FT AALGLLWFAALVAATRPLSRWLARPSVARGLDRLSAGVFIAFGLKLALERR" FT misc_feature complement(241355..241702) FT /note="HMMPfam hit to PF01810, DE LysE type translocator, FT score 4.7e-05" FT misc_feature complement(join(241388..241456,241484..241552, FT 241634..241687,241724..241792,241829..241897)) FT /note="5 probable transmembrane helices predicted for FT BB2521 by TMHMM2.0 at aa 5-27, 40-62, 75-92, 120-142 and FT 152-174" FT misc_feature complement(241832..241909) FT /note="Signal peptide predicted for BB2521 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.955) with cleavage site FT probability 0.451 between residues 26 and 27" FT CDS 242001..242537 FT /transl_table=11 FT /locus_tag="BB2522" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009822" FT /db_xref="UniProtKB/TrEMBL:Q7WJH2" FT /protein_id="CAE33016.1" FT /translation="MALRATIYKADLHVADTDRHYYASHGLTIARHPSETDERMMVRVL FT AYALHADEQLAFTKGLSDTDEPDLWRKDLTGDIELWVEVGQPDERRILKACGRAAEVVV FT YCYGGHASQVWWDGVRGKLERARNLRVVCLPAAQTEALAQLARRTMQVHVNISDGAAFV FT STDEGQVQVEPQSWR" FT CDS complement(242671..243861) FT /transl_table=11 FT /locus_tag="BB2523" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0980" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7WJH1" FT /protein_id="CAE33017.1" FT /translation="MPMTTTAESPNIRRNTRLLSCAQALGGASPAIVISMGGLVGQMLA FT GDPGLATLPVSLYNLGLAAGILPAAAMMRRRGRRGGYQLGALLGLLGGLLAAWGIWSGR FT FALFCTGTALAGLYGAYVQSYRHAVTDGVRPEHRPRAISAIMSAGLVAAVLGTNAAIWT FT RNLWPAAPFAGSFVSQAALALLALGVVSRLRAVPVGLAAAQAGRPLARIARTPRFIIAA FT AAGVVSFGLMSLVMTAAPLAMVDCGHSVAAAALGIQWHVLAMYAPSFVTGRLIERFGKL FT PVTALGLALMLAAAGVSLTGLSVPHFWAVLVLLGVGWNLGFIGATAMLADCCEPHERLR FT VQALNDLLVFGCVAAASFSSGQLLAHGGWSIVNLTVFPAAAAVLLLLAWQERKARG" FT misc_feature complement(join(242695..242763,242773..242841, FT 242875..242943,242953..243021,243046..243114, FT 243142..243210,243292..243360,243373..243441, FT 243496..243549,243559..243612,243646..243714, FT 243742..243801)) FT /note="12 probable transmembrane helices predicted for FT BB2523 by TMHMM2.0 at aa 21-40, 50-72, 84-101, 105-122, FT 141-163, 168-190, 218-240, 250-272, 281-303, 307-329, FT 341-363 and 367-389" FT CDS complement(243928..244500) FT /transl_table=11 FT /locus_tag="BB2524" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0981" FT /db_xref="GOA:Q7WJH0" FT /db_xref="InterPro:IPR007440" FT /db_xref="UniProtKB/Swiss-Prot:Q7WJH0" FT /protein_id="CAE33018.1" FT /translation="MTTPIPLARGWLPAAPSTLDPLRKYWLFRPGALTAGLRQLGHVRL FT RVLAEYPTGAPRDEADGMRIAAQSPVWVREVLMSIDGVDSVVARSLTPLRASHGVWQGM FT RRLLTRPLADMLYHDPGIHRSVFVCRRLAAGVPFHATAIARAPAGGPEPALWARRSAFW FT RAGQPLLVAECFLPAFWSLARAPVAPR" FT CDS 244560..245291 FT /transl_table=11 FT /locus_tag="BB2525" FT /product="putative RNA pseudouridylate synthase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0982" FT /db_xref="GOA:Q7WJG9" FT /db_xref="HSSP:1VIO" FT /db_xref="InterPro:IPR006145" FT /db_xref="UniProtKB/TrEMBL:Q7WJG9" FT /protein_id="CAE33019.1" FT /translation="MEKVRISKLMSERGLCSRREADSYIERGWVRVDGVVVSELGARAF FT PDQAITLERAAAARQTARVTILLHKPVGYVSGQAEKGYTPAVALIDARSRYAGDRAPLR FT FERGQLQGLAVAGRLDIDSQGLLVLTQDGRIAKKLIGEDSEVDKEYLVRVQGRLSEAGL FT ALLNHGLSLDGKPLRPAQVRWQNADQLRFVLREGKKRQIRRMCELVGLRVVGLKRVRIG FT RVSLGDLPVGQWRYLRADERF" FT misc_feature 244569..244709 FT /note="HMMPfam hit to PF01479, DE S4 domain, score 0.00021" FT misc_feature 244749..245183 FT /note="HMMPfam hit to PF00849, DE RNA pseudouridylate FT synthase, score 6.5e-08" FT CDS complement(245343..246260) FT /transl_table=11 FT /locus_tag="BB2526" FT /product="LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0983" FT /db_xref="GOA:Q7WJG8" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7WJG8" FT /protein_id="CAE33020.1" FT /translation="MELFVEVARTLSFSRAAENLAIPKSTLSRQVAELERSVGLRLLSR FT TTRRVELTEAGQLYFERCQRIVAEARIAHEELQNLVETPSGPLRVNMPADFGTDFLSEA FT FTEFSRRYPEVTFYLDLASPEHAERVFQTCDVSIEIGDLPDSTHIARLLGVLPAHLYAS FT PDYLARHGEPQHPDDLPRHECIQFRAGTGRVTRWPLNSGERHVEITPGNRFSVNSVSMV FT RNLATLGAGIAILAPMGNVREDIESGRLKRILPDWLAGPFPVYAVTDTRMLPAKTRIFV FT EFLMERLSNKTLAGQNNPAFLNLR" FT misc_feature complement(245394..246020) FT /note="HMMPfam hit to PF03466, DE LysR substrate binding FT domain, score 4.7e-39" FT misc_feature complement(246090..246260) FT /note="HMMPfam hit to PF00126, DE Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1.3e-18" FT misc_feature complement(246135..246227) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature complement(246165..246230) FT /note="Predicted helix-turn-helix motif with score FT 1328.000, SD 3.71 at aa 11-32, sequence FT LSFSRAAENLAIPKSTLSRQVA" FT misc_feature complement(246195..246242) FT /note="PS00063 Aldo/keto reductase family putative active FT site signature." FT CDS 246511..247701 FT /transl_table=11 FT /gene="acrA" FT /gene_synonym="mtcA" FT /gene_synonym="lir" FT /locus_tag="BB2527" FT /product="acriflavine resistance protein a precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP0984" FT /db_xref="GOA:Q7WJG7" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q7WJG7" FT /protein_id="CAE33021.1" FT /translation="MKNNYLVGRGIAALSLAALTLTLAACGKEQQAAQQGGQPQVGVVT FT LKTQSVALSSELPGRTAAYRIAEVRPQVSGIVQKRLFTEGGEVAAGQQLYQIDPALYQA FT EVDSRRAALARVQAQLKTATLLVQRYKPLVDTRAVSRQAYDDAVAARDQASADVLAAKA FT ALDTARINLVYTKVLAPIGGIIGRSNVTEGALVTANQSAAVAAVQQIDPIYVDVTQSSV FT QLLRLKSALDSGLLQREAGEQSARVTLTLEDGTQYDQDGKLQFSEVTVDPGTGSVLLRA FT VFPNPQRKLLPGMFVRARLAEGVASEGLLVPQRGVTRNQRGLPTALVVNAENKVELRTL FT KTDRAIGDQWLVSSGLAAGDRVIVEGLQSVRPGAEVKAAEWSPPASKAAAQPAAAK" FT misc_feature 246511..246591 FT /note="Signal peptide predicted for BB2527 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.682 between residues 27 and 28" FT misc_feature 246556..246588 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 246703..247602 FT /note="HMMPfam hit to PF00529, DE HlyD family secretion FT protein, score 8.5e-69" FT CDS 247714..250893 FT /transl_table=11 FT /gene="acrB" FT /gene_synonym="acrE" FT /locus_tag="BB2528" FT /product="acriflavine resistance protein B" FT /note="ortholog of Bordetella pertussis (BX470248) BP0985" FT /db_xref="GOA:Q7WJG6" FT /db_xref="HSSP:1IWG" FT /db_xref="InterPro:IPR004764" FT /db_xref="UniProtKB/TrEMBL:Q7WJG6" FT /protein_id="CAE33022.1" FT /translation="MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPNIAPPAISI FT NVTYPGASAQTVQDTVVQVIEQQMNGIDNLQYISSESNSDGSMSITLTFSQGTNPDTAQ FT VQVQNKLAVAQPLLPLEVQQQGIRVTKATKNFLIVAGFVSTDGTMDKSDLADYVASYIQ FT DPISRTPGVGDFQLFGAPYAMRIWISPEKLVNFGLTASDVTTAIREQNVQVSSGQLGGQ FT PAVRGQQLNATVIGPSRLQTPEAFGRILLKVNSDGSQVRLKDVASIELGAQTYAIDSYY FT NGKPASGLAIKLASGANALDTAQAVRETINGLKPYFPPGMDVVYPYDTTPFVSLSIEGV FT VKTLFEAVLLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMV FT LAIGLLVDDAIVVVENVERVMAEEGLSPRQATRKSMSQITGALIGIAMVLAAVFVPMAF FT FGGSTGVIYRQFSITIVSSMVLSVVVAIVFTPALCATMLKPIPKGHHGSKKGFFGWFNR FT TFERSSQAYANNVARSMGRTKRLLLIYVVILLGMAWMFMRIPTAFLPDEDQGILFAQVQ FT APAGATSERTQATIDAAVKYLLEDEKESVASVFAVNGFSFGGRGQNAAILFIKLRDWNE FT RKGAEHRAAAVAARANAKFRAELRDAQAAVFAPPAVMELGNATGFDFQLQDRAGVGHEK FT LLAARNQLLQEAGTSPMLVAVRPNGIEDAPQYQLDIDREKARALGVSITEINNTLATAW FT GSSYVNDFIDRGRVKKVFVQGEASSRMLPQDLDKWYVRNNAGDMVPFSAFSSAQWTFGP FT QKLNRYNGVPSYNIQGQAAPGYSSGDAMAEMERLADKLPLGIGYDWTGLSFEERLSGAQ FT APALYAISLIVVFLCLAALYESWSIPTAVMLVVPLGVVGALLATLTRGLSNDVYFQVGL FT LTTIGLAAKNAILIVEFAKEHYEEGASLTEAAVHAARQRLRPILMTSLAFILGVVPLAI FT STGAGSGSQNAIGTGVIGGMLTGTFLAIFFVPLFFVLTLRLFKVKRASENREDDDPHGG FT AQPATHGGQPQ" FT misc_feature 247714..247815 FT /note="Signal peptide predicted for BB2528 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.961) with cleavage site FT probability 0.721 between residues 34 and 35" FT misc_feature 247714..250797 FT /note="HMMPfam hit to PF00873, DE AcrB/AcrD/AcrF family, FT score 0" FT misc_feature join(247750..247818,248722..248790,248809..248877, FT 248887..248955,249025..249093,249121..249189, FT 249331..249399,250318..250386,250405..250473, FT 250486..250554,250627..250695,250723..250791) FT /note="12 probable transmembrane helices predicted for FT BB2528 by TMHMM2.0 at aa 13-35, 337-359, 366-388, 392-414, FT 438-460, 470-492, 540-562, 869-891, 898-920, 925-947, FT 972-994 and 1004-1026" FT CDS 250890..252356 FT /transl_table=11 FT /gene="cusC" FT /gene_synonym="ibeB" FT /locus_tag="BB2529" FT /product="probable outer membrane lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0986" FT /db_xref="GOA:Q7WJG5" FT /db_xref="InterPro:IPR010131" FT /db_xref="UniProtKB/TrEMBL:Q7WJG5" FT /protein_id="CAE33023.1" FT /translation="MKPAVMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYG FT APGQAAAGAPAAADVGWRDFFGDPLLQELLALSLANNRDLRVAALNVEAARAQYRIQRA FT DLAPSVGVGGTGSVQRTPADLNPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQ FT LYLAQDETRLATQLTLVAETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGV FT ATELDLSQAEISLRTAERNLSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDG FT VVLADLPAGLPSDLLARRPDIRAAEHQLQAANASIGAARAAFFPRISLTGSAGTASASL FT GGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDA FT LAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVET FT RLARLSNLIQLYKALGGGWSERTVAAAQAS" FT misc_feature 250890..250961 FT /note="Signal peptide predicted for BB2529 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.995) with cleavage site FT probability 0.604 between residues 24 and 25" FT misc_feature 250920..250952 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 251100..251705 FT /note="HMMPfam hit to PF02321, DE Outer membrane efflux FT protein, score 1.1e-44" FT misc_feature 251751..252344 FT /note="HMMPfam hit to PF02321, DE Outer membrane efflux FT protein, score 3.3e-55" FT CDS complement(252426..252677) FT /transl_table=11 FT /locus_tag="BB2530" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0987" FT /db_xref="GOA:Q7WJG4" FT /db_xref="InterPro:IPR007341" FT /db_xref="UniProtKB/TrEMBL:Q7WJG4" FT /protein_id="CAE33024.1" FT /translation="MSIIIMIIVGFVVGLIARAIMPGDQNMGYIMTTILGIIGSVVAGF FT LGQQLGWYAPGEPAGWIGSVVGAIIVLFVVGLVAKKRA" FT misc_feature complement(join(252441..252500,252528..252596)) FT /note="2 probable transmembrane helices predicted for FT BB2530 by TMHMM2.0 at aa 2-24 and 34-53" FT CDS complement(252823..253473) FT /transl_table=11 FT /locus_tag="BB2531" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0988" FT /db_xref="GOA:Q7WJG3" FT /db_xref="HSSP:1ON4" FT /db_xref="InterPro:IPR017936" FT /db_xref="UniProtKB/TrEMBL:Q7WJG3" FT /protein_id="CAE33025.1" FT /translation="MRAPHRRLAVSTMYSPLSGRAWRGLLLAMLMLLAACSERSADWSL FT YNVKGHLPDLKFSLPGAHGKTVSSDDLKGKTVLLFFGYASCPDVCPTTMAQLTAVLQQL FT GEQARDVRILFVSVDPHRDTPDILQAYVNAFNNNAIGVTGNEKQIADLARRYRVAYQIE FT KPKPGDDADIYDVTHSRGVYIFDNQGKARLLASDTDTIDTMVKDLRQLIAQTQ" FT misc_feature complement(252877..253401) FT /note="HMMPfam hit to PF02630, DE SCO1/SenC, score 1.4e-26" FT misc_feature complement(253351..253473) FT /note="Signal peptide predicted for BB2531 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.981) with cleavage site FT probability 0.737 between residues 41 and 42" FT misc_feature complement(253366..253398) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(253629..255743) FT /transl_table=11 FT /gene="prlC" FT /gene_synonym="opdA" FT /locus_tag="BB2532" FT /product="oligopeptidase A" FT /EC_number="3.4.24.70" FT /note="ortholog of Bordetella pertussis (BX470248) BP0989" FT /db_xref="GOA:Q7WJG2" FT /db_xref="InterPro:IPR001567" FT /db_xref="UniProtKB/TrEMBL:Q7WJG2" FT /protein_id="CAE33026.1" FT /translation="MACAPFGPRPLVHGIPKPMTQNPLLAPVADLVDYAAVKPEHIVPA FT VQALLDIARAAVEHAADPALPATWDAVVAPLDSASERLWRAWSVAGHLNAVVNTPVLRE FT AYNAALPLVTEFSTWVGLHEGLYRQYQRLQAAEDFAAWPPVRRRVVELALRDFRLSGVE FT LQGAARERYAEISDREAQASQKFSENVLDAIDAWSLLVDDQARLDGIPADVLAAARKAA FT EDDGATGWKLTLKMPCYLPVMQYARDRALRETLYRAYGTVASEHGDAAYDNSPLIEELL FT QLRADEAGLLQYPTFAALRLQTRMARDATEVVDFLRDLARRAKPYAERDLAELQAFATG FT ELGLAELQPWDVPFAAERLRESRYAYSEDEIKQYFTEPRVLAGLFEVIETLFDVRLREV FT PVSSWHADVRGVRVESPAGATLGHLYLDLYARAGKQSGAWVDSERSRRRVQGDLQTPVA FT YLTCNFSRPNGDKAALLTHDDVITLFHETGHALHALLSEVDEPGAAAFASVEWDAIELP FT SQFMENFCWEWSVVQKLSAHVETGQPLPRDLYDRLVAARNFQSGMQTVRQIEFALFDMM FT LHDRPQGAPIADVLALLQQVRQEVAVLFPPAWHRLPHSFSHLFAGGYGAGYYSYKWAEV FT LSADAYEAFEEAARQGEPAATTLDGATGARFRKEILAVGGARPAADSFRAFRGREPRID FT ALLRHSGMQA" FT misc_feature complement(253638..255020) FT /note="HMMPfam hit to PF01432, DE Peptidase family M3, FT score 4.2e-154" FT CDS complement(255819..256670) FT /transl_table=11 FT /gene="folD" FT /gene_synonym="ads" FT /locus_tag="BB2533" FT /product="FolD bifunctional protein [includes: FT methylenetetrahydrofolate dehydrogenase and FT methylenetetrahydrofolate cyclohydrolase]" FT /EC_number="1.5.1.5" FT /note="ortholog of Bordetella pertussis (BX470248) BP0990" FT /db_xref="GOA:Q7WJG1" FT /db_xref="HSSP:1A4I" FT /db_xref="InterPro:IPR000672" FT /db_xref="UniProtKB/Swiss-Prot:Q7WJG1" FT /protein_id="CAE33027.1" FT /translation="MTARIIDGAALSQRIREEVAQRVQALTAKGVRPGLAVVLVGDDPA FT SQVYVRNKVAACEKAGLHSVKEQYPADLTEAQLLERIDALNRDPSIHGILVQLPLPRHM FT DAHKVIEAIAAEKDVDGFHISNAGLLMTGQPLFRPCTPYGVMKMLESEGVALRGAEAVI FT VGASNIVGKPMAMLLLQAGATITICNSKTRDLGAQTRRADVLVVATGKPGMIDGSMIKP FT GAVVIDVGINRGADGKLCGDVDMASAREVAGAISPVPGGVGPMTIAMLLVNTVEAAERA FT AA" FT misc_feature complement(255825..256307) FT /note="HMMPfam hit to PF02882, DE Tetrahydrofolate FT dehydrogenase/cyclohydrolase, NAD(P)-binding domain, score FT 3.5e-92" FT misc_feature complement(255870..255896) FT /note="PS00767 Tetrahydrofolate FT dehydrogenase/cyclohydrolase signature 2." FT misc_feature complement(256311..256670) FT /note="HMMPfam hit to PF00763, DE Tetrahydrofolate FT dehydrogenase/cyclohydrolase, catalytic domain, score FT 5.5e-67" FT misc_feature complement(256371..256448) FT /note="PS00766 Tetrahydrofolate FT dehydrogenase/cyclohydrolase signature 1." FT CDS complement(256667..257293) FT /transl_table=11 FT /locus_tag="BB2534" FT /product="two-component response regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0991" FT /db_xref="GOA:Q7WJG0" FT /db_xref="HSSP:1DBW" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q7WJG0" FT /protein_id="CAE33028.1" FT /translation="MNTPHLSSTVFIVDDDEAVRDSLRWLLEANGYRVRAYASGENFLD FT EYDASQIGVLIADVRMPGMSGLELQEQLIARNAPLPIVFITGHGDVPMAVSTMKKGAVD FT FLEKPFNESDLREIVARMLEQAVQRISKFQAQKDHEAMLARLTAREQQVLERIVAGRLN FT KQIADDLGISIKTVEAHRANIMEKLEVTTVADLMKVALAKPEAHA" FT misc_feature complement(256673..256867) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00196, DE Bacterial regulatory FT proteins, luxR family, score 8.9e-20" FT misc_feature complement(256733..256816) FT /note="PS00622 Bacterial regulatory proteins, luxR family FT signature." FT misc_feature complement(256913..257272) FT /note="HMMPfam hit to PF00072, DE Response regulator FT receiver domain, score 6.6e-40" FT CDS complement(257290..259044) FT /transl_table=11 FT /locus_tag="BB2535" FT /product="tw-component sensor kinase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0992" FT /db_xref="GOA:Q7WJF9" FT /db_xref="InterPro:IPR013767" FT /db_xref="UniProtKB/TrEMBL:Q7WJF9" FT /protein_id="CAE33029.1" FT /translation="MSSPPKSNIPMSFRDHARARRRGVYWLTPALVLVLYICVMGVFFW FT LQRIHDDSVMFVTIDQELRQQRLIWVVLALSCVIVISLLMLWRYTRFRSEAEAALIAET FT GFRRAMENSMSTGMRVLDMEGRIAYVNPAFCRMIGWNEADLIGRSPPFPYWVPGRHEQH FT QHTLEVLTSGKTPSSGLEVEAQRRDGSRFTARMYVSPLLDPNGDQIGWMTSMTDITEPK FT RIREALTAAHERFMTVLEGLDDAISVTADTHDGLELLFANRTYRRVFGAQTGGHDELLA FT GRRGRFTDESVEVFAPSVQRWFEVHHRMLAWTDGRRVRMQVARDITERRVHEEASRVQQ FT EKIQLTSRLTTMGEMASSLAHELNQPLTAIANYSMGAVALVKAGHTSPNMLLPALEKAA FT SQAERAGKIISRIREFVKRSEPRRQRVAISRIVDNAIGFAEIDARKRRIRIERFVPSNA FT PDVLADPILIEQVLLNLLKNGLEAMEKSESDELKVAVIPHEQHIEVAVVDRGHGLPEPE FT RLFEPFFSTKSQGLGMGLNICRTIIESHHGRLWADPNPAGGTIFRFTLPCATPQSQAQN FT DQSEELHA" FT misc_feature complement(257341..257658) FT /note="HMMPfam hit to PF02518, DE Histidine kinase-, DNA FT gyrase B-, and HSP90-like ATPase, score 1.6e-32" FT misc_feature complement(257782..257994) FT /note="HMMPfam hit to PF00512, DE His Kinase A FT (phosphoacceptor) domain, score 1.3e-08" FT misc_feature complement(258382..258510) FT /note="HMMPfam hit to PF00785, DE PAC motif, score 4.2e-07" FT misc_feature complement(258535..258732) FT /note="HMMPfam hit to PF00989, DE PAS domain, score FT 6.7e-10" FT misc_feature complement(join(258778..258846,258907..258975)) FT /note="2 probable transmembrane helices predicted for FT BB2535 by TMHMM2.0 at aa 24-46 and 67-89" FT CDS 259337..262042 FT /transl_table=11 FT /gene="aceE" FT /locus_tag="BB2536" FT /product="pyruvate dehydrogenase E1 component" FT /EC_number="1.2.4.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP0993" FT /db_xref="GOA:Q7WJF8" FT /db_xref="InterPro:IPR004660" FT /db_xref="UniProtKB/TrEMBL:Q7WJF8" FT /protein_id="CAE33030.1" FT /translation="MSSFAQAGALAAANDEDTLETQEWLEALAAVLDREGPQRAHYLLE FT RLIDEARRSGAHIPFSPNTAYVNTIPPGLEPAHPGNLELEARIRSYVRWNAMAMVVRAN FT KHNPPDGGDLGGHIASFASLATMIGCGQNHFWHGETEEHGGDLVYFQGHTSPGMYGRAY FT LEGRLTEDQLNHFRQEVDGKGLSSYPHPKLMPDFWQFPTVSMGLGPLMAIYQARFLKYL FT HARGIADTSNRKVWVFCGDGEMDEPESLGAIALAAREKLDNLIFVINCNLQRLDGPVRG FT NGKIIQELEGDFRGSGWNVIKLIWGGYWDPLLAHDKEGILRRIMEEAVDGEYQAYKAND FT GKYVREHFFGKHPKLLEMVARMSDEDIWRLNRGGHDPHKVYAAFDAASKHAGQPTVILA FT KTIKGYGMGHVGQAKNPTHQQKKLELDSIREFRDRFGIPIPDDKLEELPYYKPAEDSPE FT MQYLHERRKALGGYLPKRRAKADEQLKAPALDAFKAVLEPTAEGREISTTQAFVRVLNQ FT ILRDKDLGPRVVPILADESRTFGMEGLFRQIGIYAPEGQKYTPVDKDQVMYYKESADGQ FT LLQEGINEAGAMSSWMAAATSYSTNNRIMVPFYIYYSMFGFQRVGDLAWAAGDMQARGF FT LLGGTAGRTTLNGEGLQHEDGHSHLLASTIPNCVSYDPTFAHELAVIIQHGLKRMVEDQ FT ENVYYYLTVMNENYPQPGLTAGDEEGIIRGMYKLKSHGKGKQRVQLMGSGTILREVMAA FT QELLEADWGVASDIWSVTSFTELRRDGLDAERHNLLHPEGKQQVPYVTTQLAKSEGPII FT ASTDYMKLFADQIRPFVPKDRTYKVLGTDGFGRSDFRYKLREHFEVDRHFVVLASLRAL FT ADEGKIPAAKVAEAIKKYGINPNKANPHHA" FT misc_feature 259586..260758 FT /note="HMMPfam hit to PF00456, DE Transketolase, thiamine FT diphosphate binding domain, score 5e-06" FT CDS 262055..263710 FT /transl_table=11 FT /gene="aceF" FT /locus_tag="BB2537" FT /product="dihydrolipoamide acetyltransferase component of FT pyruvate dehydrogenase complex" FT /EC_number="2.3.1.12" FT /note="ortholog of Bordetella pertussis (BX470248) BP0994" FT /db_xref="GOA:Q7WJF7" FT /db_xref="HSSP:1DPC" FT /db_xref="InterPro:IPR006256" FT /db_xref="UniProtKB/TrEMBL:Q7WJF7" FT /protein_id="CAE33031.1" FT /translation="MSNIVEIKVPDIGDFKEVEVIEVLVSAGDTIKAEQSLITVESDKA FT SMEIPASAAGVVKSVKVKVGDKIAEGTVILEVEAAGEAAAAPKAEQAPEAAEAPKADAA FT KAEAPQAEAPAAAGPIEVKVPDIGDFKEVEVIEVLVAEGDTIKAEQSLITVESDKASME FT IPASAGGVVQSLKVKVGDKVAMGTVIAVVQGQGAAAPAAKAEAPAAAPAAAEPAAPASP FT AAPAPAPAQRPAPAAALQDEDLKPGQLPHASPSVRKFARELGVNLSRVTGSAAKGRITA FT DDVRAYVKQALSAGAPAGASGGGDGAALGLLPWPKIDFTKFGPIEAKPLSRIKKISGAN FT LHRNWVMIPHVTNNDEADITDLEALRVALNKENEKSGVKVTMLAFLIKAVVAALKKFPE FT FNASLDGDNLVLKQYYHIGFAADTPNGLVVPVVRDADKKGILELARETSELARKAREGK FT VSPAEMQGGCFSISSLGGIGGTHFTPIINAPEVAILGVSRSAHKPVWDGKQFVPRLTLP FT LSLSYDHRVIDGASAARFNAYLGQLLADFRRIAL" FT misc_feature 262067..262285 FT /note="HMMPfam hit to PF00364, DE Biotin-requiring enzyme, FT score 1.4e-23" FT misc_feature 262136..262225 FT /note="PS00189 2-oxo acid dehydrogenases acyltransferase FT component lipoyl binding site." FT misc_feature 262412..262630 FT /note="HMMPfam hit to PF00364, DE Biotin-requiring enzyme, FT score 1.7e-22" FT misc_feature 262481..262570 FT /note="PS00189 2-oxo acid dehydrogenases acyltransferase FT component lipoyl binding site." FT misc_feature 262802..262918 FT /note="HMMPfam hit to PF02817, DE e3 binding domain, score FT 2.3e-13" FT misc_feature 263018..263704 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00198, DE 2-oxo acid dehydrogenases FT acyltransferase (catalytic domain), score 2.3e-122" FT CDS 263723..265498 FT /transl_table=11 FT /gene="lpdA" FT /gene_synonym="lpd" FT /locus_tag="BB2538" FT /product="dihydrolipoamide dehydrogenase" FT /EC_number="1.8.1.4" FT /note="ortholog of Bordetella pertussis (BX470248) BP0995" FT /db_xref="GOA:Q7WJF6" FT /db_xref="HSSP:1BHY" FT /db_xref="InterPro:IPR006258" FT /db_xref="UniProtKB/TrEMBL:Q7WJF6" FT /protein_id="CAE33032.1" FT /translation="MSNIVEIKVPDIGDFKEVEVIEVLVAAGDTIKAEQSLITVESDKA FT SMEIPASSAGVVKSVKVKVGDKVAEGTVILDVEAAGEAAAAPKAEAPKTEAPKAEAPKA FT PAAKASAPAAAAYSGSADLECDMLVLGAGPGGYSAAFRAADLGMDTVMVERYATLGGVC FT LNVGCIPSKALLHNAAVIDEARALAAHGISFGEPKVDLDKLRGYKDSVVAKLTGGLAGM FT ARARKVRVVTGTGEFADPHHLTVTDGEGKKQTIRFKQAIIAAGSQSVKLPFLPDDERIV FT DSTGALQLRAIPKKMLIIGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKVW FT QKMNAPRFDNIMLKTKTVGAEARKDGIYVSFEGEGAPKEPQRYDLVLQAVGRSPNGKKI FT GAERAGVAVTERGFIEVDRQMRTNVPHIYAIGDVVGQPMLAHKAVHEGHVAAEAAHGEK FT SFFDARVIPSVAYTDPEVAWVGLTEDEAKKQGVKVEKGLFPWAASGRAIANGRDEGFTK FT LLFDAETHRIVGGGIVGTHAGDLISEIALAIEMGADMVDIGKTIHPHPTLGESVGMAAE FT VAEGVCTDLPPMRKK" FT misc_feature 263735..263953 FT /note="HMMPfam hit to PF00364, DE Biotin-requiring enzyme, FT score 8.7e-24" FT misc_feature 263804..263893 FT /note="PS00189 2-oxo acid dehydrogenases acyltransferase FT component lipoyl binding site." FT misc_feature 264098..265048 FT /note="HMMPfam hit to PF00070, DE Pyridine FT nucleotide-disulphide oxidoreductase, score 1.4e-83" FT misc_feature 264200..264232 FT /note="PS00076 Pyridine nucleotide-disulphide FT oxidoreductases class-I active site." FT misc_feature 265118..265447 FT /note="HMMPfam hit to PF02852, DE Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation domain, FT score 1.2e-49" FT CDS complement(265721..266896) FT /transl_table=11 FT /gene="flaA" FT /locus_tag="BB2539" FT /product="flagellin" FT /note="ortholog of Bordetella pertussis (BX470248) BP0996" FT /db_xref="GOA:Q06064" FT /db_xref="HSSP:1UCU" FT /db_xref="InterPro:IPR001492" FT /db_xref="UniProtKB/Swiss-Prot:Q06064" FT /protein_id="CAE33033.1" FT /translation="MAAVINTNYLSLVAQNNLNKSQSALGSAIERLSSGLRINSAKDDA FT AGQAIANRFTANVKGLTQAARNANDGISIAQTTEGALNEINNNLQRIRELTVQASNGTN FT SASDIDSIQQEVNQRLEEINRIAEQTDFNGIKVLKSNATDMTLSIQVGAKDNETIDIKI FT DRNSNWNLYDAVGTVPGGTVNGEARTVNALGFDVLSAVTTTIASDTVTFDAAVAAAEQA FT AGAAVGDGSVVSYGDTANPQYAVVVDNAGTMTSYALTFDKDGKAALGDQLGAVASQAAE FT AAVGTNDVAAGANVTVSGGAADALSKLDDAMKAVDEQRSSLGAIQNRFESTVANLNNTI FT TNLSAARSRIEDSDYATEVSNMTKNQILQQAGTSVLAQANQVPQNVLSLLR" FT misc_feature complement(265790..266005) FT /note="HMMPfam hit to PF00700, DE Bacterial flagellin FT C-terminus, score 7.9e-41" FT misc_feature complement(266381..266812) FT /note="HMMPfam hit to PF00669, DE Bacterial flagellin FT N-terminus, score 2.6e-78" FT CDS complement(267283..268020) FT /transl_table=11 FT /gene="fliA" FT /gene_synonym="flaD" FT /locus_tag="BB2540" FT /product="RNA polymerase sigma factor for flagellar operon" FT /note="ortholog of Bordetella pertussis (BX470248) BP1021" FT /db_xref="GOA:Q7WJF5" FT /db_xref="InterPro:IPR000943" FT /db_xref="UniProtKB/TrEMBL:Q7WJF5" FT /protein_id="CAE33034.1" FT /translation="MPNPEDSLVQYAPLVRKLALQLLARLPSSVQLDDLVQAGMIGLLD FT AVRRYQESPDAQFETYATARIRGAMLDELRSQDWLPRSVRSKSRRIETAIQRKEQELMR FT APSEGEIAEELGVPLAEYQGMLADAQGVQILHYEDFNTDGDSDSPWAESSAEHADPLDA FT LLAGDLRRALIDAIDGLPEREKLLLSLCYEQGLNLKEIGAVLNVTEARVCQLRAQATAR FT IRARLKEQAWARLPTAHHLAQVV" FT misc_feature complement(267346..268017) FT /note="HMMPfam hit to PF00140, DE Sigma-70 factor, region FT 1.2, score 2.8e-59" FT misc_feature complement(267370..267435) FT /note="Predicted helix-turn-helix motif with score FT 1172.000, SD 3.18 at aa 196-217, sequence FT LNLKEIGAVLNVTEARVCQLRA" FT misc_feature complement(267880..267921) FT /note="PS00715 Sigma-70 factors family signature 1." FT CDS 268456..268779 FT /transl_table=11 FT /gene="flhD" FT /gene_synonym="flbB" FT /gene_synonym="frlA" FT /locus_tag="BB2541" FT /product="flagellar transcriptional activator FlbB" FT /note="ortholog of Bordetella pertussis (BX470248) BP1022" FT /db_xref="GOA:Q44730" FT /db_xref="HSSP:1G8E" FT /db_xref="InterPro:IPR007911" FT /db_xref="UniProtKB/Swiss-Prot:Q44730" FT /protein_id="CAE33035.1" FT /translation="MKTADSSLLADIREVNLSYLLLAQRMLRDDYAASMFRLGFSNEVA FT DILMRLSPAQLVKLASSSSLLCRFRFDDYSLLSALTQDVLGGALQQAHATILLARQPVE FT ELA" FT CDS 268814..269374 FT /transl_table=11 FT /gene="flhC" FT /gene_synonym="flaI" FT /gene_synonym="frlB" FT /locus_tag="BB2542" FT /product="flagellar transcriptional activator FlhC" FT /note="ortholog of Bordetella pertussis (BX470248) BP1023" FT /db_xref="GOA:Q44731" FT /db_xref="InterPro:IPR007944" FT /db_xref="UniProtKB/TrEMBL:Q44731" FT /protein_id="CAE33036.1" FT /translation="MATKSVSQEADEILLASSMITLGARLQVLQAETGLSHDRLARLYR FT EIRGCSPPKGMLPFSVDWFMTWLPNIHSSLFYNVYTFLNQRTSSRGIRAVIDAYRLYLE FT HAPADAAEPVLSFTRAWMLVRFFDGGMLQLSGCRQCGGHFIAHAHDPQTDFVCAICRPP FT PRAGKTRAAARARAGQLAAPARP" FT CDS 269495..270370 FT /transl_table=11 FT /gene="motA" FT /locus_tag="BB2543" FT /product="chemotaxis protein MotA" FT /note="ortholog of Bordetella pertussis (BX470248) BP1024" FT /db_xref="GOA:Q7WJF4" FT /db_xref="InterPro:IPR000540" FT /db_xref="UniProtKB/TrEMBL:Q7WJF4" FT /protein_id="CAE33037.1" FT /translation="MLIVIGYAVVILAVVGSFIGLGGHLGALYQPFELTLIAGAAVGAF FT MAGNSRKSLGLVAKAIPEAFRSSPYSKDVYMELMALLYVLLNKARREGLMAIESHIEDP FT LSSPIFNEYPRIMKDAKLMEFITDYLRIMISGNMSSFEIETLMDEEIETYRHEREVPTH FT ALQQVADALPAFGIVAAVLGVIKALAAVDQPPAILGDLISKAMVGTFLGVLLAYGFVAP FT MAARIERRTSESVKVLECIKVTLLASMNGYPPQLAVEFGRKVLFSAVRPSFGELEEHVR FT QAKSAATGRA" FT misc_feature join(269498..269566,269576..269644,269996..270064, FT 270107..270175) FT /note="4 probable transmembrane helices predicted for FT BB2543 by TMHMM2.0 at aa 2-24, 28-50, 168-190 and 205-227" FT misc_feature 270107..270160 FT /note="PS01307 Flagellar motor protein motA family FT signature." FT CDS 270383..271330 FT /transl_table=11 FT /gene="motB" FT /locus_tag="BB2544" FT /product="chemotaxis protein MotB" FT /note="ortholog of Bordetella pertussis (BX470248) BP1025" FT /db_xref="GOA:Q7WJF3" FT /db_xref="InterPro:IPR006665" FT /db_xref="UniProtKB/TrEMBL:Q7WJF3" FT /protein_id="CAE33038.1" FT /translation="MSTVNNHRVVIRRRKVRRGGHHGGSWKIAYADFITAMMAFFLVMW FT LISIVPREELKGIAEYFRMPLRVALTGGPSSSAETSAIPGGGQDPLRSQGDVRRAEGNR FT VEAQPMGDAERRDRHRLERLKVRLENLIEESPVLKNFRPQLLIDMTTEGLRIQIVDNQN FT RPMFATGSADVQPYMRDILRELGPVLNDLPNKISIAGHTDASQYARGERAYSNWELSAD FT RANASRQELVAGGMHEGKVLRIQGLASSMSLVKDDPFAAVNRRISLVVLNASTQRRIEN FT ENAAAADVNARDAQGVGAALAGQLAASGSDGGAR" FT misc_feature 270464..270532 FT /note="1 probable transmembrane helix predicted for BB2544 FT by TMHMM2.0 at aa 28-50" FT misc_feature 270878..271174 FT /note="HMMPfam hit to PF00691, DE OmpA family, score FT 7.9e-21" FT CDS 271345..271725 FT /transl_table=11 FT /gene="cheY" FT /locus_tag="BB2545" FT /product="chemotaxis protein CheY" FT /note="ortholog of Bordetella pertussis (BX470248) BP1026" FT /db_xref="GOA:Q7WJF2" FT /db_xref="HSSP:1JBE" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q7WJF2" FT /protein_id="CAE33039.1" FT /translation="MTARILVADDSATMRMIVQAALTGAGWQVVTASDGKQALELAQAQ FT AVDLVVSDWNMPVMGGLDLIRGLRGQARYQDLPVLVLTTEDDGDSKAAARDLGVCGWLN FT KPLDPDVLVDLAAELLGVAPGA" FT misc_feature 271351..271716 FT /note="HMMPfam hit to PF00072, DE Response regulator FT receiver domain, score 7.6e-29" FT CDS 271752..273815 FT /transl_table=11 FT /gene="cheA" FT /locus_tag="BB2546" FT /product="chemotaxis protein CheA" FT /note="ortholog of Bordetella pertussis (BX470248) BP1028" FT /db_xref="GOA:Q7WJF1" FT /db_xref="HSSP:1I5N" FT /db_xref="InterPro:IPR015162" FT /db_xref="UniProtKB/TrEMBL:Q7WJF1" FT /protein_id="CAE33040.1" FT /translation="MSSGLDLSQFYETFFDEADELLAQMEQLLLELDVGAPDIEQLNAI FT FRAAHSIKGGAATFGCFQKLAGTTHLLENLLDAIRRGEMGLRAGMVDIFLETKDVLKSQ FT LDAYRASEEPEDAVFERICAVLRQLALEGGQAPAAAAPAPVAAPEPGPEPAPAPQPAAA FT STAAGLPLRVRFSKVSDKDAQSLLEEMGNLGDVRASERAGQTLTVWVDTTCSPDDIEAV FT CCFIIDADQLEIAREAEPAHASAQAAVAAAPDAAATPAPAPVAAPAAAQAAEPARAARP FT SIAPAHADKESTSIRVGVEKVDQVINLVGELVITQAMLAQTASTLDPVLHDRLLNGMEQ FT LERNARDLQEAVMSIRMMPMDYVFSRFPRLVRDIAGKMGKQIELQTYGRATELDKSLIE FT RIIDPLTHLVRNSLDHGIETPDKRVAAGKEPVGQLVLSAQHNGGNIVIEVSDDGGGLSR FT ERILRKAVAQGLTVNENSPDDEIWQLIFAPGFSTADQVTDISGRGVGMDVVRRNIQDMG FT GHVQLSSVPGQGTTTRIVLPLTLAILDGMSVRVGEETFILPLNHVTESLQPQADQIYSV FT AGNERVMQVRGEYLPLVEMHRVFSVGQAQADPTQAIAVIMQAEERRFALLVDHLVGQHQ FT VVVKNLESNYRKVPGISAATILGDGSVALIVDVFALARANREKWSQPEAILN" FT misc_feature 271770..272087 FT /note="HMMPfam hit to PF01627, DE Hpt domain, score 2e-35" FT misc_feature 271791..271817 FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT misc_feature 272625..272816 FT /note="HMMPfam hit to PF02895, DE Signal transducing FT histidine kinase, homodimeric domain, score 1.6e-22" FT misc_feature 272949..273368 FT /note="HMMPfam hit to PF02518, DE Histidine kinase-, DNA FT gyrase B-, and HSP90-like ATPase, score 1.1e-25" FT misc_feature 273375..273779 FT /note="HMMPfam hit to PF01584, DE CheW-like domain, score FT 6.1e-32" FT CDS 273830..274330 FT /transl_table=11 FT /gene="cheW" FT /locus_tag="BB2547" FT /product="chemotaxis protein CheW" FT /note="ortholog of Bordetella pertussis (BX470248) BP1029" FT /db_xref="GOA:Q7WJF0" FT /db_xref="InterPro:IPR002545" FT /db_xref="UniProtKB/TrEMBL:Q7WJF0" FT /protein_id="CAE33041.1" FT /translation="MAAKPHTQATRAEDVGNEFLVFTLGEEEYGIDILKVQEIRGYDAA FT TVTRIANVPSFIKGVTNLRGIIVPIVDLRIKFNLGSVEYNEQTVVIILNLDRRVVGIVV FT DGVSDVLMLNAAQVRPAPEFGATLSTEYLTGLGTVDERMLILVDIEKLMTSDEMALVEK FT VAS" FT misc_feature 273875..274300 FT /note="HMMPfam hit to PF01584, DE CheW-like domain, score FT 5.6e-49" FT CDS 274404..276110 FT /transl_table=11 FT /gene="tsr" FT /gene_synonym="cheD" FT /locus_tag="BB2548" FT /product="methyl-accepting chemotaxis protein I" FT /note="ortholog of Bordetella pertussis (BX470248) BP1030" FT /db_xref="GOA:Q7WJE9" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q7WJE9" FT /protein_id="CAE33042.1" FT /translation="MRKFLANLSIRGSLLGVLAFFSFMLVVGAALGVLSLRVSNDTLQG FT VKQTQDVADAMDRVVNSYKDALNGLGRAAASHYGAIVSAIGQPVQVEQGLGSEAAGLLQ FT RAKASLNRAETEYEYYKGLARPASAADSLKEVENAFEALVGQGLHPLAAALEKGDMAGY FT QLHAQNVLDALEGRFSGAIAAFDFWRASELLDAHEVAETRYRFVLAAVAAGGVLAALLV FT FSTYLFLRRRVLQPLREVGQHFDKIAAGDLTARVDVRNSNEIGQLFAGLKRMEESLTRT FT VAAVRRGVDEINVGSREISAGNTDLSSRTEEQAASLEETAASMEQLASTVKQNADNARQ FT ANQLAGVASDVAERGGSAVSEVVATMQDISASSRKISEIVSVIDGIAFQTNILALNAAV FT EAARAGEQGKGFAVVAGEVRSLAQRSAQAAKEIKVLIEDSVGKVGTGSQQVERAGATMQ FT EIVASVKRVTDIMGEISAASDEQSSGIEQVNRAVSQMDEVTQQNAALVEEAAAAAGSLQ FT EQAQRLAEAVAVFRINAGEVIDLPARQLGSRQAPGARETALAHDDALALGH" FT misc_feature 274404..274490 FT /note="Signal peptide predicted for BB2548 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.658 between residues 29 and 30" FT misc_feature join(274446..274514,275019..275087) FT /note="2 probable transmembrane helices predicted for FT BB2548 by TMHMM2.0 at aa 15-37 and 206-228" FT misc_feature 275034..275243 FT /note="HMMPfam hit to PF00672, DE HAMP domain, score FT 9.7e-14" FT misc_feature 275304..276002 FT /note="HMMPfam hit to PF00015, DE Methyl-accepting FT chemotaxis protein (MCP) signaling domain, score 3.7e-111" FT CDS 276119..276979 FT /transl_table=11 FT /gene="cheR" FT /gene_synonym="cheX" FT /locus_tag="BB2549" FT /product="chemotaxis protein methyltransferase" FT /EC_number="2.1.1.80" FT /note="ortholog of Bordetella pertussis (BX470248) BP1031" FT /db_xref="GOA:Q7WJE8" FT /db_xref="HSSP:1BC5" FT /db_xref="InterPro:IPR000780" FT /db_xref="UniProtKB/TrEMBL:Q7WJE8" FT /protein_id="CAE33043.1" FT /translation="MATAMTTPAFSAERQFEFRDADFARVRQMIYARAGISLGAHKREM FT VYSRLARRLRALGQQEFRVYLDGLENEPAAPEWEDFVNALTTNLTAFFRESHHFPILAD FT FARQRGGPVSVWCCAASTGEEPYSIAMTLVESLGARAQASQLLATDIDTNCLQRARAGV FT YPYERVAKLDPARLKRFFMRGRGANEGQVKVRAELADMVRFETLNLLAPHWPINEKFDA FT IFCRNVMIYFDKPTQARILRRFVPLLKPGGLLFAGHSENFTYISRDFRLRGQTVYEQAS FT GELPV" FT misc_feature 276173..276343 FT /note="HMMPfam hit to PF03705, DE CheR methyltransferase, FT all-alpha domain, score 5.8e-16" FT misc_feature 276380..276955 FT /note="HMMPfam hit to PF01739, DE CheR methyltransferase, FT SAM binding domain, score 9.7e-77" FT CDS 276976..278028 FT /transl_table=11 FT /gene="cheB" FT /locus_tag="BB2550" FT /product="protein-glutamate methylesterase" FT /EC_number="3.1.1.61" FT /note="ortholog of Bordetella pertussis (BX470248) BP1032" FT /db_xref="GOA:Q7WJE7" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/Swiss-Prot:Q7WJE7" FT /protein_id="CAE33044.1" FT /translation="MKKIKVLCVDDSALVRGLMTEIINSHPDMEVVATAPDPLVARELI FT KKHNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTERGGEITLRALELGAIDF FT VTKPKLGIRDGLIEYSEVIADKIRAASRARLRAPAPAGHAAPLRLRSPFASSEKLVIVG FT ASTGGTEAIREVLQPLPADSPAILITQHMPAGFTRSFAQRLDALCAVTVREASDGERVL FT PGHVYLAPGGETHMRLGRSGANYVIGLQASEPVNRHRPSVDVLFHSAAEAAGGNAIGVI FT LTGMGKDGAAGLLAMKRAGARTMAQDEASCVVFGMPREAIALGAADEVVPLADISERIL FT TRLGDRGHRV" FT misc_feature 276985..277356 FT /note="HMMPfam hit to PF00072, DE Response regulator FT receiver domain, score 1e-31" FT misc_feature 277450..278001 FT /note="HMMPfam hit to PF01339, DE CheB methylesterase, FT score 2e-110" FT CDS 278081..278470 FT /transl_table=11 FT /gene="cheY" FT /locus_tag="BB2551" FT /product="chemotaxis protein CheY" FT /note="ortholog of Bordetella pertussis (BX470248) BP1033" FT /db_xref="GOA:Q7WJE6" FT /db_xref="HSSP:1JBE" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q7WJE6" FT /protein_id="CAE33045.1" FT /translation="MVDKGMKILVVDDFPTMRRIIRNLLKELGFENVDEAEDGAIGLEK FT LRNGAFQFVVSDWNMPNLDGLEMLKQIRADAALKSLPVLMVTAEAKKENIVAAAQAGAN FT GYVVKPFTAATLEEKLNKIFEKLAG" FT misc_feature 278096..278464 FT /note="HMMPfam hit to PF00072, DE Response regulator FT receiver domain, score 2.3e-41" FT CDS 278479..279111 FT /transl_table=11 FT /gene="cheZ" FT /locus_tag="BB2552" FT /product="chemotaxis protein CheZ" FT /note="ortholog of Bordetella pertussis (BX470248) BP1034" FT /db_xref="GOA:Q7WJE5" FT /db_xref="InterPro:IPR007439" FT /db_xref="UniProtKB/TrEMBL:Q7WJE5" FT /protein_id="CAE33046.1" FT /translation="MNATDTGMQADPTDLIQRIASLTRMLRDSMRELGLDQAIKDAAEA FT IPDARDRLRYVAQMTEQAANRVLNATEAAGPIQDGMARGAQALDARWQQWYDQPLELPQ FT ARVLVQDTRAFLAAVPQHTQQTQAKLMEIVMAQDFQDLTGQVIMRMMDVVGAIERELLQ FT VLLDNVPQERRDEANSLLNGPQVNPGGKADVVTSQDQVDDLLASLGF" FT CDS 279339..280493 FT /transl_table=11 FT /gene="flhB" FT /locus_tag="BB2553" FT /product="flagellar biosynthetic protein FlhB" FT /note="ortholog of Bordetella pertussis (BX470248) BP1366" FT /db_xref="GOA:Q7WJE4" FT /db_xref="InterPro:IPR006135" FT /db_xref="UniProtKB/TrEMBL:Q7WJE4" FT /protein_id="CAE33047.1" FT /translation="MAEESDLEKSEAASPRRLEKAREEGQIARSRELGTFMMLAAGVAG FT VWLSGSMLYQGLTGVLRRGLGFEPRVAQDPGVMVEQAVHGAGRALLTVLPMFGMLAVVA FT VLSAVLLGGFVFSTKPLEPNFSKLSLWSGIKRMFSAQTVVELVKALAKAALVGGVAVWV FT IWHYHDDMLGLMHVAPSAALTSAMSLVALCSALIVGSLLFVVLLDVPWQIWNHLKKLRM FT TKEDVRQEHKESEGDPHVKGRIRQQQRAMARRRMMSEVPGADVVVTNPTHYAVALKYAD FT GEAGAPRVVAKGTGLIAARIRELAAEHRIPTLEAPPLARALHQHVELGQEIPTALYTAV FT AEVLAWVFQLRSWRPGLGREPQAPTALAVPAELDPHSPPATQGA" FT misc_feature 279354..280382 FT /note="HMMPfam hit to PF01312, DE FlhB HrpN YscU SpaS FT Family, score 4.2e-143" FT misc_feature join(279444..279512,279618..279686,279765..279833, FT 279891..279959) FT /note="4 probable transmembrane helices predicted for FT BB2553 by TMHMM2.0 at aa 36-58, 94-116, 143-165 and FT 185-207" FT CDS 280497..282614 FT /transl_table=11 FT /gene="flhA" FT /locus_tag="BB2554" FT /product="flagellar biosynthesis protein FlhA" FT /note="ortholog of Bordetella pertussis (BX470248) BP1367" FT /db_xref="GOA:Q7WJE3" FT /db_xref="InterPro:IPR006301" FT /db_xref="UniProtKB/TrEMBL:Q7WJE3" FT /protein_id="CAE33048.1" FT /translation="MSALLSMLKTNGAANAKLLAGPILIVLVLGMMVLPLPTFLLDLLF FT TFNIALSVMILLVAMFTRKPLDFAAFPSVLLFATLLRLSLNVASTRVVLLNGHQGPDAA FT GKVIEAFGHFLVGGNFAVGIILFVILTIINFIVITKGAGRIAEVGARFTLDAMPGKQMA FT IDADLNAGLIGEDEARKRRAEVAQESDFFGSMDGASKFVRGDAIAGLLIMVINVIGGLI FT VGVAQHDLSVGESARVYTLLTIGDGLVAQIPALVISTAAGVVVSRVATDQDVGQQILSQ FT LFSNPNVMFLTAAIVGIMGLIPNMPHLAFLTLAALLAGCGWMVYKRNLAAASQAQQPAE FT TAAAQAQAAASEATWEDVSMVDQLGLEVGYRLIPLVDHAQNGELLHRIRSLRKKFAQDV FT GFLPPVVHIRDNLELKPNDYRILLSGVEIGRGVAMPGQWLAIDPGGVAMQVKGTPTTDP FT AFGLPALWIDSGQRDQAQVAGYTVVDASTVVATHLNHLMHRHGDNLLGRQEVQALIERI FT GRESPKLVEDLVPKTLSLTTLQKVLQGLLAEEVPIRDMRTIVDTLSEHAPRLAALAANA FT GGQPDVHELVALTRRSLGRAITQQWFPGEGELRVIGLDVRLERVLTQAMATSGGLEPGL FT AETLLRETEAALARQEAQGNAPVLLTSPPLRAPLSRFLRHHLPQLGVLSNAEIPDERVV FT RVTALIGGNGE" FT misc_feature join(280530..280598,280611..280679,280713..280781, FT 280839..280907,281112..281180,281238..281306, FT 281343..281402,281412..281471) FT /note="8 probable transmembrane helices predicted for FT BB2554 by TMHMM2.0 at aa 12-34, 39-61, 73-95, 115-137, FT 206-228, 248-270, 283-302 and 306-325" FT misc_feature 280575..282578 FT /note="HMMPfam hit to PF00771, DE FHIPEP family, score 0" FT misc_feature 280926..280997 FT /note="PS00994 Bacterial export FHIPEP family signature." FT misc_feature 281424..281456 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 282611..284983 FT /transl_table=11 FT /gene="flhF" FT /locus_tag="BB2555" FT /product="flagellar biosynthesis protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1368" FT /db_xref="GOA:Q7WJE2" FT /db_xref="HSSP:1FFH" FT /db_xref="InterPro:IPR000897" FT /db_xref="UniProtKB/TrEMBL:Q7WJE2" FT /protein_id="CAE33049.1" FT /translation="MKLSRFVAASSREVMRLVREALGPDALIVSNRSVAEGIEVVATLD FT ETPAAAPATPLPDAPAAPPADMPAADAAAPLSMARLPDAPMPAAMPAGRVAPGLEAGVQ FT AAIDALRGSLESRMDGLLWSTREGPGREPVGAGLFRALLEAGFSMPLARILLERLPQAL FT DATQALAWARNELVTHLPVLRREDDLLAGGGVFALVGPTGVGKTTTLAKLAARCVAREG FT REQVAMLTTDNFRIGALEQLQIYGRLMGIPAHSVRDADELRDALGSLGNRRIILIDTTG FT ISQRDRQVAGQAAMLCNAGKPVRRLLVLNAASQGDTLDEVAHAYRNGVGEDVVGCIITK FT LDEASRLAPALDTAIRHRLPIHYVSYGQKVPEHMALARADELIDRTLATLQRVKPLYAP FT SEADLAALCSASREQARDEPAQRRQMLAATLLGQGGAAARDLDGALDWLRDDPACAQAR FT SDWRAAMAGPATARALGDAGLALARQAYPAASSRYLLAMHGKAALRAAGLPQATLLSAL FT LMSDRGAALAAPAQQLMLQHGLLAAYAPGEPAGANPIQALLARTDYLSGALAQLPHVHV FT FDAGSAPPWQALAGQDAGWLARCAGATRVQQDLCPTLLRAVARGLGYLPVGNVAVPGKG FT SAPLALWAGSADVSLAARGQAPLAVRMVSARLLDPSSGRQVAQWFGLTNLAATQADAAT FT LARWLVQYEQARGAFRYMAHAWAALPPDAGDAAALAARALAAGQLGAACWQLEHQAQAA FT AMRQALPGLLGPGARKTPARLAPAALMKLFALLEMAG" FT misc_feature 283181..283777 FT /note="HMMPfam hit to PF00448, DE SRP54-type protein, FT GTPase domain, score 2.5e-23" FT misc_feature 283208..283231 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(285001..285483) FT /transl_table=11 FT /locus_tag="BB2556" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1370" FT /db_xref="GOA:Q7WJE1" FT /db_xref="InterPro:IPR007809" FT /db_xref="UniProtKB/TrEMBL:Q7WJE1" FT /protein_id="CAE33050.1" FT /translation="MNSAALKSCLERENALVVEFLHALEAETEALMDRRAHESLQAAVQ FT RKEALADDLARLGAERDTLLSGAGLASGPAGTDAAAAAHPELGPLWQALQANAAQAREH FT NQRNGTLIAVNLRHTQESLDALRQAAGTGAAATYDAQGRGKRGYSSAASGRAIVAT" FT CDS complement(285500..285790) FT /transl_table=11 FT /gene="flgM" FT /locus_tag="BB2557" FT /product="negative regulator of flagellin synthesis" FT /note="ortholog of Bordetella pertussis (BX470248) BP1371" FT /db_xref="GOA:Q7WJE0" FT /db_xref="InterPro:IPR007412" FT /db_xref="UniProtKB/TrEMBL:Q7WJE0" FT /protein_id="CAE33051.1" FT /translation="MKIQSSTSHPVGPNAVGARAEHAVAQAYGGGAQAGSGSAQVALSP FT ASRQLLAQEGGSDIDVERVAAIRAAIASGQLRIDPTRIADSLIASARDLLK" FT CDS complement(285917..286627) FT /transl_table=11 FT /gene="flgA" FT /locus_tag="BB2558" FT /product="flagella basal body P-ring formation protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1372" FT /db_xref="GOA:Q7WJD9" FT /db_xref="InterPro:IPR013974" FT /db_xref="UniProtKB/TrEMBL:Q7WJD9" FT /protein_id="CAE33052.1" FT /translation="MKSPRSRSIARLAALAILAGAMPRAAAEPPAQDPAELAAAAESYL FT RQQLAALPGEPSITLDPLRTDRLDACEALTPFMPSGMRVRARMTVGLRCVAPRTWTVYA FT QATVSVPGQYYVAARQIAPGKTIEAADLTTRDGDLVALPPGVITDAAAILGMRPAHRIA FT AGQPIKGAGLRSAESVSRGQSVRITARGNGFVVSSEGQALDNAPPGATVQVRTASGQVV FT SGIVQAAGLVEIQL" FT misc_feature complement(285923..286426) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03240, DE FlgA family, score FT 1.5e-29" FT misc_feature complement(286550..286627) FT /note="Signal peptide predicted for BB2558 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.647 between residues 26 and 27" FT CDS 286811..287218 FT /transl_table=11 FT /gene="flgB" FT /gene_synonym="flbA" FT /gene_synonym="fla FII" FT /locus_tag="BB2559" FT /product="flagellar basal-body rod protein FlgB" FT /note="ortholog of Bordetella pertussis (BX470248) BP1373" FT /db_xref="GOA:Q7WJD8" FT /db_xref="InterPro:IPR006300" FT /db_xref="UniProtKB/TrEMBL:Q7WJD8" FT /protein_id="CAE33053.1" FT /translation="MLDRLNEDFRFFQQSIALRAQRQEVLSSNIANADTPNYKARDFDF FT KAAMQGALEQRMRLPDTNLALTSARHIPGQATTPSPAELMYRLPYQPSLDGNTVDMDSE FT RVRFADNTLHYQSSLQVLSGRIRSLMSAIQE" FT misc_feature 286835..286927 FT /note="HMMPfam hit to PF00460, DE Flagella basal body rod FT protein, score 1.9e-06" FT CDS 287231..287650 FT /transl_table=11 FT /gene="flgC" FT /gene_synonym="flaW" FT /gene_synonym="fla FIII" FT /locus_tag="BB2560" FT /product="flagellar basal-body rod protein FlgC" FT /note="ortholog of Bordetella pertussis (BX470248) BP1374" FT /db_xref="GOA:Q7WJD7" FT /db_xref="InterPro:IPR019776" FT /db_xref="UniProtKB/TrEMBL:Q7WJD7" FT /protein_id="CAE33054.1" FT /translation="MSLLSIFEIAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRAR FT QVVFQVNPPPGQAFGQEIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVA FT ETVNMIAASRSYQANVEVLNTAKQLMLKTLTIGQS" FT misc_feature 287249..287344 FT /note="HMMPfam hit to PF00460, DE Flagella basal body rod FT protein, score 1.1e-08" FT misc_feature 287267..287329 FT /note="PS00588 Flagella basal body rod proteins signature." FT CDS 287698..288402 FT /transl_table=11 FT /gene="flgD" FT /gene_synonym="flaV" FT /gene_synonym="fla FIV" FT /locus_tag="BB2561" FT /product="basal-body rod modification protein FlgD" FT /note="ortholog of Bordetella pertussis (BX470248) BP1375" FT /db_xref="InterPro:IPR005648" FT /db_xref="UniProtKB/TrEMBL:Q7WJD6" FT /protein_id="CAE33055.1" FT /translation="MTTVNETTSQAGLALAQAGSNSAAQGIQDQFLTLLVTQLRNQDPL FT NPMENAELTSQLAQISTVEGINNLKNTMLAISGQIDVSQSMDAVSMIGKGVLMPGDKVS FT LGTDPNDPAQRGATPFGIDLQGDATKVTVKVLDPSGAVVRTMELGDLKTGVHTLQWDGK FT NDGGQPLADGKYSITVSASDAEAVPVKAEALTYGQVKSVAYSTNGLRLDLGLAGQISML FT DVRKVIGASGSA" FT misc_feature 287698..287766 FT /note="Signal peptide predicted for BB2561 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.780) with cleavage site FT probability 0.389 between residues 23 and 24" FT misc_feature 287701..288138 FT /note="HMMPfam hit to PF03963, DE Flagellar hook capping FT protein, score 6.1e-32" FT CDS 288469..289890 FT /transl_table=11 FT /gene="flgE" FT /gene_synonym="flaK" FT /gene_synonym="fla FV" FT /locus_tag="BB2562" FT /product="flagellar hook protein FlgE" FT /note="ortholog of Bordetella pertussis (BX470248) BP1376" FT /db_xref="GOA:Q7WJD5" FT /db_xref="InterPro:IPR020013" FT /db_xref="UniProtKB/TrEMBL:Q7WJD5" FT /protein_id="CAE33056.1" FT /translation="MGFGQALSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYAS FT SRVGLGVKVSAINQRFTVGNISMTNGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVD FT KNFYVVNAQGFRLTGYPAGAVGAQPVDLQLPPGNIAPRPASTAGLQGNLNANAKLINPN FT DTPAVDGTVELDGTSYSFTNAGGVFAWVAPGPVDGTYNGGDIVIAGGAVTGDLASQPGY FT QPYQPLVAGIPFDPTNPLSYTDQVPTTVYDSLGNSHQMVQYFAKRPAVGTESVYEVYYV FT LDGQPMQVNGGASQTLNFDTAGNLLNQPPTAQVTFANPGGNAAPADPLAITVSYNGVTQ FT YGSDFAPKVVQNGYSSGEYMGLSVGEDGSLVAKYTNGETQTIGTVVLANFNNVQGLKPV FT GNNAWAETSESGQATLGQPGTNGLATIVGQALEGSNVDLSSELVNMIVAQRTYQANAQ |