EBI Dbfetch

ID   BX640443; SV 1; linear; genomic DNA; STD; PRO; 346274 BP.
XX
AC   BX640443;
XX
DT   09-AUG-2003 (Rel. 76, Created)
DT   29-JUL-2008 (Rel. 96, Last updated, Version 5)
XX
DE   Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
XX
KW   complete genome.
XX
OS   Bordetella bronchiseptica
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
XX
RN   [2]
RP   1-346274
RA   Sebaihia M.;
RT   ;
RL   Submitted (06-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL   Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute,
RL   Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail:
RL   ms5@sanger.ac.uk
XX
RN   [3]
RA   Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E.,
RA   Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L.,
RA   Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A.,
RA   Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I.,
RA   Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T.,
RA   Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S.,
RA   Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E.,
RA   Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M.,
RA   Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S.,
RA   Barrell B.G., Maskell D.J.;
RT   "Comparative analysis of the genome sequences of Bordetella pertussis,
RT   Bordetella parapertussis and Bordetella bronchiseptica";
RL   Nat. Genet. 35(1):0-0(2003).
XX
DR   EMBL-CON; BX470250.
DR   RFAM; RF00005; tRNA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..346274
FT                   /organism="Bordetella bronchiseptica"
FT                   /strain="RB50"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:518"
FT   CDS             100..918
FT                   /transl_table=11
FT                   /locus_tag="BB1951"
FT                   /product="putative integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2892"
FT                   /db_xref="GOA:Q7WL00"
FT                   /db_xref="InterPro:IPR002781"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WL00"
FT                   /protein_id="CAE32448.1"
FT                   /translation="MDVVMLICLLALGAVVGFAAGLLGIGGGMLLVPFLTMLFAWQGMP
FT                   GDLVVHAAIATSMTSILFTSVSSVRAHQKRGTIQWSIVWAMAPGIIIGGLLSGGAVFAA
FT                   LSTAWLSLFFALFVGYSGWNMLRSKKPKASRQMPGIVGTSAAGAGIGFLSGLVGAGGGF
FT                   LSVPFMVWCNVALHTAVSTSAALGFPIALANSVGYVISGLNESVTRPGMLGYIYWPALL
FT                   ALVATSVLTAPLGARMAHRLPVGTLKRVFATLLFALAAYMLTKAWQAFMV"
FT   misc_feature    100..156
FT                   /note="Signal peptide predicted for BB1951 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.995) with cleavage site
FT                   probability 0.683 between residues 19 and 20"
FT   misc_feature    join(118..186,244..303,337..405,418..477,535..603,631..699,
FT                   736..804,847..900)
FT                   /note="8 probable transmembrane helices predicted for
FT                   BB1951 by TMHMM2.0 at aa 7-29, 49-68, 80-102, 107-126,
FT                   146-168, 178-200, 213-235 and 250-267"
FT   misc_feature    373..888
FT                   /note="HMMPfam hit to PF01925, DE Domain of unknown
FT                   function DUF81, score 4.1e-14"
FT   CDS             complement(1016..1627)
FT                   /transl_table=11
FT                   /locus_tag="BB1952"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2891"
FT                   /db_xref="HSSP:1E6B"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ9"
FT                   /protein_id="CAE32449.1"
FT                   /translation="MKLIGSLTSPYVRKVRVVMAEKKLDYQLELENVWSPDSQVQKYNP
FT                   LGKVPCLVMEDGGALFDSRVIVEYLDTLSPVARLIPQPGRERAAVKCWEAIADGLLDAC
FT                   VTVVRERLRPAAQQSPEWIERQYGKVRASLDAMDHSLGENAHCMGVNYSLADIAVGCAL
FT                   GYLDLRFADLDWRADHANLARLYEKLSARPSFVDSMPPTA"
FT   misc_feature    complement(1049..1387)
FT                   /note="HMMPfam hit to PF00043, DE Glutathione
FT                   S-transferase, C-terminal domain, score 3.8e-07"
FT   misc_feature    complement(1412..1627)
FT                   /note="HMMPfam hit to PF02798, DE Glutathione
FT                   S-transferase, N-terminal domain, score 6.1e-10"
FT   CDS             1742..3163
FT                   /transl_table=11
FT                   /gene="purB"
FT                   /locus_tag="BB1953"
FT                   /product="adenylosuccinate lyase"
FT                   /EC_number="4.3.2.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2890"
FT                   /db_xref="GOA:Q7WKZ8"
FT                   /db_xref="HSSP:1DOF"
FT                   /db_xref="InterPro:IPR004769"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ8"
FT                   /protein_id="CAE32450.1"
FT                   /translation="MVKSPGLQPLPSYTDMQIADQLTQLNALSPLDGRYASRAGALRGL
FT                   LSEAGFMAHRVEVEVAWLVALSDAGLPELPAFPAAARERLAALVRNFSEADAARIKDIE
FT                   RVTNHDVKAVEYWLKEQVADDAELARAAEFIHFACTSEDINNTSHALMLTRARAEVVVP
FT                   QLNQVLAKLNELARTHADQPMLSRTHGQPASPTTLGKEFANVAARLQRAVAAIEAVEPL
FT                   AKLNGATGNYNAHLSAYPEIDWPAFSRNVLAGLGLTQNRHTIQIEPHDWMAALFDAVAR
FT                   ANVIVLDLDRDIWGYVALGYFKQRLKEGEVGSSTMPHKVNPIDFENSEGNLGLANAVLR
FT                   HLSEKLPVSRWQRDLTDSTVLRNLGVGLGYALVAWDACLRGLNKLEVNAAAIDADIDAC
FT                   WEVLAEPVQTVMRRYGLPQPYEQLKALTRGKGITEEALREFIGGLALPDEPKARLLAMT
FT                   PRSYIGLAAQLARAV"
FT   misc_feature    1838..3085
FT                   /note="HMMPfam hit to PF00206, DE Lyase, score 2.1e-78"
FT   misc_feature    2675..2704
FT                   /note="PS00163 Fumarate lyases signature."
FT   CDS             3226..3684
FT                   /transl_table=11
FT                   /locus_tag="BB1954"
FT                   /product="putative c'cytochrome"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2889"
FT                   /db_xref="GOA:Q7WKZ7"
FT                   /db_xref="HSSP:1E86"
FT                   /db_xref="InterPro:IPR001760"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ7"
FT                   /protein_id="CAE32451.1"
FT                   /translation="MKKLSIVAAVVCTMLAPLWSSPAAAQFAKPQDAIKYRQSALTLMA
FT                   SHFGRMQPVMRGQAPYDAAQIKANVDIFKTLSTLPWAAFGPGTEGGDALPAVWSDAEDF
FT                   KQKQQRLADNVAKLSAAADAGDYDKVRAAFGDVGASCKACHDSFRKKK"
FT   misc_feature    3226..3300
FT                   /note="Signal peptide predicted for BB1954 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.905 between residues 25 and 26"
FT   misc_feature    3316..3678
FT                   /note="HMMPfam hit to PF01322, DE Cytochrome C', score
FT                   2.9e-56"
FT   misc_feature    3556..3606
FT                   /note="PS00238 Visual pigments (opsins) retinal binding
FT                   site."
FT   misc_feature    3646..3663
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT   CDS             complement(3769..4464)
FT                   /transl_table=11
FT                   /locus_tag="BB1955"
FT                   /product="putative integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2888"
FT                   /db_xref="GOA:Q7WKZ6"
FT                   /db_xref="InterPro:IPR011577"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ6"
FT                   /protein_id="CAE32452.1"
FT                   /translation="MQPTATSVRIWDLPTRLFHWAFAAAVIGALVTVKLGGLYMDWHVR
FT                   FGLTALGLVLFRLIWGFVGPRHARFATFVRGPGAMLAYLRGRAADHAGHNPLGALSVLA
FT                   MLAVIGVQAATGLFASDDIMIQGPLYGHVSEATANTLTGLHQANEWIIFGLLGAHLLAI
FT                   AWYSAVRRRALVRAMITGNAPAAQLPPATPASQDGPAIWLRAAVVGACCAALVLWIQAQ
FT                   AVAVDMSFS"
FT   misc_feature    complement(join(3799..3867,3958..4017,4108..4176,
FT                   4270..4338,4348..4416))
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB1955 by TMHMM2.0 at aa 17-39, 43-65, 97-119, 150-169 and
FT                   200-222"
FT   CDS             complement(4526..4807)
FT                   /transl_table=11
FT                   /locus_tag="BB1956"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2887"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ5"
FT                   /protein_id="CAE32453.1"
FT                   /translation="MNQLFDTNHLIRRPAQTKLDDTPIHVGDVVHLQLADGPVIRARVI
FT                   YNAPINGTTTYTTELIRCAGDDKASHGQRIRFRHEHVHRIESVRGLTH"
FT   CDS             5319..6122
FT                   /transl_table=11
FT                   /locus_tag="BB1957"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2886"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ4"
FT                   /protein_id="CAE32454.1"
FT                   /translation="MATKCLLQGSFPDASPIMPAMRSGAAWVLEGRFMRFGWGLPALAV
FT                   VLALAGCVNREPEERAAFIAYLEQVAAPQAGVVAAPPDPPTRKALGDYEAQYEPMEAAH
FT                   AAVREALAAQQAALQALRLHSVDEIVARQDGWDRLAERLAAARTGLEQARAAADAARAG
FT                   MEQPPDLRNAYARAYEHSVTAPAQALARISGLLEPAVEDARRVAGFVARHRDQVDTDGP
FT                   LTQVRDPSVRSELNVLLQALNGRSDQVSQAQALLNGLAGPAREAP"
FT   misc_feature    5442..5474
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             6167..7243
FT                   /transl_table=11
FT                   /locus_tag="BB1958"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2885"
FT                   /db_xref="InterPro:IPR002549"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ3"
FT                   /protein_id="CAE32455.1"
FT                   /translation="MSQSSLFNSRAFVGLLIVVTIAFAWLLWPFYGAVFWGAILAIIFA
FT                   PVHRRIAVRLAPRRNLAALLTLLMVLLVVIIPLIFITGSLVQEGANLYQRLKSGNLNFG
FT                   AYLQQAIDALPPTVHDVLARFDLADLGSIQEKLTAGMMQASQFIATQAFNIGQDTFQFL
FT                   IGFGVMLYLLFFLLRDGSQLSRRLRRAVPLDEHHKQHLFRKFTTVIRATVKGNIAVAAA
FT                   QGALGGVMFSVLGIQGALLWGVIMAFLSLLPAIGAGLIWAPVAVYFLLTGAIWQGVVLI
FT                   LFGVLVIGMVDNVLRPLLVGKDTKLPDYVVLISTLGGMALFGLNGFVIGPLIAALFVAC
FT                   WDLFSPPDDTAGDGAARP"
FT   misc_feature    6167..6238
FT                   /note="Signal peptide predicted for BB1958 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.938) with cleavage site
FT                   probability 0.633 between residues 24 and 25"
FT   misc_feature    join(6185..6244,6254..6310,6347..6415,6644..6697,
FT                   6803..6871,6881..6949,6968..7036,7094..7162)
FT                   /note="8 probable transmembrane helices predicted for
FT                   BB1958 by TMHMM2.0 at aa 7-26, 30-48, 61-83, 160-177,
FT                   213-235, 239-261, 268-290 and 310-332"
FT   misc_feature    6206..7201
FT                   /note="HMMPfam hit to PF01594, DE Domain of unknown
FT                   function DUF20, score 5.1e-48"
FT   CDS             7325..7972
FT                   /transl_table=11
FT                   /locus_tag="BB1959"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3506"
FT                   /db_xref="GOA:Q7WKZ2"
FT                   /db_xref="HSSP:1IM5"
FT                   /db_xref="InterPro:IPR000868"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ2"
FT                   /protein_id="CAE32456.1"
FT                   /translation="MKLPVDGLIASFDVDAQKSFTPLCPDELPVPDGHAIVPELNAQAA
FT                   HADLRLGSKDAHSPHAIWRATADQPMFSPVAGANVDVRWNMHCVPGTRGFELLDGLPAP
FT                   AAYDFFVWKGVEPDMHPYGSCYHDLAERQPTGVIEFLRARDVRCVLVGGLALDYCVKVT
FT                   ALQLRRAGLEVVVNLAACRGIAAATCEQARRELSQAGVRTVPHAGVLVRAGR"
FT   CDS             complement(7987..9414)
FT                   /transl_table=11
FT                   /locus_tag="BB1960"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3507"
FT                   /db_xref="GOA:Q7WKZ1"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ1"
FT                   /protein_id="CAE32457.1"
FT                   /translation="MKPSPEILALRWKDTCAHYSPHEWAAARNVVTANKAALADYFYEC
FT                   MLADPNAAFFLSDQLVKTKLHASMQDWLESVYAAAPTEEYERTVAFQRKVGEVHARIDI
FT                   PVHLVMRGACALIRRICELLDRDASLSAAQAAATCRYVADVTMTAVEMMCHAYSVSHDR
FT                   NARAEEGYRLLALSQNVGAERERQRAALLDWENQLMFGLSVGKPWDELPPIRKSEFGLW
FT                   FIHKAAHAFEGAAESRSVSSQLQHIDQLLADAQQTQPPPDQRLAILHSVRDATKAIGFL
FT                   IDGLFEQAGNLESGRDTLTRLLNRKYLHVVLSKEVAYARKTGVPLSVLVADIDYFKSIN
FT                   DAHGHDAGDFVLQQVASLIASYSRGGDYTFRLGGEEFLVVLVDADGTQALNVAEALRRR
FT                   IQEKATVLPDGGEVRLTLSIGVAAHDRHPDYQRLLKRADQALYAAKSGGRNRCVLANAG
FT                   PAEPSQRPDAVAQSGQH"
FT   misc_feature    complement(8062..8541)
FT                   /note="HMMPfam hit to PF00990, DE GGDEF domain, score
FT                   3.1e-54"
FT   CDS             complement(9580..10185)
FT                   /transl_table=11
FT                   /locus_tag="BB1961"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3508"
FT                   /db_xref="GOA:Q7WKZ0"
FT                   /db_xref="InterPro:IPR006674"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKZ0"
FT                   /protein_id="CAE32458.1"
FT                   /translation="MQTESLPRSEADTRACRALAAALRARDPSTAIHSGRVAALAGELG
FT                   RAYGLDGMAIRRLELGASLHDIGKLGVADRVLHHPGRLLGEDWTHMQEHSVLGERIIAA
FT                   TGLDDGAAIGRIVRHHHEHYDGSGYPDGLAGEAIPLEARLIALVDAYDAITAHRPYRPP
FT                   VPHDRTMAMLEAEQGARTDPQAFTIFARMIERSQWRAG"
FT   misc_feature    complement(9724..10023)
FT                   /note="HMMPfam hit to PF01966, DE HD domain, score 5.3e-08"
FT   CDS             10221..10544
FT                   /transl_table=11
FT                   /locus_tag="BB1962"
FT                   /product="Hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3509"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY9"
FT                   /protein_id="CAE32459.1"
FT                   /translation="MAKLTAKAASVPANGAPAAAVDWRSLLEFHSWRCPGRAVLTMQTD
FT                   VNINSLAALGLMEEIFANYHAYRVAKQAGDTGEMALRRAKIETLAAEQRRVIAAVCRDT
FT                   GAQ"
FT   misc_feature    10221..10280
FT                   /note="Signal peptide predicted for BB1962 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.810) with cleavage site
FT                   probability 0.657 between residues 20 and 21"
FT   CDS             complement(10566..10832)
FT                   /transl_table=11
FT                   /locus_tag="BB1963"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3511"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY8"
FT                   /protein_id="CAE32460.1"
FT                   /translation="MENQEIMVAFAQAIQQVTAKVSALETTVQCLIAAQPAEQREQFGA
FT                   ALRQAASGLLAESDQRPLTGSALSHLKLAIDAYLEAAGQHPLQ"
FT   CDS             11162..11398
FT                   /transl_table=11
FT                   /locus_tag="BB1964"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3512"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY7"
FT                   /protein_id="CAE32461.1"
FT                   /translation="MASESRGREAETMSEPAIAWRRVDDYCWVGPPGWTICRVWLDGSY
FT                   QYELWFSRGDAGTIYGMRASLEGAQHLYMQKLG"
FT   CDS             11415..11672
FT                   /transl_table=11
FT                   /locus_tag="BB1965"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3513"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY6"
FT                   /protein_id="CAE32462.1"
FT                   /translation="MPGRGKIDAERRCGLMKTEQKRGFLDRFFPAGIRPACPKCGHQGF
FT                   IVLHDDAVVNADKPIAIVACASEDCHAALGVLPASAVWDE"
FT   tRNA            complement(11777..11853)
FT                   /note="tRNA Met anticodon CAT, Cove score 81.73"
FT   CDS             complement(11944..13269)
FT                   /transl_table=11
FT                   /locus_tag="BB1966"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3514"
FT                   /db_xref="InterPro:IPR005532"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY5"
FT                   /protein_id="CAE32463.1"
FT                   /translation="MRQGASMESSACLLTRPGPPEPAPHPTGRYARIRAQSAALAEPLS
FT                   PEDCQAQSMPDCSPVKWHLAHTTWFFETFVIGRFEPGRRPFDPQYRMLFNSYYNAVGAR
FT                   HPRPQRGLLTRPSLHEVLRYRAHVDQAMETLCARLAGVDSDFDALVELGLNHEQQHQEL
FT                   ILTDLKHLFSCNPLRPAYAPPGIPALPAGTPAGWTRYDGGIVGIGHAGEGFAFDNETPA
FT                   HEVLLRPFHLADRPVTQGEYLAFIQDGGYRRPELWLSLGWDQACQQNWRAPLYWEGQKD
FT                   EWRVFTLHGLHALEPHAPVTHVSYYEADAYARWARVRLPREAEWELAARAPGASADAPA
FT                   NLLESGHLDPRPAPRRAAAGVPVQLYGDVWEWTCSAYDAYPGFTPPAGAVGEYNGKFMC
FT                   NQYVLRGGSCATPREHIRATYRNFFPPEARWQFSGIRLARDA"
FT   misc_feature    complement(11953..12693)
FT                   /note="HMMPfam hit to PF03781, DE Domain of unknown
FT                   function (DUF323), score 6e-28"
FT   CDS             complement(13291..14265)
FT                   /transl_table=11
FT                   /locus_tag="BB1967"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3515"
FT                   /db_xref="InterPro:IPR019257"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY4"
FT                   /protein_id="CAE32464.1"
FT                   /translation="MAHTPTMLAAAAPFMPEATGVDPALDALLAGLQAHPARIDPKYLY
FT                   DALGSSLFAAITQLPEYYPTRCEAEIFATHLEAIARHTGPVRTLIDLGAGDCAKAERLL
FT                   PCLRPQRYVPIDISTDFLGQAVARVRRAHPWLDVLPLGRDLNAGLDLPEAIDAQGRLFF
FT                   YPGSSIGNLDPDAALALLASLRAQAGVSGGLLIGVDRVKARAIVEPAYDDALHLTGAFN
FT                   LNLLRHVNSVLGSDFDVRDWTHVALYNEPRSRMEMHLQARSDIRVRWPGGQRRFQADER
FT                   IHTENSYKYTIERFVDLLRRAGYGDIRHWSDARDWFSVFSARA"
FT   misc_feature    complement(14206..14265)
FT                   /note="Signal peptide predicted for BB1967 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.826) with cleavage site
FT                   probability 0.787 between residues 20 and 21"
FT   CDS             14597..15196
FT                   /transl_table=11
FT                   /locus_tag="BB1968"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3517"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY3"
FT                   /protein_id="CAE32465.1"
FT                   /translation="MSSIVVARFDSVPSARSAAHALVGDGFREEAISILYGDPDRTGRR
FT                   MGRPAWRFGPDLRTRAARWRAIVSAAALAAIGTLGGVIVPVLTGYGRVGMVVGAALGAY
FT                   AGALAGACWMASGLRRARAEAAYAGQLARDRVVLLAVQVHPDDEEAAAALLRDAGGLQV
FT                   EKARSRWWPGARGQSTPTGWRTRAPRPPAQRTQWQP"
FT   misc_feature    join(14792..14860,14873..14941)
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB1968 by TMHMM2.0 at aa 66-88 and 93-115"
FT   CDS             15184..16614
FT                   /transl_table=11
FT                   /locus_tag="BB1969"
FT                   /product="putative phospholipase D family protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3518"
FT                   /db_xref="GOA:Q7WKY2"
FT                   /db_xref="InterPro:IPR001736"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY2"
FT                   /protein_id="CAE32466.1"
FT                   /translation="MATLRRGFACRLARQVAVMFMLAALGACATVPGMQGLRERRAQAG
FT                   LSTDYGWQSLQRSHTIVADATGGDGDDAMARHLAVEAAISGAPLVAGNQVRLLADGPAT
FT                   YRSMLDAIAQARRYIHMETYIFEDDEAGQRFADALMAARQRGVEVAVMVDAVGTLNTPR
FT                   QWFERLKQGGIKVAVFNPVNPARAGLGWAPNQRNHRKLLVVDGQVGFLGGLNISSVYSS
FT                   GSRSGSGSGRAAQAPGPAASRADTAPWRDTHIAVRGPAVAEIERVIQDGWLRQTGAPLG
FT                   GGAVRLSVPAPGDLHVRILANEPNERDGYTVYLTLMSAFESARQSIHITMAYFVPDPAF
FT                   VRVLADAARRGVDVALVLPGFSDSSLVWYAGRSHYQALLDAGVKLYERRDALLHAKTAV
FT                   VDGVWSTVGSSNMDWRSFALNYELNAVIVGARFGAEMEALFERDRAAAVPIDPRNWADR
FT                   GADDRFMEAFSRLFERWL"
FT   misc_feature    15190..15270
FT                   /note="Signal peptide predicted for BB1969 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.885) with cleavage site
FT                   probability 0.558 between residues 27 and 28"
FT   misc_feature    15235..15267
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    15760..15843
FT                   /note="HMMPfam hit to PF00614, DE Phospholipase D. Active
FT                   site motif, score 0.00039"
FT   misc_feature    16348..16431
FT                   /note="HMMPfam hit to PF00614, DE Phospholipase D. Active
FT                   site motif, score 0.001"
FT   CDS             complement(16624..18285)
FT                   /transl_table=11
FT                   /locus_tag="BB1970"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3521"
FT                   /db_xref="GOA:Q7WKY1"
FT                   /db_xref="InterPro:IPR002932"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY1"
FT                   /protein_id="CAE32467.1"
FT                   /translation="MNWIAGRYTTFALMLIGAALTSALAVHSSRAWLWAAVPFVLLSLL
FT                   GVYDLLQTRHAIRRNYPVLGNLRFLFEFIRPEIRQYFLEDDTHASPFSRAQRSIVYQRA
FT                   KQDIDKRPFGTQEDVYGDRYEWINHSMTPAHVADADFRVTVGGPECRQPYSMSAFNISA
FT                   MSFGALSANAVLALNEGARIGDFAHDTGEGGISRYHRERGGSLVWNIGSGYFGCRDAHG
FT                   AFSEEAFVKNACTPQVKMIEIKLSQGAKPGHGGILPAGKVTPEIAEARGVPAWQDCNSP
FT                   SSHSAFDSPVGLLHFVARLRELSGGKPVGFKFCVGHPWEWFAIVKAMLQTNITPDFIVV
FT                   DGAEGGTGAAPVEFVDHVGTPLREALRLVHNTLIGMNLRDRIKLGASGKIITAFDMARA
FT                   MAMGADWCNAARGFMFAIGCIQAQACHTGKCPTGVTTQDPLRQRALVVPDKAQRVANFH
FT                   GNTLHALAELLGAAGLTHPGQLRPHHIARRISSSEVRLLSALFPELAPGELLRGEFRHH
FT                   VFQVGWGMAQADSFQPAMDISAALAALRPAGAPAHA"
FT   misc_feature    complement(16861..17982)
FT                   /note="HMMPfam hit to PF01645, DE Conserved region in
FT                   glutamate synthase, score 2.4e-77"
FT   misc_feature    complement(join(18127..18195,18208..18276))
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB1970 by TMHMM2.0 at aa 4-26 and 31-53"
FT   misc_feature    complement(18202..18285)
FT                   /note="Signal peptide predicted for BB1970 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.996) with cleavage site
FT                   probability 0.696 between residues 28 and 29"
FT   CDS             complement(18360..19667)
FT                   /transl_table=11
FT                   /locus_tag="BB1971"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3522"
FT                   /db_xref="InterPro:IPR007272"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKY0"
FT                   /protein_id="CAE32468.1"
FT                   /translation="MPPVLYCNDPGRASALSLFLHPLRDVIMSINTSTLDLPSALPPIR
FT                   INHKPLWAALLLVLAGAAYLLQSVGWRQSALWVVGALLGVTLYHASFGFTQAWRVFVSD
FT                   RRGAGLRAQMVMLAVGVLLFFPFLAQGTLWGQPVSGFVSPPGVSVVLGAFLFGIGMQLG
FT                   GGCASGTLFAVGGGNTRMLVTLLFFIVGSVIATANFGWWSALPALPPTSLIKSWGLPGA
FT                   LLANLAVFALIAWTTTVLEKRRHGQLISHAARTSRTPSLLQGPWPMVWGGIALVVLNFA
FT                   TLALAGRPWGITSAFALWGAKALDALGADVASWAYWSRQQAALAAPVRQDITSVMDIGL
FT                   MLGALAAASAAGKFAPVWKVPARSLLAAVVGGLLLGYGARLAFGCNIGAYFSGILSGSL
FT                   HAWLWLPAAFLGSALGVRLRPWFGLAVEKTPAASSC"
FT   misc_feature    complement(join(18420..18488,18516..18575,18594..18662,
FT                   18819..18887,18948..19016,19059..19127,19146..19214,
FT                   19257..19325,19386..19445,19458..19517))
FT                   /note="10 probable transmembrane helices predicted for
FT                   BB1971 by TMHMM2.0 at aa 51-70, 75-94, 115-137, 152-174,
FT                   181-203, 218-240, 261-283, 336-358, 365-384 and 394-416"
FT   CDS             complement(19728..20675)
FT                   /transl_table=11
FT                   /locus_tag="BB1972"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3523"
FT                   /db_xref="GOA:Q7WKX9"
FT                   /db_xref="InterPro:IPR004776"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX9"
FT                   /protein_id="CAE32469.1"
FT                   /translation="MQAVLTAALPVFALILTGWLAARWRVLGPSATDALNRYVVYLSLP
FT                   ALLFRAMAQADLRQLADYWGFTAAVAGGIALTFGAAILACRRDGARLTDLSLEGLATSY
FT                   GNAGYMGIPLCLALLGPASLAPAIITTLLTACVLFGVAIALIEFDQHRDRHWSATLLKV
FT                   ARALLRNPLLAAPLLGLACAAAGITLPAGLDNYAALLGASASPCALVTIGLFLAQSQPG
FT                   GDRGTVGLMVGGKLLLHPAVTAVLAFAVFDMPPLWAWCAVLMAALPIGTGPFMLAQLYG
FT                   RDARPSSRAILLSTVLSVPTITALVAWIGRQPLG"
FT   misc_feature    complement(join(19749..19808,19845..19913,19923..19991,
FT                   20025..20084,20112..20180,20238..20306,20319..20387,
FT                   20421..20489,20517..20576,20595..20663))
FT                   /note="10 probable transmembrane helices predicted for
FT                   BB1972 by TMHMM2.0 at aa 5-27, 34-53, 63-85, 97-119,
FT                   124-146, 166-188, 198-217, 229-251, 255-277 and 290-309"
FT   misc_feature    complement(20238..20633)
FT                   /note="HMMPfam hit to PF03547, DE Auxin Efflux Carrier,
FT                   score 3.4e-12"
FT   CDS             20800..21243
FT                   /transl_table=11
FT                   /locus_tag="BB1973"
FT                   /product="putative acetyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3524"
FT                   /db_xref="GOA:Q7WKX8"
FT                   /db_xref="HSSP:1Q2Y"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX8"
FT                   /protein_id="CAE32470.1"
FT                   /translation="MPQTAAPLRIVLGTWDRLREDATTVRFEVFVAEQRVPEDIELDDF
FT                   DPLSVHAVAYGADGAPLGTGRLLPDGHIGRMAVRKRARGLGVGGRILDALIEQGHGDGH
FT                   RMLVLHAQSHARGFYEAHGFQAEGDEFVEAGIAHVAMTRELAR"
FT   misc_feature    20956..21174
FT                   /note="HMMPfam hit to PF00583, DE Acetyltransferase (GNAT)
FT                   family, score 1.7e-12"
FT   tRNA            complement(21337..21421)
FT                   /note="tRNA Leu anticodon CAG, Cove score 75.85"
FT   CDS             21583..22194
FT                   /transl_table=11
FT                   /locus_tag="BB1974"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3525"
FT                   /db_xref="InterPro:IPR005636"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX7"
FT                   /protein_id="CAE32471.1"
FT                   /translation="MSRPVCARCARPRSHCLCALIPALSCRTRVLFLQHPAEARHALNT
FT                   ARLAALGLRQAELHVGERFDPALWRRPGMRSWLLFPGEAAREPGPVGEGGPLLLVVPDG
FT                   SWRQARGLVAGNPDLASLPRLALPADGVSAYRVRHADLPGALSTIEAVVQVLNALEAPA
FT                   RFDALLAPFHALVQGQVRAMGDEVYQRHHVRRAGRRGKSG"
FT   misc_feature    21586..22152
FT                   /note="HMMPfam hit to PF03942, DE DTW domain, score
FT                   1.1e-54"
FT   tRNA            complement(22282..22366)
FT                   /note="tRNA Leu anticodon CAG, Cove score 75.85"
FT   CDS             22756..25176
FT                   /transl_table=11
FT                   /gene="rnr"
FT                   /gene_synonym="vacB"
FT                   /locus_tag="BB1975"
FT                   /product="putative ribonuclease R"
FT                   /EC_number="3.1.-.-"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3526"
FT                   /db_xref="GOA:Q7WKX6"
FT                   /db_xref="InterPro:IPR003029"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX6"
FT                   /protein_id="CAE32472.1"
FT                   /translation="MPADFDPDVPSREAILTALRSAGAPLSPAELAERMGVERPATLVG
FT                   FERRLGAMERDGQLLPNRKGVLLLATKLDFVAGRVQGHRDGFGFLVRDDGGPDIFLSPR
FT                   EMLKVLHGDRVLVKPSGEYRGKPEGAIVEVIERRTNKLVGRFLHEHGLSIVVPEDQRIK
FT                   HDILIPPSDTNGAQHGQVVSVQIMEQPTRHTQPLGRVYEVLGEIDDPGMEIEIAVRKFD
FT                   VPVDFSEPANKQAARLPDSVRKTDLKQRVDLRDVPLITIDGEDARDFDDAVYCEPVELG
FT                   TGQRKRPAWRLLVAIADVSNYVRPNDALDDDAYERGTSVYFPRRVIPMLPEVLSNGLCS
FT                   LNPNVDRLVLVCDMVIPATGAKAGTVTAYQFYNAVMHSHARTTYTSIWEALQQPGGPAA
FT                   AALGAIMPHVRHLHELYQLLSQQRRKRGAIDFDTVETRIVCNELGRIEQIVPMVRNDAH
FT                   KLIEECMLAANTCAADFMSRSKHPGLYRIHEGPTPERLQSLRDFLRTMGLSLGGGDEPT
FT                   AKDYGEFLDSVRGRPDYPLLQTMCLRSMQQAIYSPDNLGHFGLAYPAYTHFTSPIRRYP
FT                   DLLTHRVIKALLEGQRYMPELEDQPIVIGRSQREHEHAVWEKLGLILSGSERRADEASR
FT                   DVEAWLKCWFVKERVGEDFSGTVTGVASFGIFVTLDTLHVEGLVHVSELGGEYFQFNDA
FT                   LHELRGERTGMRYRLTDKVQVQVSRVDLEARRIEFRLVKGTSFDALRKAAARGPDEGRR
FT                   VKKAAAPKPAALKGQTAKQRRAEAKQASKPANTPKAAKSAGASAQKKPARARH"
FT   misc_feature    22831..22896
FT                   /note="Predicted helix-turn-helix motif with score 979.000,
FT                   SD 2.52 at aa 26-47, sequence LSPAELAERMGVERPATLVGFE"
FT   misc_feature    23269..24411
FT                   /note="HMMPfam hit to PF00773, DE RNB-like protein, score
FT                   1.2e-118"
FT   misc_feature    24424..24498
FT                   /note="PS01175 Ribonuclease II family signature."
FT   misc_feature    24694..24951
FT                   /note="HMMPfam hit to PF00575, DE S1 RNA binding domain,
FT                   score 7.1e-10"
FT   CDS             25301..26038
FT                   /transl_table=11
FT                   /locus_tag="BB1976"
FT                   /product="putative tRNA/rRNA methyltransferase"
FT                   /EC_number="2.1.1.-"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3527"
FT                   /db_xref="GOA:Q7WKX5"
FT                   /db_xref="InterPro:IPR013123"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKX5"
FT                   /protein_id="CAE32473.1"
FT                   /translation="MASTQVLAGFHAVVARLRHAPESIKEIYVEASRRDKRMQTFLEQA
FT                   ERAGRRVHPVAAERLDGLARGTRHQGVVAVAEERSLAVGIDEVLDVIEGPALLLILDGV
FT                   TDPHNLGACLRTADAAGVHAVIAPRDRAVGLNATVQRVACGAADTVPYLTVTNLARTMR
FT                   ELKERDVWLVGTDDQAGESMHQVDARRSMAWVMGAEGEGMRRLTRETCDQLVRIPMLGS
FT                   VESLNVSVASAVCLYESVRQRQG"
FT   misc_feature    25586..26011
FT                   /note="HMMPfam hit to PF00588, DE SpoU rRNA Methylase
FT                   family, score 7.7e-55"
FT   CDS             26092..27336
FT                   /transl_table=11
FT                   /locus_tag="BB1977"
FT                   /product="Cys/Met metabolism PLP-dependent enzyme"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3528"
FT                   /db_xref="GOA:Q7WKX4"
FT                   /db_xref="HSSP:1GC0"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX4"
FT                   /protein_id="CAE32474.1"
FT                   /translation="MHQNGFTTTIVHSDRDQSAEHGAVHKPMHPSSEYVYEDARELAAV
FT                   FQGKAGFTYARQGTPTTTALEARITRMEAGKSTVSFATGMAALAAIFTTLLRRGDHLVS
FT                   SQYVFGNTNSLLNTLMELGVEVTMVDATDVRQVRDALRPNTRMVFTETIANPGTQVADL
FT                   AGMGALCRERGLVYVVDNTLTSPWMFRPVEVGASLVMNSLSKYIAGHGHALGGAVTDTG
FT                   LYDWSGYANIYESYRKGAPTGWGLTQIKKKGLRDMGGTLAAEPAHRIAIGTETLALRMA
FT                   RHCSNALALATFLQGHPGVARVHYPGLSSHAQHQRASELFDGRYGGLLGVELAEGIDCF
FT                   DFLNRLRIVLMATHLGDTRSLALPAAHTIYYEMGAEKRAQMGIADSLIRVSVGIEDEAD
FT                   LLFDFDQALRGCLQS"
FT   misc_feature    26110..27318
FT                   /note="HMMPfam hit to PF01053, DE Cys/Met metabolism
FT                   PLP-dependent enzyme, score 5.8e-105"
FT   CDS             27377..28057
FT                   /transl_table=11
FT                   /locus_tag="BB1978"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3529"
FT                   /db_xref="GOA:P0A3X3"
FT                   /db_xref="InterPro:IPR006620"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A3X3"
FT                   /protein_id="CAE32475.1"
FT                   /translation="MLIQIADLFTPAEAAQIRARLEAADWVDGKVTAGYQSAQVKHNRQ
FT                   LSEQHPLAQELGGLILQRLAANNLFMSAALPRKIFPPLFNRYEGGEAFGYHVDNALRPV
FT                   PGTAERVRTDLSATLFFSEPDSYDGGELVVDDTYGPRTVKLPAGHMVLYPGTSLHKVTP
FT                   VTRGARISAFFWLQSLVREDSQRSLLLEMDVAIQRLNQDTPGHASIVQLTGVYHNLLRR
FT                   WTDV"
FT   misc_feature    27608..27910
FT                   /note="HMMPfam hit to PF03171, DE 2OG-Fe(II) oxygenase
FT                   superfamily, score 2.3e-11"
FT   misc_feature    27806..27940
FT                   /note="PS00041 Bacterial regulatory proteins, araC family
FT                   signature."
FT   CDS             28378..28650
FT                   /transl_table=11
FT                   /gene="hupB"
FT                   /gene_synonym="hopd"
FT                   /locus_tag="BB1979"
FT                   /product="DNA-binding protein Hu-beta"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3530"
FT                   /db_xref="GOA:Q9R336"
FT                   /db_xref="HSSP:1B8Z"
FT                   /db_xref="InterPro:IPR000119"
FT                   /db_xref="UniProtKB/TrEMBL:Q9R336"
FT                   /protein_id="CAE32476.1"
FT                   /translation="MNKTELIDHIASKADISKAAAGRSLDALIGAVKTTLKKGGTVTLV
FT                   GFGTFAVSARAARTGRNPRTGETIKIKKAKVPKFRPGKALKDAVN"
FT   misc_feature    28378..28644
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00216, DE Bacterial DNA-binding
FT                   protein, score 4.1e-47"
FT   misc_feature    28513..28572
FT                   /note="PS00045 Bacterial histone-like DNA-binding proteins
FT                   signature."
FT   tRNA            28759..28834
FT                   /note="tRNA Val anticodon TAC, Cove score 92.08"
FT   CDS             29147..29953
FT                   /transl_table=11
FT                   /gene="tonB"
FT                   /locus_tag="BB1980"
FT                   /product="siderophore-mediated iron transport protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3531"
FT                   /db_xref="GOA:Q7WKX3"
FT                   /db_xref="InterPro:IPR006260"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX3"
FT                   /protein_id="CAE32477.1"
FT                   /translation="MPSPQSGRSFSSHTSLALRAGAGFTVLALHAAVIGAVFLSKTERP
FT                   ELLEPEAVMVSIIEAPLPQLAQAEPTPEPPTPVEETPPEPEPEPVIEPEPEPEPEPVVE
FT                   PEPEPEPVVEKPPEPAPKPKPKPKPKPKPKPQPKPEVPPEPKKIETPPAGAPQGAQQVT
FT                   QAPRQAPPPDEPIMVSSVEYQGARPMPVYPMASKRLREEGRVVVLVEISTQGLVDRASI
FT                   DTSSGFSRLDESALAAARKARFKPLTRNGVAYPAKAKLPFDFVMRN"
FT   misc_feature    29147..29239
FT                   /note="Signal peptide predicted for BB1980 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.918) with cleavage site
FT                   probability 0.882 between residues 31 and 32"
FT   misc_feature    29189..29257
FT                   /note="1 probable transmembrane helix predicted for BB1980
FT                   by TMHMM2.0 at aa 15-37"
FT   misc_feature    29711..29815
FT                   /note="HMMPfam hit to PF03544, DE Gram-negative bacterial
FT                   tonB protein, score 1.7e-11"
FT   CDS             29955..30932
FT                   /transl_table=11
FT                   /gene="exbB"
FT                   /locus_tag="BB1981"
FT                   /product="MotA/TolQ/ExbB proton channel family protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3532"
FT                   /db_xref="GOA:Q7WKX2"
FT                   /db_xref="InterPro:IPR002898"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX2"
FT                   /protein_id="CAE32478.1"
FT                   /translation="MSNAINTATLVAQAATPSAAATPDAPAAAPLAQQAGEAAGAAAQT
FT                   GAEALNQAAQAGTEAVNQAAQALSAAAPAVPPAPLATPDMGFLHFVAQSDFVGKTLFII
FT                   LIVMSLVTWYLIVVKAVGNMGMRKRAAHFLNKFWNASSLEQVENEIVTHGARDPFSHLA
FT                   SHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVIDEETAKLENGLTVLASVGSTAPF
FT                   VGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMTGLGLAVAIPAVLAYNAFVRN
FT                   NRVFLSRLDAFAHDLFAFLTTGQQVAVSDGKVRALRRQHGRGGE"
FT   misc_feature    29955..30014
FT                   /note="Signal peptide predicted for BB1981 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.995) with cleavage site
FT                   probability 0.691 between residues 20 and 21"
FT   misc_feature    join(30240..30308,30612..30680,30723..30791)
FT                   /note="3 probable transmembrane helices predicted for
FT                   BB1981 by TMHMM2.0 at aa 96-118, 220-242 and 257-279"
FT   misc_feature    30420..30836
FT                   /note="HMMPfam hit to PF01618, DE MotA/TolQ/ExbB proton
FT                   channel family, score 6.7e-63"
FT   CDS             30932..31399
FT                   /transl_table=11
FT                   /gene="exbD"
FT                   /locus_tag="BB1982"
FT                   /product="biopolymer transport protein ExbD/TolR"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3533"
FT                   /db_xref="GOA:Q7WKX1"
FT                   /db_xref="InterPro:IPR003400"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX1"
FT                   /protein_id="CAE32479.1"
FT                   /translation="MAFGSFDNKGSGSHTVSEINMVPLIDVMLVLLVIFIITAPLLAHS
FT                   IRINIPQVSAEQIEEEPKTIDLAIDANGALFWDEKPVSIDDLPNRFKAIAGDKPQAEIR
FT                   IRADQATRYETLAQVMASARRSGMTRIGFITSPAPQGAPGEAGASAAPAAP"
FT   misc_feature    30968..31345
FT                   /note="HMMPfam hit to PF02472, DE Biopolymer transport
FT                   protein ExbD/TolR, score 2.2e-19"
FT   misc_feature    30989..31057
FT                   /note="1 probable transmembrane helix predicted for BB1982
FT                   by TMHMM2.0 at aa 20-42"
FT   CDS             31482..32153
FT                   /transl_table=11
FT                   /gene="basR"
FT                   /locus_tag="BB1983"
FT                   /product="response regulator protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3534"
FT                   /db_xref="GOA:Q7WKX0"
FT                   /db_xref="HSSP:1KRW"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKX0"
FT                   /protein_id="CAE32480.1"
FT                   /translation="MRVLVIEDDTTLGHALQEFLADQGYAVDWLTEGDKVLGALAGQPY
FT                   DLLLLDLNLPGMSGLDVLRQLRQDGNQVPVLILTARDGLDDRVAGLDAGADDYVTKPFD
FT                   LPELAARVRALGRRRSGQAQPQIEVGPLVFDTVGREVRANGTRLALSVRELSVLEMLMA
FT                   RSGRVVTKRQIVNSLSAWDADFSENAVEVYVYRLRKRLEGSGASIQTVRGFGYMLDVEA
FT                   A"
FT   misc_feature    31482..31841
FT                   /note="HMMPfam hit to PF00072, DE Response regulator
FT                   receiver domain, score 1.1e-40"
FT   misc_feature    31917..32126
FT                   /note="HMMPfam hit to PF00486, DE Transcriptional
FT                   regulatory protein, C terminal, score 4.5e-17"
FT   CDS             32212..33330
FT                   /transl_table=11
FT                   /locus_tag="BB1984"
FT                   /product="sensor kinase protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3535"
FT                   /db_xref="GOA:Q7WKW9"
FT                   /db_xref="HSSP:1BXD"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKW9"
FT                   /protein_id="CAE32481.1"
FT                   /translation="MNSLPPTPPPPDPVGWKLPRGSLARHLVLRLMPPVLLLVLLDLAA
FT                   TWVITHKIDMSIWMLEDFFWLMVVGQIVLIALFTGVIIRGVRSGLRSVNHLAEEIRQRS
FT                   IDDMQPMEVAGLPAEIAPLVTHINDLLGRLDASLAAQRRFIGHAAHQLRTPLSGLRLES
FT                   ELMLARPLPEDVRMRAERIKAVSDRMIRLGQQLLVMARADPDARPQDRFIRLDLCEWVR
FT                   ASGAEWIPRVRAAQAEIDLVAPEQPVWIDGDPLLLDEMLGNLIDNALRYGKPRGRICLT
FT                   IGVNPPALIIEDDGPGISPQERDSVFEAFYRAPDAKAGGSGLGLAIVREIAHAHGAWWK
FT                   LSSRPEYAGTRLSVVFPGPRIGTQLTRQERAS"
FT   misc_feature    join(32290..32358,32401..32469)
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB1984 by TMHMM2.0 at aa 27-49 and 64-86"
FT   misc_feature    32413..32619
FT                   /note="HMMPfam hit to PF00672, DE HAMP domain, score
FT                   0.0011"
FT   misc_feature    32629..32826
FT                   /note="HMMPfam hit to PF00512, DE His Kinase A
FT                   (phosphoacceptor) domain, score 1.6e-11"
FT   misc_feature    32965..33288
FT                   /note="HMMPfam hit to PF02518, DE Histidine kinase-, DNA
FT                   gyrase B-, and HSP90-like ATPase, score 4.3e-27"
FT   CDS             33327..35237
FT                   /transl_table=11
FT                   /gene="kup"
FT                   /gene_synonym="trkD"
FT                   /locus_tag="BB1985"
FT                   /product="putative potassium uptake protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3536"
FT                   /db_xref="GOA:Q7WKW8"
FT                   /db_xref="InterPro:IPR003855"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKW8"
FT                   /protein_id="CAE32482.1"
FT                   /translation="MTHTAAGAPRDAKTAIHAPSSRMALMLGALGVVYGDIGTSPLYTL
FT                   RACLNTIDDLQPAHVLGVLSILFWLLMIVVSLKYVTLVLRADNRGEGGTLALLELAVRG
FT                   REGRARWLLIVLGIFGAALFYGDSMITPAISVLSALEGISIVSHTLEPWVVPVALVVLV
FT                   ALFAIQSHGTGAVGKLFGPIMALWFATLAVLGGYQIWLTPEVLAALNPVWALRFIAEFP
FT                   VMSFLLLGAVVLALTGAEALYADMGHFGRPAIRRAWFAMVLPALTLCYFGQGALLLRDP
FT                   AAIRNPFFLMAPEWGLAALVGLATVATVVASQAVISGAFSVTRQAVQLGFWPRMQILHT
FT                   SAVEKGQIYLPQVNALLLCAVLVLVLLFRNSENLAAAYGFAVTGTMLTTSVLAFAVLPR
FT                   DSTGGKRVLWMVLLGALLVIDILLFGANIFKIHEGGWLPLLVGVVVFTLMMTWRRGRRL
FT                   LADMQARDRQPLREFMTQLEAFPPARVQGTAIFMTMNAGNVPPALLHNLKHNKVLHDHV
FT                   LFLSIRVADVPYVSEDERFEMHKISASSWQASINYGFKEDPDVPDALRQVAEAYPEIDL
FT                   EPMRTSFYLSRQTVVAARRPAMARWRRALFAFMARNSTRSTRFFKIPPNRVVEMGMQVE
FT                   L"
FT   misc_feature    join(33387..33455,33498..33566,33660..33728,33756..33824,
FT                   33861..33929,33987..34055,34092..34160,34368..34430,
FT                   34449..34517,34545..34613,34626..34682)
FT                   /note="11 probable transmembrane helices predicted for
FT                   BB1985 by TMHMM2.0 at aa 21-43, 58-80, 112-134, 144-166,
FT                   179-201, 221-243, 256-278, 348-368, 375-397, 407-429 and
FT                   434-452"
FT   misc_feature    33402..35231
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF02705, DE K+ potassium transporter,
FT                   score 2e-156"
FT   CDS             complement(35322..36659)
FT                   /transl_table=11
FT                   /gene="argG"
FT                   /locus_tag="BB1986"
FT                   /product="argininosuccinate synthase"
FT                   /EC_number="6.3.4.5"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3537"
FT                   /db_xref="GOA:Q7WKW7"
FT                   /db_xref="InterPro:IPR018223"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKW7"
FT                   /protein_id="CAE32483.1"
FT                   /translation="MTTILPNLPTGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANL
FT                   GQPDEPDYDEIPRRAMQYGAEAARLVDCRAQLVAEGIAALQAGAFHISTAGLTYFNTTP
FT                   IGRAVTGTMLVAAMKEDGVNIWGDGSTFKGNDIERFYRYGLLTNPDLKIYKPWLDQTFI
FT                   DELGGRAEMSEYMRQAGFDYKMSAEKAYSTDSNMLGATHEAKDLELLNSGIRIVQPIMG
FT                   VAFWQDSVQIKAEEVTVRFEEGQPVALNGVEYADPVELLLEANRIGGRHGLGMSDQIEN
FT                   RIIEAKSRGIYEAPGLALLFIAYERLVTGIHNEDTIEQYRENGRKLGRLLYQGRWFDPQ
FT                   AIMLRETAQRWVARAITGEVTLELRRGNDYSLLNTESANLTYAPERLSMEKVENAPFTP
FT                   ADRIGQLTMRNLDIVDTREKLFTYVKTGLLAPSAGSALPQIKDGKK"
FT   misc_feature    complement(35403..36617)
FT                   /note="HMMPfam hit to PF00764, DE Arginosuccinate synthase,
FT                   score 4.2e-183"
FT   misc_feature    complement(36240..36275)
FT                   /note="PS00565 Argininosuccinate synthase signature 2."
FT   misc_feature    complement(36585..36611)
FT                   /note="PS00564 Argininosuccinate synthase signature 1."
FT   CDS             complement(36810..37751)
FT                   /transl_table=11
FT                   /gene="argF"
FT                   /locus_tag="BB1987"
FT                   /product="ornithine carbamoyltransferase"
FT                   /EC_number="2.1.3.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3538"
FT                   /db_xref="GOA:Q7WKW6"
FT                   /db_xref="HSSP:1PVV"
FT                   /db_xref="InterPro:IPR002292"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKW6"
FT                   /protein_id="CAE32484.1"
FT                   /translation="MTPPTTQNGPLRHFLQFKDFSPAEIAYVLERTRIIKDKFKRYEPH
FT                   MPLHDRTLAMVFEKASTRTRVSFEAGMYQMGGSVINLTSNDSQLGRSEPIEDTARVISR
FT                   MVDIVMIRTFEQTRIERFASHSRVPVINGLTNEYHPCQILADIFTYIEHRGPIAGKTVA
FT                   WIGDANNMSYTWLQAAEMLGFTLHVSTPAGYELDPARIGAPAAGVLKQFKDPMQACQGA
FT                   HLVTTDVWTSMGYEAENEERRAAFADWCVDAEMMAAADPQAVFMHCLPAHRGEEVTGEV
FT                   IDGAQSVVWDEAENRLHVQKALMEFLLLGQLA"
FT   misc_feature    complement(36828..37283)
FT                   /note="HMMPfam hit to PF00185, DE Aspartate/ornithine
FT                   carbamoyltransferase, Asp/Orn binding domain, score
FT                   2.6e-47"
FT   misc_feature    complement(37290..37718)
FT                   /note="HMMPfam hit to PF02729, DE Aspartate/ornithine
FT                   carbamoyltransferase, carbamoyl-P binding domain, score
FT                   6.5e-73"
FT   misc_feature    complement(37560..37583)
FT                   /note="PS00097 Aspartate and ornithine
FT                   carbamoyltransferases signature."
FT   CDS             complement(37803..38984)
FT                   /transl_table=11
FT                   /gene="argD"
FT                   /locus_tag="BB1988"
FT                   /product="putative acetylornithine aminotransferase"
FT                   /EC_number="2.6.1.11"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3539"
FT                   /db_xref="GOA:Q7WKW5"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKW5"
FT                   /protein_id="CAE32485.1"
FT                   /translation="MSSALANIYARLPVSFTHGRGVWLWDTGERRYLDALAGIGVSCLG
FT                   HGHPGLVAAISEQAARLIHTSNIYEVPQQAALARRLAELSGMSEVLFSNSGSEANEAAI
FT                   KLARYYGYKQGNTHAHIITMDSSWHGRTLATLAATGSDKARQGFGPMPSGFIQVPYNDL
FT                   PAIRAAGEAEPRVTAVLLEVLQGEGGIRPSDMAFLRGVRQLCTERGWLLMIDEVQSGIG
FT                   RTGKWFAHQWADIRPDVMTLAKGLAGGVPIGAMLAAGPAAGVFAPGSHGTTFGGGPLAC
FT                   AAGLAVIDAIEQEGLLANAHEVGAHLHAALASELAGVPGIIEVRGRGLMLGIELDRPCG
FT                   ILATRAMEAGLLINVTRERVVRLLPPLILSGEEADQIVRILVPLIKQFLAQQQ"
FT   misc_feature    complement(37818..38978)
FT                   /note="HMMPfam hit to PF00202, DE Aminotransferase
FT                   class-III, score 1.4e-140"
FT   misc_feature    complement(38238..38351)
FT                   /note="PS00600 Aminotransferases class-III
FT                   pyridoxal-phosphate attachment site."
FT   CDS             39195..39485
FT                   /transl_table=11
FT                   /locus_tag="BB1989"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3540"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKW4"
FT                   /protein_id="CAE32486.1"
FT                   /translation="MATRVKQFVIHGVTESGVRFRPSDWAERLAGVMAQFRPPGSAGNH
FT                   LTYSPYVLPVVIDGVRSVVVDQRLRELEPLAYKFVVDFAHDNHLKTEEREA"
FT   CDS             complement(39490..40398)
FT                   /transl_table=11
FT                   /locus_tag="BB1990"
FT                   /product="LysR family regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3541"
FT                   /db_xref="GOA:Q7WKW3"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKW3"
FT                   /protein_id="CAE32487.1"
FT                   /translation="MDRFDQYRVFAQVAEMGSFIKAAHALELPRASVSAAVQQLEGQVG
FT                   ARLLHRTTRQVRLTADGTQLLERIRPLLAEVEDIDQLFQASQRQAAGRLNIDVPSRIAR
FT                   RLVAPALPALLRRHPRLQLALGSGDRAIDLVREGVDCAVRIGVLHSSSLVVRPLGSLAL
FT                   INCASPAYLREHGAPGHPDELAAGHWTVGYASPQTGRALPWEYATPRGGTSLVEAASRV
FT                   VVNNAESYIACCLAGLGLIQIPRYDVQHLLDGGQLVEVMPDQRAASMPVALLYPHRRQR
FT                   SRRLAVFLEWFEALMQPHLEA"
FT   misc_feature    complement(39508..40140)
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 5e-33"
FT   misc_feature    complement(40210..40389)
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 2.8e-15"
FT   misc_feature    complement(40255..40347)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    complement(40285..40350)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1117.000, SD 2.99 at aa 17-38, sequence
FT                   GSFIKAAHALELPRASVSAAVQ"
FT   CDS             complement(40462..41235)
FT                   /transl_table=11
FT                   /locus_tag="BB1991"
FT                   /product="putative short chain dehydrogenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3542"
FT                   /db_xref="GOA:Q7WKW2"
FT                   /db_xref="HSSP:1E7W"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKW2"
FT                   /protein_id="CAE32488.1"
FT                   /translation="MADHSIQGKVALIAGGAKNLGGLIARDLAAHGARAIAIHYNSPAS
FT                   KADADATVAALQAAGAQAVALQGDLTTAAAVEKLYADALAAVGRPDIAINTVGKVLKKP
FT                   FSEISEAEYDEMAAVNAKSAFFFLKEAGRHVNDHGKIVTLVTSLLGAFTPFYSAYAGTK
FT                   APVEHYTRAAAKEFGARGISVTAVGPGPMDTPFFYGQESPEAVAYHQSAAALSPHSPTG
FT                   LTHIEDVVPFIRHLVSDGWWITGQTLLINGGYTTK"
FT   misc_feature    complement(40474..41217)
FT                   /note="HMMPfam hit to PF00106, DE short chain
FT                   dehydrogenase, score 2.6e-27"
FT   CDS             complement(41382..42335)
FT                   /transl_table=11
FT                   /locus_tag="BB1992"
FT                   /product="putative D-isomer specific 2-hydroxyacid
FT                   dehydrogenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3543"
FT                   /db_xref="GOA:Q7WKW1"
FT                   /db_xref="HSSP:1GDH"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKW1"
FT                   /protein_id="CAE32489.1"
FT                   /translation="MTTKHRIIQVGSLAGSPTANRRLADEYDVLELWQQADRAAALARH
FT                   GKGVTALVTSANFGADAALIDALPDLKAICSWGVGYETIDVDAARKRGVLVSNTPDVLT
FT                   DCVADLAWGLLISGARRMAQGDRFVRAGQWGQVHGSIPLGTRVSGKNLGIIGLGRIGEA
FT                   IARRGDGFDMQVRYHNRRRRDDVSYGYESSLADLARWADFLVVATVGGPSTRHLVNQEV
FT                   LEALGPKGLIINIARGPVIDEAALVAALQAGKLGGAALDVFEHEPSVPDALKASDETVL
FT                   LPHIGSATFETRMAMENLMLDNLASFFKTGGVITPV"
FT   misc_feature    complement(41484..42029)
FT                   /note="HMMPfam hit to PF02826, DE D-isomer specific
FT                   2-hydroxyacid dehydrogenase, NAD binding domain, score
FT                   2.5e-36"
FT   misc_feature    complement(41799..41882)
FT                   /note="PS00065 D-isomer specific 2-hydroxyacid
FT                   dehydrogenases NAD-binding signature."
FT   misc_feature    complement(42033..42317)
FT                   /note="HMMPfam hit to PF00389, DE D-isomer specific
FT                   2-hydroxyacid dehydrogenase, catalytic domain, score
FT                   1.6e-17"
FT   misc_feature    complement(42264..42335)
FT                   /note="Signal peptide predicted for BB1992 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.769) with cleavage site
FT                   probability 0.733 between residues 24 and 25"
FT   CDS             complement(42438..43409)
FT                   /transl_table=11
FT                   /locus_tag="BB1993"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3544"
FT                   /db_xref="GOA:Q7WKW0"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKW0"
FT                   /protein_id="CAE32490.1"
FT                   /translation="MNKLKSLLAAAGMAACAVGAAHAASYPDKPITMIVPFVPGGSSDI
FT                   TARAVTPGMTKILGQSFVVENKPGANSAIGAQALARSTPDGYTMMVGSIGTFAINEALY
FT                   KKLAYNPSKDFSYLTQAVRNPNVLVAPPSFPANTVAELIDYARKNPGKVSYASSGTGSS
FT                   DHLSAILFRQRTDTTGVDVPYKGGGAAIADLLGAQVNVSFQNLGAVQTHIKGGKLKALA
FT                   ITGDKRVGELPDVPTLAEAGVKDMVVYSWQGFAVPKDTPPAIVKQLAEALRTTLRDPQV
FT                   EKTLQGLGFEVVANTPAEFSRFQQDEVKRWREVIEKGGIQLE"
FT   misc_feature    complement(42450..43274)
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 6.5e-119"
FT   misc_feature    complement(43332..43391)
FT                   /note="1 probable transmembrane helix predicted for BB1993
FT                   by TMHMM2.0 at aa 7-26"
FT   misc_feature    complement(43341..43409)
FT                   /note="Signal peptide predicted for BB1993 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 23 and 24"
FT   misc_feature    complement(43362..43394)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(43491..43682)
FT                   /transl_table=11
FT                   /locus_tag="BB1994"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3545"
FT                   /db_xref="GOA:Q7WKV9"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV9"
FT                   /protein_id="CAE32491.1"
FT                   /translation="MFAIPTNRVRGVLAALRQGSVRARLQEQGARPSGNTLEPFKAFMA
FT                   DEARKRAQVVRQSGATVD"
FT   CDS             43891..44808
FT                   /transl_table=11
FT                   /locus_tag="BB1995"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3546"
FT                   /db_xref="GOA:Q7WKV8"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV8"
FT                   /protein_id="CAE32492.1"
FT                   /translation="MKTTPVTPDDLQRSVIAVPPLARHADLTLNPAANQAVLRHLEAGG
FT                   VRSVMYGGNANFYHVQVSEYAQLLDFLAESAGPDTWVLPSAGPDYGKLMDQAAILRTRD
FT                   FPTAMLLPMSFPYTDAGLADGIRRFSDAMDRPAVVYIKSSDYLAPATVARLIGEGRIAA
FT                   LKYAVVREDPARDPYLDALLKEVDPRWIVSGIGERPAIVHFRQFGLRSFTSGSVCVAPR
FT                   GSMRLLHLLHQGDFEAAEQVRAAYIPLEDCRDGISPIRVLHDAVTLAGVADMGPMLPLL
FT                   SGLDPADRERVAPVARALLAGDRQ"
FT   CDS             44871..45641
FT                   /transl_table=11
FT                   /locus_tag="BB1996"
FT                   /product="GntR family regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3547"
FT                   /db_xref="GOA:Q7WKV7"
FT                   /db_xref="InterPro:IPR016160"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV7"
FT                   /protein_id="CAE32493.1"
FT                   /translation="MPVARKQESAKSAAVDADGGVALHLERGQRVRLADQLYGQIFDQI
FT                   ASGRLNVGDKLPSEHEICEKFGVSRPVVREALLRLRADGLVTAHQGLGTFVSHQPAPRL
FT                   KTFSDVQNVGAYLRAQEVRVALEGDAARLAALRRTDEQLHKIGEAHAAFVEELEHGRVS
FT                   PEADLAFHASIAEASGNDFYLGVLETIHESISGFMRLTLSLTRTGSRQRAQRVADEHAA
FT                   ILGAIREQDAERARIAMQFHLGQARHRLVDRDKD"
FT   misc_feature    44979..45158
FT                   /note="HMMPfam hit to PF00392, DE Bacterial regulatory
FT                   proteins, gntR family, score 1.4e-22"
FT   misc_feature    45036..45110
FT                   /note="PS00043 Bacterial regulatory proteins, gntR family
FT                   signature."
FT   misc_feature    45393..45416
FT                   /note="PS00687 Aldehyde dehydrogenases glutamic acid active
FT                   site."
FT   CDS             45698..46810
FT                   /transl_table=11
FT                   /locus_tag="BB1997"
FT                   /product="putative malate dehydrogenase"
FT                   /EC_number="1.1.1.37"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2780"
FT                   /db_xref="GOA:Q7WKV6"
FT                   /db_xref="InterPro:IPR003767"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV6"
FT                   /protein_id="CAE32494.1"
FT                   /translation="MPESGMEADMVAIGRVREQIDRVLRAWGMPEAPAGVTADLMAETD
FT                   LLGIDSHGISMLPSYEDKLRAGTLRIDAQPRLVREGTASALLDGMGGLGHPVAAQAMRM
FT                   AVDKAFEHGVGAVSVRNSHHFGAAGVYARLAVQRGAVALVTSSATTLIMVPTHGARPML
FT                   GTNPIAFGAPAAHNDALLLDMATTTVAANKVKVYDYYGKPLPPGWAVDGAGAGVTDSAA
FT                   AMQFIFQRPEGGLTPLGGTAEMSSHKGYGLAIMAQVLGGTLGGSLMAARHAARRRPDDP
FT                   DDVGHFFLALDPDAFRAGGSFESEMDDLIDTLHDTPAADPAQPVLVPGDPEAAERARRL
FT                   RDGVPLAAALRERLRRICERSGAEYVLDAG"
FT   misc_feature    45728..46768
FT                   /note="HMMPfam hit to PF02615, DE Malate/L-lactate
FT                   dehydrogenase, score 1.6e-83"
FT   CDS             46859..48604
FT                   /transl_table=11
FT                   /locus_tag="BB1998"
FT                   /product="putative dihydroxy-acid dehydratase"
FT                   /EC_number="4.2.1.9"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2779"
FT                   /db_xref="GOA:Q7WKV5"
FT                   /db_xref="InterPro:IPR000581"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV5"
FT                   /protein_id="CAE32495.1"
FT                   /translation="MSQAPKRKRPEDLRSHRWYGVKDLRAFGHRSRTAQMGYHRSDYAG
FT                   KPVIAIINTWSDINPCHSHFKQRVEEVKRGIWQAGGFPVEMPAMSLSEPFQKPTTMLYR
FT                   NLLAMETEELLRSYPADGCVLMGGCDKTTPALLMGAVSMGLPTVFVPAGPMLRGNWNGN
FT                   TLGSGSDTWKYWAELRAGNITEEDWQGVEDGIARSPGHCMTMGTASTMTAAVEALGLCL
FT                   SGYSSIPAPDSRHAQMASLTGKRIVEMVWEDLKPADILTAASFDNAVRTVLALSGSTNA
FT                   VVHLIALARRAGFGLDLERFDHLARSTPVLANLRPAGQYLMEDFYYAGGLRALLAQLGD
FT                   LLDTRQMTVDGRTLGENIAGARVFNDEVIRSRERALIERDGLAVLRGNLAPDGAVIKPA
FT                   AMEARLQRHTGRAVVFKDYNDMAERIDAPDLDIDADSVIVLQNAGPQGAPGMPEWGQLP
FT                   IPQKLLKQGVRDMVRISDARMSGTSYGACVLHVAPEAYVGGPLALVRSGDRIALDVPGR
FT                   RIDVLISDEELAARKAAWQAPPPKFERGFGVLYLKHIGQADSGCDFDFLQTRPQQAAEG
FT                   EPEIH"
FT   misc_feature    46994..48550
FT                   /note="HMMPfam hit to PF00920, DE Dehydratase family, score
FT                   3.8e-221"
FT   misc_feature    47243..47275
FT                   /note="PS00886 Dihydroxy-acid and 6-phosphogluconate
FT                   dehydratases signature 1."
FT   CDS             48650..49639
FT                   /transl_table=11
FT                   /locus_tag="BB1999"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2775"
FT                   /db_xref="GOA:Q7WKV4"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV4"
FT                   /protein_id="CAE32496.1"
FT                   /translation="MTKIGFRLAGARRWTAALAGLLLAGAAHAQADWPSRPVHLVVPFP
FT                   PGGSTDSVGRLLAAELAKDLGQSVIVENKGGANGNIGSDMVAKAAPDGYTLLLSGVGSN
FT                   AINYALYQSMPYRNSDFAHISLLATGPNVLVANPDFPARNFADFIKLAKENPGKYTHAS
FT                   SGNGSSGHLAMEMLKQAAGIELVHVPYKGGAAAITDTIGGRVSVLFLNQDNLLPQVQGG
FT                   KVRALAVASVKRNPAYPDTPTIAESGYPGFAAESWFGLSAPAGTPAPVIDRLSQATVRA
FT                   LAAPQLRDKLQAVGFVVVGNDPKAFDAFVAAEIDKWGKAAQASGARMD"
FT   misc_feature    48650..48736
FT                   /note="Signal peptide predicted for BB1999 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.780 between residues 29 and 30"
FT   misc_feature    48806..49627
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 2.8e-114"
FT   CDS             49690..50466
FT                   /transl_table=11
FT                   /locus_tag="BB2000"
FT                   /product="putative aldolase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2774"
FT                   /db_xref="GOA:Q7WKV3"
FT                   /db_xref="HSSP:1DXE"
FT                   /db_xref="InterPro:IPR005000"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV3"
FT                   /protein_id="CAE32497.1"
FT                   /translation="MTTMNSPLPNRFRQRILAREQLIGYWLSLASHITAEVAGMADFDW
FT                   LLLDAEHSPNDVPLLLQQLQALQGSASAAVGRPSWNDPVEIKRMLDIGFYNLLIPFIES
FT                   ADDARRAVAATRYPPQGMRGVSVAQRSNRYGTVTDYLRTINDNICVLLQIESRPGVEAV
FT                   DEIAAVDGVDGVFIGPSDLAAALGHLGNPGHPEVQEAIRHLHGRVAAQGKAVGILAPVQ
FT                   ADARRYLDMGAHFVAVGSDLGVFKQATFALRAAFPA"
FT   misc_feature    49705..50460
FT                   /note="HMMPfam hit to PF03328, DE HpcH/HpaI aldolase
FT                   family, score 2.3e-121"
FT   CDS             complement(50584..50847)
FT                   /transl_table=11
FT                   /gene="rpst"
FT                   /locus_tag="BB2001"
FT                   /product="30s ribosomal protein s20"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2773"
FT                   /db_xref="GOA:Q7WKV2"
FT                   /db_xref="InterPro:IPR002583"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKV2"
FT                   /protein_id="CAE32498.1"
FT                   /translation="MANTAQARKRARQSVQRNKHNSSLRSMLRTAIKRVRQSIATGDKA
FT                   AAGETLRKATSVIDSVADKNIIHKNKAARHKSRLAAAVKALA"
FT   misc_feature    complement(50593..50844)
FT                   /note="HMMPfam hit to PF01649, DE Ribosomal protein S20,
FT                   score 1.1e-29"
FT   CDS             complement(50948..51952)
FT                   /transl_table=11
FT                   /locus_tag="BB2002"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2772"
FT                   /db_xref="InterPro:IPR012373"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV1"
FT                   /protein_id="CAE32499.1"
FT                   /translation="MNTAANTPPLSDQIVDWLLLLRSGQATRTDYARFLAWRNANPMNE
FT                   NAWQQLTGTLAGANTGRLGDAYPTGYDGADQAPPAELPAETLAMPARRHFLSSVGALAL
FT                   GGAGLAAAAYVGNSFYPLNALAADAATNTGERRRYMLSDGSELLLDARSRVNLEFTATY
FT                   RRLHLLEGAVSVTVRADPYRPFSVQTAEGVVRSLGTRYMVRQQVRRTLVVVHENDVEIE
FT                   TVANARGIVRAGTGARFDATRVDTPRAGLAAHAAWENGWIEAHGRPLADVVAAMRPYRR
FT                   GTLRVSMAAGGLPVSGTFPLDDSDATLVALQASVPIRVTRLTPWFVSIGVATA"
FT   misc_feature    complement(51605..51673)
FT                   /note="1 probable transmembrane helix predicted for BB2002
FT                   by TMHMM2.0 at aa 94-116"
FT   misc_feature    complement(51800..51829)
FT                   /note="PS00904 Protein prenyltransferases alpha subunit
FT                   repeat signature."
FT   CDS             complement(52162..53754)
FT                   /transl_table=11
FT                   /locus_tag="BB2003"
FT                   /product="conserved integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2771"
FT                   /db_xref="GOA:Q7WKV0"
FT                   /db_xref="InterPro:IPR004268"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKV0"
FT                   /protein_id="CAE32500.1"
FT                   /translation="MPARCFGTLAFMALLRSAATVSSFTLLSRITGLVRDILVARAFGA
FT                   GPLTDAFWVAFRIPNLLRRLFAEGAFAQAFVPILGAARTERSDAEVRTLLDRVAVLLTA
FT                   ALMLVTLAGVVAAPWVVTAMASGLRSAERGAEFGAAVWMTRVMFPYILCMSLIAFASGV
FT                   LNTWRRFAVPAFTPVLLNLAMIAACLWLAPRMDVPIYALALGVMAGGVAQLAVQWLALA
FT                   RLGLTPRWSLDLRQAWRDPTVQRILKQMAPATLGVSVAQISLLINTNIATWLQPGSVTW
FT                   LSFADRLMEFPTALLGVALGTVLLPSLSAAHARADQDGYSGLLDWGLRLVLMLGLPAAL
FT                   GLALLSDGLVATLFHYGAFQAQDVQQTRLAVIAYSAGLIGLLAIKILAPGFYAKQDIRT
FT                   PVKIAIMVLVLTQLLNAILVPWLAHAGLALAIGLGACINALALLTGLRRRGVYRPGAGW
FT                   GRFMLRLVPALAALAAVLLAADRHIDWIALQPWPGLRALWLGGVLLACMLAYFGLLLAA
FT                   GMRPRDFTRRGAR"
FT   misc_feature    complement(join(52207..52275,52318..52386,52420..52479,
FT                   52489..52548,52582..52650,52693..52761,52822..52890,
FT                   52933..53001,53098..53166,53179..53247,53266..53334,
FT                   53392..53460,53587..53646,53674..53742))
FT                   /note="14 probable transmembrane helices predicted for
FT                   BB2003 by TMHMM2.0 at aa 5-27, 37-56, 99-121, 141-163,
FT                   170-192, 197-219, 252-274, 289-311, 332-354, 369-391,
FT                   403-422, 426-445, 457-479 and 494-516"
FT   misc_feature    complement(52246..53640)
FT                   /note="HMMPfam hit to PF03023, DE Virulence factor MVIN,
FT                   score 2.2e-142"
FT   misc_feature    complement(53422..53469)
FT                   /note="PS00038 Myc-type, 'helix-loop-helix' dimerization
FT                   domain signature."
FT   misc_feature    complement(53701..53754)
FT                   /note="Signal peptide predicted for BB2003 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.986) with cleavage site
FT                   probability 0.473 between residues 18 and 19"
FT   CDS             complement(53780..54538)
FT                   /transl_table=11
FT                   /locus_tag="BB2004"
FT                   /product="probable short-chain dehydrogenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2770"
FT                   /db_xref="GOA:Q7WKU9"
FT                   /db_xref="HSSP:1E3S"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKU9"
FT                   /protein_id="CAE32501.1"
FT                   /translation="MEIANKVFIVTGGASGLGAGTVRMLVANGAKVVIADVQDEPGQAL
FT                   AKELNQRYVHCDVTQEADGKQAVAAAVELGPLFGLVNCAGVAPAAKIVGKNGAHPLDLF
FT                   QKVVSINLIGSFNMMRLAAEAMSANTPESTGERGVLINTASVAAFDGQIGQAAYAASKA
FT                   GVAGMTLPIARDLSKTGIRCMTIAPGIFGTPMIFGMPQEVQDSLAASIPFPARLGRPED
FT                   YAKLVHSIITNDMLNGETIRLDGAIRMPPK"
FT   misc_feature    complement(53798..54529)
FT                   /note="HMMPfam hit to PF00106, DE short chain
FT                   dehydrogenase, score 2.4e-48"
FT   misc_feature    complement(54020..54106)
FT                   /note="PS00061 Short-chain dehydrogenases/reductases family
FT                   signature."
FT   CDS             complement(54630..55286)
FT                   /transl_table=11
FT                   /gene="adK"
FT                   /locus_tag="BB2005"
FT                   /product="adenylate kinase"
FT                   /EC_number="2.7.4.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2769"
FT                   /db_xref="GOA:Q7WKU8"
FT                   /db_xref="InterPro:IPR007862"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKU8"
FT                   /protein_id="CAE32502.1"
FT                   /translation="MRLILLGPPGAGKGTQAAFLTQHYGIPQISTGDMLRAAVKAGTPL
FT                   GLEAKKVMDAGGLVSDDLIIGLVRDRLTQPDCANGYLFDGFPRTIPQADALKSAGIALD
FT                   YVVEIEVPESDIIERMSGRRVHPASGRSYHVRFNPPKAEGVDDVTGEPLVQRDDDREET
FT                   VRHRLNVYQNQTRPLVDYYSSWAQSDAAAAPKYRKISGVGSVDEIKSRLSQALQS"
FT   misc_feature    complement(54726..55274)
FT                   /note="HMMPfam hit to PF00406, DE Adenylate kinase, score
FT                   4.3e-127"
FT   misc_feature    complement(55011..55046)
FT                   /note="PS00113 Adenylate kinase signature."
FT   CDS             complement(55377..56141)
FT                   /transl_table=11
FT                   /locus_tag="BB2006"
FT                   /product="3-deoxy-manno-octulosonate cytidylyltransferase"
FT                   /EC_number="2.7.7.38"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2768"
FT                   /db_xref="GOA:Q7WKU7"
FT                   /db_xref="HSSP:1VH3"
FT                   /db_xref="InterPro:IPR004528"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKU7"
FT                   /protein_id="CAE32503.1"
FT                   /translation="MSFTVLIPARLASTRLPDKPLADIAGKPMVVRVAERAALSGAERV
FT                   MIATDDARVQQAAADHGHAAILTRPDHPTGTDRLSEAVDALGLPDDAIVVNVQGDEPLI
FT                   EPALIDAVAAQLVAAPHADIATCACPLADAEALFDPNVVKVVCAADRRALYFSRAPIPW
FT                   ARDALAGGARVLAPGLPAWHHIGIYAYRVAFLRRFPALSQGQLERYESLEQLRAMEHGH
FT                   VIVVHHTDSAPAAGVDTPADLERARAAYTNRL"
FT   misc_feature    complement(55470..56132)
FT                   /note="HMMPfam hit to PF02348, DE Cytidylyltransferase,
FT                   score 5.2e-61"
FT   CDS             complement(56151..56339)
FT                   /transl_table=11
FT                   /locus_tag="BB2007"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2767"
FT                   /db_xref="InterPro:IPR005651"
FT                   /db_xref="PDB:2JS4"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKU6"
FT                   /protein_id="CAE32504.1"
FT                   /translation="MESRLLDILVCPVCKGRLEFQRAQAELVCNADRLAFPVRDGVPIM
FT                   LEAEARSLDAEAPAQPS"
FT   misc_feature    complement(56184..56339)
FT                   /note="HMMPfam hit to PF03966, DE Protein of unknown
FT                   function (DUF343), score 2.5e-19"
FT   CDS             complement(56395..57438)
FT                   /transl_table=11
FT                   /locus_tag="BB2008"
FT                   /product="putative tetraacyldisaccharide 4'-kinase"
FT                   /EC_number="2.7.1.130"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2766"
FT                   /db_xref="GOA:Q7WKU5"
FT                   /db_xref="InterPro:IPR003758"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKU5"
FT                   /protein_id="CAE32505.1"
FT                   /translation="MNAPRCLRRLLERQWRQGGWLSTLLRPLAALTGLVVARKRNAYLT
FT                   GARAAWRAPVPVVVVGNIYVGGTGKTPVVIEVVRQLQARGWTPGVVSRGYGVDVGAAPR
FT                   VGQGQLAAADYGDEPALIARATGAAIAVHPHRPRAVQALLRAHPGVDVVVSDDGLQHLA
FT                   LARDVEIVVQDERGVGNGRLLPAGPLREPAQRLADVDAIVTNAGRPRAAAAPAAGAPRQ
FT                   LAMWLEPTHAQRVTDGATRTLADLAALPPARLAAAAGIGNPARFFQTLEQAGIRPAHTL
FT                   ALPDHYAYAQSPFTALDADLILVTAKDAIKCAALDDPRLWAVQVGTRLSDPDFGDWLSA
FT                   TLRARQP"
FT   misc_feature    complement(56401..57381)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF02606, DE Tetraacyldisaccharide-1-P
FT                   4'-kinase, score 8.9e-69"
FT   CDS             complement(57435..57848)
FT                   /transl_table=11
FT                   /locus_tag="BB2009"
FT                   /product="putative biopolymer transport protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2765"
FT                   /db_xref="GOA:Q7WKU4"
FT                   /db_xref="InterPro:IPR003400"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKU4"
FT                   /protein_id="CAE32506.1"
FT                   /translation="MNFRGGRASQDELEINLIPLIDVLLVILIFLAATTSFARFTQLKV
FT                   VLPEAAAEQEAPPALEIAISQDGHYALNGNLLDAANPTDIAHALSLATAGKADPIVVIN
FT                   ADAQATHQAVVNVMEAARLAGIGRVNFAAQTAR"
FT   misc_feature    complement(57441..57824)
FT                   /note="HMMPfam hit to PF02472, DE Biopolymer transport
FT                   protein ExbD/TolR, score 2.3e-19"
FT   misc_feature    complement(57744..57812)
FT                   /note="1 probable transmembrane helix predicted for BB2009
FT                   by TMHMM2.0 at aa 13-35"
FT   CDS             complement(57845..58465)
FT                   /transl_table=11
FT                   /locus_tag="BB2010"
FT                   /product="putative biopolymer transport protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2764"
FT                   /db_xref="GOA:Q7WKU3"
FT                   /db_xref="InterPro:IPR002898"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKU3"
FT                   /protein_id="CAE32507.1"
FT                   /translation="MLNLLREAGWPIWPLLATSILGLALIVERLLALRRSRILPRGLNE
FT                   QVLEMLRNQQDTPEALARLERNSPLGRVLAEVLRQRHLPREELRTAVEDAGRGAAYELG
FT                   RYVSAIGTIAVVAPLMGLFGTVVGMIEIFGSYAPGASDPAQLARGISIALYNTGFGILI
FT                   AIPAMIVHRYLRARIDGYLHAMEQSAGRLARYVAPARSREARP"
FT   misc_feature    complement(57896..58309)
FT                   /note="HMMPfam hit to PF01618, DE MotA/TolQ/ExbB proton
FT                   channel family, score 1.9e-18"
FT   misc_feature    complement(join(57953..58021,58079..58147,58370..58438))
FT                   /note="3 probable transmembrane helices predicted for
FT                   BB2010 by TMHMM2.0 at aa 10-32, 107-129 and 149-171"
FT   CDS             58815..60206
FT                   /transl_table=11
FT                   /gene="xseA"
FT                   /locus_tag="BB2011"
FT                   /product="exodeoxyribonuclease large subunit"
FT                   /EC_number="3.1.11.6"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2762"
FT                   /db_xref="GOA:Q7WKU2"
FT                   /db_xref="InterPro:IPR004365"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKU2"
FT                   /protein_id="CAE32508.1"
FT                   /translation="MTIGLSVTNDVFARDILTVAQLNQAVGQLLERSIPSLWVRGEISN
FT                   FTQAASGHWYFTLKDSRAAVRTVMFRSRAAQVGFVPRPGDQVEVRARVSLYEPRGDYQL
FT                   QADGMRRAGVGNLYEAFLRLKAQLQDEGLFDPQRKRQPARLPRAIGVVTSLHAAALRDV
FT                   LSALARRAPQVPVIIYPAPVQGADAAARLAARVAQANQRAEVDTLLLVRGGGSIEDLWS
FT                   FNDEALAREVAASDIPVISGVGHETDFTIVDFVADLRAPTPTAAAELACVPRGDLLAAL
FT                   RHTAERLARAQQRRLDQAAQRLDRAAAMLTSPAQRLAHQQERLNTLRHRLASAWRGPQG
FT                   RRVARLDMLAQRLAHRRPDTGRAAERSAALLAQLGRAQARLAAARQARLDTLAAQLRAL
FT                   DPQHTLARGYAIVRDAAGAIVTDATRLAARDRIEIAVARGRIGADVTDIGTPDGTDGNP
FT                   ALRRG"
FT   misc_feature    58923..59150
FT                   /note="HMMPfam hit to PF01336, DE OB-fold nucleic acid
FT                   binding domain, score 2e-07"
FT   misc_feature    59427..60008
FT                   /note="HMMPfam hit to PF02601, DE Exonuclease VII, large
FT                   subunit, score 2.3e-37"
FT   CDS             60279..60857
FT                   /transl_table=11
FT                   /gene="sodB"
FT                   /locus_tag="BB2012"
FT                   /product="superoxide dismutase"
FT                   /EC_number="1.15.1.1"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2761"
FT                   /db_xref="GOA:Q7WKU1"
FT                   /db_xref="HSSP:1ISC"
FT                   /db_xref="InterPro:IPR019833"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKU1"
FT                   /protein_id="CAE32509.1"
FT                   /translation="MAHTLPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPG
FT                   TEFENLSLEEIVKKSSGGVFNNAAQVWNHTFYWNSLSPNGGGEPTGALADAIKAKWGSV
FT                   DAFKEAFNKSAAGNFGSGWTWLVKKADGTLDIVNTSNAATPLTTADKALLTCDVWEHAY
FT                   YIDYRNARPKYLENFWALVNWEFAAKNFA"
FT   misc_feature    60279..60524
FT                   /note="HMMPfam hit to PF00081, DE Iron/manganese superoxide
FT                   dismutases, alpha-hairpin domain, score 1e-51"
FT   misc_feature    60534..60851
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF02777, DE Iron/manganese superoxide
FT                   dismutases, C-terminal domain, score 1e-68"
FT   misc_feature    60747..60770
FT                   /note="PS00088 Manganese and iron superoxide dismutases
FT                   signature."
FT   CDS             join(60974..61330,61329..62369)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BB2013"
FT                   /product="putative chloride-channel protein (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2760"
FT   misc_feature    60974..61150
FT                   /note="Signal peptide predicted for BB2013 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.992) with cleavage site
FT                   probability 0.570 between residues 59 and 60"
FT   misc_feature    join(61079..61147,61190..61258,61319..61387,61493..61561,
FT                   61598..61666,61709..61777,61838..61906,61964..62032,
FT                   62108..62176,62204..62257)
FT                   /note="10 probable transmembrane helices predicted for
FT                   BB2013 by TMHMM2.0 at aa 36-58, 73-95, 116-138, 174-196,
FT                   209-231, 246-268, 289-311, 331-353, 379-401 and 411-428"
FT   misc_feature    join(61214..61294,61317..62288)
FT                   /note="HMMPfam hit to PF00654, DE Voltage gated chloride
FT                   channel, score 3.4e-14"
FT   CDS             62488..63693
FT                   /transl_table=11
FT                   /locus_tag="BB2014"
FT                   /product="putative thiolase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2759"
FT                   /db_xref="GOA:Q7WKU0"
FT                   /db_xref="HSSP:1AFW"
FT                   /db_xref="InterPro:IPR002155"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKU0"
FT                   /protein_id="CAE32511.1"
FT                   /translation="MTVQAFICDAIRTPFGRYGGALSSVRADDLAAVPIKALMARNPGV
FT                   RWEELDDVLYGCANQAGEDNRNVARMAALLAGLPIEVPGATINRLCGSGLDAVGSAARA
FT                   IAAGQASLMLAGGVESMSRAPFVMGKADSAFSRNAAIYDTTIGWRFVNKLMKAQYGVDS
FT                   MPETAENVADDFKISRADQDKFALASQQKALRAQQSGFFDAEITPVSIAQKKGDPVVVS
FT                   KDEHPRDTSLEALAKLKGVVREGGSVTAGNASGVNDGAAALLLADEKAAASHGLTPRAR
FT                   VVGMATAGVAPRIMGMGPAPATRKVLAQTGLSLAQMDVIELNEAFAAQGLAVMRDLGIA
FT                   DDDARVNINGGAIALGHPLGASGARLVTTAINQLQRGGGRYALCTMCIGVGQGIALIIE
FT                   RV"
FT   misc_feature    62491..63294
FT                   /note="HMMPfam hit to PF00108, DE Thiolase, N-terminal
FT                   domain, score 3.6e-97"
FT   misc_feature    62746..62802
FT                   /note="PS00098 Thiolases acyl-enzyme intermediate
FT                   signature."
FT   misc_feature    63307..63687
FT                   /note="HMMPfam hit to PF02803, DE Thiolase, C-terminal
FT                   domain, score 3.8e-64"
FT   misc_feature    63526..63576
FT                   /note="PS00737 Thiolases signature 2."
FT   misc_feature    63631..63672
FT                   /note="PS00099 Thiolases active site."
FT   CDS             complement(63793..64311)
FT                   /transl_table=11
FT                   /locus_tag="BB2015"
FT                   /product="exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2758"
FT                   /db_xref="InterPro:IPR003795"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT9"
FT                   /protein_id="CAE32512.1"
FT                   /translation="MHCPPTPAPMSIAAVLPVLRRIARSRFCAAVLALSVLSFGAAAQH
FT                   NSSGKPQPRLPTTPLSAGIHIIHAEVADNDDTRRQGLMYRTELPGNDGMLFVFEAPDQQ
FT                   CFWMRNTPLPLSIAFIADDGTIVNIEDMAPRTDDTHCSRKSVRYALEMAQGWFARHGIK
FT                   AGARINGLP"
FT   misc_feature    complement(63799..64137)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF02643, DE Uncharacterized ACR,
FT                   COG1430, score 6.5e-24"
FT   misc_feature    complement(64183..64311)
FT                   /note="Signal peptide predicted for BB2015 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.779) with cleavage site
FT                   probability 0.537 between residues 43 and 44"
FT   CDS             complement(64406..64651)
FT                   /transl_table=11
FT                   /locus_tag="BB2016"
FT                   /product="putative cold-shock protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2757"
FT                   /db_xref="GOA:Q7WKT8"
FT                   /db_xref="HSSP:1C9O"
FT                   /db_xref="InterPro:IPR019844"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT8"
FT                   /protein_id="CAE32513.1"
FT                   /translation="MSDTTATAVQGDNPKATGTVKWFNDAKGFGFITPDDGGEDLFAHF
FT                   SSIQMNGFKTLKEGQKVSFEIIQGPKGKQALNITSA"
FT   misc_feature    complement(64412..64609)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00313, DE 'Cold-shock' DNA-binding
FT                   domain, score 4.8e-41"
FT   misc_feature    complement(64508..64567)
FT                   /note="PS00352 'Cold-shock' DNA-binding domain signature."
FT   CDS             64879..65193
FT                   /transl_table=11
FT                   /locus_tag="BB2017"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2756"
FT                   /db_xref="GOA:Q7WKT7"
FT                   /db_xref="InterPro:IPR014719"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKT7"
FT                   /protein_id="CAE32514.1"
FT                   /translation="MSSTLDTQHDVVVEKQPARTAPPPMYQVVLLNDDYTPMEFVVKVL
FT                   QKFFGKNSEDATRIMLQVHHEGRAVCGVYPRDLAATRIAQVSQYARARQHPLQCIMEPA
FT                   "
FT   misc_feature    64924..65172
FT                   /note="HMMPfam hit to PF02617, DE Uncharacterized ACR,
FT                   COG2127, score 1.2e-33"
FT   CDS             65292..70472
FT                   /transl_table=11
FT                   /locus_tag="BB2018"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2755"
FT                   /db_xref="GOA:Q7WKT6"
FT                   /db_xref="InterPro:IPR011625"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT6"
FT                   /protein_id="CAE32515.1"
FT                   /translation="MKKGAWLALGGAVVVAAAVGTGWWMGKGGGQPAATPAAVTAPAAG
FT                   QAAQPAPQAAQPATGQAVVGSADPFAALNCQPRQYNDTLSLALTFTQPVDRRIDLSGLI
FT                   KVVDTGPLAQSDDENAAIERPAPARAGAAGAKGKQVDGAWVVGDNPRVVYFPYVRPQRS
FT                   YAVQWQGDVPAGDGKSTLGAVGHCVVNTQAMPPSFYFASRGVVLPAGQNGGLPVATVNL
FT                   AEVDVQFLRVEPDRVPEFFGSVLGIGNDAGADDRDDADDWRYADNRSLKGSVSNWDLDR
FT                   LHGLTTSVYQGRFLTDDKPNRRHVTFLPIEGVKELQEPGIYVAVMSQPGRFRYEYQVTY
FT                   FYVSDIGLHTRRYAERIEAYTVSLKDGVAIPGALVEVLDGAGKVLAKANSDAQGHVRID
FT                   GDFAKSKVLRASRGKEMTVLALGEPALDLSEFDVGGHPGRSNNLFVYAGRNLYRPGETF
FT                   HVSVLPRDPDGRPLTAAPVSATLKRPDGRVVRTALWHPAKDQPGYIEQAIELPVDAQTG
FT                   AWMLELRIDPAARLPDAAWKFQVEEFLPERMKLQLDSAQTVLQPGQPWRVDVQGDYLYG
FT                   APAAGNRLLSSFQVKRNRYALPQQWPGFIFGDVADDTRRHYEELPESELDDAGAGQLEI
FT                   DPHTDGTHSPMSVRVSASLLESGGRPVVRSLERTVWPAPQLIAVRPLFDRDVAREGAPA
FT                   AFEITRVDASGKVVPVQQAQVRLYHEERQYYWRFDDQRGWHSGYTENEELTDSRVVDVG
FT                   ERTPLTLNVGWGRYRLEIADPQTGETLRYRFYAGWNAQDADAVGNRPDRVQLKLEGVPA
FT                   RPGDTVAMTITPPHDGQALVTVEGDRMLWSKWVPVQASGTQVEIPVDKAWKRHDLYVSA
FT                   TVFRPGSQGDRVTPARALGLAFLPIASDERRLQVSLSAPAKTRPETRATVRVKVEGAAG
FT                   KAARVTLSAVDVGILNINQYATPDPLDFFFGKHRYAPELLDMYGKLIEKMDGTQGRLKW
FT                   GGDAAMRGDSRSLPKKVKLVDLFSGPVKLDDKGEADIALDLPDFNGTLRLMAVAFTADQ
FT                   FGSADKEMTVAAPIVAELNTPRFITPGDQAAIALDVTNLSGATQKITVRLQALDPLAIA
FT                   DGTRTLTLKDKQRSTLRFVATTTGSYGLGLMRLSVDGEGAAEPVRIVRESVLQVQPAHA
FT                   PERRVRRVRLNPGEALPAPGDWTSAYFPDSVSVSMTLSNRPPINVSRLVDGLLTYPYGC
FT                   TEQTISAAIPWVLIDEAAAERFGLKVYSRADRESRVASALGRLAGMRAANGSYSLWGDS
FT                   SSRDVWLTAYTVGFMQDVRDHEFNLAPALLERPRQWLLEQLQQASGGFGTWSPNLRRTL
FT                   ASGRFDENDAAILREDHRRFAGLAAAALVLARDGKAPLSTVRQLYDNYQERARSPLPLM
FT                   QLAAAFKLMGDEGRMKTALDEAMTRSYGINRRAGSNYLDEWLGDYGSAVRDYALSYALV
FT                   NQYGLKHDRTEALLDQVGGYLGVRSYLSTQEQMALLLAAGATGAESRTPWQAALQIGTG
FT                   ELKTLQGRDDHTLALSAGDLAGLQLRNTGSQSMFAEFDVQGTTMAAPAPRSDVIRLKRV
FT                   WYRPDGTAWNGGTLQTGDMLVVWVQAEASRLIPDALVVDRVPAGFEIENLNLSQSPDMQ
FT                   DWTIGGRRVAESMADPNIKHREFRDDRYVAATMLGRGKVDIFYLARVVTPGRYSVPATE
FT                   AEDMYRPELRAVGDSWSSIEIRDRAPRRP"
FT   misc_feature    65292..65342
FT                   /note="Signal peptide predicted for BB2018 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.997) with cleavage site
FT                   probability 0.376 between residues 17 and 18"
FT   CDS             70469..72637
FT                   /transl_table=11
FT                   /gene="pbp"
FT                   /locus_tag="BB2019"
FT                   /product="penicillin-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2754"
FT                   /db_xref="GOA:Q7WKT5"
FT                   /db_xref="InterPro:IPR001460"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT5"
FT                   /protein_id="CAE32516.1"
FT                   /translation="MTFRRLAGWRRPALAAAVLAGGVVMALLALDRLFPLPRFGSDGAQ
FT                   VVVAADGTPLRTYPSRDGVWRYPVGPGQVSPHYLETLLTYEDRWFYWHPGVNPFALARA
FT                   GWQWAAHGRIVSGGSTLTMQVARLLDPELAGQPSKTLSAKLRQAWRAIQLEMHYSKDEI
FT                   LGLYLSHAPMGGIVEGVEMGARMWLGKSAADLSHAEAALLTALPQAPSRLRPDRHPQAA
FT                   QLARDKVLQRMAQRGVWDAALVADARIENVVAPPLRARWLAPLAAQRLLGEAGPAAGVV
FT                   RSTLDPDIQSTVEAMLLDRVDALPPKVSMAVLVMDNDSLEVKAYAGSADFTDDSRYAHV
FT                   DMVRGVRSPGSTLKPFLYALALDEGLIHSESLLLDAPLSFGGYAPGNFQAAFAGPVSVA
FT                   QALQRSLNVPAVDLLDRVGPARFASVMLAGGVHLRMPAGAVPNLSLILGGGGTTLEELV
FT                   GAYRALARGGLSGRPRLRASQPRIEARLMSPGAAWIVRDILESGGHPDRPLFQGGAAGR
FT                   QLAWKTGTSFGFRDAWAVGVTDRYTIGAWVGRPDGTPNPGFFGANVAAPLLQDIVAALP
FT                   AGAPVPRTRPPQVQAVVTCWPLGWRLGSAPAGICPERRMAWALDDTVPPSFVGYADTAT
FT                   GPLRIEGVADGTILRPVPGRRAVTLEVGAQGASGEVWWMLDGKVYRSGAAGQAQTLTLS
FT                   RNGRYALTVMDGQGRYAGLEFEISGVTP"
FT   misc_feature    70469..70546
FT                   /note="Signal peptide predicted for BB2019 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.500 between residues 26 and 27"
FT   misc_feature    70601..71128
FT                   /note="HMMPfam hit to PF00912, DE Transglycosylase, score
FT                   2e-50"
FT   misc_feature    71018..71041
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    71327..72178
FT                   /note="HMMPfam hit to PF00905, DE Penicillin binding
FT                   protein transpeptidase domain, score 1.5e-12"
FT   CDS             72657..75005
FT                   /transl_table=11
FT                   /gene="clpA"
FT                   /locus_tag="BB2020"
FT                   /product="ATP-dependent clp protease ATP-binding"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2753"
FT                   /db_xref="GOA:Q7WKT4"
FT                   /db_xref="HSSP:1JBK"
FT                   /db_xref="InterPro:IPR019489"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT4"
FT                   /protein_id="CAE32517.1"
FT                   /translation="MYLTASMRYGGSVISQELEVSLHMAFVEARSARHEFITVEHLLLS
FT                   LLDNASAVEVLRACAANLDDLRRNLRQFVTENTPVIPSGAEVDTQPTLGFQRVIQRAIM
FT                   HVSAGGTGKKPVTGANVLVAIFGEKDSHAVYYLQQQGVTRLDVVNFLSHGITKQPQEES
FT                   SALPKEQQASGEEPGAESRQSPLDQYANDLNAAALAGRIDPLIGREHEVERVIQVLCRR
FT                   RKNNPLLVGEAGVGKTAIAEGLAWRITRGEVPEVLQTAQVFALDMGALLAGTKYRGDFE
FT                   QRLKGVLKQIRGNPDAILFIDEIHTLIGAGSASGGTLDASNLLKPALSSGQLKCIGATT
FT                   YTEFRGVFEKDHALSRRFQKIDVPEPSVEQTVQILRGLKSRFEEHHNVRYSAAALSAAA
FT                   ELSARYINDRHLPDKAIDVIDEAGAAQRLLPRSRQKKVIGKGEIEHIVSKIARIPPQSV
FT                   SNDDRSKLATLDRDLKTVVFGQDEAIGALTAAIKMARSGLGKPDKPIGAFLFSGPTGVG
FT                   KTEVARQLAFTMGIELLRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTEAITKQPHC
FT                   VLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKADFRNVILIMTTNAGAETLNRPAIG
FT                   FANERVAGDEMAEIRRMFTPEFRNRLDAIIPFSALSREIILRVVDKFLMQLEDQLHERR
FT                   VAAVFTEKLRDHLAKEGFDPLMGARPMQRLIQDTIRRALADELLFGKLVDGGNVTVDLD
FT                   DAGKVVLGFEAPGKPSSNAADKQEVELID"
FT   misc_feature    72729..72881
FT                   /note="HMMPfam hit to PF02861, DE Clp amino terminal
FT                   domain, score 1.4e-11"
FT   misc_feature    73332..73916
FT                   /note="HMMPfam hit to PF00004, DE ATPase family associated
FT                   with various cellular activities (AAA), score 3.4e-14"
FT   misc_feature    73347..73370
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    73611..73649
FT                   /note="PS00870 Chaperonins clpA/B signature 1."
FT   misc_feature    74175..74858
FT                   /note="HMMPfam hit to PF00004, DE ATPase family associated
FT                   with various cellular activities (AAA), score 0.00015"
FT   misc_feature    74190..74213
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    74259..74315
FT                   /note="PS00871 Chaperonins clpA/B signature 2."
FT   CDS             75010..76329
FT                   /transl_table=11
FT                   /locus_tag="BB2021"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2752"
FT                   /db_xref="InterPro:IPR007498"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT3"
FT                   /protein_id="CAE32518.1"
FT                   /translation="MDPRSLIACENCASICRQPDLEPGETAACARCGTTLWRYSGLTLS
FT                   NWLALALAALIVFVLANAYPVASLEVQGMVQRASLLDAIRVTWQQQHWVVAIMTGLAGF
FT                   GMPLVQLMVLLWVLGPLAAGRLPVGFRGAMRFLGLLRPWSMVQVFLLGVVVSVVKLAGM
FT                   AAVKPAVGLAGFAALTVLLTILGRLSPHVLWRYAERAGLVDVHVPRSGPGMVLTGCHVC
FT                   GQVQALPAGHDDEALHHCRRCAAQLHLRKPDHLARTWALLLAAVVFYIPANILPVMSVS
FT                   SVVGDSAHTILGGVVELWEMGSWDIALIVFVASIMVPLTKLLALSLLALTLQRGSTANL
FT                   RQRTRLYQMVEFIGQWSMLDVFVVIVLAALANFQGLMEISAGSGAASFGMVVILTMMAA
FT                   MSFDPRRSWDLESASAPHVHDALHAHSSAHGAAASDQPST"
FT   misc_feature    join(75139..75207,75295..75363,75424..75483,75511..75579,
FT                   75781..75849,75925..75993,76054..76122,76135..76203)
FT                   /note="8 probable transmembrane helices predicted for
FT                   BB2021 by TMHMM2.0 at aa 44-66, 96-118, 139-158, 168-190,
FT                   258-280, 306-328, 349-371 and 376-398"
FT   CDS             76348..78021
FT                   /transl_table=11
FT                   /locus_tag="BB2022"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2751"
FT                   /db_xref="InterPro:IPR003399"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT2"
FT                   /protein_id="CAE32519.1"
FT                   /translation="MAESTPPPQEPGTPIAAPQIARKQKSRISWIWLVPIVAALAGLSL
FT                   VVRTIMQAGPEITILFDTAEGLEVGKTQVRYKDVNIGVVQGIHFNKDRSKVVVEAELAK
FT                   EVSNLARDGTQFWVVRPRLGISGVSGLGTLLSGAYIGVDAPPDKEGGTDRASKFEFVGL
FT                   EVPPAVTHDRAGKRFMLSATDLGSLDIGSPVYFRRIPVGRVIGYKLDDSGRVVNVEVFV
FT                   DAPNDRFVTDSTRFWNASGVDVAVNASGLKVRTQSLVSLAVGGVAFESVSARQGEPVKA
FT                   DTRFELYESETAAKANPDGQPFPIRMRFDQSIRGLTVGSPIDFQGITLGEVTRIAIDFD
FT                   NAKKRFFAVVDATVYPERIGRVFDEIRARTEASSGSHAAGQLLSIMVKYGLRAQLRTAN
FT                   LLTGQLYIVLDTFPEAPPVAFVPGDDPVIIPTIPGQLDQLQAQISSIVTKIEKIPFDQI
FT                   GTDLRATLASTAKLMNRLDKDLAPEARAVLRQARQSLVDINNMLAPDSGLPANTERAMQ
FT                   EMSRAARSLRNLADYLQTNPEALLKGRGADPIPGAGPVRN"
FT   misc_feature    76432..76500
FT                   /note="1 probable transmembrane helix predicted for BB2022
FT                   by TMHMM2.0 at aa 29-51"
FT   CDS             78026..78694
FT                   /transl_table=11
FT                   /locus_tag="BB2023"
FT                   /product="lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2750"
FT                   /db_xref="InterPro:IPR005586"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT1"
FT                   /protein_id="CAE32520.1"
FT                   /translation="MKSTVARCAPLLIATILAGCGASPPARYYTLQPPGATQAVQAGVA
FT                   PAPFMIEILPVNVPAQADQPQLMVRTGDGTVAPLYSERWSAPLPDEFRAALSDTLTREL
FT                   GAPDVQVIKPASGTPVWRVQVDVQRFDLVAGGPSLLDATWRVRPVNLAAPALVCRTRVD
FT                   VPAGGERDTAALVQAQQRGTALLARTIASAIRSQGQSAEAGGPEVQVLGCSRNDAKTAG
FT                   "
FT   misc_feature    78026..78091
FT                   /note="Signal peptide predicted for BB2023 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.943) with cleavage site
FT                   probability 0.673 between residues 22 and 23"
FT   misc_feature    78053..78085
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    78053..78601
FT                   /note="HMMPfam hit to PF03886, DE Protein of unknown
FT                   function (DUF330), score 5.2e-05"
FT   CDS             78851..82672
FT                   /transl_table=11
FT                   /gene="putA"
FT                   /locus_tag="BB2024"
FT                   /product="bifunctional proline
FT                   oxidoreductase/transcriptional repressor"
FT                   /EC_number="1.5.99.8"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2749"
FT                   /db_xref="GOA:Q7WKT0"
FT                   /db_xref="HSSP:1K87"
FT                   /db_xref="InterPro:IPR016162"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKT0"
FT                   /protein_id="CAE32521.1"
FT                   /translation="MASTTLGVKVDDALRDRLKAAAQKLNCTPHWLHKQAILSYLDRIE
FT                   RGHLPAEMAHLGRDERGEDEDAGASADAMPPFFEFGQDVQPQSVLRAAITAAYRRPEPE
FT                   CVPLLLGQARVAGPEKVHAMASKLVHALRAKRSGGGVEGLIQEFSLSSQEGVALMCLAE
FT                   ALLRIPDRATRDALIRDKIAHGDWRSHMGGSQSLFVNAATWGLMITGKLVAVSSEQSLS
FT                   KALTRLIGKGGEPLVRKGVNMAMRMMGEQFVSGQTISEALANNRKMEARGFRYSYDMLG
FT                   EAATTAADAERYYAAYEQAIHAIGKAAAGRGIYEGPGISIKLSALHPRYARAQRDRVMA
FT                   ELLPRVKALTLLARQYDIGLNIDAEEADRLEISLDLLEALCFVPELDGWNGIGFVIQAY
FT                   QKRAPFVIDYVIDLAKRSRHRLMVRLVKGAYWDTEIKRAQVDGLEGYPVYTRKVYTDVA
FT                   YLACARRLLAAPEATYPQFATHNAYTLSAIYQMAGQNYYPGQYEFQCLHGMGEPLYEEV
FT                   VGPLAQGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNLIGDDSITVEQLVAD
FT                   PVEAASRIVPLGAPHEKIPLPRELYGSVQQGARANSAGLDLTNEHRLGSLSAALLASAA
FT                   IDWRAWPMLGEGDPGWDPAGAVEVANPANLRDIVGHVMQATPQHVEQALRDAANAAPIW
FT                   QSTPVPERAQCLRRAAQLLEEQMQTLLGLIVREAGKSLPNAIAEVREAVDFLRYYADQA
FT                   EREFDNDTHRPLGQVLCISPWNFPLAIFTGQVAAALAAGNTVLAKPAEQTSLIAGQAVA
FT                   ILRAAGVPAGAVQLLPGRGETVGAQLVASPQVRGVMFTGSTEVARIIAGALAERLDDQG
FT                   HTIPLIAETGGQNAMVIDSSALAEQVVFDVLTSAFDSAGQRCSALRVLCLQEDSADHVL
FT                   AMLRGAMRELRVGNPDRLSVDVGPVIDAEARNGIQGHIEAMRSSGRPVDQVELAGECRY
FT                   GTFVPPTLIEIDHIGELTREVFGPVLHVLRYRRDDLDGLIEQINATGYGLTFGVHTRID
FT                   ETIARVTEQVHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYMYRLLATRPAG
FT                   LPPALDPAAPMPQALALPGPTGETNTYRVEPRGAVYCVAATEAGARAQWAVVSQTGNHA
FT                   WFADTPAARAWIAGLDARLREQAALLEDSELDEADFQAVLFEGDGDALRALNMRIAQRP
FT                   GPLVSVHGLSADALAAGASYAPDRLLAERSISVNTAAAGGNASLMTIG"
FT   misc_feature    79511..80551
FT                   /note="HMMPfam hit to PF01619, DE Proline dehydrogenase,
FT                   score 2.3e-164"
FT   misc_feature    80798..82180
FT                   /note="HMMPfam hit to PF00171, DE Aldehyde dehydrogenase
FT                   family, score 6.2e-92"
FT   misc_feature    81566..81601
FT                   /note="PS00070 Aldehyde dehydrogenases cysteine active
FT                   site."
FT   CDS             82925..84070
FT                   /transl_table=11
FT                   /locus_tag="BB2025"
FT                   /product="putative ABC transport solute-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2747"
FT                   /db_xref="GOA:Q7WKS9"
FT                   /db_xref="HSSP:1USG"
FT                   /db_xref="InterPro:IPR000709"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS9"
FT                   /protein_id="CAE32522.1"
FT                   /translation="MTLRTPIKMLAAGIAAACLAGVAQAADIKFGFAAPLTGPQSHYGE
FT                   DMQNGLTLALEEANQKGVTVGGKPAKFVLVSRDDQADPRVAVQVAQQLVDQEVNGILGH
FT                   FNSGTTIPASRVYHDAGLPQIAMATSPEYTNQQYETTFRMMTSDTQQGAAVGKFMVEKL
FT                   NAKKVAIIDDRTAYGQGLADEVEKAVKAAGGQVVRREYTTDKANDFTSILTNIKGVAPD
FT                   AIFYGGLDAQSGPMKRQLATLGLKAPLVSGEMTRSDTFIKLAGDAADGTYASLAGVPLE
FT                   KMAAGKEFAKRYEERFKKAPGVYAPYAYDGAWNMITAIEKAGSADPSKYLPELAKLSRK
FT                   GATSEHIAYDAKGDLKEVAVTIYEVKNGKWEMVETMVSQAN"
FT   misc_feature    82925..82999
FT                   /note="Signal peptide predicted for BB2025 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 25 and 26"
FT   misc_feature    82991..84061
FT                   /note="HMMPfam hit to PF01094, DE Receptor family ligand
FT                   binding region, score 3.7e-05"
FT   CDS             84220..85149
FT                   /transl_table=11
FT                   /locus_tag="BB2026"
FT                   /product="putative ABC transport protein, inner membrane
FT                   component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2746"
FT                   /db_xref="GOA:Q7WKS8"
FT                   /db_xref="InterPro:IPR001851"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS8"
FT                   /protein_id="CAE32523.1"
FT                   /translation="MDIFTQQIINGLTLGSVYALVALGYTMVYGIIGLINFAHGDVVMI
FT                   GAMAATMVAAALVGGDPSTSAFAVLGAGLLVSVPLCMAVGWTAERVAYRPLRRAPRLAA
FT                   LITAIGVSIILQNVAMMVWGRNYLNFPQVLTPAVFEIGGARMSMLQIAIVVIAALIMGA
FT                   LLLVVHKTRLGTAMRATAQNREVAGLMGVNINTVISAAFLIGSALAAIAGMMVTTYYGV
FT                   SQYTMGFMLGLKAFTAAVLGGIGNLVGAMAGGLLLGIIESLGSGYIGDLTGGFLGSHYQ
FT                   DVFAFVVLVMVLIFRPSGLLGERVGDRA"
FT   misc_feature    84229..85134
FT                   /note="HMMPfam hit to PF02653, DE Branched-chain amino acid
FT                   transport system / permease component, score 3.1e-52"
FT   misc_feature    join(84262..84330,84343..84396,84409..84477,84523..84591,
FT                   84655..84723,84784..84852,84865..84918,84931..84999,
FT                   85057..85125)
FT                   /note="9 probable transmembrane helices predicted for
FT                   BB2026 by TMHMM2.0 at aa 15-37, 42-59, 64-86, 102-124,
FT                   146-168, 189-211, 216-233, 238-260 and 280-302"
FT   misc_feature    84649..84696
FT                   /note="PS00038 Myc-type, 'helix-loop-helix' dimerization
FT                   domain signature."
FT   CDS             85146..86234
FT                   /transl_table=11
FT                   /locus_tag="BB2027"
FT                   /product="putative ABC transport protein, ATP-binding
FT                   component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2745"
FT                   /db_xref="GOA:Q7WKS7"
FT                   /db_xref="InterPro:IPR001851"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS7"
FT                   /protein_id="CAE32524.1"
FT                   /translation="MTRQPNKSGLSARNLVGIALIGIVLAVLPFVLGMAGQSWVRILNF
FT                   ALLYVMLALGLNIVVGFAGLLDLGYIAFYAVGAYTWALLASPHFGLHLPFWAILPMALG
FT                   VACVFGVLLGAPTLKLRGDYLAIVTLGFGEIIRIFLNNLNAPVNITNGPQGINRIDAFK
FT                   VGDFVFGRTETILGIRFTGPEKYYYLLVLLTLLIIVVCVRLQNSRIGRAWEAIREDEIA
FT                   AKAMGINSRNIKLLAFAMGASFGGVAGALFAAMQGFVSPESFSLTESISVLCMVVLGGM
FT                   GHIPGVILGAVILAVLPEFLRAVVEPAQHLLFGAVVLDPEGIRMLLFGLAMVCVMLFRP
FT                   AGLWPSAVRKRELSSTRQGGAA"
FT   misc_feature    85146..85250
FT                   /note="Signal peptide predicted for BB2027 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.937) with cleavage site
FT                   probability 0.363 between residues 35 and 36"
FT   misc_feature    join(85182..85250,85260..85328,85347..85400,85428..85496,
FT                   85515..85568,85701..85757,85848..85916,85959..86027,
FT                   86121..86189)
FT                   /note="9 probable transmembrane helices predicted for
FT                   BB2027 by TMHMM2.0 at aa 13-35, 39-61, 68-85, 95-117,
FT                   124-141, 186-204, 235-257, 272-294 and 326-348"
FT   misc_feature    85248..86189
FT                   /note="HMMPfam hit to PF02653, DE Branched-chain amino acid
FT                   transport system / permease component, score 1.4e-41"
FT   CDS             86231..87034
FT                   /transl_table=11
FT                   /locus_tag="BB2028"
FT                   /product="putative ABC transport protein, ATP-binding
FT                   component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2744"
FT                   /db_xref="GOA:Q7WKS6"
FT                   /db_xref="HSSP:1G6H"
FT                   /db_xref="InterPro:IPR018170"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS6"
FT                   /protein_id="CAE32525.1"
FT                   /translation="MSRILHAQGLGKRFGGLRALSEVSFDIEAGEIYGLIGPNGAGKTT
FT                   LFNVLTGLYVPEEGQCEFNGMSLIGKKPHEVAAAGLARTFQNIRLFANLSAIENVMIGR
FT                   HVRTHAGVLGAVLRTRAERAEEAAIERRAQELLEYVGIGHRANDVARSLPYGDQRRLEI
FT                   ARALATDPRLLALDEPAAGMNASETVVLRQLIEKIRTDGVTVLLIEHDMKLVMGLCDRV
FT                   LVLEYGKVLSMGRPAEVQRDPKVIEAYLGAGAAHDPELHTTEQAP"
FT   misc_feature    86318..86914
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   1e-55"
FT   misc_feature    86339..86362
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    86471..86518
FT                   /note="PS00063 Aldo/keto reductase family putative active
FT                   site signature."
FT   CDS             87031..87762
FT                   /transl_table=11
FT                   /locus_tag="BB2029"
FT                   /product="putative ABC transport protein, ATP-binding
FT                   component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2743"
FT                   /db_xref="GOA:Q7WKS5"
FT                   /db_xref="HSSP:1JI0"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS5"
FT                   /protein_id="CAE32526.1"
FT                   /translation="MTASQALLELRGLQVAYGGIRAVRGIDLRVDPGELVCLIGANGAG
FT                   KSTTLRAICGLVPLAGGQVLYDGQSIGGQPSFALVRKGLVMVPEGRGIFGQLTIEENLA
FT                   MGAYVRRDAAQVRQDTERVFTLFPRLAERRRQAAGTLSGGEQQMVAMGRAMIARPRLLL
FT                   LDEPSMGLAPLMVDKVFEVVRTIAAEGVTILLIEQNARLALEHADRGYVMESGEITLSG
FT                   PAREMLHDPKVRAAYLGEVEA"
FT   misc_feature    87127..87678
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   8.5e-48"
FT   misc_feature    87148..87171
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    87451..87495
FT                   /note="PS00211 ABC transporters family signature."
FT   CDS             complement(87820..89109)
FT                   /transl_table=11
FT                   /locus_tag="BB2030"
FT                   /product="Putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2742"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS4"
FT                   /protein_id="CAE32527.1"
FT                   /translation="MSITRLPPPFRHLGQKYAFVVVAVIFFSLLVSAGLRSTPSVLIVP
FT                   LEQAFGWSRSTISLAAAIGIFLYGLAGPFAAAAMEHFGLRRVLIGALLLMAASSAASAF
FT                   MTESWHLLLTWGVFSGIGSGAVAVVLGATIVNRWFTTRRGLMMGLLTASTATGNLLFLP
FT                   VLAALAASGDWTRVVWAVAAGAALMAPLAWWLVPDRPADVGLRSYGSAPDTPEPSVAPR
FT                   TGLLAATFGALRRAARTRTFWYLFATFFVCGFTTNGLVGTHLIALCGDHGIAEVQAAGL
FT                   LALMGIFDLVGTTASGWLTDRYDPRRLLFVYYSLRGLSLMYLPYSDFSFYSLSLFAIFF
FT                   GLDWIATVPPTLRLTTEAFGDRDAPIVFGWIVAGHQLGAASAAWMGGVVRETTGSYLMA
FT                   FVLAGSTGLIAAVIALMINRKPRPTALAEA"
FT   misc_feature    complement(join(87859..87927,87946..88014,88084..88152,
FT                   88213..88281,88309..88377,88522..88581,88609..88677,
FT                   88711..88779,88792..88860,88879..88947,89005..89073))
FT                   /note="11 probable transmembrane helices predicted for
FT                   BB2030 by TMHMM2.0 at aa 13-35, 55-77, 84-106, 111-133,
FT                   145-167, 177-196, 245-267, 277-299, 320-342, 366-388 and
FT                   395-417"
FT   misc_feature    complement(89011..89109)
FT                   /note="Signal peptide predicted for BB2030 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.873) with cleavage site
FT                   probability 0.731 between residues 33 and 34"
FT   CDS             89206..89808
FT                   /transl_table=11
FT                   /locus_tag="BB2031"
FT                   /product="putative TetR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2741"
FT                   /db_xref="GOA:Q7WKS3"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS3"
FT                   /protein_id="CAE32528.1"
FT                   /translation="MSRKSAPSSTAAPAPKLAADRIRATARELFYREGIRAVGVDAIVS
FT                   AAGVTKPSLYRSFSSKDELAASYLRDYEAEFWSRFDAGAQRYPDDPRAQLRLYLESLAR
FT                   RAVAAGPYRGCGLSNAAVEYPDPDHPARLVAEAHKRELRKRLVEMARRMGAREPEILGD
FT                   GLMLLIEGAFISGQLFHGDGPARHVALLADRLIEASL"
FT   misc_feature    89206..89259
FT                   /note="Signal peptide predicted for BB2031 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.877) with cleavage site
FT                   probability 0.766 between residues 18 and 19"
FT   misc_feature    89269..89409
FT                   /note="HMMPfam hit to PF00440, DE Bacterial regulatory
FT                   proteins, tetR family, score 7.4e-15"
FT   CDS             90041..93022
FT                   /transl_table=11
FT                   /gene="bapC"
FT                   /locus_tag="BB2033"
FT                   /product="putative autotransporter"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2738"
FT                   /note="bapc seems to undergo phase variation at a poly C"
FT                   /db_xref="GOA:Q7WKS2"
FT                   /db_xref="HSSP:1DAB"
FT                   /db_xref="InterPro:IPR003992"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS2"
FT                   /protein_id="CAE32529.1"
FT                   /translation="MNDRKSNSVSPVARYLRFGVAAVAGVAAGALPSPDVDAQAAPAAA
FT                   AAAKIEALSDTDIYSDYEHGIVMAPDNKDYISYKPAEGGPEAPPPPPPPPPPPFKPAPY
FT                   VSLGNDVVAERIRVDVRGDETLGVYVDSEHRSLTVRDSRIDAYGKPPSIESPNYYGAAA
FT                   VYAGTLNIENSTVRHNYAAQPFEDAVGVGVTALGEKAILNVTDSEVSGTRGAVIGWGGE
FT                   ATFTNSVLRGSAFGLYAEMCDTCRDDDGTSPSIRVRGGVVQGGVGANNVAVVATGPGKV
FT                   AIENAELLGASGMYATFGAQVDMKGGRILAHNTNVIGSQDYADGPYGGVVLTEDGQVNL
FT                   EDVKVSATGLGAAGLWLLGDKDTSPRANLRNTDVHGEVAAIALGFNGEANISGGSLSVE
FT                   DGAVLTTLTPDAVEYYYDYALSMEHPAADAPLTPVRVTLSDGARASGETLIAHGGLLPM
FT                   TLRLSSGADARGDIVTLPPSAPPDSAEQPDAEPRPDAAAQSDAKAKARVMAQVDGGEPV
FT                   AVPIPASSHPDAPIDVFIDSGAQWRGITNTVNALRIEDGTWTVTGSSAVNSLHLQAGKV
FT                   AYATPAESDGKFKHLRVKTLSGSGLFEMNASADLSDGDLLVVSDEASGQHKVLVRGAGT
FT                   EPTGVESLTLVELPKGSQAGFTLANRGGVVDAGAFRYRLTPDNGVWGLERTSQLSAVAN
FT                   AALNTGGVGAASSIWYAEGNALSKRLGELRLDPGAGGFWGRTFAQKQQLDNKAGRRFDQ
FT                   KVYGFELGADHAIAGQQGRWHVGGLLGYTRARRSFVDDGAGHTDSAHIGAYAAYVADNG
FT                   FYFDSTLRASRFENDFTVTATDAVSIRGKYRANGVGATLEAGKRFTLHDGWFVEPQSEV
FT                   SLFHASGGTYRAANNLSVKDEGGTSAVLRLGLAAGRRIELGKDRVIQPYATLSWLQEFK
FT                   GVTTVRTNGYGLRTDLGGGRAELALGLAAALGRGHKFYTSYEYAKGNKLTLPWTFHLGY
FT                   RYAW"
FT   misc_feature    90041..90175
FT                   /note="Signal peptide predicted for BB2033 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.952) with cleavage site
FT                   probability 0.375 between residues 45 and 46"
FT   variation       90300..90334
FT                   /note="phase variable poly C"
FT   misc_feature    90352..90360
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="PS00294 Prenyl group binding site (CAAX box)."
FT   misc_feature    90959..90982
FT                   /note="PS00881 Protein splicing signature."
FT   misc_feature    91736..92095
FT                   /note="HMMPfam hit to PF03212, DE Pertactin, score 2e-69"
FT   misc_feature    92186..93016
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF03797, DE Autotransporter
FT                   beta-domain, score 8.2e-82"
FT   CDS             complement(93085..94323)
FT                   /transl_table=11
FT                   /gene="amtB"
FT                   /locus_tag="BB2034"
FT                   /product="probable ammonium transporter"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2737"
FT                   /db_xref="GOA:Q7WKS1"
FT                   /db_xref="InterPro:IPR018047"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS1"
FT                   /protein_id="CAE32530.1"
FT                   /translation="MDKADISWLLVSTLLVLMMAVPGLALFYGGLVRSKNVLSVLLQVL
FT                   CTFALGLLLWFAYGYSLAFTEGNAFFGGLSRTFFSGMFTPADGTYTLSGTLTELLFASF
FT                   QATFAGITCALIVGSFAERARFSAVLVFTVIWFTFAYIPIAHMVWFASETAPGLLNARG
FT                   ALDFAGGTVVHINAGVAGLVGAYVVGRRIGYGREAMQPHNLPMTFIGAALLWVGWFGFN
FT                   AGSSLAASDGATLAFFNTMIATAGAVLGWLFTEWAVKGKPSMLGAASGAVAGLVGITPA
FT                   AGLVGPVGALVIGVTAGVVCVWGVNGLKRLLRADDALDVFGVHGVGGIVGALLTGVFNA
FT                   KVLGGPGLDSAGAIAGQVWVQLEGVLLTIVWSAVVAWIAYKIADKLCGLRVPEDQEREG
FT                   LDVTSHGESAYHS"
FT   misc_feature    complement(93094..94305)
FT                   /note="HMMPfam hit to PF00909, DE Ammonium Transporter
FT                   Family, score 5.3e-159"
FT   misc_feature    complement(join(93184..93252,93310..93366,93403..93462,
FT                   93472..93531,93550..93618,93661..93720,93757..93816,
FT                   93874..93942,93961..94029,94147..94215,94228..94296))
FT                   /note="11 probable transmembrane helices predicted for
FT                   BB2034 by TMHMM2.0 at aa 10-32, 37-59, 99-121, 128-150,
FT                   170-189, 202-221, 236-258, 265-284, 288-307, 320-338 and
FT                   358-380"
FT   misc_feature    complement(93751..93828)
FT                   /note="PS01219 Ammonium transporters signature."
FT   misc_feature    complement(94249..94323)
FT                   /note="Signal peptide predicted for BB2034 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.697) with cleavage site
FT                   probability 0.630 between residues 25 and 26"
FT   CDS             complement(94349..94687)
FT                   /transl_table=11
FT                   /locus_tag="BB2035"
FT                   /product="nitrogen regulatory protein P-II"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2736"
FT                   /db_xref="GOA:Q7WKS0"
FT                   /db_xref="HSSP:1GNK"
FT                   /db_xref="InterPro:IPR015867"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKS0"
FT                   /protein_id="CAE32531.1"
FT                   /translation="MKLVIAIIKPFKLDEVRMALSDIGVQGLTVTEVKGFGRQKGHTEL
FT                   YRGAEYAVDFLPKLRVEAAVPDHLVDQVIEAIEQSARTGKIGDGKIFTAPLEEVIRIRT
FT                   GESGEAAL"
FT   misc_feature    complement(94355..94687)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00543, DE Nitrogen regulatory
FT                   protein P-II, score 1.5e-58"
FT   misc_feature    complement(94535..94552)
FT                   /note="PS00496 P-II protein urydylation site."
FT   CDS             95357..95662
FT                   /transl_table=11
FT                   /locus_tag="BB2036"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2735"
FT                   /db_xref="InterPro:IPR007475"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKR9"
FT                   /protein_id="CAE32532.1"
FT                   /translation="MRSSNNRHEGEEAMNRTQQWMEDLQKNISDLIARSPAADVERNVR
FT                   AMMTQTFARLDLITREEFEVQVDLLARARTRVDQLSAQVQQLEARLAALEAGKPQA"
FT   CDS             95769..97271
FT                   /transl_table=11
FT                   /locus_tag="BB2037"
FT                   /product="putative chelatase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2734"
FT                   /db_xref="GOA:Q7WKR8"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKR8"
FT                   /protein_id="CAE32533.1"
FT                   /translation="MTLAVLASRAIAGWQAPAVRVETHLGSGLPAFAIVGLPDVEVRES
FT                   RERVRAAIQNSGFDFPPGRITVNLSPADLPKASARFDLPIALGILLASGQVAASAAQTA
FT                   ALPDCVWAAELSLSGALVPLAAPLALALAVAREQPGATLVLPAGSAAVAAWVPGIRVLA
FT                   AHTLGEAAAYLAGHAELAPAERRSWPEAEPGPCLSDVRGQPAARRALEVAAAGGHSLLM
FT                   CGPPGAGKSMLAQRLPGLLPPLEQRQALEVAAIAGAGGAPEVLRGQPPFRAPHHSASAA
FT                   ALVGGGARPRPGEISLAHHGVLFLDELPEFERRALESLREPLETGKVVISRALHSVEYP
FT                   AVFQLVAAMNPCPCGWRGHASKACRCTPDQVRRYAARVSGPLVDRIDLWIELPATEPQW
FT                   LAEPPGEPSLPVRERVARCRQRQLARQGCLNAKLSGPALDAHCALGAAARTLLQQAMRR
FT                   LGGSARAAHRALRVARTLADLAHEPEIGAAHIAEAVQYRRPT"
FT   CDS             97607..97804
FT                   /transl_table=11
FT                   /gene="rpmI"
FT                   /locus_tag="BB2038"
FT                   /product="50s ribosomal protein l35"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2576"
FT                   /db_xref="GOA:Q7WKR7"
FT                   /db_xref="InterPro:IPR018265"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKR7"
FT                   /protein_id="CAE32534.1"
FT                   /translation="MPKMKTKKSAAKRFKVRGSGSIKRGQAFKRHILTKKTTKNKRQLR
FT                   GSAAVHETNVASVKAMMPFA"
FT   misc_feature    97616..97651
FT                   /note="PS00936 Ribosomal protein L35 signature."
FT   misc_feature    97616..97792
FT                   /note="HMMPfam hit to PF01632, DE Ribosomal protein L35,
FT                   score 2e-27"
FT   CDS             97820..98179
FT                   /transl_table=11
FT                   /gene="rplT"
FT                   /locus_tag="BB2039"
FT                   /product="50s ribosomal protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2575"
FT                   /db_xref="GOA:Q7WKR6"
FT                   /db_xref="InterPro:IPR005812"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKR6"
FT                   /protein_id="CAE32535.1"
FT                   /translation="MPRVKRGVTARARHKKVIAAAKGYRGRRGNVFRIAKQAVMRAGQY
FT                   AYRDRRNKKRTFRALWITRINAAVREQGMSYSVFIAGLKKAAIELDRKVLADLAVRDKA
FT                   GFAAIVQQAKAALAA"
FT   misc_feature    97823..98146
FT                   /note="HMMPfam hit to PF00453, DE Ribosomal protein L20,
FT                   score 4.4e-56"
FT   misc_feature    97979..98029
FT                   /note="PS00937 Ribosomal protein L20 signature."
FT   CDS             98230..99276
FT                   /transl_table=11
FT                   /gene="pheS"
FT                   /locus_tag="BB2040"
FT                   /product="phenylalanyl-tRNA synthetase alpha chain"
FT                   /EC_number="6.1.1.20"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2574"
FT                   /db_xref="GOA:Q7WKR5"
FT                   /db_xref="InterPro:IPR004188"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKR5"
FT                   /protein_id="CAE32536.1"
FT                   /translation="MRFEGSNSMTLLVDDLVSQAQERFAAASDAAALENAKARFLGKEG
FT                   ALTVLLKALGKLDPEQKREMGARINQAKQQIEALLNARRAALAQAELDARLASETIDVT
FT                   LPGRGKAAGGIHPVIRTWERVEEIFRSIGFDVADGPEVENDWTNFTALNNPLDHPARSM
FT                   QDTFYVDMHDADGLPLLLRTHTSPMQVRYARMHKPPIKVIAPGRTYRVDSDATHSPMFH
FT                   QVEGLWIAEDISFADLKGVYTDFLRCFFESDDLVVRFRPSFFPFTEPSAEIDMMFTSGP
FT                   NRGRWLEISGSGQVHPQVVRNFGLDPERYIGFAFGSGLERLTMLRYGVNDLRQFYEGDL
FT                   RFLRQFNE"
FT   misc_feature    98293..98520
FT                   /note="HMMPfam hit to PF02912, DE Aminoacyl tRNA synthetase
FT                   class II, N-terminal domain, score 1.4e-23"
FT   misc_feature    98578..99228
FT                   /note="HMMPfam hit to PF01409, DE tRNA synthetases class II
FT                   core domain (F), score 7.4e-106"
FT   misc_feature    98854..98904
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1."
FT   misc_feature    99175..99204
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT   CDS             99289..101706
FT                   /transl_table=11
FT                   /gene="pheT"
FT                   /locus_tag="BB2041"
FT                   /product="phenylalanyl-tRNA synthetase beta chain"
FT                   /EC_number="6.1.1.20"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2573"
FT                   /db_xref="GOA:Q7WKR4"
FT                   /db_xref="InterPro:IPR002547"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKR4"
FT                   /protein_id="CAE32537.1"
FT                   /translation="MQFPESWLRSLVNPSIGTDELAHRLTMAGLEVEETEPAAPPFTGV
FT                   VVAHIVDIAPHPDADKLRVCQVDDGSGALLQIVCGAPNAAAGLTVPLARVGAELPGGMK
FT                   IGVAKMRGVQSSGMLCSARELGLSQDHAGLLELPAALRPGTDIRAALDLDDTLFTLKLT
FT                   PNRADCLSILGVAREVAALTGTPLTAPAAEPVPVTIDHRLPVAIQAPDLCGRFAGRVIQ
FT                   GVNARAATPEWMKTRLERAGQRSVSALVDISNYVMLEVGRPSHVFDLDKIGGDLSVRWA
FT                   REGETLELLNGQAVALDPKVGVVVAGEQVESLAGIMGGEATSVTLDTRNIYLEAAFWWP
FT                   GAIAGRARRYKFSSEASHRFERGVDYASIPEHIELITRLILDICGGQAGPVDDQCVNLP
FT                   VREPVRMRLARCHRVLGVAVERAEVAQIFTRLGLPFQEQGDDFVVTPPSYRFDIEIEED
FT                   LIEEVARVYGFERIPDVPPVARAKMHAQPEARRGAHAVRRLVAARDYQEVVNYSFVEAA
FT                   WERDYAGNDNPVRLVNPIASHLSVMRSSLIAGLVAIVRHNANRKQSRVRLFELGRVFHR
FT                   DPQLADGPLEVAGVRQPLMLAGVAWGGAVEEQWGVPHRQVDFYDVKQDVEALFGARADA
FT                   LRFVADRYPALHPGRSARIELDGQPIGWLGELHPQWTQQADLHHAPVVFELDFEALAER
FT                   RLPAVRELSRQPAVVRDLALWVDAKLPAQAMLDTVAAAIARDPQLSVVQDAQVFDVWRE
FT                   KPVAGQTVTEKSLAFRFWLQDTEVTLDEARVADCIARIKDALVAAHNARQRA"
FT   misc_feature    99421..99726
FT                   /note="HMMPfam hit to PF01588, DE Putative tRNA binding
FT                   domain, score 3.2e-34"
FT   misc_feature    99733..100173
FT                   /note="HMMPfam hit to PF03483, DE B3/4 domain, score
FT                   4.2e-66"
FT   misc_feature    100489..100695
FT                   /note="HMMPfam hit to PF03484, DE tRNA synthetase B5
FT                   domain, score 1.4e-23"
FT   misc_feature    101395..101700
FT                   /note="HMMPfam hit to PF03147, DE Ferredoxin-fold anticodon
FT                   binding domain, score 2.1e-05"
FT   CDS             101712..102053
FT                   /transl_table=11
FT                   /gene="ihfA"
FT                   /locus_tag="BB2042"
FT                   /product="integration host factor alpha-subunit"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2572"
FT                   /db_xref="GOA:Q7WKR3"
FT                   /db_xref="HSSP:1IHF"
FT                   /db_xref="InterPro:IPR005684"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKR3"
FT                   /protein_id="CAE32538.1"
FT                   /translation="MGTTMLAEPRTLTKAELAELLFERVGLNKREAKDIVDTFFEEIRD
FT                   ALARGDSVKLSGFGNFQVRDKPPRPGRNPKTGETIPIAARRVVTFHASQKLKSVVEQPS
FT                   SPPDPASAE"
FT   misc_feature    101745..102014
FT                   /note="HMMPfam hit to PF00216, DE Bacterial DNA-binding
FT                   protein, score 6.1e-48"
FT   misc_feature    101880..101939
FT                   /note="PS00045 Bacterial histone-like DNA-binding proteins
FT                   signature."
FT   CDS             102112..102522
FT                   /transl_table=11
FT                   /locus_tag="BB2043"
FT                   /product="putative MerR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2571"
FT                   /db_xref="GOA:Q7WKR2"
FT                   /db_xref="InterPro:IPR000551"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKR2"
FT                   /protein_id="CAE32539.1"
FT                   /translation="MTRTEPTVTTLPPIPAKRYFTIGEVSDLCGVKPHVLRYWEQEFTQ
FT                   LKPVKRRGNRRYYQHHEVLLIRRIRSLLYEQGFTISGARNRLGDARDAAHDAEAAVRLS
FT                   AGELQALRNELGDISSMLGEALGGQSENAANA"
FT   misc_feature    102169..102234
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1691.000, SD 4.95 at aa 20-41, sequence
FT                   FTIGEVSDLCGVKPHVLRYWEQ"
FT   misc_feature    102178..102285
FT                   /note="HMMPfam hit to PF00376, DE Bacterial regulatory
FT                   proteins, merR family, score 0.00044"
FT   tRNA            102695..102771
FT                   /note="tRNA Pro anticodon GGG, Cove score 77.19"
FT   CDS             complement(102918..104009)
FT                   /transl_table=11
FT                   /locus_tag="BB2044"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2570"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKR1"
FT                   /protein_id="CAE32540.1"
FT                   /translation="MLRGMKKSTCFAVYLVATALVVIIALAWPSFPTRLISVHFADGRL
FT                   EVNLNSDAEFSYAILADVPSSIDATALESLSLKPSKEGSIVLPAPEPANREYSIIVIKG
FT                   KDWFELVRQPEAWLRAKFRFEQRGGYTVLGRRTINIDTESTYSPRPLVLSHTPRLQIGQ
FT                   VDSFPYPAIGIAVALLEFLWEKPVMQGPTTLSYREFVKQPLTEKLRAVQEGRFSVQCAG
FT                   FRELFVHASTGIKGLKVRPVDAYGSDPQLPGLTSYSHAATEIWVEQLNKWVLFDPWNGI
FT                   FVERDGIPVSANEMSTYGADQLSIVPVMESIPRFHVDAHGQTQKVDYDPNSLSLTSFTC
FT                   VDAGCQPGYQLYFKIIRLRDVHL"
FT   misc_feature    complement(103929..104009)
FT                   /note="Signal peptide predicted for BB2044 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.876) with cleavage site
FT                   probability 0.749 between residues 27 and 28"
FT   CDS             104193..104789
FT                   /transl_table=11
FT                   /locus_tag="BB2045"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2569"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKR0"
FT                   /protein_id="CAE32541.1"
FT                   /translation="MMIENLPRMRRAGWAAAAIAVAGLAFTGCTTTTPNNQAAAADQRN
FT                   EINAGADATLSKLYTASPQAKDLVQRARGVLVFPSVMGASFIVGGEHGKGVLRTGGKNA
FT                   GYYSTTSGSVGLQAGAQSRAYVLLFMTDEALAQFRQSSGWTAGADASVAVATIGANGRI
FT                   DTNTAKQPIVGFVLNNAGLMAGVSIEGAKINKLDL"
FT   misc_feature    104193..104312
FT                   /note="Signal peptide predicted for BB2045 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.633 between residues 40 and 41"
FT   misc_feature    104247..104279
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(105328..106041)
FT                   /transl_table=11
FT                   /locus_tag="BB2046"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2583"
FT                   /db_xref="GOA:Q7WKQ9"
FT                   /db_xref="InterPro:IPR013216"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ9"
FT                   /protein_id="CAE32542.1"
FT                   /translation="MAPSSHEWTDTLKDVYTARAANADLNARYIPLLPVNQRIQHERDR
FT                   ALAYMLRQHLSVPPAQARVLEVGCGSGSNLLDLIRLGFDPANLMGNDLMDSRVEQARHR
FT                   LPQAVPILAGNALDLDLEREGFDVLYQSTVFTSILDAQARRDLAQRMWHWTKPGGGVLW
FT                   YDFAYNNPRNPNVRGVPLREVRALFPHARIHTARITLAPPLARRLPATLYAPVNSLCPF
FT                   LRTHLLCWIGKPAAP"
FT   CDS             complement(106164..106637)
FT                   /transl_table=11
FT                   /locus_tag="BB2047"
FT                   /product="putative acetyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2584"
FT                   /db_xref="GOA:Q7WKQ8"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ8"
FT                   /protein_id="CAE32543.1"
FT                   /translation="MAPRDLLIRPVRPGDEPRWRELWDGYTRFYEREPVEAVTRHTWRR
FT                   IMDPAQAVYAIVAESATHGVLGIANYLLHENTSTLAPVCYLQDLYVDPQARAQGAGRRM
FT                   LDWLVDEARTRGWSRLYWNTRENNYRARALYDQYTPHSGFVRYVVHTSPHKPA"
FT   misc_feature    complement(106215..106469)
FT                   /note="HMMPfam hit to PF00583, DE Acetyltransferase (GNAT)
FT                   family, score 2.3e-11"
FT   CDS             complement(106640..107017)
FT                   /transl_table=11
FT                   /locus_tag="BB2048"
FT                   /product="putative exported protein"
FT                   /db_xref="InterPro:IPR009468"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ7"
FT                   /protein_id="CAE32544.1"
FT                   /translation="MSRLVWAATILACGQALAQPPAPLTGCAAKQDRIETELAQARAHG
FT                   NTGRIKGLEEALAGARHCDDASLRADRERDVRDATDKVAERQRELDEERQEGDADDIAK
FT                   AERKLREAQQDLDNARAELTR"
FT   misc_feature    complement(106964..107017)
FT                   /note="Signal peptide predicted for BB2048 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 1.000 between residues 18 and 19"
FT   CDS             107142..108059
FT                   /transl_table=11
FT                   /locus_tag="BB2049"
FT                   /product="Putative beta-lactamase"
FT                   /db_xref="GOA:Q7WKQ6"
FT                   /db_xref="HSSP:1ONG"
FT                   /db_xref="InterPro:IPR001466"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ6"
FT                   /protein_id="CAE32545.1"
FT                   /translation="MNRRGFGAGMLAALGAACMPPWARAGMRRAARPADAAAQAQRQLA
FT                   LLEQRHGVRLGVQVHDRDSDRAFSHRADERFPMCSTFKLLAAGAVLARADRGDDSLRRL
FT                   IRYGAADIVAYSPVTGPRQAEGMTLEQLCEAAVTRSDNTAGNLLLSTLGGPPGLTAYAR
FT                   GLGDRMTRLDRIETALNEARPGDPRDTTTPAAMAGNLQRLLLGDALQSASRQRLADWLL
FT                   ASQTGDTRLRAGLPAGWRIGDKTGAGGHGTNNDIGVIWPRDGAPVLISAYLTQSSASRE
FT                   AQNAVLAEVGRIAAHAVAAWRLGS"
FT   misc_feature    107142..107249
FT                   /note="Signal peptide predicted for BB2049 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.992) with cleavage site
FT                   probability 0.367 between residues 36 and 37"
FT   misc_feature    107163..107195
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    107262..108038
FT                   /note="HMMPfam hit to PF00144, DE Beta-lactamase, score
FT                   3.4e-110"
FT   misc_feature    107367..107414
FT                   /note="PS00146 Beta-lactamase class-A active site."
FT   CDS             complement(108074..108427)
FT                   /transl_table=11
FT                   /locus_tag="BB2050"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ5"
FT                   /protein_id="CAE32546.1"
FT                   /translation="MGTATNPQSPARPDAPMPLRLLAPMLVLFLAACSSMSEVTPVAKN
FT                   QYTVSYNAGMKAATWVEIKNQARERARQYCEAQGRKFARPEITSNHATGLMPKKAVVTF
FT                   YCDEKPQPPAEKN"
FT   misc_feature    complement(108329..108361)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(108445..108963)
FT                   /transl_table=11
FT                   /locus_tag="BB2051"
FT                   /product="Putative regulatory protein"
FT                   /db_xref="GOA:Q7WKQ4"
FT                   /db_xref="InterPro:IPR019888"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ4"
FT                   /protein_id="CAE32547.1"
FT                   /translation="MTPPPAALYRAPDRNRPAPAMDPRLDAIDRQLLSLLQANAREPAA
FT                   TLARKLHLARSTVVARIARLERDGVIAGYGVRLGQRLEEAAVRAYCFLSVLPKTPAAVM
FT                   RELARIPEVEEISSVSGAFDYLVFLRCETHEQLDDLLDHIGLIDGVKQTQTSIVLSRRL
FT                   DRRSAIAPG"
FT   misc_feature    complement(108520..108819)
FT                   /note="HMMPfam hit to PF01037, DE AsnC family, score
FT                   4.3e-06"
FT   misc_feature    complement(108775..108840)
FT                   /note="Predicted helix-turn-helix motif with score 985.000,
FT                   SD 2.54 at aa 42-63, sequence EPAATLARKLHLARSTVVARIA"
FT   CDS             complement(108974..109576)
FT                   /transl_table=11
FT                   /locus_tag="BB2052"
FT                   /product="Hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ3"
FT                   /protein_id="CAE32548.1"
FT                   /translation="MKTIRNYAPPSPAALRRLQETLHYSTAQMNQLAGLDDQTPWPRYV
FT                   DGAEPHALGRQRLLYMAARLALPEAQWRLVLERMRNIGARFDYDDGEPLPAPGAVAPEP
FT                   VTEVKFGITLSSLSGAFHEMEQLREFAHFAHEAGVDTLVARAWFGRDDDICRFEPRHAT
FT                   PAVDGQQDRLFEAAARAIGHFEFGGRIYQGGLPTEPD"
FT   CDS             109680..109961
FT                   /transl_table=11
FT                   /locus_tag="BB2053"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2581"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ2"
FT                   /protein_id="CAE32549.1"
FT                   /translation="MRPRKFCDIEGDMDIQEQIAVIVHTVSHQGGRIDALHSTLASVLH
FT                   LVKGSPGLREAIEAHLEQSYANLLARSENPQYVAGFESVRDTVVAALK"
FT   CDS             complement(110076..111689)
FT                   /transl_table=11
FT                   /locus_tag="BB2054"
FT                   /product="putative GntR-family regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2580"
FT                   /db_xref="GOA:Q7WKQ1"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ1"
FT                   /protein_id="CAE32550.1"
FT                   /translation="MTASYDIGRQVFRLPVRAAPQQAQQQAVCIDTDLEIELCYGCFSP
FT                   QLCLLRPALPMHHRAMNTQPLYLRLADHYRRAILTGVLAPAQRMPSVRNLVRAHHVSLS
FT                   TALQACRQLEDDGLIEARPRSGYFVLRPRRPALAPVPEPDIKGALDPAQYVGIHDRVSD
FT                   FIASCQQHPLSADFALAAAPPQAYPMRALQLALTRAARHTPELLTAPVPPYGHPEFRAV
FT                   LARRAMECGISAAPDEVLVTHGCIEALNLALRAVARPGDTIAVESPTYFGLLQILESLG
FT                   LRALEIPTSPQRGISIEALELALQTHANVRAVVVVPNFQNPLSCVMDDSDKARLVTLCE
FT                   RTGIALIEDDTYGALGDHGTPLALKSWDDSGNVIYCASLHKTLAPGMRLGWMLGGRWSR
FT                   RIGMLKFAQSRPNPPLPQAAAADYMGTKAYDRHLARLRQTLRVQREAMAAAVARHFPDG
FT                   TRLSVPTGGMLLWVELPACMPAMRVFEQALRAGIRITPGPMFSNSNRYDHFLRISCGVP
FT                   YTADIAAAMKRLADIVAAGL"
FT   misc_feature    complement(110091..111002)
FT                   /note="HMMPfam hit to PF00155, DE Aminotransferase class I
FT                   and II, score 3.4e-07"
FT   misc_feature    complement(111303..111482)
FT                   /note="HMMPfam hit to PF00392, DE Bacterial regulatory
FT                   proteins, gntR family, score 7e-08"
FT   tRNA            112048..112124
FT                   /note="tRNA Met anticodon CAT, Cove score 85.01"
FT   CDS             112274..112606
FT                   /transl_table=11
FT                   /locus_tag="BB2055"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2567"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKQ0"
FT                   /protein_id="CAE32551.1"
FT                   /translation="MGTAKYDHPGYLADAGAAGTYHVGVWCPHGYPAHVHIGRAGSQDD
FT                   ARLRLRIPDGVFQSMPDDMETLCRRAFGQALAEGLLAASEGDFQEVRLRLDAQPWNGPL
FT                   AAAQPA"
FT   CDS             complement(112748..113488)
FT                   /transl_table=11
FT                   /locus_tag="BB2056"
FT                   /product="putative exported endonulease"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2566"
FT                   /db_xref="GOA:Q7WKP9"
FT                   /db_xref="HSSP:1OUP"
FT                   /db_xref="InterPro:IPR007346"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP9"
FT                   /protein_id="CAE32552.1"
FT                   /translation="MKYAVVLAALLSLPPAAQAELVTRPNAVGHRDFRHAKKVLPRVYQ
FT                   NLERDFYCGCPYQDKRIDLQACGYEPRKQPRRAQQLEWEHVVPAWTLGHQRQCWQQRVN
FT                   GKPGGRKHCSRTDPSFARAEGDLVNLVPSVGEVNGDRQNFRYAVWADRPAPMYGQCETI
FT                   VDFKTRRIQPRKYVRGRIARIQFYMVERYRLKLSREDRRVLCVWARAYPVDDWERARDQ
FT                   RIRTLQGNGNHYVTDPAAIQRQCG"
FT   misc_feature    complement(113432..113488)
FT                   /note="Signal peptide predicted for BB2056 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.994 between residues 19 and 20"
FT   CDS             113664..113795
FT                   /transl_table=11
FT                   /gene="ecnA2"
FT                   /locus_tag="BB2057"
FT                   /product="entericidin A anti-toxin precursor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2565"
FT                   /db_xref="GOA:Q7WKP8"
FT                   /db_xref="InterPro:IPR012556"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP8"
FT                   /protein_id="CAE32553.1"
FT                   /translation="MKNKALIAVLLAMAALSAGCNTVAGAGKDIERGGEKIQGAAQK"
FT   misc_feature    113664..113738
FT                   /note="Signal peptide predicted for BB2057 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.464 between residues 25 and 26"
FT   misc_feature    113676..113744
FT                   /note="1 probable transmembrane helix predicted for BB2057
FT                   by TMHMM2.0 at aa 5-27"
FT   misc_feature    113691..113723
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             113921..114355
FT                   /transl_table=11
FT                   /locus_tag="BB2058"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2564"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP7"
FT                   /protein_id="CAE32554.1"
FT                   /translation="MRRVGLTGALLAAGVLSGCASQGLLSGDTPGLSESFIVTADFQAA
FT                   YRRAGEYVRVCHEQRPHPYGVVYQSSRRLGDRGAPNEVHVFKREEPTKILEIIQSQTET
FT                   PSTARVTVRVLGDGKWDAAEIAAAKASIQSATPVCRQGGD"
FT   misc_feature    113945..113977
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             114357..114773
FT                   /transl_table=11
FT                   /locus_tag="BB2059"
FT                   /product="putative integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2563"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP6"
FT                   /protein_id="CAE32555.1"
FT                   /translation="MGEGADYRPGDNGQGLLAGPLRLLAGLNGLAALMLVAFSLGIVGG
FT                   EVAPPALQAPLALFLAGLAAAMGAMLFGTAARYLQHRQAAAAGVRGRGHLPAVVLAVAL
FT                   YLASVAAFGAGCWLAVAPADTDYDQLPTVYAARV"
FT   misc_feature    join(114414..114482,114525..114593,114651..114719)
FT                   /note="3 probable transmembrane helices predicted for
FT                   BB2059 by TMHMM2.0 at aa 20-42, 57-79 and 99-121"
FT   CDS             114838..116175
FT                   /transl_table=11
FT                   /gene="pyrB"
FT                   /locus_tag="BB2060"
FT                   /product="aspartate transcarbamoylase"
FT                   /EC_number="2.1.3.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2562"
FT                   /db_xref="GOA:Q7WKP5"
FT                   /db_xref="HSSP:1GQ3"
FT                   /db_xref="InterPro:IPR006131"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP5"
FT                   /protein_id="CAE32556.1"
FT                   /translation="MRIAYISYSSLGPPMSISQQAFLRDAMRRLNLTRDVFAGRIGVKR
FT                   RALDTWLLPEGSQEFRAMPEVVERFVSEIVQNRDLLEKYTQSGQVGPLRDRIAVEGRHQ
FT                   LLSVDQFTRESVEDLFRVADMMQPIARRQKVSRVLEGAVLGNLFFEASTRTRVSFGAAF
FT                   CRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDAMVIRHPEQGSVAEFAEATNIPV
FT                   VNGGDGPGEHPSQALLDLYTILTEFSRLGKLLDGAHIAMVGDLKYGRTVHSLIKLLALY
FT                   KGVKFTLISPQGLEMPGYIVEQASRNGNVIEQKSTLAEGLAGADVIYATRVQKERFANE
FT                   EAGEGYTADFQVSRAIIDAYCGPDTIVMHPLPRDSRPGSNDLSTDLNHDPRLAIFRQTD
FT                   NGIPIRMAIFAVLLGVEGLVQHSMRDVTWQHPSHIGPDDSVFHGLD"
FT   misc_feature    115141..115578
FT                   /note="HMMPfam hit to PF02729, DE Aspartate/ornithine
FT                   carbamoyltransferase, carbamoyl-P binding domain, score
FT                   2.8e-48"
FT   misc_feature    115279..115302
FT                   /note="PS00097 Aspartate and ornithine
FT                   carbamoyltransferases signature."
FT   misc_feature    115597..116076
FT                   /note="HMMPfam hit to PF00185, DE Aspartate/ornithine
FT                   carbamoyltransferase, Asp/Orn binding domain, score
FT                   1.8e-40"
FT   CDS             complement(116215..117114)
FT                   /transl_table=11
FT                   /locus_tag="BB2061"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2561"
FT                   /db_xref="GOA:Q7WKP4"
FT                   /db_xref="InterPro:IPR007476"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKP4"
FT                   /protein_id="CAE32557.1"
FT                   /translation="MWFKNLKIYRLSAPWALNGDQLEECLARFAYQGGNNLEMQSLGWI
FT                   SPRENGLLAHTLNGQILLTLRAEKKLLPTTVVNQVAKARAQEIEEQQGYKPGRKQMKEI
FT                   KERVTDELLPKAFSIYRDTRVWIDTVNHWLVIDAAASAKADEVIGLLVKTIDPLPLDNL
FT                   YVEQSPAAAMTGWLAADEAPANFSIDQDTELRASGESRAAIRYVKHSIDVDDVRRHIQS
FT                   GKQCTRLAMTWADRVSFVLTESLDVKRVAPLDVLKENPDAATQNDDEKFDSDMTLMTGE
FT                   VAKLLAELVDSLGGEKRV"
FT   CDS             117268..117486
FT                   /transl_table=11
FT                   /locus_tag="BB2062"
FT                   /product="Hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2560"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP3"
FT                   /protein_id="CAE32558.1"
FT                   /translation="MKPATIVGAVLIVLGAAALVYKGFSYTSEETVLQVGSVKATAQTE
FT                   KDVAIPSWAGIAAIVVGVLIIGVGMRR"
FT   misc_feature    117268..117321
FT                   /note="Signal peptide predicted for BB2062 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.891) with cleavage site
FT                   probability 0.382 between residues 18 and 19"
FT   misc_feature    join(117280..117348,117409..117477)
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB2062 by TMHMM2.0 at aa 5-27 and 48-70"
FT   CDS             complement(117750..119057)
FT                   /transl_table=11
FT                   /locus_tag="BB2063"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2559"
FT                   /db_xref="GOA:Q7WKP2"
FT                   /db_xref="HSSP:1Q7E"
FT                   /db_xref="InterPro:IPR003673"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP2"
FT                   /protein_id="CAE32559.1"
FT                   /translation="MHKQCIKCTDARQTKRLCWSEAGCNIVASQPSWRPVAHLSMLAQS
FT                   APAKPLAGLKVLDITHMLAGPYCTWLLGLLGAEVIKVERPGEGDFARAIAPFHGGESLY
FT                   FMSVNRNKRSIAVNLKTEEGKQILRDLIARSDILVENNRAGVMDRLGLGYDDAKALNPG
FT                   LVYASISGYGQTGPYRHKPAFDVIAQAISGMMSITGQEGGPPARVGVSIGDIASGLFAT
FT                   VAILAAIEGRHGSGEGAFIDVSMMDCQMALMENAISRYLNAGDVPERLGSRHPLIAPFQ
FT                   SFETKDFPIAVCVDTEPQWQRFCAALDLEPLLHDPRFQDGPMRALNHSQLEPLLNAVFA
FT                   SGRRDDFIARLEAADVPCSPINSIPEVARDPQVAHRRILVDNEGVKYVGAPFHYNRAPV
FT                   GGETSPPALGADSVSILRELGRSEAQIADLQRTGVL"
FT   misc_feature    complement(118146..118715)
FT                   /note="HMMPfam hit to PF02515, DE CAIB/BAIF family, score
FT                   8e-75"
FT   CDS             complement(119075..119962)
FT                   /transl_table=11
FT                   /locus_tag="BB2064"
FT                   /product="LysR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2558"
FT                   /db_xref="GOA:Q7WKP1"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP1"
FT                   /protein_id="CAE32560.1"
FT                   /translation="MIYRRLPPLIAVRAFDAFSRSGSIRAAADLLAISHTVVSRHIQNL
FT                   EDAVGTRLVKKDGRGLALTREGQRFAAKTRRALDLIADACGELVHGRGDAIHVCCMAGL
FT                   ASRRLLMRLPELESRLDGKELILQPTTARPDFNKDEADAEIIYLTQPFIGDGLRAEMFS
FT                   RPRILAVCSPAFRERFPDIGEPEHLVHLPLLHEQSTDQWEQWLGSVGVAQLPILRGPRL
FT                   WHGHLTMEAAQLGQGIALVSELLANDRIARGDLVEVLPNVSVQMGGYYFVAPEHKWNDP
FT                   AIATVRQWLTEALS"
FT   misc_feature    complement(119081..119698)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 3.9e-15"
FT   misc_feature    complement(119759..119938)
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 2.3e-16"
FT   misc_feature    complement(119804..119896)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    complement(119834..119899)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1577.000, SD 4.56 at aa 22-43, sequence
FT                   GSIRAAADLLAISHTVVSRHIQ"
FT   CDS             120178..121341
FT                   /transl_table=11
FT                   /locus_tag="BB2065"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2557"
FT                   /db_xref="GOA:Q7WKP0"
FT                   /db_xref="InterPro:IPR016038"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKP0"
FT                   /protein_id="CAE32561.1"
FT                   /translation="MSISNRAAIVGLCESPRRHAPEVHPYQIQMECVQGALVDAGLSLA
FT                   DVDGLCVAAGDWAEGGGVNSVTEFAEYAGLRPTWFNSTDVGGCSYIVHAGHAAAAIAAG
FT                   LAEVVVISYAATPRWWPLSTPSFDPFVFPAGPGQYELPYGPTLISAYGLYAQRHMARYG
FT                   TTAEQLASVAVTFRTHAAANPHARLRTPITVDDVLASPMIASPLHKLDCCVVTDGGGAV
FT                   VMTSAERARDLRHKPVLLSGFGAATARTQLSQIAPDLSTPATLSGPRAFAMAGLSPADI
FT                   DVAQLYDAFTITPLLALEDLGFCKRGESGAFAADGQLTLGGALPCNTDGGGLSSNHPGK
FT                   RGIFALIEGARQLRGQGPGVQVPDAGRALVHGLGGTFCAAATAILTV"
FT   misc_feature    120868..121326
FT                   /note="HMMPfam hit to PF02803, DE Thiolase, C-terminal
FT                   domain, score 0.027"
FT   CDS             121349..121741
FT                   /transl_table=11
FT                   /locus_tag="BB2066"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2556"
FT                   /db_xref="InterPro:IPR002878"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN9"
FT                   /protein_id="CAE32562.1"
FT                   /translation="MFDVTMPPVQDACSQPFWEAARQQRLLVQQCPTTGLHQWYPRAHS
FT                   LADPGAAPRWVQASGRARLFSYTVIHKGGVQKAPYTCVLVELEEGPLMLTRCPSERPLQ
FT                   VDMPMRVAFEKIGDTLTLPVFVPMES"
FT   CDS             121742..122185
FT                   /transl_table=11
FT                   /locus_tag="BB2067"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2555"
FT                   /db_xref="GOA:Q7WKN8"
FT                   /db_xref="InterPro:IPR002539"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN8"
FT                   /protein_id="CAE32563.1"
FT                   /translation="MPVEFERIKLGERHVSSRITITESHIVTFAGLTGDFNPLHMDEVA
FT                   ARENGYGQRIAHGMLGHAVSTGLRSGIDDWDIVAFLETRRRFVAPILAGDSVRYEAQVL
FT                   ELRPSRSKPFGVVKVSMQLRNQDGVTVQDGEDVFAVAMRGGVA"
FT   misc_feature    121751..122116
FT                   /note="HMMPfam hit to PF01575, DE MaoC like domain, score
FT                   2.5e-16"
FT   CDS             122186..122932
FT                   /transl_table=11
FT                   /gene="fabG"
FT                   /locus_tag="BB2068"
FT                   /product="probable 3-oxoacyl-[acyl-carrier protein]
FT                   reductase"
FT                   /EC_number="1.1.1.100"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2554"
FT                   /db_xref="GOA:Q7WKN7"
FT                   /db_xref="HSSP:1FJH"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN7"
FT                   /protein_id="CAE32564.1"
FT                   /translation="MKNERSQGRVALVTGGAGGIGLAVCRRLQAEGARIVVGDIGEERV
FT                   LAAAASLGEGALGVFLDVADRQSWAAAKRAVDAQGWQVDIVVNVAGIVRDRSLAKMSDA
FT                   EWSAVIDVNLRGTWLGCQSAFAWIGERGWGRIINVASTAIFGAYGQANYSAAKAGIVGL
FT                   TRTAALEGAKRGILVNAVAPGIVETAILADVPDQVREGWLARMPLKRTARPEEIAAVIA
FT                   FLASDDASYMTGQTLVVDGGATTGDY"
FT   misc_feature    122204..122914
FT                   /note="HMMPfam hit to PF00106, DE short chain
FT                   dehydrogenase, score 6.2e-75"
FT   misc_feature    122603..122689
FT                   /note="PS00061 Short-chain dehydrogenases/reductases family
FT                   signature."
FT   CDS             122970..124007
FT                   /transl_table=11
FT                   /locus_tag="BB2069"
FT                   /product="putative extracellular solute-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2553"
FT                   /db_xref="GOA:Q7WKN6"
FT                   /db_xref="InterPro:IPR006059"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN6"
FT                   /protein_id="CAE32565.1"
FT                   /translation="MNQYSRRDMLRLGVSASAALAGSVFLPVRAQDNPLYEAARKEGAL
FT                   NLYWGSYEQKSIEDIRDAFVKKYPGIQVNLLRQGSQTVYTRLRLELQNNAANCDSLGTT
FT                   NLLHYTELKKINALMAYRPTGAEHLPEAFRGLDPDNTFHVGAISITSINFQSQKVPNPP
FT                   ESWQALLDPAWAGKITVGSPASSGDVAHWALAMRLKYGDGFFKKFAAQKPKVGQSNVDT
FT                   VTDILAGERVVGAAAPFSYSLTQKAAGQPVDVKVPTDDAILNLGLTAIPAKAPHPNAAK
FT                   LFTDFLYSTEVSQILARNYWPTLRTDVPWAEGRSLESLKWFRNPTDDLTKQINDTIALW
FT                   RSTVG"
FT   misc_feature    122970..123059
FT                   /note="Signal peptide predicted for BB2069 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.997 between residues 30 and 31"
FT   misc_feature    123114..124001
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF01547, DE Bacterial extracellular
FT                   solute-binding protein, score 0.0091"
FT   CDS             124048..125787
FT                   /transl_table=11
FT                   /locus_tag="BB2070"
FT                   /product="ABC transport protein, solute-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2552"
FT                   /db_xref="GOA:Q7WKN5"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN5"
FT                   /protein_id="CAE32566.1"
FT                   /translation="MTEKPAVAREPRAGRHALPAIAVTVLVAAALALLVLQPVGIIALN
FT                   SWRDDLTGQWSLVNYLRIFTTPNLIEPMLNSLVLAGSTAVIATALGVPMAWLVSRTDMP
FT                   GRGLVRVLVLAAFITPSFIGALGWILLAAPNSGWLNVWLRQWLGGDSPLNIYSMWGAVF
FT                   VCAVYTVPFTFTIVATALDEMAVELEDASAMLGGGILRTMRSVTLPLVMPAIVAGFILS
FT                   FIQGMTLFGVPAFLLTPARVPVVTTKLAEFYQMFPPELNLAAAYCMPLLLMTGGLFFLR
FT                   RRILGRRQYVMIGGKARGSRLVGLGRWRWPALLGALLVPAVTVFLPYASLTLVSLSKAW
FT                   GQGPSWDNLTLHWYRWAVLDNPQTQSAIVNSLLYATMAATVCLLLGVVVAYMVERKLFR
FT                   GAWALGATASVPIIIPGIVLSVGFFSAFTQPFYGLYGTGALLVLAFVATFLPIAYSHGG
FT                   AIIKTISPDLERASRILGAGQVGTFGRITLPLMKPGLVSGWMLVFIPVMRELSVAVFLI
FT                   TPQTNVMTTLIYNYKDGGNYEAVCATSNVLLLGTILIVMLGRLLTGLARRRGAAPVTAG
FT                   VTS"
FT   misc_feature    join(124108..124176,124276..124344,124378..124446,
FT                   124510..124578,124669..124737,124831..124887,
FT                   124975..125043,125158..125226,125245..125313,
FT                   125341..125409,125530..125598,125662..125730)
FT                   /note="12 probable transmembrane helices predicted for
FT                   BB2070 by TMHMM2.0 at aa 21-43, 77-99, 111-133, 155-177,
FT                   208-230, 262-280, 310-332, 371-393, 400-422, 432-454,
FT                   495-517 and 539-561"
FT   misc_feature    124585..124815
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 2.8e-07"
FT   misc_feature    125425..125646
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 6.1e-12"
FT   misc_feature    125428..125514
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   CDS             125784..126848
FT                   /transl_table=11
FT                   /locus_tag="BB2071"
FT                   /product="ABC transport protein, ATP-binding component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2551"
FT                   /db_xref="GOA:Q7WKN4"
FT                   /db_xref="HSSP:1G29"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN4"
FT                   /protein_id="CAE32567.1"
FT                   /translation="MKAIRIQGLTKHYGAHQVLRGIDLELAQGELLALLGPSGCGKSTT
FT                   LQMLAGFDQPTDGQIWIGDRQVSGAGVMVPPERRNISLVFQNYAVWPHMTVFENVAYGL
FT                   QVRKVARTELAQRVKRALDTVRLTALAQRYPSELSGGQQQRVALARALVVEPDILLLDE
FT                   PLSNLDAHLREEMRYEIRQVHDLLGLTTVYVTHDQGEALVTADKIAVMQSGQVQQFDSP
FT                   VNVFSRPANAFVASFIGTNNELHGQLAEPGALRVGDRVLHGDDRSQAGAGGAACLCIRP
FT                   SAVKLGAAPGANTLSGTVTRVAYLGEYRDVQVELAAGQFVRAYVDPSSTLEPGQRVEVH
FT                   LPIEHCQILSVTTS"
FT   misc_feature    125868..126425
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   3.7e-60"
FT   misc_feature    125889..125912
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    126195..126239
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    126648..126827
FT                   /note="HMMPfam hit to PF03459, DE TOBE domain, score
FT                   1.3e-08"
FT   CDS             126876..127652
FT                   /transl_table=11
FT                   /locus_tag="BB2072"
FT                   /product="putative enoyl-CoA hydratase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2550"
FT                   /db_xref="GOA:Q7WKN3"
FT                   /db_xref="InterPro:IPR018376"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN3"
FT                   /protein_id="CAE32568.1"
FT                   /translation="MVHSEIREGALWILFDRPAARNAMTAEMEHAILALCESVAHRPEI
FT                   KAVVFSGAPASKPAFMAGADFGALETATTAEEFVALERSSEALLEAIEGMRVPTIAAMA
FT                   GACVGGGALLALCCDIRIATPSLKFGFPIARTVGNCLSVKNYARLAENLGAQRVRDMVF
FT                   SASLLSADALLHAGAIREIVPEDALHGRAQAIAAQVMALAPLTLWATRTSLLRLRDKAV
FT                   DGIADDDILSACYMSADFQEGVRAFMEKRAPAWIGA"
FT   misc_feature    126906..127427
FT                   /note="HMMPfam hit to PF00378, DE Enoyl-CoA
FT                   hydratase/isomerase family, score 7e-18"
FT   misc_feature    127173..127235
FT                   /note="PS00166 Enoyl-CoA hydratase/isomerase signature."
FT   CDS             complement(127901..129577)
FT                   /transl_table=11
FT                   /locus_tag="BB2073"
FT                   /product="putative sugar transport protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2549"
FT                   /db_xref="GOA:Q7WKN2"
FT                   /db_xref="InterPro:IPR005829"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN2"
FT                   /protein_id="CAE32569.1"
FT                   /translation="MSTATLSGQSPSAQRRPMTREERRVIFASSLGTVFEWYDFYLYGS
FT                   LAAIIAQHFFSGVNPTAAFIFALLAFAAGFAVRPFGALVFGRLGDLVGRKYTFLITIVI
FT                   MGLSTFLVGVLPSYASIGIAAPAILIILRLLQGLALGGEYGGAATYVAEHAPHGRRGFY
FT                   TSWIQTTATLGLFLSLLVILGVRTFMGEEAFKDWGWRIPFLISVVLLGISVWIRLQLNE
FT                   SPTFKRMKEEGKGSKAPIAESFGQWRNLKVVILALLGLTAGQAVVWYTGQFYALFFLTQ
FT                   SLKIDSNTANIMIAIALLVGTPFFVLFGALSDRIGRKPIIMAGCLIAALTYFPIFKGLT
FT                   HYANPALEKAQATAPVTVIADPATCSFQFNPVGTASFTSSCDVVKSFMARNSVNYENQS
FT                   AAAGSVAKVMIGNDEFASFDGKGLAPAEFKAKATELDKALTAAIRSHGYPAKADPAQTN
FT                   YFMVVVLLTLLVIYVTMVYGPIAAMLVEMFPTRIRYTSMSLPYHIGNGWFGGFLPPVAF
FT                   AVVAATGNIYDGLWYPIIIAVMTLVIGTLFVRETKDNDINA"
FT   misc_feature    complement(join(127934..127993,128006..128074,
FT                   128135..128203,128570..128623,128642..128710,
FT                   128753..128821,128915..128983,129026..129094,
FT                   129155..129223,129233..129292,129326..129394,
FT                   129437..129505))
FT                   /note="12 probable transmembrane helices predicted for
FT                   BB2073 by TMHMM2.0 at aa 25-47, 62-84, 96-115, 119-141,
FT                   162-184, 199-221, 253-275, 290-312, 319-336, 459-481,
FT                   502-524 and 529-548"
FT   misc_feature    complement(128258..129508)
FT                   /note="HMMPfam hit to PF00083, DE Sugar (and other)
FT                   transporter, score 3.7e-30"
FT   misc_feature    complement(129098..129175)
FT                   /note="PS00217 Sugar transport proteins signature 2."
FT   CDS             complement(129772..131130)
FT                   /transl_table=11
FT                   /locus_tag="BB2074"
FT                   /product="two-component system histidine kinase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2548"
FT                   /db_xref="GOA:Q7WKN1"
FT                   /db_xref="HSSP:1ID0"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN1"
FT                   /protein_id="CAE32570.1"
FT                   /translation="MLAPLFLLWPMSVAITYVVAQNIANVPYDRALANNLNVLSHQVHA
FT                   VDGRAALRMTDAARDVLRVDETESVFWLALGSRGEYLGGDRALPLPPNVGQPRPGEILY
FT                   ADDTLRGFGVRLAYTWIDLGLPDTQPALVMVAETVEKRAQLANDIIKGVIIPQFVVLPI
FT                   AVLLVWFGLSRGVAPLNALQQRLRARRPDDLSPIDEQAAPSEIAPLVGAMNDLLDRLSA
FT                   NIETQRRFVADAAHQLKTPLAGLRTQAELALRDASPEEMQSSLRQLVTGSERATRLVNQ
FT                   LLLLARAENPDSPGQALTDLNAIAYEQTMQWVPQALALSTDLGFEGADRPVGISGNAIL
FT                   LAELLNNLIDNALRYTPRGGHITVRVSAQGDHAVLDVEDSGPGIAPEERERVFDRFYRV
FT                   LGTASDGSGLGLAIVREIAQKHQAEVVIDEHPTPYSDLPGTRIQVRFPLPGTL"
FT   misc_feature    complement(129784..130125)
FT                   /note="HMMPfam hit to PF02518, DE Histidine kinase-, DNA
FT                   gyrase B-, and HSP90-like ATPase, score 1.4e-37"
FT   misc_feature    complement(130258..130455)
FT                   /note="HMMPfam hit to PF00512, DE His Kinase A
FT                   (phosphoacceptor) domain, score 2.6e-18"
FT   misc_feature    complement(130465..130671)
FT                   /note="HMMPfam hit to PF00672, DE HAMP domain, score
FT                   6.6e-09"
FT   misc_feature    complement(join(130618..130686,131050..131118))
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB2074 by TMHMM2.0 at aa 5-27 and 149-171"
FT   misc_feature    complement(131071..131130)
FT                   /note="Signal peptide predicted for BB2074 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.935) with cleavage site
FT                   probability 0.932 between residues 20 and 21"
FT   CDS             complement(131246..131935)
FT                   /transl_table=11
FT                   /locus_tag="BB2075"
FT                   /product="two-component response regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2547"
FT                   /db_xref="GOA:Q7WKN0"
FT                   /db_xref="HSSP:1KGS"
FT                   /db_xref="InterPro:IPR001867"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKN0"
FT                   /protein_id="CAE32571.1"
FT                   /translation="MRILIAEDDSILADGLSRSLRHNGYAVDAVRDGLAADSALAVQPF
FT                   DLLILDLGLPHLPGLEVLRRLRARNSVLPVLILTAADSIEQRVKGLDLGADDYMAKPFA
FT                   LSELEARVRALTRRGAGGGATIVRHGRLVFDQTGRIATVDDQTLDLSAREVSLLEILLA
FT                   RSGRMVSKTQLVDHLCEWGEEVSTNAIEVYVHRLRKKLEPSGVKIITVRGLGYCLERDQ
FT                   GASYLAS"
FT   misc_feature    complement(131291..131500)
FT                   /note="HMMPfam hit to PF00486, DE Transcriptional
FT                   regulatory protein, C terminal, score 9.9e-21"
FT   misc_feature    complement(131576..131935)
FT                   /note="HMMPfam hit to PF00072, DE Response regulator
FT                   receiver domain, score 1.1e-36"
FT   CDS             132175..133236
FT                   /transl_table=11
FT                   /gene="recA"
FT                   /locus_tag="BB2076"
FT                   /product="RecA protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2546"
FT                   /db_xref="GOA:P0A449"
FT                   /db_xref="HSSP:2REB"
FT                   /db_xref="InterPro:IPR001553"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A449"
FT                   /protein_id="CAE32572.1"
FT                   /translation="MDDKTSKAAAAEKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDI
FT                   QVVSTGSLGLDIALGVGGLPRGRVIEVYGPESSGKTTLTLQVIAEMQKLGGTCAFVDAE
FT                   HALDVQYASKLGVNLTDLLISQPDTGEQALEITDALVRSGSVDLIVIDSVAALVPKAEI
FT                   EGEMGDSLPGLQARLMSQALRKLTATIKRTNCMVIFINQIRMKIGVMFGNPETTTGGNA
FT                   LKFYSSVRLDIRRIGAIKKGDEVVGNETRVKVVKNKVAPPFKQAEFDIMYGSGISREGE
FT                   IIDLGVQANVVDKSGAWYSYSGNRIGQGKDNVREYLKEHKEMAIEIENKVRENQGIVSR
FT                   AATFPASEAEDGE"
FT   misc_feature    132217..133185
FT                   /note="HMMPfam hit to PF00154, DE recA bacterial DNA
FT                   recombination protein, score 3.3e-245"
FT   misc_feature    132394..132417
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    132838..132864
FT                   /note="PS00321 recA signature."
FT   CDS             133269..133835
FT                   /transl_table=11
FT                   /locus_tag="BB2077"
FT                   /product="RecX-family regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2545"
FT                   /db_xref="GOA:Q7WKM9"
FT                   /db_xref="InterPro:IPR003783"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKM9"
FT                   /protein_id="CAE32573.1"
FT                   /translation="MATFNRRPPSAARAGRRTANPDDEFETLAQPRDDAAAPSRPGRTL
FT                   KARAVGYLSRREYSRLELARKLQPYAEEGDDIEAVLDDLQREGWLSNARFAQSLAHRRA
FT                   PRQGASRIVQELKQQGVADDQVAELREQLRATEYARALAVWQKRFGEKPADRAAYARQA
FT                   RFLAGRGFAHDVIRRILGGGDDELD"
FT   misc_feature    133467..133826
FT                   /note="HMMPfam hit to PF02631, DE RecX family, score
FT                   0.00023"
FT   CDS             complement(133910..134839)
FT                   /transl_table=11
FT                   /gene="metR"
FT                   /locus_tag="BB2078"
FT                   /product="transcriptional regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2544"
FT                   /db_xref="GOA:Q7WKM8"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKM8"
FT                   /protein_id="CAE32574.1"
FT                   /translation="MLEIRHLETLAAIRDGGSLQEAAERLHLTQSALSHQLRDLETRLG
FT                   TPLLNRRTRPARLTTAGLRVLALADDVLPRLRATERELQRLAAGRTGRLHLAIECHSCF
FT                   QWLMPALDAFRGQWPDVALDLSAAFSFAPLPALVRGDLDLVITSDPQALEAVTYLPLFK
FT                   YELVLAVAESNPLAANRHVMPEQLADQTLITYPVDRQRLDIFTGFLDPADIEPAAIRRA
FT                   ELTPIIAQLVASNRGVAALPNWALTEYLGQGWLRVCHLGPQGVWPTLYAAVRTEDSDSS
FT                   YIDEFLTIARDVCFKTLSGIKAAKGLPA"
FT   misc_feature    complement(133955..134581)
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 2.4e-37"
FT   misc_feature    complement(134651..134830)
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 1.4e-20"
FT   misc_feature    complement(134696..134788)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    complement(134726..134791)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   2186.000, SD 6.63 at aa 17-38, sequence
FT                   GSLQEAAERLHLTQSALSHQLR"
FT   CDS             135001..137295
FT                   /transl_table=11
FT                   /gene="metE"
FT                   /locus_tag="BB2079"
FT                   /product="5-methyltetrahydropteroyltriglutamate--homocyst
FT                   eine methyltransferase"
FT                   /EC_number="2.1.1.14"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2543"
FT                   /db_xref="GOA:Q7WKM7"
FT                   /db_xref="InterPro:IPR006276"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKM7"
FT                   /protein_id="CAE32575.1"
FT                   /translation="MTIIHNLGFPRIGAQRELKRAVEAYWAGRQTAEALHETGRALRAA
FT                   HWQRQADAGVAFVPVGDFAWYDHILEWTTLLGAVPARFGHPEGKPVDLDTLFRMGRGRA
FT                   PSGKPAAACEMTKWFDTNYHYIVPELTPGQTFRVAREDLFEQVKEAQALGHRVKPVIPG
FT                   PLTWLWLGKGDAFAQGAGDIGKLQLLDALLPVYGEVLERLAGLGVEWVQIDEPALVLDL
FT                   PQAWRDAYQAVYAKLAASPVKLLLATYFDGLKDNLATALALPVAGLHVDLVRAPDQLSD
FT                   VASGLRPGQVLSAGVINGRNIWRTDLDAALAMLAPVREQLQERLWLAPSCSLLHVPVDL
FT                   AGETELDAELLGWLSFAVQKLDELCLLGKALGGDADPAVQQGLAAQRAALQARRQSPRI
FT                   HNPAVAQRMAGQAGVSRERAPFGQRIARQQSELRLPAFPTTTIGSFPQTAEIRALRRDW
FT                   KSGALTDSAYENAIRKEIEEVIRFQEKVGLDVLVHGEPERNDMVEYFGELLAGFAFTKN
FT                   GWVQSYGSRCVKPPIIFGDVARPAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVR
FT                   DDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDC
FT                   FRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAFEDFHYP
FT                   NDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIG
FT                   MVQAARTLRAA"
FT   misc_feature    136309..137280
FT                   /note="HMMPfam hit to PF01717, DE Methionine synthase,
FT                   vitamin-B12 independent, score 9.4e-218"
FT   CDS             137500..138102
FT                   /transl_table=11
FT                   /locus_tag="BB2080"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2542"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKM6"
FT                   /protein_id="CAE32576.1"
FT                   /translation="MPLPPPDTPRQPLHTRSIRVQSYGREDGLWDLEAELIDYKGYDFP
FT                   KRDGQLFKAGEFIHHMHLRITIDEAYTIIAAQAVYDAAPYDGVCTNIEQAYRDLVGMNL
FT                   LKGFRRQVKERFGHVAGCTHMTELSQVLPTAAVQSMAGRRRQNSNPDKRPFQLGGCHAL
FT                   RTDGPVVQEHYPKWYTGANAGSSADTSSDSPSLSHTS"
FT   CDS             138113..139273
FT                   /transl_table=11
FT                   /gene="sucC"
FT                   /locus_tag="BB2081"
FT                   /product="Succinyl-CoA synthetase, beta chain"
FT                   /EC_number="6.2.1.5"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2541"
FT                   /db_xref="GOA:Q7WKM5"
FT                   /db_xref="HSSP:1JKJ"
FT                   /db_xref="InterPro:IPR016102"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKM5"
FT                   /protein_id="CAE32577.1"
FT                   /translation="MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKLGGPVWVV
FT                   KAQIHAGGRGKGGGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADI
FT                   KKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAEL
FT                   ARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDAKFNFDSNA
FT                   LFRHPEIVAYRDLDEEDPAEIEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGG
FT                   EPANFLDVGGGATAEKVTEAFKIMLKNKSVKAILVNIFGGIMRCDVIAEGVITACKAVN
FT                   LNVPLVVRMKGTNEELGKKMLAESGLPIISADTMAEAATKVVAAVK"
FT   misc_feature    138197..138706
FT                   /note="HMMPfam hit to PF02222, DE ATP-grasp domain, score
FT                   2.7e-42"
FT   misc_feature    138848..139267
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00549, DE CoA-ligase, score
FT                   5.2e-71"
FT   misc_feature    138881..138955
FT                   /note="PS01217 ATP-citrate lyase / succinyl-CoA ligases
FT                   family signature 3."
FT   CDS             139293..140174
FT                   /transl_table=11
FT                   /gene="sucD"
FT                   /locus_tag="BB2082"
FT                   /product="succinyl-CoA synthetase, alpha chain"
FT                   /EC_number="6.2.1.5"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2540"
FT                   /db_xref="GOA:Q7WKM4"
FT                   /db_xref="HSSP:1JKJ"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKM4"
FT                   /protein_id="CAE32578.1"
FT                   /translation="MSILINKDTKVITQGITGKTGQFHTRMCREYANGKAAFVAGVNPK
FT                   KAGEDFEGVPIYANVKDAKADTGATVSVIYVPPAGAAAAIWEAVEAELDLVICITEGIP
FT                   VRDMLEVKNRMQAMNSKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGIVSRSGTLT
FT                   YEAVAQVTELGLGQSSAVGIGGDPINGLKHVDVLKLFNDDPDTDAVIMIGEIGGPDEVN
FT                   AAQWAKDNMKKPVVGFIAGVTAPAGKRMGHAGALISGGADTADAKLEVMEACGIRTTRN
FT                   PSEMGKLLKSVL"
FT   misc_feature    139302..139646
FT                   /note="HMMPfam hit to PF02629, DE CoA binding domain, score
FT                   2e-52"
FT   misc_feature    139704..140147
FT                   /note="HMMPfam hit to PF00549, DE CoA-ligase, score
FT                   1.8e-40"
FT   misc_feature    139761..139850
FT                   /note="PS01216 ATP-citrate lyase / succinyl-CoA ligases
FT                   family signature 1."
FT   misc_feature    140013..140054
FT                   /note="PS00399 ATP-citrate lyase / succinyl-CoA ligases
FT                   family active site."
FT   CDS             140450..141145
FT                   /transl_table=11
FT                   /locus_tag="BB2083"
FT                   /product="integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2539"
FT                   /db_xref="GOA:Q7WKM3"
FT                   /db_xref="InterPro:IPR005496"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKM3"
FT                   /protein_id="CAE32579.1"
FT                   /translation="MELSSAAFWIALLQIIWVNILLSGDNAVVIALAARSLPPDQQKKA
FT                   IVVGSAAAIVMRIVLTLVAAKLLLLPWLKLIGAALLVYIGVSLLLPEGEDDGAEKGHGS
FT                   LFVAIRTIMIADLVMSLDNVVAVAAAAMGDTTLLVLGLAISIPLVIFGSALLLKVIERF
FT                   PIIVWVGAALLGFIAGELLVGDPALEESVARIDTMLGVTQHDFALMVGAIGAILVLALG
FT                   KIFQARQRA"
FT   misc_feature    140462..141094
FT                   /note="HMMPfam hit to PF03741, DE Integral membrane protein
FT                   TerC family, score 3.3e-46"
FT   misc_feature    join(140477..140545,140582..140641,140651..140719,
FT                   140756..140824,140852..140920,140939..140998,
FT                   141065..141124)
FT                   /note="7 probable transmembrane helices predicted for
FT                   BB2083 by TMHMM2.0 at aa 10-32, 45-64, 68-90, 103-125,
FT                   135-157, 164-183 and 206-225"
FT   CDS             141217..142023
FT                   /transl_table=11
FT                   /locus_tag="BB2084"
FT                   /product="integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2538"
FT                   /db_xref="GOA:Q7WKM2"
FT                   /db_xref="InterPro:IPR005496"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKM2"
FT                   /protein_id="CAE32580.1"
FT                   /translation="MAAFCHGEADGGLPGISPVFTNNACWGFQVLEFFQTLSWAAVFQI
FT                   ILIDILLGGDNAVVIALACRNLAPKQRMQGILWGTAGAIILRVVLIAFALTLLNIPFLK
FT                   VVGGLLLVWIGVKLLVPEDEGHDSIKGGTSIVAAVKTIIIADFVMSLDNVIAIAGAAQN
FT                   AHADHQIGLVVFGLVVSVPIIIWGSTLVLKLIDRFPMVVTFGAALLGWIAGGMLITDVF
FT                   VVRQFGEQPSAVKIGVEIAGALLVVLLGRWLASRKTASKESVNESA"
FT   misc_feature    141316..141957
FT                   /note="HMMPfam hit to PF03741, DE Integral membrane protein
FT                   TerC family, score 9.7e-47"
FT   misc_feature    join(141334..141402,141439..141507,141619..141687,
FT                   141724..141792,141820..141888,141922..141981)
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB2084 by TMHMM2.0 at aa 40-62, 75-97, 135-157, 170-192,
FT                   202-224 and 236-255"
FT   CDS             142142..143086
FT                   /transl_table=11
FT                   /gene="HemC"
FT                   /locus_tag="BB2085"
FT                   /product="porphobilinogen deaminase"
FT                   /EC_number="4.3.1.8"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2537"
FT                   /db_xref="GOA:Q7WKM1"
FT                   /db_xref="InterPro:IPR000860"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKM1"
FT                   /protein_id="CAE32581.1"
FT                   /translation="MAAVERLTIATRASRLALWQAEHVRDLLRARYPACSVELLTLTTR
FT                   GDQILDRTLSKVGGKGLFVKELETALLDGRADLAVHSLKDVPVDLHAPFELSCVLERAD
FT                   PRDAFVSNDYGSLADLPPGAAVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNG
FT                   DYAAIVLAAAGLERLGLAARIRALLEPADSLPAAGQGALGIEILQGRADVRAMLAPLGD
FT                   AATLACVTAERAVSRMLGGSCQVPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPR
FT                   DQAQAIGESAARDLLADGADAILAELLPTSPAP"
FT   misc_feature    142157..142795
FT                   /note="HMMPfam hit to PF01379, DE Porphobilinogen
FT                   deaminase, dipyromethane cofactor binding domain, score
FT                   3.6e-117"
FT   misc_feature    142817..143038
FT                   /note="HMMPfam hit to PF03900, DE Porphobilinogen
FT                   deaminase, C-terminal domain, score 4.2e-23"
FT   misc_feature    142835..142885
FT                   /note="PS00533 Porphobilinogen deaminase cofactor-binding
FT                   site."
FT   CDS             143083..143907
FT                   /transl_table=11
FT                   /locus_tag="BB2086"
FT                   /product="putative uroporphyrinogen-III synthase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2536"
FT                   /db_xref="GOA:Q7WKM0"
FT                   /db_xref="InterPro:IPR003754"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKM0"
FT                   /protein_id="CAE32582.1"
FT                   /translation="MTGRSGPRGGLPMSQIAILTRPQGRNGALAQRLHEAGWQTLCLPA
FT                   LRIEPLPPENGAVPLPRDYDLVVFVSGNAARLYLEQLGERGQLPWPAGAVAATVGPASA
FT                   RALLDSGQFGADTTVLHPAETAPTHDSEALWSLLRARPALPRRALLVRGTQGRDWLADR
FT                   LAAAGVEVSRHAVYRRRPAPWAQEGRQRLRDWARAGERPTWLLTSGEGIDALVQGLREE
FT                   QLLDWWLQGRFVVTHPVLAERLRALAGGGADAPMVKNCMPADEAIFATFVAA"
FT   misc_feature    143152..143844
FT                   /note="HMMPfam hit to PF02602, DE Uroporphyrinogen-III
FT                   synthase HemD, score 1.1e-05"
FT   CDS             143945..145129
FT                   /transl_table=11
FT                   /locus_tag="BB2087"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2535"
FT                   /db_xref="InterPro:IPR007470"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL9"
FT                   /protein_id="CAE32583.1"
FT                   /translation="MTDNTSATPPGTVPGTPGTAAADEAVASQSRKGKGVNSTLVTALI
FT                   IVILLAVGLGWAAWLQRKQFVSAGQEVAARLNTLGAELTQSRNDMREALALAQAQSGKV
FT                   AELEGKVREAQSQYSALQQALQNLNDGASDEMLANDIERLITIASQQLRLAGNVSNAIV
FT                   ALETAQARLARADRPRFASLQQSINGDLDRLRAVGVVDIAAQSARIDRLVALVGRAPLL
FT                   VPDAAAPGVTAVPQANEAVPASVDPGADLPADAAWWQRWQAEIASWPGRAGSALAHELG
FT                   DLIRVQRVDQPTALLLSPEQAGQLRSTLRQRLLTAQLSMLMRQPAVWKSELDAVAATLA
FT                   QYFDGKAPDTVAALALARELGQVEIAVRVPDVADSLNGIAALRAAGFNADGQQD"
FT   misc_feature    143945..144010
FT                   /note="Signal peptide predicted for BB2087 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.680) with cleavage site
FT                   probability 0.620 between residues 22 and 23"
FT   misc_feature    144056..144124
FT                   /note="1 probable transmembrane helix predicted for BB2087
FT                   by TMHMM2.0 at aa 38-60"
FT   CDS             145133..146728
FT                   /transl_table=11
FT                   /locus_tag="BB2088"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2534"
FT                   /db_xref="InterPro:IPR010817"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL8"
FT                   /protein_id="CAE32584.1"
FT                   /translation="MRTWFWTLLLAVVAVALAVVLRAHAGNVLLLVWPWRIELSLTLTV
FT                   LLLVAAFVTLYIGLRLLAWLVAIPDRLRAWRGRRAQERDHELLERGWIGLLEGRFAQAE
FT                   KDLSKLFDQTKVRSRRVLAALSGARAAHNLGEYERRDRMLESAREQAGEDAGLQEATAT
FT                   VSADMLLDQGRAQQALDLLEPLQDGGARHLHTMRLLLRAETALQHHERVFMLARGLLRR
FT                   NAIGKAEAEQLIDSAGAARLRAGMAVDQWRPIWKDLKSDERLLPNIALAGAAAFEDAGE
FT                   ASEAARILEAAVAVKFNPALVAAYARCDAAQVPHRLAKAETWLQQRPADTDLLTALGLL
FT                   CLNGQLWGQAERYLQRSVSRRNDPQAHALLGSLYDRLDRPADAARHWRQATAARVALPV
FT                   LAADIALPAADTKADPAWLDAEREYVPNMSEYTAPVIADAPPEVEPGAVDYVLDPDARA
FT                   AGEHEPASAVAPEPVSVPPRTAIDIEDYFDSAPIPAAAIEAPVSSYRAGGDDEQPAKPG
FT                   GAVSSAGPASGDKA"
FT   misc_feature    145133..145207
FT                   /note="Signal peptide predicted for BB2088 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.991 between residues 25 and 26"
FT   misc_feature    join(145142..145210,145268..145336)
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB2088 by TMHMM2.0 at aa 4-26 and 46-68"
FT   CDS             146757..147293
FT                   /transl_table=11
FT                   /gene="ppa"
FT                   /locus_tag="BB2089"
FT                   /product="inorganic pyrophosphatase"
FT                   /EC_number="3.6.1.1"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2533"
FT                   /db_xref="GOA:Q7WKL7"
FT                   /db_xref="HSSP:1FAJ"
FT                   /db_xref="InterPro:IPR008162"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL7"
FT                   /protein_id="CAE32585.1"
FT                   /translation="MSLDRVAPGKKLPDDFNVIIEIPMNADPVKYEVDKESGAIFVDRF
FT                   MLTAMHYPCNYGYIPQTLSEDGDPADVLVLTPFPIQIGAVVRCRAIGVLEMDDESGGDA
FT                   KLLAVPIEKLYPPYRNIKSYEDLPAEDVSRIQHFFEHYKDLEKGKWVKVKGWKGVDAAH
FT                   EEIVRSAERYAKGQA"
FT   misc_feature    146805..147281
FT                   /note="HMMPfam hit to PF00719, DE Inorganic
FT                   pyrophosphatase, score 4.2e-60"
FT   CDS             147477..148172
FT                   /transl_table=11
FT                   /locus_tag="BB2090"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2532"
FT                   /db_xref="GOA:Q7WKL6"
FT                   /db_xref="HSSP:1GTT"
FT                   /db_xref="InterPro:IPR002529"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL6"
FT                   /protein_id="CAE32586.1"
FT                   /translation="MDYVFPPSPPAAVPVAGGNARFPVRRVYCVGRNYAEHAKEMGFTG
FT                   REDPFFFCKPADAILSVADGATGEMPYPPKTANLHYEMELVVVLGKGGRDLTVEQADEC
FT                   VWGYALGLDMTRRDLQGEAKKQGRPWEVGKAFDLSAPLGPIHPRSAVGTLDKGAIWLDV
FT                   NGERKQSSDISQMIWNIPESIAYLSGLFELQPGDIIFTGTPEGVGAVVKGDVIVGGVEG
FT                   LGELRVRIA"
FT   misc_feature    147597..148112
FT                   /note="HMMPfam hit to PF01557, DE Fumarylacetoacetate (FAA)
FT                   hydrolase family, score 3e-56"
FT   CDS             148199..148330
FT                   /transl_table=11
FT                   /gene="ecnB"
FT                   /locus_tag="BB2091"
FT                   /product="entericidin B-like bacteriolytic toxin"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2531"
FT                   /db_xref="GOA:Q7WKL5"
FT                   /db_xref="InterPro:IPR012556"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL5"
FT                   /protein_id="CAE32587.1"
FT                   /translation="MRSKIVLTAFVVFGFVLQGCNTVAGMGKDMSDAGSAITHAAEK"
FT   misc_feature    148199..148255
FT                   /note="Signal peptide predicted for BB2091 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.973) with cleavage site
FT                   probability 0.523 between residues 19 and 20"
FT   misc_feature    148211..148279
FT                   /note="1 probable transmembrane helix predicted for BB2091
FT                   by TMHMM2.0 at aa 5-27"
FT   misc_feature    148226..148258
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             148688..148951
FT                   /transl_table=11
FT                   /locus_tag="BB2092"
FT                   /product="integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2530"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL4"
FT                   /protein_id="CAE32588.1"
FT                   /translation="MSVKQRQLGQGMTEYIIVVALVAVAAIAVYQLFGQVVRSQTAAMA
FT                   RELAGEDGSAQARAAQSAAGRAASQTRARSLKSFTGNAQGAK"
FT   misc_feature    148730..148798
FT                   /note="1 probable transmembrane helix predicted for BB2092
FT                   by TMHMM2.0 at aa 15-37"
FT   CDS             148948..150264
FT                   /transl_table=11
FT                   /locus_tag="BB2093"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2529"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL3"
FT                   /protein_id="CAE32589.1"
FT                   /translation="MRPTRAAVTRQAGQALALGLALMALAGMAWLALYGLGQRAGARAQ
FT                   LLRATDAAAYSGAVVQARALNLLAYIHRAQVGHQVALAHLASLAAWARFAQTQAARRTA
FT                   QNPPVALIGLLFGPRAARGYGAAHDALAGDLMQAYAAHDELAHRVLQQAADTLARDARA
FT                   TRDATMRAVLRAHYPQGDDGLTLEVLRDDWPGYLRRVTGTSARGLRGWAQRAAGYFDFL
FT                   QPRDFTREGNWIVSPRCPTRRHELRRRGVTWLDRDGRWGASDTLSFHAVRSNRWIGCYF
FT                   REYAMGWGLAADSGATRAGPHVLRAPEDFSQQDFWRWVHRHTSWNLLGGRHNPLALSYA
FT                   ASRRLSPGGRGLPAVYEPASSSEAAVGFEIRTQRREEGIVLSARAAGQSHFSLPPGTSV
FT                   ARGRPDVLFLPYWQARRAAADAALPMAARRTVRGPESRP"
FT   misc_feature    148948..149040
FT                   /note="Signal peptide predicted for BB2093 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.992) with cleavage site
FT                   probability 0.323 between residues 31 and 32"
FT   CDS             150261..150884
FT                   /transl_table=11
FT                   /locus_tag="BB2094"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2528A"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL2"
FT                   /protein_id="CAE32590.1"
FT                   /translation="MRGAAFSRRQRGQALAEALPLLAMLLLAWAAVAWLGTLRHQALRL
FT                   GQHSRVAAFMAAAAAPSAPRTATLARQAGLAGRTAADGMPALLARDWLQVDTRLLHAQA
FT                   AEPAAMPGGLLREGAITAALRGVTVLAIGPGHASDARAGNDRLARSVAGWQLAHRAAAP
FT                   AVAATRRRVRPVEAAWGLRDAGQDWLRTWADMASADGAVLRRQP"
FT   misc_feature    150261..150350
FT                   /note="Signal peptide predicted for BB2094 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.973) with cleavage site
FT                   probability 0.720 between residues 30 and 31"
FT   CDS             150881..151543
FT                   /transl_table=11
FT                   /locus_tag="BB2095"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2528"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL1"
FT                   /protein_id="CAE32591.1"
FT                   /translation="MTPAHLAASASASAWLHLPPGVVAAALAGQIQVFGVPAEVRVFHA
FT                   PQGIDALLAHFATRHAELRDLTVLPGLAVLAGGAGDCTHTISLAPQSGGVEGVAARLCW
FT                   PRGLPSRQPLADVLLPPHARLRLDVATRDGPVSVAQQVWHWRAAGPTETARWAVRREAR
FT                   LRASGWRLQGAAGPACRCGAPQTWLRAGPQGRERLSLQPALHANGCGMRLLHIGGAP"
FT   misc_feature    150881..150952
FT                   /note="Signal peptide predicted for BB2095 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.987) with cleavage site
FT                   probability 0.646 between residues 24 and 25"
FT   CDS             151540..152373
FT                   /transl_table=11
FT                   /locus_tag="BB2096"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2527"
FT                   /db_xref="InterPro:IPR013974"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKL0"
FT                   /protein_id="CAE32592.1"
FT                   /translation="MRAARWRQGLRALGGYAFALVAGSLAAWAAREHIQRRVHDIEQQA
FT                   RVPMVASLVAARDLEAGTPLHDELVAVRDMPQAWLPAGALPPDEAARLDGAVLRAPVKA
FT                   GEALQAALLSYPEQTPALTEQLEAGQGAITLPLQELPGLSAAARPGDLVDLYVSFTHRQ
FT                   RQLTMPLLAGSKVLALDPADAQGGASTITLRASAREVARLVAARQEGTLTAVLRRAGAP
FT                   ARAFAAPSAREAGDLPALLGMPRDAAPRAAVPVLYGDRLDAPAGALPGDTEAVMP"
FT   misc_feature    151540..151626
FT                   /note="Signal peptide predicted for BB2096 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.903 between residues 29 and 30"
FT   CDS             152370..153782
FT                   /transl_table=11
FT                   /locus_tag="BB2097"
FT                   /product="putative secretory apparatus"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2526"
FT                   /db_xref="GOA:Q7WKK9"
FT                   /db_xref="InterPro:IPR001775"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK9"
FT                   /protein_id="CAE32593.1"
FT                   /translation="MSMRSRLPLHARGWLPWMAVLLAGGSMLWTPGGRAASPAQPAVLR
FT                   MEVGETQVLAAAGVTRVAVGNGQVLSATVVDGAEVALFARQPGTSSVHIWSGRGARQAY
FT                   AVEVLPAGRRRLREEVAALLARIPRARSSAVGAHIVIEGSQLSEDDHARIAALAQRYPE
FT                   VLDFTGRVGWDRMVLLDVQVVELPRQSLRELGLRWDEPAAGGVHAGAVWNGGSAALAPP
FT                   PGPLSGAAAVRHAGGLLGVNALLSARLSALAQRGEAVLLAQPQLLARSGATASFQAGGE
FT                   LPYRATDKEGNGTTLFKPYGVSLQITPRIDADGAVHARIEVEASSVDPTLALAAGPALR
FT                   KRRAVTEFNVHSGQTLVLGGFLSRERSHEEKGLPWLSELPLIGALFGARRAALRETELA
FT                   IFVTPTIVSPSDSFLQRRALLGQMQLDQAFPEAPRLGTGAAADQSADWSRPGGAGSQWR
FT                   QPPSADAQEGAP"
FT   misc_feature    152370..152477
FT                   /note="Signal peptide predicted for BB2097 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.972) with cleavage site
FT                   probability 0.543 between residues 36 and 37"
FT   misc_feature    152805..153593
FT                   /note="HMMPfam hit to PF00263, DE Bacterial type II and III
FT                   secretion system protein, score 1.2e-42"
FT   misc_feature    153426..153527
FT                   /note="PS00875 Bacterial type II secretion system protein D
FT                   signature."
FT   CDS             153779..155395
FT                   /transl_table=11
FT                   /locus_tag="BB2098"
FT                   /product="probable secretory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2525A"
FT                   /db_xref="GOA:Q7WKK8"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK8"
FT                   /protein_id="CAE32594.1"
FT                   /translation="MNVLELALHFEDGARRRMRLAAPVTIGRGAQCALRIANWRVGRVH
FT                   ARLSCLDGAVVLEDLGTLGGTSVNGLRVATHAPVLPDDEIVIGPCLIRVSACCAGSVPS
FT                   PAPAALPAGGASRGEDLDAALQQSLVLLPHRRRLHAALLEALDLRRRDVSAMSDRMLRA
FT                   QAEQRLVELVGQDGELPEGIDRAQLCRAVLDEAVGLGPLEPLLADGGISEIMVNRHDEI
FT                   YVERAGRLQRHAAAFSSEQAVRWVVERIVAPLGRRIDDSSPMVDARLPDGSRVNAVIAP
FT                   IAIRGVSLTIRKFPRQRPGMADLLAAGSLSEPMARFLLQCVHARKNLLVSGGTGSGKTT
FT                   LLNILSNAIPEGERIVTIEDAAELRLDHAHLVALEARPANAEGRGRVDIRDLVRNALRM
FT                   RPDRIVVGECRGAEAFDMLTAMNTGHEGSLTTLHANTPRDALARLEAMTLMAGLDLPLP
FT                   VVREHIAASIDIIVQQARMADGRRIVTAIVEIAGMESGRIQTQELFRYDARHGFIAGDA
FT                   PVLADGAWARGPFTGQPEPAP"
FT   misc_feature    153848..154042
FT                   /note="HMMPfam hit to PF00498, DE FHA domain, score 2e-08"
FT   misc_feature    154436..155224
FT                   /note="HMMPfam hit to PF00437, DE Type II/IV secretion
FT                   system protein, score 3.7e-07"
FT   misc_feature    154769..154789
FT                   /note="PS00227 Tubulin subunits alpha, beta, and gamma
FT                   signature."
FT   misc_feature    154772..154795
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             155392..156237
FT                   /transl_table=11
FT                   /locus_tag="BB2099"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2525"
FT                   /db_xref="InterPro:IPR018076"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK7"
FT                   /protein_id="CAE32595.1"
FT                   /translation="MIWLAMGMAMAAAAWLAWRVLAWSGPAARRYRAVYTQQAGAHLSE
FT                   VFLFVDPAQLWAAALAMAAAGAAAAWVFSGSAWLAAVAAVALLRLPHLLLGAARRRRLR
FT                   QLERQLPGALVAMACALRAGAGIAAALRQLVEHGEAPLAQEFGLLLREQRMGVSFDAAL
FT                   ARLARRVSFESMALVAAALRVAAHTGGNLAETLEGIAQTVSARLQLQDRVRALCAQGRM
FT                   QAWIVGALPPVLMGVLGRLQPEAMAALWHTLYGWAALALIVVLEGTGIWLIRRIVAIDV
FT                   "
FT   misc_feature    155392..155457
FT                   /note="Signal peptide predicted for BB2099 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.995) with cleavage site
FT                   probability 0.579 between residues 22 and 23"
FT   misc_feature    join(155401..155460,155521..155589,155617..155685,
FT                   156061..156114,156142..156210)
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB2099 by TMHMM2.0 at aa 4-23, 44-66, 76-98, 224-241 and
FT                   251-273"
FT   CDS             156248..157144
FT                   /transl_table=11
FT                   /locus_tag="BB2100"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248)
FT                   BP2524A+BP1081"
FT                   /db_xref="InterPro:IPR018076"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK6"
FT                   /protein_id="CAE32596.1"
FT                   /translation="MWLWLAASVAGVAAGWACLALLRGWCGAGWAAACGPEPAPGPPAW
FT                   RLPRVWRCCRPWLGPLLPWCDRLLSWRMRAVIERAIVRAGCDGLVRPCEVAALSLWMAW
FT                   LGGVVAVTAASLADGWRAWLPLAPAACAAGAWPALWLRRCAARRRQRIARELPFILDLM
FT                   TLCAEAGLGMHGALQQAASHGPPGPLRELLVQALCDMRAGMPRRQAMQALAARADSPPV
FT                   RAWVGALAHADAQGMSLGPMLRGLATRYRAERHQRAERLAMEAPVKMLLPLIACIFPCT
FT                   FIVLAFPIGYALLQGGL"
FT   misc_feature    156248..156340
FT                   /note="Signal peptide predicted for BB2100 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.981) with cleavage site
FT                   probability 0.742 between residues 31 and 32"
FT   misc_feature    join(156257..156325,156530..156598,156611..156670,
FT                   157055..157123)
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB2100 by TMHMM2.0 at aa 4-26, 95-117, 122-141 and 270-292"
FT   misc_feature    156317..156349
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(157366..158166)
FT                   /transl_table=11
FT                   /locus_tag="BB2101"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1083"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK5"
FT                   /protein_id="CAE32597.1"
FT                   /translation="MQAVSLPAISGWQWVRDGLRLFMKQPLAMFTWAMAISLLLLFATY
FT                   TPLVGPLLFVALMPSITLMTLSACKHVEAGRVMLPSMWLQPLKKPGVFKKLFLMGMLYV
FT                   GLCLAAGLLAFLPFSSSLAEGVRMASANNLAPIMTAMRAPLLVFTALYVIIAAVFWHAP
FT                   VLVGWHGLRLLQALFFSGIACWRNKWPFLVYGVVWILVFLFIDLCIGLLIGMGVPDTLA
FT                   GTLQVPVTIIAGGVLYCSFYPAYTSVFGVNDAHAGLDNSDSAHA"
FT   misc_feature    complement(join(157414..157482,157525..157593,
FT                   157654..157722,157813..157881,158002..158070))
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB2101 by TMHMM2.0 at aa 33-55, 96-118, 149-171, 192-214
FT                   and 229-251"
FT   CDS             complement(158210..159196)
FT                   /transl_table=11
FT                   /gene="thrB"
FT                   /locus_tag="BB2102"
FT                   /product="homoserine kinase"
FT                   /EC_number="2.7.1.39"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1084"
FT                   /db_xref="GOA:Q7WKK4"
FT                   /db_xref="InterPro:IPR002575"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK4"
FT                   /protein_id="CAE32598.1"
FT                   /translation="MAVFTSVSDQDARTLLARFDLGDLVSLRGITAGIENTNFFLNTTR
FT                   GEYVLTLFEVLTQEQLPFYIELMYHLAARGIPVPQPQTLRDGTRLTTLHGKPCAIVTRL
FT                   PGGYEPAPGPDHCRLAGATLARAHLAGQDFPLRQPNLRGLPWWQATAPKVLPFLEPGQA
FT                   RLLEAELADQQAHAATALWQSLPSGPAHCDLFRDNVLFAGTFDDPLMGGFIDFYFAGCD
FT                   TWLFDVAVSVNDWCIVRDTGEFVPELVHGWLQAYAEVRPFTDAERQAWPVMLRAAALRF
FT                   WLSRLYDFYLPRPAQTLKPHDPRHFERVLQARHRHPAPDLPKSEAAA"
FT   misc_feature    complement(158390..159136)
FT                   /note="HMMPfam hit to PF01636, DE Phosphotransferase enzyme
FT                   family, score 1.8e-13"
FT   CDS             159336..160349
FT                   /transl_table=11
FT                   /locus_tag="BB2103"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1085"
FT                   /db_xref="GOA:Q7WKK3"
FT                   /db_xref="InterPro:IPR018517"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK3"
FT                   /protein_id="CAE32599.1"
FT                   /translation="MNSPDWRLCVAPMIDVTDRHCRYFHRLLAPRARLYTEMITTGALL
FT                   HGDVARHLDFDAAEHPVALQLGGSEPDALAQAARLGRQWGYDEINLNCGCPSERVQRGA
FT                   FGACLMAEPGLVADCMKAMQDAVDIPVTVKHRLGLDYDESYGFVRDFVGQIYDTGCRVF
FT                   VVHARNAVLKGLSPKDNREIPPLRYDVARQLKRDFPDCVIVLNGGLADAQAARAVAGEF
FT                   DGVMLGRAAWHTPRVLSEVSLQWWPAIRLPSDAQVVDAMMQYAATQIARGVPLRVMTRP
FT                   LLGLVNGQAGARRWRRLLSDPVRLAANDPSLLYEAWRSLQGAPRERDACADPLPAV"
FT   misc_feature    159360..160298
FT                   /note="HMMPfam hit to PF01207, DE Dihydrouridine synthase
FT                   (Dus), score 1.1e-81"
FT   misc_feature    159600..159656
FT                   /note="PS01136 Uncharacterized protein family UPF0034
FT                   signature."
FT   CDS             complement(160360..160818)
FT                   /transl_table=11
FT                   /locus_tag="BB2104"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1087"
FT                   /db_xref="InterPro:IPR000644"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK2"
FT                   /protein_id="CAE32600.1"
FT                   /translation="MLKVSEILRVKGDTLYTASPDTHVSVAVQTMSEQDIGSLVIMESG
FT                   MLAGMLTFREIIRHIDQHGGNVGDTTIRAIMDDAPVSVSPNTSADEVQRLMLEKHARYI
FT                   PVMDGPTLLGVISFYDMAQAIVAAQQFENNMLKAYIRDWPMESAPSKP"
FT   misc_feature    complement(160441..160599)
FT                   /note="HMMPfam hit to PF00571, DE CBS domain, score
FT                   2.9e-09"
FT   misc_feature    complement(160636..160794)
FT                   /note="HMMPfam hit to PF00571, DE CBS domain, score
FT                   7.1e-07"
FT   CDS             complement(160855..162168)
FT                   /transl_table=11
FT                   /locus_tag="BB2105"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1088"
FT                   /db_xref="GOA:Q7WKK1"
FT                   /db_xref="InterPro:IPR017039"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK1"
FT                   /protein_id="CAE32601.1"
FT                   /translation="MEPHAESAAAGQAAPPEKRRASWFTRMGRVVRFAGQRADEQKLLQ
FT                   VASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALEDFLANSLMPPSVSDNIMDYLN
FT                   QFARQATRLTAIGGAFLIVTSLLLIMTIDKTFNDIWQVTRQRPLPQRALVYWAVITLGP
FT                   VVAGASLWATSFVARESLGLVRDVPEAVSVAISFIPLVLTGLGFAALFVVVPNRRVYWK
FT                   DALVGGFGTAIVLELMKAGFAYYLTRFPAYTVIYGAFATLPIFLLWIYLSWLAVLFGAT
FT                   VAASAPLIRLGRWEINRHAGAPFIDALGVLRVLHAAQGSRPAGRSANALAKRLRLHHDE
FT                   LNAVLEALEDMGLVARTAEQRWVLTCDPRTTTLEPVFDRFLLDRGQPRLRDEPEIAAVA
FT                   AGVLGQGPDPTLADLAGVAQNTDIGPAAAVLQLETGKK"
FT   misc_feature    complement(161299..162054)
FT                   /note="HMMPfam hit to PF03631, DE Ribonuclease BN-like
FT                   family, score 4e-58"
FT   misc_feature    complement(join(161302..161370,161428..161496,
FT                   161533..161601,161644..161712,161773..161841,
FT                   161965..162033))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB2105 by TMHMM2.0 at aa 46-68, 110-132, 153-175, 190-212,
FT                   225-247 and 267-289"
FT   CDS             162186..162557
FT                   /transl_table=11
FT                   /locus_tag="BB2106"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1089"
FT                   /db_xref="InterPro:IPR018643"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKK0"
FT                   /protein_id="CAE32602.1"
FT                   /translation="MNAELNPTLRRGAAACLLALIVLCVAWETVLAPIRPGGSWLFLKA
FT                   LPLAFPLRGVLRGNLYTFQWAAMLVLLYLMEGVVRAMSDPAPLSAALGGVEIVLSGGFF
FT                   LCAILYVRPAKRAARRSRA"
FT   misc_feature    162186..162263
FT                   /note="Signal peptide predicted for BB2106 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.895) with cleavage site
FT                   probability 0.759 between residues 26 and 27"
FT   misc_feature    join(162219..162287,162450..162518)
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB2106 by TMHMM2.0 at aa 12-34 and 89-111"
FT   CDS             162554..164041
FT                   /transl_table=11
FT                   /locus_tag="BB2107"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1090"
FT                   /db_xref="InterPro:IPR003846"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKJ9"
FT                   /protein_id="CAE32603.1"
FT                   /translation="MKWLRLQDLPTDNSFAALPAEFYTRLQPRPPAAPRLLHANAEAAA
FT                   LIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGDGRAHLLGEVRG
FT                   PAGGWELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSLALVVSDDP
FT                   VMRETVETAAVVTRMAPSFVRFGSFEHWSARRQPEQLRVLADYVIDRFYPECRVAGAGR
FT                   LDGEHGEILGLLAAVTRRTALLMADWQAVGFCHGVMNTDNMSILGLTLDYGPYGFMDTF
FT                   QLGHICNHSDSEGRYAWNRQPSVGLWNLYRLASSLHTLAPDPEALRAVLDGYEAVFTQA
FT                   FHGRMAGKLGLPQFLPEDETLLDDLLQLMHQQGADFTLAFRRLGEAVRGQRQPFEDLFI
FT                   DRAAAGAWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEI
FT                   DILLKLLRNPYKQQPGYDAYAGLAPDWAAGLEVSCSS"
FT   misc_feature    162590..163960
FT                   /note="HMMPfam hit to PF02696, DE Uncharacterized ACR,
FT                   YdiU/UPF0061 family, score 1.3e-125"
FT   CDS             164134..164910
FT                   /transl_table=11
FT                   /locus_tag="BB2108"
FT                   /product="probable two-component response regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1091"
FT                   /db_xref="GOA:Q7WKJ8"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKJ8"
FT                   /protein_id="CAE32604.1"
FT                   /translation="MVFQCGRSDGFRVEVPMLVADGLLRIGLLEDDEDFRDELALGLGG
FT                   YGFNVVCACGDAPSLYRFLQSQSCDIVILDANVPGEDGFSVATRLRAQSTTGIVMLTGR
FT                   GALEDRVRGLEGGADVYLTKPVDLLELSSVIRSLARRMRLARGAQGQAPASAGDTQRGV
FT                   GGWSLQEGGWVLVGPDGVSLHLNAQERIFMTSLLQSGGDAVTRQMLAEAFQPGNPDDFE
FT                   PRRVDVMVSRLRAKAQSAGFKLPVLSVRGQGYVFAA"
FT   misc_feature    164203..164562
FT                   /note="HMMPfam hit to PF00072, DE Response regulator
FT                   receiver domain, score 5.7e-27"
FT   CDS             complement(164892..167774)
FT                   /transl_table=11
FT                   /locus_tag="BB2109"
FT                   /product="probable two-component histidine kinase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1092"
FT                   /db_xref="GOA:Q7WKJ7"
FT                   /db_xref="InterPro:IPR001633"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKJ7"
FT                   /protein_id="CAE32605.1"
FT                   /translation="MSSVPQPAFVMSISRRLFLSVVLLAGLLVIGTQAAGLAANYRASV
FT                   ERQKRHVETAAASLAWVLSQSHTTPAQWQTLATDLQRHGGYALVRIQEHYTGRMIEAGQ
FT                   LSEAPARADGSLQQGRASQIVATRTFRSADGTYVGSVAVYNPVIPILEAPFLTESVAQL
FT                   VLIVAGLLIWYSYMSRLHDRLQRGPLKRLADNLAHIGQAGVDPKLAEGLPRELQPLGTA
FT                   LVQSHQRVHDQLRQQRARIDALENETYHDPVTRLPNRKFFNESLRRAVQRDGGVDGHLL
FT                   IFRQRDMAEINRQMKREATDQWLRLACAQLSKTIKEQAGAGAVLVRINGSDFAALLPGL
FT                   PSPRAAVLAERLRRELRVLRLPLRTHGWCRWAMALTPYTVGEQVSDILARLDHALMRAE
FT                   IAESDEVEPAFSQTGNRIDGEYGWQDILTRALEQHRFFLTLYPRQDAEGQVLHTEAQLT
FT                   LRDQDSPEPLHAQLFMPPAARLGLSADCDIQAIRMSMDQLVARDGDMVVRVSLPSLEQA
FT                   HFLKRLEDVLRDRPEQAGHLIIEIDAHGLVDYFHNVQALCEIAARTGVRVGVRRLSEQF
FT                   AALERLHQLPLAYLKIGGSFVQGITRSPGNQQLADTVIQVARTLDIPAYAEDAEEPAAR
FT                   ELLQAIGFRLMQEADNADFLAPRHNWIADLPAAAPAAAEDNGDTAAHAPTRTRATDGRP
FT                   WPPHELGMQRKRQEQSDRRLAEVARALEAQRQVHALLSHELRTPAATISAAAQSLEIIL
FT                   AGSGQEVDSRLARIRRAVTRMIELMNQVLSPERLRDQALTPRPEPIELGELARDTVEGM
FT                   RLDTAHPLVLNAEAAVPAWCDPLLTALVLRNLIHNAVKYSPADQPVHIDVGLSYGAHGA
FT                   TAWVAVTDRGPGISDDESQRIFEEHYRRAAHRETPGSGLGLHLARQICQSQDGTLTVQT
FT                   QLGQGARFVMTLPTPGQAYTDGGNAQAANT"
FT   misc_feature    complement(164940..165281)
FT                   /note="HMMPfam hit to PF02518, DE Histidine kinase-, DNA
FT                   gyrase B-, and HSP90-like ATPase, score 7.4e-27"
FT   misc_feature    complement(165405..165608)
FT                   /note="HMMPfam hit to PF00512, DE His Kinase A
FT                   (phosphoacceptor) domain, score 0.00057"
FT   misc_feature    complement(165816..166520)
FT                   /note="HMMPfam hit to PF00563, DE EAL domain, score
FT                   5.6e-10"
FT   misc_feature    complement(166560..167045)
FT                   /note="HMMPfam hit to PF00990, DE GGDEF domain, score
FT                   1.7e-06"
FT   misc_feature    complement(167673..167774)
FT                   /note="Signal peptide predicted for BB2109 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.992) with cleavage site
FT                   probability 0.623 between residues 34 and 35"
FT   CDS             167994..169370
FT                   /transl_table=11
FT                   /locus_tag="BB2110"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1460"
FT                   /db_xref="InterPro:IPR001633"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKJ6"
FT                   /protein_id="CAE32606.1"
FT                   /translation="MGLDDLVGQWLLPGMALAAVGVFFCIKGYLLRRQMARDALTDALT
FT                   VGELRRRVHALVLGKRQRVYSGAMFLVEVVHHPELSAMLGLEDNKLLLAMIAQRLQMQS
FT                   DYFQVARHSSDSFMVWAPDLDPRSARDVAPEVLDALSQPYELRGQPLIVGFRLSGALYA
FT                   QHGACFDELERSLHIAMLHLDESAGAAWNMFEPSMLEHQRHYQGLEHDLRVALVSSSMD
FT                   QFEVCYQPVCDSVTGTIYGCEALLRWHHPVHGDVSPALVIELAERTGLIVPLGAWVLET
FT                   ACSRAITWPAAWRLHVNVSVRQMYADELPAQVALALAASRLSAQRLVLEITESLFIQQY
FT                   ERHVATLNGMRAKGVRVALDDFGAGYSSLTHLRRLPIDWVKLDRGFVAEIEFDAVSREV
FT                   VSALMGMCRALGLAVVAEGVETPAQREILKALGCREMQGFLLGRPVSAERIRELGAAVS
FT                   "
FT   misc_feature    168021..168086
FT                   /note="1 probable transmembrane helix predicted for BB2110
FT                   by TMHMM2.0 at aa 10-31"
FT   misc_feature    168603..169340
FT                   /note="HMMPfam hit to PF00563, DE EAL domain, score
FT                   3.4e-104"
FT   CDS             169412..170473
FT                   /transl_table=11
FT                   /gene="aroC"
FT                   /locus_tag="BB2111"
FT                   /product="chorismate synthase"
FT                   /EC_number="4.2.3.5"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1462"
FT                   /db_xref="GOA:Q7WKJ5"
FT                   /db_xref="HSSP:1Q1L"
FT                   /db_xref="InterPro:IPR000453"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKJ5"
FT                   /protein_id="CAE32607.1"
FT                   /translation="MSGNTLGTLFCVTNFGESHGPAIGCVVDGCPPGLPLEAADIQAEL
FT                   DRRRPGTSRHVTQRQEADQVEILSGVYEGVTTGTPIGLLIRNTDARSKDYSNIADTFRP
FT                   GHADFAYWRKYGVRDPRGGGRSSARLTAPTVAAGAIAKKWLAGQFGVRVRGYMSQLGPI
FT                   AIPFSSWDDVPGNAFYAPNAAVVPELEAYMDQLRRDGDSVGARIEVVAEGLPAGWGEPI
FT                   YDRLDADIAHAMMGLNAVKGVSLGAGFESIAQRGSEHGDEITPEGFASNHAGGVLGGIS
FT                   TGQPITVSLAIKPTSSIRVERRSVNRAGEPVMVQTLGRHDPCVGIRATPIAEALLALVL
FT                   IDHALRQRAQCGG"
FT   misc_feature    169439..170455
FT                   /note="HMMPfam hit to PF01264, DE Chorismate synthase,
FT                   score 3.5e-185"
FT   misc_feature    169457..169504
FT                   /note="PS00787 Chorismate synthase signature 1."
FT   misc_feature    170366..170416
FT                   /note="PS00789 Chorismate synthase signature 3."
FT   CDS             170507..171343
FT                   /transl_table=11
FT                   /locus_tag="BB2112"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1463"
FT                   /db_xref="GOA:Q7WKJ4"
FT                   /db_xref="InterPro:IPR006025"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKJ4"
FT                   /protein_id="CAE32608.1"
FT                   /translation="MKSVIQTFLRTAAVAGLALLAGCAGVSTTQSGAIGVDRTQYMSSL
FT                   VPEQALVQEAGQQYAEIVQEARAKGLLDRDPAQLSRVRAISQRLIAQTGVFRADAANWP
FT                   WEVHVLSVDEVNAWCMPGGKIAVYTGLLAQIKPTDDELAAVLGHEIAHALREHARERVS
FT                   QQMATSIGLSVLSMATGSPGASDLGGKLTEVMFTLPNSRTHETEADRMGVELAARAGFD
FT                   PRAAVTLWQKMGAADGNAPPEFLSTHPSASTRIGELQQASQKVLPLYEQARGQAAK"
FT   misc_feature    170507..170593
FT                   /note="Signal peptide predicted for BB2112 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.574 between residues 29 and 30"
FT   misc_feature    170540..170608
FT                   /note="1 probable transmembrane helix predicted for BB2112
FT                   by TMHMM2.0 at aa 12-34"
FT   misc_feature    170543..170575
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    170939..170968
FT                   /note="PS00142 Neutral zinc metallopeptidases, zinc-binding
FT                   region signature."
FT   CDS             complement(171353..171895)
FT                   /transl_table=11
FT                   /gene="mobB"
FT                   /locus_tag="BB2113"
FT                   /product="molybdopterin-guanine dinucleotide biosynthesis
FT                   protein B"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1464"
FT                   /db_xref="GOA:Q7WKJ3"
FT                   /db_xref="HSSP:1P9N"
FT                   /db_xref="InterPro:IPR004435"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKJ3"
FT                   /protein_id="CAE32609.1"
FT                   /translation="MTRIIGFAGWSGAGKTQLLSRLIPCLKARGHSVSTLKHAHHTFDI
FT                   DTPGKDSFRHREAGATEVLIASSARWALMHELRDEPEPELGELLARMCPVDFILVEGFK
FT                   RNAHIKIEVHRHANGKPWLFPDDPSIGAIACDAAPPHGTLPRVALDDYDAVADLVERLA
FT                   WPLDTTIARLAAPVSPA"
FT   misc_feature    complement(171491..171889)
FT                   /note="HMMPfam hit to PF03205, DE Molybdopterin guanine
FT                   dinucleotide synthesis protein B, score 1e-32"
FT   misc_feature    complement(171848..171871)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(171909..173201)
FT                   /transl_table=11
FT                   /gene="moeA"
FT                   /gene_synonym="chlE"
FT                   /gene_synonym="bisB"
FT                   /gene_synonym="narE"
FT                   /locus_tag="BB2114"
FT                   /product="molybdopterin biosynthesis protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1465"
FT                   /db_xref="GOA:Q7WKJ2"
FT                   /db_xref="HSSP:1G8L"
FT                   /db_xref="InterPro:IPR005110"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKJ2"
FT                   /protein_id="CAE32610.1"
FT                   /translation="MNHAPTPSLEEIASCVNGYDPDALPISQAREFIDRLVPRLNAVEW
FT                   LPLRSALGRVLAHDIVSTLNVPAHDNSAMDGYAFAGAELAGGADTPLRVVGSGLAGDNY
FT                   QGTVGPGQCVRIMTGAVMPDGLDTVIPQEFVRQDGDGIVVPAGAVRPGDNRRLAGEDLA
FT                   LGENALTAGRVLRPADIGLLASLAQAEVPVVRRLRVAFFSTGDELRSIGEPLDPGCVYD
FT                   SNRYTIWSMLQRLGVEVLDLGVVRDDPHALETAFSAAADNADVVITSGGVSVGEADYTK
FT                   KVMAKLGDVLFWKIAMRPGRPLAIGRIHSNGRDAILFGLPGNPVAVMVTFYALVRDALL
FT                   AMSGATAQPMPWLRCVAAQPIRKKPGRTEYQRAIVTPAPGGGWQAAVTGSQGSGILRSM
FT                   SQANGLLVLHHDQGNIAAGEPVDVLPFDGVI"
FT   misc_feature    complement(171921..172142)
FT                   /note="HMMPfam hit to PF03454, DE MoeA C-terminal region
FT                   (domain IV), score 1.2e-18"
FT   misc_feature    complement(172191..172616)
FT                   /note="HMMPfam hit to PF00994, DE Probable molybdopterin
FT                   binding domain, score 5.6e-57"
FT   misc_feature    complement(172641..173135)
FT                   /note="HMMPfam hit to PF03453, DE MoeA N-terminal region
FT                   (domain I and II), score 1.1e-57"
FT   CDS             complement(173198..173806)
FT                   /transl_table=11
FT                   /gene="mobA"
FT                   /gene_synonym="mob"
FT                   /gene_synonym="chlB"
FT                   /gene_synonym="narB"
FT                   /locus_tag="BB2115"
FT                   /product="molybdopterin-guanine dinucleotide biosynthesis
FT                   protein A"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1466"
FT                   /db_xref="GOA:Q7WKJ1"
FT                   /db_xref="HSSP:1E5K"
FT                   /db_xref="InterPro:IPR013482"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKJ1"
FT                   /protein_id="CAE32611.1"
FT                   /translation="MQATLMIDKNDITGLILAGGRASRMGGVDKGLQNFHGMPLAMHTL
FT                   LRLGPQVGDIMINANRNLAAYEAMGAPVWPDALPDFPGPLAGFAAGLERCETPYMVTAP
FT                   CDTPNFPADMVSRLADALSAEDAQIAMAATSADGALRTQPVFCLMRIDLLDSLLEFLHS
FT                   GQRKTEIWANQHRCAIVRFDDAQAFAGANTLAELRQLQS"
FT   CDS             173943..175040
FT                   /transl_table=11
FT                   /locus_tag="BB2116"
FT                   /product="putative iron sulfur binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1467"
FT                   /db_xref="GOA:Q7WKJ0"
FT                   /db_xref="InterPro:IPR019591"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKJ0"
FT                   /protein_id="CAE32612.1"
FT                   /translation="MVASESILQALQTVIDPNTGKDLVTTRAIRNLEVNGADVTFDAQL
FT                   GYPAKSQIPALRRALIAAARGVAGVDNVSVNMQSVIETHAVPRGIALLPNVKNVIAVAS
FT                   GKGGVGKSTTAVNLALALAAEGARVGLLDADIYGPSQAQMMGIEGRPQSEDGKTMEPLE
FT                   NYGVQVMSIGFLVDADEAMIWRGPMAVQALEQLLRQTNWKNLDYLVIDMPPGTGDIHLT
FT                   LSQKVPVTGAVIVTTPQDIALLDARKGVKMFEKVGVPIVGVVENMAVHVCSQCGHAEHI
FT                   FGQGGGQRMAQDYGLAYLGALPLDIDIRQQADGGRPSVVADPDGEVAGLYKDVARQVAV
FT                   AVAAMGKDYSSKFSSISISRAPADG"
FT   misc_feature    173949..174173
FT                   /note="HMMPfam hit to PF01883, DE Domain of unknown
FT                   function DUF59, score 0.0046"
FT   misc_feature    174255..174278
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    174447..174755
FT                   /note="HMMPfam hit to PF00991, DE ParA family ATPase, score
FT                   0.0028"
FT   misc_feature    174546..174596
FT                   /note="PS01215 Mrp family signature."
FT   CDS             175047..175607
FT                   /transl_table=11
FT                   /locus_tag="BB2117"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1468"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI9"
FT                   /protein_id="CAE32613.1"
FT                   /translation="MSDTLPLSMEVAVVMRKERIVGEMSRWQDSRWVLEDVVPDEPGFG
FT                   RAPRMLYHDENQQRWLHPGLTVRLFKDDAEGYLLNVSAPAPCWFVLWRMEEEPGVASEP
FT                   LARPEIVTLSYHDAGRWLDAQETVEQIPAPAYIVQWLQAFVQAHYVPEPKRRRRPVSFQ
FT                   PLQDRFGNPASVSTTKKRGGGEP"
FT   CDS             175604..176284
FT                   /transl_table=11
FT                   /locus_tag="BB2118"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1469"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI8"
FT                   /protein_id="CAE32614.1"
FT                   /translation="MSQDPAGFIGRWSRRKSEARQQAETAAEPAAGVAQASLADTPLAG
FT                   APAVAARPEEAPERADAAPVQAPGPATDAETDLPLPTLDDVRALTLDSDFSRFVAGGVS
FT                   PDVKNAALKKLFTDPHYNVMDGLDVYIDDYTQLEGLPQETVRRMASAKVFKLFEEDEPA
FT                   PGQGEPADGACGPGQQAPGAMAEPDAAPAVPASAPDAIQSALPRDDVAGPAGGPLPDAE
FT                   PRRD"
FT   CDS             176281..178398
FT                   /transl_table=11
FT                   /locus_tag="BB2119"
FT                   /product="putative iron-sulfur binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1470"
FT                   /db_xref="GOA:Q7WKI7"
FT                   /db_xref="HSSP:1FDN"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI7"
FT                   /protein_id="CAE32615.1"
FT                   /translation="MIQPGSPFAMTTLICDCNRTMPLQPEALGQALGETLTLHSTLCRR
FT                   EAGAFQAAIRDGQDVVVACTQEKRLFGELGGATQGAVSPVRFVNIRETGGWSRDAAQAM
FT                   PKLAALLAAAHLPEPDPVATVTYKSGGRLLIIGPLDQAEQAAALLDDVLDVTLFGQGPG
FT                   RAGGAQERRYPVLSGRIDSLQGWLGAFELRWTRGNPIDLDLCTRCNACISACPDGAIGL
FT                   DYQVDTARCTSHRACEQACSVAGAIDFSRSPENFTDQYDLVLDLGGTPLFTQHAPPQGY
FT                   FTWDGQAPATLLRLRELVGEFEKPKFFDYRQQLCAHSRNETVGCRACIDICSARAISSD
FT                   SHHQRIVVNPNLCVGCGACTTVCPSGALTYAYPRATDQGSKLRTLLATYAKAGGQDAML
FT                   LLHSQQEGARLVEQLGRQAALKQADGVPANVIPMALWHTASVGLDLWLSAVAFGARHIA
FT                   VLTTAEEAPQYLEGLQAQFAQAQAILNGLGYAGTHLSLVPADTPQALDAALRQLAPAQG
FT                   PAVAARHAVVQEKRSTLDLALDHLVAHAPAPAPESIALPAGEPGAGAPFGTVAVDSDAC
FT                   TLCMSCVSACPSNALLDNPQSPQLRMVEKNCVQCGLCATTCPENAITLVPRLLLAPRRR
FT                   EAVVLNESAPFHCVRCNKAFGTQKGVEAMLGRLGSHAMFQGAALERLKMCGDCRVIDLY
FT                   SAENETRITDL"
FT   misc_feature    176872..176943
FT                   /note="HMMPfam hit to PF00037, DE 4Fe-4S binding domain,
FT                   score 5.1e-05"
FT   misc_feature    176893..176928
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT   misc_feature    177316..177387
FT                   /note="HMMPfam hit to PF00037, DE 4Fe-4S binding domain,
FT                   score 2.8e-08"
FT   misc_feature    177337..177372
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT   misc_feature    177985..178056
FT                   /note="HMMPfam hit to PF00037, DE 4Fe-4S binding domain,
FT                   score 6.2e-06"
FT   misc_feature    178006..178041
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT   misc_feature    178078..178149
FT                   /note="HMMPfam hit to PF00037, DE 4Fe-4S binding domain,
FT                   score 9e-05"
FT   misc_feature    178099..178134
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT   CDS             178395..179024
FT                   /transl_table=11
FT                   /locus_tag="BB2120"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1471"
FT                   /db_xref="GOA:Q7WKI6"
FT                   /db_xref="InterPro:IPR010395"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI6"
FT                   /protein_id="CAE32616.1"
FT                   /translation="MNVSVTSAAIAAPGFDEEVARAEIYGLLAQLYYAPPPSDLLAQLR
FT                   AAPRQAPDQGGFLEASWQALVACAAEMGDDAVRAEYDALFGGVGKPDIYLFASHYLTGF
FT                   LNEKPLVGLRDDLAALGLRRDAAMSETEDHIAYLCEVMRYLIAGDDVAVANLTQQRQFH
FT                   ARHLRPWVADLCDAIAAHPAARFYGALAEFTRAFFSVEAQAFDMMA"
FT   CDS             179400..182369
FT                   /transl_table=11
FT                   /gene="fdhA"
FT                   /locus_tag="BB2121"
FT                   /product="formate dehydrogenase large subunit precursor"
FT                   /EC_number="1.2.1.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1472"
FT                   /db_xref="GOA:Q7WKI5"
FT                   /db_xref="InterPro:IPR006311"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI5"
FT                   /protein_id="CAE32617.1"
FT                   /translation="MLLTKKTSGAAAGASESHFIQSLRRGMAQALPTMDRRTFLRRSGL
FT                   GVGAGLAATQLALVKRAEAAEGDGKVAIGNTKIEVRRTVCTHCSVGCAVDAVVENGVWV
FT                   RQEPVFDSPINLGAHCAKGASVREHGHGEHRLRYPMKLVNGKYQRISWDTAYEEITAKL
FT                   MQLRKESGPDSVYWIGSSKHNNEQSYLLRKFVSFWGSNNCDHQARICHSTTVAGVANTW
FT                   GYGAMTNSYNDMQNSKVALYIGSNAAEAHPVSMLHMLHAKETGCKMIVVDPRFTRTAAK
FT                   ADQYVRIRSGTDIPFLFGLLYHIFKNGWEDQAYIDARVYGMDEVKADILAKWSPDKVEE
FT                   ACGVDEATMYSVAKTMHENRPGTLVWCMGQTQHSIGNAMVRASCIVQLALGNVGKSGGG
FT                   ANIFRGHDNVQGATDVGPNPDSLPGYYGLAEGSWKHFANTWGVDYEWIKGRYASPAMMT
FT                   KPGITVSRWIDGVLENPDLIDQDTNLRAVFYWGHAPNSQTRGLEMKRAMDKLDLLVVVD
FT                   PYPSATAAMAAMPGKAEDLNPNRAVYLLPAATQFETNGSCTASNRSLQWREKVIDPLWE
FT                   SRTDHMIMHQLAEKLGFGKELSKNYKMQKVKGMDEPVVEDILREINASVWTIGYTGQSP
FT                   ERLKAHMRNMHVFDVKTLRAKGGKDAETGYDLTGDYFGLPWPCWGNPSLKHPGTANLYD
FT                   TSLHVMDGGGNFRANFGVERNGVNLLAADGSHSKGADLTTGYPEFDHVLLKKLGWWEDL
FT                   TPEEQKAAEGKNWKTDPSGGIIRVTMKVHGCHPFGNARARAVVWNFPDAIPQHREPIYG
FT                   TRPDLVAKYPTHNDLKTFWRLPTLYTSLQQKNVAEKLYEKFPIILTSGRLVEYEGGGEE
FT                   TRSNPWLAELQQESFVELNPKAAADRGIRNGDRVWVLTPTGARLNVQALVTERVGPDTA
FT                   FMPFHFSGHWQGVDMLASYPEGAAPIVRGEAVNTGTTYGYDSVTMMQETKTTICNIEKA
FT                   "
FT   misc_feature    179631..181397
FT                   /note="HMMPfam hit to PF00384, DE Molybdopterin
FT                   oxidoreductase, score 4e-68"
FT   misc_feature    179646..179699
FT                   /note="PS00551 Prokaryotic molybdopterin oxidoreductases
FT                   signature 1."
FT   misc_feature    180564..180587
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    181962..182348
FT                   /note="HMMPfam hit to PF01568, DE Molydopterin dinucleotide
FT                   binding domain, score 1.1e-15"
FT   CDS             182380..183009
FT                   /transl_table=11
FT                   /gene="fdhB"
FT                   /locus_tag="BB2122"
FT                   /product="formate dehydrogenase iron-sulfur subunit"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1473"
FT                   /db_xref="GOA:Q7WKI4"
FT                   /db_xref="HSSP:1FDN"
FT                   /db_xref="InterPro:IPR000813"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI4"
FT                   /protein_id="CAE32618.1"
FT                   /translation="MARMKFVCDAERCIECNACVTACKNEHEVPWGVNRRRVVTLNDGV
FT                   PGEKSISVACMHCSDAPCMAVCPVNCFYRTDEGVVLHNKDTCIGCGYCSYACPFGAPQF
FT                   PSEGAFGVRGKMDKCTFCAGGPEEHGSAEEFEKYGRNRLAEGKLPACAEMCSTKALLAG
FT                   DGDVVADIFRTRVIHRGKGAEVWGWGTVYGSKQAGQPPAADAKAKP"
FT   misc_feature    182395..182466
FT                   /note="HMMPfam hit to PF00037, DE 4Fe-4S binding domain,
FT                   score 0.11"
FT   misc_feature    182617..182688
FT                   /note="HMMPfam hit to PF00037, DE 4Fe-4S binding domain,
FT                   score 1.6e-06"
FT   misc_feature    182638..182673
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT   CDS             183006..183239
FT                   /transl_table=11
FT                   /locus_tag="BB2123"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1474"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI3"
FT                   /protein_id="CAE32619.1"
FT                   /translation="MKTNPRLLLIAAAAVFGLAACTEKPQELHSGVVGKPAYDGTGSNF
FT                   VAPGWKQGDKNSWQQELKVRAQRGQNEYTRVN"
FT   misc_feature    183006..183071
FT                   /note="Signal peptide predicted for BB2123 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.517 between residues 22 and 23"
FT   misc_feature    183036..183068
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             183252..184409
FT                   /transl_table=11
FT                   /gene="fdhC"
FT                   /locus_tag="BB2124"
FT                   /product="formate dehydrogenase subunit C precursor"
FT                   /EC_number="1.2.1.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1475"
FT                   /db_xref="GOA:Q7WKI2"
FT                   /db_xref="InterPro:IPR006471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI2"
FT                   /protein_id="CAE32620.1"
FT                   /translation="MIRSLFAALLASALLATAGAQTAAPSAGAPAMGGIQSANIFEVKP
FT                   DASEQPGYAEQTNAERAKVQPGNNAPMWRQVNSGQPGYSSLPASEAPEAGVLIQRFVQY
FT                   PGSQYTTAGEAWRQVRNNWLIPYGGGLLLIVLVAIALFFLAKGPMKLREAETGRRIERF
FT                   TYFERAAHWVNATAFVILALTGIVIAFGKFFLLPIMGSAAFGWMTWLLKTVHNFVGPVF
FT                   AVSLLVVILTFIKDNLPRRDDLIWLRKGGGLITGAHVPSHRFNAGEKIMFWVGMLFLGA
FT                   LAVASGLFLDQVFPGLSYVRGNMQIAHMVHAASVVLMMCMIMGHIYLGTIGMRGAFKAM
FT                   KTGYVDETWAREHHELWYDDIKAGKIPAQRTPDKSAKRPTRPAGA"
FT   misc_feature    183252..183320
FT                   /note="Signal peptide predicted for BB2124 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.635 between residues 23 and 24"
FT   misc_feature    join(183264..183323,183618..183686,183783..183851,
FT                   183894..183953,184065..184133,184176..184244)
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB2124 by TMHMM2.0 at aa 5-24, 123-145, 178-200, 215-234,
FT                   272-294 and 309-331"
FT   CDS             184432..184806
FT                   /transl_table=11
FT                   /locus_tag="BB2125"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1476"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI1"
FT                   /protein_id="CAE32621.1"
FT                   /translation="MKKIAALIIALAAAPALAKLPPPTPEAAAKAKETAAKAAWSGKMD
FT                   AFRLCRVQDEVAATYFERAKAAGKTTRAPMATPECKDPGPFVYNAEDKPREASGAHSPA
FT                   DTAAKPPSTPAPAAEQKPGQ"
FT   misc_feature    184432..184485
FT                   /note="Signal peptide predicted for BB2125 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.996 between residues 18 and 19"
FT   CDS             complement(184840..185955)
FT                   /transl_table=11
FT                   /locus_tag="BB2126"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1477"
FT                   /db_xref="GOA:Q7WKI0"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKI0"
FT                   /protein_id="CAE32622.1"
FT                   /translation="MRHIEISYSLGPSDPRPALLRNALMDLLSAVREHGSISAAAKALD
FT                   LSYRHVWGELKKWEQTLGRTLIVWDKGQPARLNEFGEKLLWAERQAQARLAPQINALRA
FT                   DLERAFAVAFDDAAHVVPLYASHDNALQALREHAVASAKLHLDIRFTGSVDAISALNEG
FT                   RCVMAGFHTREAPEPGSLAERTYKPMLQPGLHKIIGFAQRSQGLIVARGNPHGITSLAD
FT                   LAASGVRYVNRALGTGTRVLFDELLEQAGLKPAAIAGYERTEPSHAAVAHAIVSGSADA
FT                   GLGIEPAAHRERLDFIPLVRENYFLVCLKSTLDQPSTQALLSILRSPAWQATLAAIPGY
FT                   APAQTGQVLSMRRVLPWWDFARKKVRRARPA"
FT   misc_feature    complement(185641..185934)
FT                   /note="HMMPfam hit to PF02573, DE N-terminal HTH domain of
FT                   molybdenum-binding protein, score 8.9e-06"
FT   misc_feature    complement(185788..185853)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1105.000, SD 2.95 at aa 35-56, sequence
FT                   GSISAAAKALDLSYRHVWGELK"
FT   CDS             186117..186854
FT                   /transl_table=11
FT                   /locus_tag="BB2127"
FT                   /product="putative permease component of ABC transporter"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1478"
FT                   /db_xref="GOA:Q7WKH9"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKH9"
FT                   /protein_id="CAE32623.1"
FT                   /translation="MSESLAIALRLIVSGDPVLMAIVGRSLAVSATACVLACLIGMAAG
FT                   GWLGVARFRGRGIVLTLLNTSLALPSVVVGLAIYLLLSHSGPLGFLGWLFSFKAMVVAQ
FT                   TILVVPIVTALVRQTIEDAERHHGEQLRSLGARPGMLSLLLLWDERFTLLTIVITAFGR
FT                   AVSEVGAVMVVGGNIDGYTRVMTTAIALETSKGDLPLAMALGMLLLLVVLLLNILAALV
FT                   RRWRLRRDTGLAGLYGRHARGMA"
FT   misc_feature    join(186135..186188,186201..186269,186288..186356,
FT                   186384..186452,186573..186641,186714..186782)
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB2127 by TMHMM2.0 at aa 7-24, 29-51, 58-80, 90-112,
FT                   153-175 and 200-222"
FT   CDS             186851..187555
FT                   /transl_table=11
FT                   /locus_tag="BB2128"
FT                   /product="probable ATP-binding component of ABC
FT                   transporter"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1479"
FT                   /db_xref="GOA:Q7WKH8"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKH8"
FT                   /protein_id="CAE32624.1"
FT                   /translation="MTVLFDLRGADVYYGPVHALREAEVRICAGEQVALVGANGSGKST
FT                   LLRLLHGLVTPRAGQARCAARARQAMVFQQPYMLRTSAQNNVALALWLRGMRWREARAR
FT                   ALHALERVELTELAGRNAKSMSGGQQQRLALARAWALEPEVLLLDEPTASLDPHAKRDV
FT                   ELLMEQFARPRDGLAPAMIFSSHNLGQVKRLARRVIYLERGRILADLPVDQFFNGPLPE
FT                   AAALFVKGERIP"
FT   misc_feature    186938..187462
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   2e-52"
FT   misc_feature    186959..186982
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    187223..187267
FT                   /note="PS00211 ABC transporters family signature."
FT   CDS             187552..188370
FT                   /transl_table=11
FT                   /locus_tag="BB2129"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1480"
FT                   /db_xref="GOA:Q7WKH7"
FT                   /db_xref="InterPro:IPR006059"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKH7"
FT                   /protein_id="CAE32625.1"
FT                   /translation="MKILNAIRRGLALAGLATVLAAPLAARAETIVMASTTSTEQSGLF
FT                   GHLLPAFKKASGIDIKVVAQGTGQALDMARRGDADVLFVHDQVAEEKFVADGYAVKRYP
FT                   VMYNDFILVGPAKDPAGVKGNDIVAALGKLAKDNADFISRGDKSGTHAAELRFWKQTGS
FT                   DSKGSGYKECGCGMGPALNMGSSMNAYVLSDRGTWLSFKNPGELKILVEGDKRLFNQYG
FT                   VMVVNPAKFPHVKAKAAQQFVDWVTSKAGQDAIASYQVNGQQLFFPNADK"
FT   misc_feature    187552..187635
FT                   /note="Signal peptide predicted for BB2129 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.862 between residues 28 and 29"
FT   CDS             188624..190057
FT                   /transl_table=11
FT                   /gene="leuC"
FT                   /locus_tag="BB2130"
FT                   /product="3-isopropylmalate dehydratase large subunit"
FT                   /EC_number="4.2.1.33"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1481"
FT                   /db_xref="GOA:Q7WKH6"
FT                   /db_xref="InterPro:IPR015936"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKH6"
FT                   /protein_id="CAE32626.1"
FT                   /translation="MPDVPLKSASMAQTLYDKLWDAHVVHQESDGTCLLYIDRHLLHEV
FT                   TSPQAFEGLALAGRQPWRVGANLAVADHNVPTLNRAQGIEDPISRLQVDTLDDNCAKYG
FT                   ITEFRMNDLRQGIVHVIGPEQGATLPGMTVVCGDSHTSTHGALGALAFGIGTSEVEHVL
FT                   ATQTLLMKKAKSMQINVEGELPFGCTAKDVVLHIIGIIGTAGGTGHAIEFSGSTIRGLS
FT                   VEGRMTVCNMAIEAGARSGMVAVDDKTIDYFRGRPFAPVGVLWDQAVGYWRTLHSDAGA
FT                   RFDRVINVDARDIKPQVTWGTSPEMVLPVDGRVPDPDREKDDVRRSGMERALEYMGLKP
FT                   NTPLVDIRVDRVFIGSCTNSRIEDLRAAAVVARGKRVAANVRQAMVVPGSGLVKQQAER
FT                   EGLDKIFIEAGFEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGQGGRTHLVSP
FT                   AMAAAAAVAGHFVDVRSFR"
FT   misc_feature    188663..190027
FT                   /note="HMMPfam hit to PF00330, DE Aconitase family
FT                   (aconitate hydratase), score 5.7e-245"
FT   misc_feature    189668..189718
FT                   /note="PS00450 Aconitase family signature 1."
FT   misc_feature    189851..189892
FT                   /note="PS01244 Aconitase family signature 2."
FT   CDS             190054..190722
FT                   /transl_table=11
FT                   /gene="leuD"
FT                   /locus_tag="BB2131"
FT                   /product="3-isopropylmalate dehydratase small subunit"
FT                   /EC_number="4.2.1.33"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1482"
FT                   /db_xref="GOA:Q7WKH5"
FT                   /db_xref="InterPro:IPR000573"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKH5"
FT                   /protein_id="CAE32627.1"
FT                   /translation="MIQDSNMQAFTQHEGLVAPLDRENVDTDLIIPKQFLKSIKRAGFG
FT                   PNLFDELRYLDHGEPGMDNSKRPLNPDFVLNQPRYQGASVLLARKNFGCGSSREHAPWA
FT                   LTQYGFRAIIAPSYADIFFNNSFKNGLLPIVLGELEVARLFDEVKAFPGFKLNIDLERQ
FT                   VVIAPDGRELGFDIEPFRKYCLLNGLDDIGLTLRQADKIRAFEAERLARHPWLESRPVA
FT                   "
FT   misc_feature    190072..190605
FT                   /note="HMMPfam hit to PF00694, DE Aconitase C-terminal
FT                   domain, score 5e-68"
FT   CDS             190804..191880
FT                   /transl_table=11
FT                   /gene="leuB"
FT                   /locus_tag="BB2132"
FT                   /product="3-isopropylmalate dehydrogenase"
FT                   /EC_number="1.1.1.85"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1483"
FT                   /db_xref="GOA:Q7WKH4"
FT                   /db_xref="InterPro:IPR004429"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKH4"
FT                   /protein_id="CAE32628.1"
FT                   /translation="MTHQIAVLPGDGIGPEIVEQAERVLKALDLPLELRQAPVGGAAFD
FT                   QFEHPLPPATLELAQGSHAVLFGAVGDWKYDTLPREFRPEQAILGLRKALGLFANLRPA
FT                   ILYPELASASSLKPEIVSGLDILIIRELTGDIYFGTPRGVRTAADGAFAGEREGYDTMR
FT                   YAESEVRRIARIGFESARKRNKKLCSVDKANVLETSQFWRDLVIEVSRDYPDVELSHMY
FT                   VDNAAMQLVRNPRQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLNAAGQGLYEPSH
FT                   GSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADGLRTADIHEAG
FT                   TTKVSTSQMGDAVLKALG"
FT   misc_feature    190813..191862
FT                   /note="HMMPfam hit to PF00180, DE
FT                   Isocitrate/isopropylmalate dehydrogenase, score 6.8e-196"
FT   misc_feature    191533..191592
FT                   /note="PS00470 Isocitrate and isopropylmalate
FT                   dehydrogenases signature."
FT   CDS             192067..193197
FT                   /transl_table=11
FT                   /gene="asd"
FT                   /locus_tag="BB2133"
FT                   /product="aspartate-semialdehyde dehydrogenase"
FT                   /EC_number="1.2.1.11"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1484"
FT                   /db_xref="GOA:Q7WKH3"
FT                   /db_xref="HSSP:1BRM"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKH3"
FT                   /protein_id="CAE32629.1"
FT                   /translation="MTQAVGLVGWRGMVGSVLMQRMRDENDFALIEPVFFSTSNAGGAA
FT                   PAWAEGAGPLQNAYDIDALKKLPIIVTAQGGDYTSEVYPKLRGAGWQGIWIDAASTLRM
FT                   ADDAIIVLDPVNRPVIDAALKRGVRNFVGGNCTVSCMLMGLAGLFNNDLVEWMTSMTYQ
FT                   AASGGGAQHMRELLTQFGLLNQAVKPLLDDPAAAILDIDRGVLARQQDPSLPQEHFGVP
FT                   LGGNLIPWIDKDLGDGMSREEWKAEAETNKILGRGAAFGTPATPIDGLCVRIGAMRCHS
FT                   QALTIKLKRDVPLDEIEDLIAAGTQWAKVVPNTKEDTVKALTPVAVTGTLDIPVGRLRK
FT                   LSMGPQYLGAFTVGDQLLWGAAEPLRRMLRIALAEA"
FT   misc_feature    192070..192462
FT                   /note="HMMPfam hit to PF01118, DE Semialdehyde
FT                   dehydrogenase, NAD binding domain, score 1.1e-46"
FT   misc_feature    192487..193143
FT                   /note="HMMPfam hit to PF02774, DE Semialdehyde
FT                   dehydrogenase, dimerisation domain, score 2.5e-73"
FT   misc_feature    192865..192909
FT                   /note="PS01103 Aspartate-semialdehyde dehydrogenase
FT                   signature."
FT   CDS             193248..195032
FT                   /transl_table=11
FT                   /locus_tag="BB2134"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1485"
FT                   /db_xref="GOA:Q7WKH2"
FT                   /db_xref="InterPro:IPR020012"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKH2"
FT                   /protein_id="CAE32630.1"
FT                   /translation="MSQARRFRRQGPRVCESWPIHYTFPLHLPAIRSDHGILINMRSTL
FT                   RPLQPARRSQALSWALVLALGAGATGAEAARLGHARVVSPPGAALQVVVPLLELSADDL
FT                   ATLQVSLADEAAWRQAGLTPPVPLSSATVRIEPGADASRRNVRISSSQPPAGNAVDVLL
FT                   DLRSGAGQRQVQVTILVPPRGSAARVAPASVGTPAPAGQASAGSIDVRRGDTLFGIAQR
FT                   NAVAGASVYQMLVALWRANPEAFIQNNMNLVRAGETLDIPDAATVRAIDPAEARRIFAQ
FT                   HAEAFARYRGRAGALAAGGAAVSGTGEAGAGRLGSAAQAEAAGAATAQDRLRLSSAQGG
FT                   ANAQADAAGDARASSGRALDDAQQRVEKLQSNVDALSQAAGAGKTASGEGSASANASAG
FT                   AGGQPGADGKAGADGKPGADGRPGADGKPGADGKPGGAAAGAGAATQAGAASAGSTGAN
FT                   GAAAGSAGAGAAGSGPAAAPGAAGSASGNASGLSLPGGAAGQGGEAAKGESTQGGMPGW
FT                   LADNLLAIVTAVLALIVFIVAWALRRAGARRDDDDEASAAYPEPTLDTAALTRKLDSIS
FT                   LDLDEPPTDEPRPGGKRT"
FT   misc_feature    194811..194870
FT                   /note="1 probable transmembrane helix predicted for BB2134
FT                   by TMHMM2.0 at aa 522-541"
FT   CDS             195036..195848
FT                   /transl_table=11
FT                   /gene="truA"
FT                   /gene_synonym="hisT"
FT                   /gene_synonym="asuC"
FT                   /locus_tag="BB2135"
FT                   /product="tRNA pseudouridine synthase A"
FT                   /EC_number="4.2.1.70"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1486"
FT                   /db_xref="GOA:Q7U386"
FT                   /db_xref="InterPro:IPR020094"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7U386"
FT                   /protein_id="CAE32631.1"
FT                   /translation="MSRIALGLAYDGSAWQGWQTQPHGVTVQDQVEAALASFAGGGGPV
FT                   ATVCAGRTDTGVHAAMQVIHLDTDLQRRDESWVRGVNAFLPPSIVVQWARPVSEAFHAR
FT                   FSARSRTYVYLLWRGRVRPALWAGRAGWAFQPLDVPAMRAAARTLLGEHDFSSFRSSQC
FT                   QARHPVRTLHRLDIDERGAFLVFTLRANAFLHHMVRNLIGALLQVGQGRESVAWMDALL
FT                   RARDRRLGAPTFMPDGLYLSAIEYPAEFGFDELDGGTMLLSPFTGALG"
FT   misc_feature    195051..195353
FT                   /note="HMMPfam hit to PF01416, DE tRNA pseudouridine
FT                   synthase, score 5.4e-28"
FT   misc_feature    195468..195776
FT                   /note="HMMPfam hit to PF01416, DE tRNA pseudouridine
FT                   synthase, score 5.1e-26"
FT   CDS             195993..197087
FT                   /transl_table=11
FT                   /gene="smoM"
FT                   /locus_tag="BB2136"
FT                   /product="putative periplasmic solute-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1487"
FT                   /db_xref="GOA:Q7WKH1"
FT                   /db_xref="InterPro:IPR018389"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKH1"
FT                   /protein_id="CAE32632.1"
FT                   /translation="MQRRSFLKQATLGAAAGGAALAAPALAQDSPTIHWRLASSFPRSA
FT                   DAIFTGGENLAKYVSEATDGKFSIRAFPAGEIVPALQVLDAVQNGTIECGHTASYYYFG
FT                   KDPALCFDGAVPFGLNTRQMNAWMRHGDGLKLTRELFQKYNVVNFPCGYTGTQMGGWFR
FT                   NEIKSVDDLKGLKFRASAFAGAVLSRLGVVPQQIAGGDIYPALEKGTIDAAEWIGPYDD
FT                   EKLGFHKVAKNYYFPGWWEGTLQVSLYVNQDVYNQLPKHYQAALAQATAAATNDMIAKY
FT                   DAENPAALRRLVAEGAQLKAFPKSVMEACYTQAQAVYKEFSEKDPMFKRVYDSMVAFRD
FT                   NEIPWFRVAEGSYDGFMATVARGK"
FT   misc_feature    195993..196073
FT                   /note="Signal peptide predicted for BB2136 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 27 and 28"
FT   misc_feature    196101..196967
FT                   /note="HMMPfam hit to PF03480, DE Bacterial extracellular
FT                   solute-binding protein, family 7, score 1.3e-73"
FT   CDS             197299..197928
FT                   /transl_table=11
FT                   /locus_tag="BB2137"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1488"
FT                   /db_xref="InterPro:IPR007387"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKH0"
FT                   /protein_id="CAE32633.1"
FT                   /translation="MKALLALSRGIDALNLRVGRAVTWVTLLVVLVSAGNAVVRKVFHS
FT                   SSNAWLELQWYMFGAMFLLTAGYTLLKNEHVRVDILSSRLPRHKQIWIEIFGVVFFLLP
FT                   ACILIMVLSWPVFMDSYLSGEQSSNSGGLIRWPVKLLIPVGFALLVLAGLSHLIKCIGF
FT                   LRGQCPDPTAREGSKSAEELLAEEIAREALEREASVQEQRNNHEGR"
FT   misc_feature    join(197359..197415,197458..197511,197569..197637,
FT                   197695..197763)
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB2137 by TMHMM2.0 at aa 21-39, 54-71, 91-113 and 133-155"
FT   CDS             197931..199598
FT                   /transl_table=11
FT                   /locus_tag="BB2138"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1489"
FT                   /db_xref="GOA:Q7WKG9"
FT                   /db_xref="InterPro:IPR004681"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKG9"
FT                   /protein_id="CAE32634.1"
FT                   /translation="MEFLIANLAPIMFATLVLFLLLGFPVAFALAANGILYGLVGIELD
FT                   LLSPALFQALPQRVFGIISNDTLLAVPFFTLMGLVLERSGMAEDLLETIGQVFGPLRGG
FT                   LAIAVVFVGAMLAATTGVVSASVISMGLISLPIMLRYGYDRRLASGVIAASGTLSQIIP
FT                   PSLVLIILADQLGRSIGDMYRAAMVPGFVLAGLYIAYVVVVSLVKPSAAPALPEEARRF
FT                   REPNGSRGGRSLLVLMLISSLSAYVLGQWLENDTAPVDEQVVVSLLLWGLTAFVIAIAN
FT                   KVFRLKMLSALAERVTFVMIPPLFLIFLVLGTIFIGVATPTEGGAMGAVGAIIMALIRR
FT                   RLTLELLKQAMDTTTKLSCFVVFILVGSTVFGLTFRGVNGDLWVEHLLIGLPGGEWGFL
FT                   IVVSVLTFVLAFFLDFFELAFIIVPLLGPVADKMGIDLIWFGIILAVNMQTSFMHPPFG
FT                   FALFYLRSVAPKDAYKDKITGKVIQPVTTGQIYWGSVPFIVIQLFMVAAVMLFPGMVMH
FT                   YKGGQSTVDPASVKIEIESNYGTNIYGDESSDPGAAFK"
FT   misc_feature    197931..198023
FT                   /note="Signal peptide predicted for BB2138 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.703 between residues 31 and 32"
FT   misc_feature    join(197967..198035,198105..198173,198210..198278,
FT                   198291..198359,198378..198446,198474..198542,
FT                   198618..198686,198714..198782,198816..198884,
FT                   198894..198962,198999..199067,199110..199169,
FT                   199188..199256,199284..199337,199398..199466)
FT                   /note="15 probable transmembrane helices predicted for
FT                   BB2138 by TMHMM2.0 at aa 13-35, 59-81, 94-116, 121-143,
FT                   150-172, 182-204, 230-252, 262-284, 296-318, 322-344,
FT                   357-379, 394-413, 420-442, 452-469 and 490-512"
FT   CDS             199613..200269
FT                   /transl_table=11
FT                   /gene="trpF"
FT                   /locus_tag="BB2139"
FT                   /product="N-(5'-phosphoribosyl)anthranilate isomerase"
FT                   /EC_number="5.3.1.24"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1490"
FT                   /db_xref="GOA:Q7WKG8"
FT                   /db_xref="HSSP:1DL3"
FT                   /db_xref="InterPro:IPR001240"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKG8"
FT                   /protein_id="CAE32635.1"
FT                   /translation="MRTRVKICGLTREQDIASAVQAGADAIGFVFYPASKRHVDPVRAA
FT                   QLRREVPAFVDVVALFVNPRPDEVQAVLDHVAPDLLQFHGDETPQDCGRYGRRYLRAFR
FT                   AGAPGLDSAAGLAAACRQYADAAGWLFDSYSAGYGGSGQGFDHGLLAGVQADPASRAIV
FT                   LAGGLHPGNVADAVRAVRPWALDVSSGVEDAPGVKSADKIRQLMAAIKSVDQVAR"
FT   misc_feature    199625..200239
FT                   /note="HMMPfam hit to PF00697, DE
FT                   N-(5'phosphoribosyl)anthranilate (PRA) isomerase, score
FT                   5.7e-52"
FT   tRNA            200301..200377
FT                   /note="tRNA Val anticodon GAC, Cove score 88.50"
FT   CDS             complement(200570..200848)
FT                   /transl_table=11
FT                   /locus_tag="BB2140"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKG7"
FT                   /protein_id="CAE32636.1"
FT                   /translation="MKKPDPEKIDRDNPEWTDAEFRRAKPAAEVLPESVHAMLGIRRRG
FT                   PQKTPTKQVVTIRLSPDVVEAFKASGTGWQTRVDAALRDWLKTHQPG"
FT   CDS             complement(200835..201101)
FT                   /transl_table=11
FT                   /locus_tag="BB2141"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR007460"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKG6"
FT                   /protein_id="CAE32637.1"
FT                   /translation="MDITYDPAKNDKNIADRGLSFELVCGFEWASALVVEDTRQVYAET
FT                   RYQALGKIDGRLHMVVFTVRGESLRIISLRKANAREVARYEKA"
FT   CDS             complement(201332..202873)
FT                   /transl_table=11
FT                   /locus_tag="BB2142"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR015995"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKG5"
FT                   /protein_id="CAE32638.1"
FT                   /translation="MGRPRRMNPFTMPAMQKTRIAVLHFSHETVTFLERDTELDDFVFD
FT                   GSPCRDEVLLGYDAKGYLGGFVQCAREYTEVELVGIESPLFPKTGIGSGWVTHEAYEHF
FT                   LGIMLDDLAQRGPFDGVYMALHGAMAVRGVERPEADIARRVRQVVGEAAILAATFDPHG
FT                   NEDEQFLQAADLAFCVKYFPHYDMHLQGERAARTMVRAIRGEYRPATMTVKVPILTPTV
FT                   LQWTGGNSPWLQLVHRALTWEAREPDAYVNVFFGFPWADVPDVGMTIQTLTNGKPELAQ
FT                   RIARDMAQAAWRARHDLLNAARIEPIERGVASARQETANGNAPVVLADYSDRSGAATWT
FT                   LQELVRTGARRTLIATVADYELVSRLKQRGARAGDAFDEQVGGRVDDSAGEPVRIQGRI
FT                   LGHGQSQDGTNSRSDWYTVAFGDGNVLVVSAYLMQITEREMLEQMGMTLADFDIFVIKS
FT                   RAHFRRGFDDSGFARTIILVEPPHPFLGTIHLDALPYRNVKVENYFPYGEPGFNP"
FT   misc_feature    complement(202667..202714)
FT                   /note="PS00225 Crystallins beta and gamma 'Greek key' motif
FT                   signature."
FT   CDS             complement(202935..203813)
FT                   /transl_table=11
FT                   /locus_tag="BB2143"
FT                   /product="putative exported protein"
FT                   /db_xref="GOA:Q7WKG4"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKG4"
FT                   /protein_id="CAE32639.1"
FT                   /translation="MIIPSAAGGSADIFTRITMTHLGKALNANIVIENKPGAAGSIGMA
FT                   SIKRARPDGSTFGYGNINTLTVNPALFNKLPYDADADFTPVGAMFSVANVLVVPGNSPY
FT                   QNLGELIAAAKKAPGKLSYAAAGIGSSGHMGGELLKSMAGIDVLFVPYNGDPASLQDLT
FT                   GGRIDYTVTNISVAMPLVESGKLKALAITSRERDNAHPDIPTFSESGLPGFENISWGGL
FT                   ILPKGVPEPIVQKISAALKTVMQSDALRRDLGAAGGNAGTVFGDDFRRFIDTEQQKWAK
FT                   VIVDAGIEKQN"
FT   misc_feature    complement(202950..203774)
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 4.9e-85"
FT   misc_feature    complement(203604..203813)
FT                   /note="PS00430 TonB-dependent receptor proteins signature
FT                   1."
FT   CDS             204210..204842
FT                   /transl_table=11
FT                   /locus_tag="BB2144"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR013559"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKG3"
FT                   /protein_id="CAE32640.1"
FT                   /translation="MAKRQGSKENQALVEQVMQIAAGLGETLAPFTEVVVHDLRTPRHA
FT                   ILAIHNNLSGRTVGDPATELGLARIADNNYPQIIANYPNKFADGRRSKSTSIGIKDSEG
FT                   RYVAALCLNVDVTLFKGLASILEKFSSVEGDTVRESLDPASADAIRARIDQFALDLATT
FT                   PQALGAEHRRALMQQLRDEGYLDLRRAKETVAEHLGVSRATVYKAIK"
FT   misc_feature    204774..204836
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1772.000, SD 5.22 at aa 189-210, sequence
FT                   RAKETVAEHLGVSRATVYKAIK"
FT   CDS             204953..205663
FT                   /transl_table=11
FT                   /gene="aqpZ"
FT                   /gene_synonym="bniP"
FT                   /locus_tag="BB2145"
FT                   /product="aquaporin Z"
FT                   /db_xref="GOA:Q7WKG2"
FT                   /db_xref="InterPro:IPR000425"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKG2"
FT                   /protein_id="CAE32641.1"
FT                   /translation="MQPLFKRCGAEFFGTFWLVLGGCGSAVLAAGVPQVGIGYAGVALA
FT                   FGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLAS
FT                   IAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG
FT                   FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVG
FT                   ALAYRLVGTPSAQR"
FT   misc_feature    204953..205039
FT                   /note="Signal peptide predicted for BB2145 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.883) with cleavage site
FT                   probability 0.833 between residues 29 and 30"
FT   misc_feature    204953..205630
FT                   /note="HMMPfam hit to PF00230, DE Major intrinsic protein,
FT                   score 1.3e-52"
FT   misc_feature    204989..205021
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    join(204989..205048,205058..205126,205214..205282,
FT                   205349..205417,205436..205504,205574..205642)
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB2145 by TMHMM2.0 at aa 13-32, 36-58, 88-110, 133-155,
FT                   162-184 and 208-230"
FT   misc_feature    205142..205168
FT                   /note="PS00221 MIP family signature."
FT   CDS             complement(205702..205974)
FT                   /transl_table=11
FT                   /locus_tag="BB2146"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKG1"
FT                   /protein_id="CAE32642.1"
FT                   /translation="MQRDFDLVVAILRTIADADLPALAIDQIETAVVDENGNGVAVEWV
FT                   AHHLDIMADAGLVKAVDGGAWRLTWQGYDALEQDDEDEDDDALPM"
FT   CDS             206134..207558
FT                   /transl_table=11
FT                   /gene="hemN"
FT                   /locus_tag="BB2147"
FT                   /product="oxygen-independent coproporphyrinogen III
FT                   oxidase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1494"
FT                   /db_xref="GOA:Q7WKG0"
FT                   /db_xref="HSSP:1OLT"
FT                   /db_xref="InterPro:IPR007197"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKG0"
FT                   /protein_id="CAE32643.1"
FT                   /translation="MSDTLIPERFADAPRSRPVFPDSLLSRLDKSGPRYTSYPTADRYH
FT                   DGFGARDYHQALAERTASRRGEPMSLYVHVPFCDSVCYYCACNKVVTRHHERAAPYLDA
FT                   LGQELALQVEALGSGEPVSHLHLGGGTPTFLSDAELTRLMAMLRGAFTLTPDAEVSIEV
FT                   DPRTADRGRLAHLRELGFNRLSFGVQDFDPRVQQAVHRVQPFEDVRQLMLAARELGFGS
FT                   INVDLIYGLPHQTLASFARTVEQVGELRPDRIALYAYAHLPQRFAPQRRILAADLPDAS
FT                   TRVGLLGDAIAGFLELGYVYIGMDHFALPDDALAVARREGRLHRNFQGYTAQPDGDLIA
FT                   LGVSAIGKVGNVYSQNVKTLDAYYGALAQARLPIERGLRLSADDELRRRLIMAVMCRGR
FT                   LALAELGGSAGAPASAAFGPELARLRELAGLGLVTLDAEVIQVTELGWYFVRAVAMTFD
FT                   RYLREAAPAASYSRIV"
FT   misc_feature    206479..207240
FT                   /note="HMMPfam hit to PF02473, , score 1.1e-140"
FT   CDS             complement(207555..207947)
FT                   /transl_table=11
FT                   /locus_tag="BB2148"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1495"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKF9"
FT                   /protein_id="CAE32644.1"
FT                   /translation="MAKHHQASGTLCVQWLCPGPAQQRALLELALRCLRDDRLEIRRAL
FT                   RQRDNATVRERLHRAKGAICTLWPDPETLARLEAVHRQLPRRGSQLWSQAAALESRLLQ
FT                   LEQAMLASLDALGGDPIAQEQQPAPP"
FT   CDS             complement(207953..208729)
FT                   /transl_table=11
FT                   /locus_tag="BB2149"
FT                   /product="probable two-component response regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1496"
FT                   /db_xref="GOA:Q7WKF8"
FT                   /db_xref="InterPro:IPR000792"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKF8"
FT                   /protein_id="CAE32645.1"
FT                   /translation="MPHRLSHAAPVLAGQACAAHPPATYPSSAQPAVASARRYMLLSRP
FT                   SRRLRVAILDDHPAVAVGLSAYLGEHGDFEVALTETNAVALAHQLKRHPCDAAVIDFFM
FT                   PAQSWDGVDFIRRLRRLCPDMAVITISAGKAHETEYAAFRAGANGFLPKGAPLSLLAEL
FT                   IRTTVVSRRAFFSARTGQLRATIPDPPDSRLTNAEREILRQIAQGFSVTQISGRLLRSK
FT                   KTVSTHKRRAMKKLGLADDLALALYLSEKFEQNVYG"
FT   misc_feature    complement(207962..208159)
FT                   /note="HMMPfam hit to PF00196, DE Bacterial regulatory
FT                   proteins, luxR family, score 1.3e-15"
FT   misc_feature    complement(208025..208108)
FT                   /note="PS00622 Bacterial regulatory proteins, luxR family
FT                   signature."
FT   misc_feature    complement(208217..208585)
FT                   /note="HMMPfam hit to PF00072, DE Response regulator
FT                   receiver domain, score 1.2e-14"
FT   CDS             209117..211066
FT                   /transl_table=11
FT                   /gene="thrS"
FT                   /locus_tag="BB2150"
FT                   /product="threonyl-tRNA synthetase"
FT                   /EC_number="6.1.1.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1497"
FT                   /db_xref="GOA:Q7WKF7"
FT                   /db_xref="HSSP:1EVL"
FT                   /db_xref="InterPro:IPR004154"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKF7"
FT                   /protein_id="CAE32646.1"
FT                   /translation="MVQITLPDGSQRQYPGPVTVAEVAQSIGAGLAKAALAGRVAFDGA
FT                   EPRLVDTSFRIDNDAQLAIVTAKDADGLDLIRHSTAHLLAYAVKSLFPDAQVTIGPVID
FT                   NGFYYDFSYKRPFTPEDLQAIEKKMAELARKDEVVTREEWSRDEAVAYFKGIGEVYKAE
FT                   IIASIPSNETLSLYREGDFIDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEMLQRI
FT                   YGTAWASKDDQDAYLHMLEEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWALWQQV
FT                   EQYMRKVYQDNGYQEVKAPQILDLTLWKKTGHWDNYRENMFTTESENRVYGLKPMNCPG
FT                   HVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQD
FT                   ECAAFTALLQKVYKDFGFTEVLYKVATRPEKRIGSDEIWDKAETALMESLRRTGCEFEI
FT                   SPGEGAFYGPKVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRA
FT                   ILGSLERFIGMLIENHAGAMPPWLAPLQAVVCCISEHSAEYAAQITQSLKKQGFRVQAD
FT                   LRGEKITRKIREHSLQKIPYLLVVGDKEMQNGTVAVRGLGGLDLGVIALDDFIARLAED
FT                   ISTRRNVTQLASAA"
FT   misc_feature    209117..209314
FT                   /note="HMMPfam hit to PF02824, DE TGS domain, score
FT                   3.6e-06"
FT   misc_feature    209912..210373
FT                   /note="HMMPfam hit to PF00587, DE tRNA synthetase class II
FT                   core domain (G, H, P, S and T), score 1.5e-55"
FT   misc_feature    210212..210277
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1."
FT   misc_feature    210671..210700
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT   misc_feature    210731..211021
FT                   /note="HMMPfam hit to PF03129, DE Anticodon binding domain,
FT                   score 1.8e-28"
FT   CDS             211138..211632
FT                   /transl_table=11
FT                   /gene="infC"
FT                   /gene_synonym="fit"
FT                   /locus_tag="BB2151"
FT                   /product="translation initiation factor IF-3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1498"
FT                   /db_xref="GOA:Q7WKF6"
FT                   /db_xref="InterPro:IPR019814"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKF6"
FT                   /protein_id="CAE32647.1"
FT                   /translation="MRLIGLDGEQLGIVKIADAFRLSEQSDVDLVEIAPNADPPVCRLM
FT                   DYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPATDEGDYQVKLRNLRRFLEEGDKAKVT
FT                   LRFRGREMAHQELGMRVLERVRDDLIELAQVEAMPKLEGRQMVMVLAPRKKAVGKPDAA
FT                   G"
FT   misc_feature    211141..211599
FT                   /note="HMMPfam hit to PF00707, DE Translation initiation
FT                   factor IF-3, score 9.7e-89"
FT   misc_feature    211264..211305
FT                   /note="PS00938 Initiation factor 3 signature."
FT   CDS             211769..212725
FT                   /transl_table=11
FT                   /gene="gshB"
FT                   /gene_synonym="gsh-II"
FT                   /locus_tag="BB2152"
FT                   /product="glutathione synthetase"
FT                   /EC_number="6.3.2.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1499"
FT                   /db_xref="GOA:Q7WKF5"
FT                   /db_xref="InterPro:IPR013817"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKF5"
FT                   /protein_id="CAE32648.1"
FT                   /translation="MHVLFIIDPLPLLKAYKDSSVAMMQALQARGHTLSVALQGDLYID
FT                   AGEVRTRFAPIALRDGADLHGHDWWRETGAADEAPLARFDAVVMRKDPPFDMEYVYSTH
FT                   LLEYAQQQGARVFNSGAAIRNHPEKLAITEFPDLTTPTLVTRDMGRIRAFHAAQGDVIV
FT                   KPLDGMGGTGIFRLQRSEPNLNAILETLTDNGTRTIMAQRYIPEIVKGDKRILLIGGEP
FT                   VPYSLARIPLAGETRGNLAAGGRGVAQPLSERDLHLARTVADRLAGRGLLLVGLDVIGD
FT                   YITEVNVTSPTCFVEITEQTGFNVPEMFAVALESAAG"
FT   misc_feature    211769..212140
FT                   /note="HMMPfam hit to PF02951, DE Prokaryotic glutathione
FT                   synthetase, N-terminal domain, score 5.1e-27"
FT   misc_feature    212150..212695
FT                   /note="HMMPfam hit to PF02955, DE Prokaryotic glutathione
FT                   synthetase, ATP-binding domain, score 4.1e-36"
FT   CDS             212736..213134
FT                   /transl_table=11
FT                   /locus_tag="BB2153"
FT                   /product="putative IIa component of sugar transport PTS
FT                   system"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1500"
FT                   /db_xref="GOA:Q7WKF4"
FT                   /db_xref="InterPro:IPR004701"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKF4"
FT                   /protein_id="CAE32649.1"
FT                   /translation="MTGIVIVVHAPLGSAMRESVAHVLGDATEALAVHDIHPEDLPDDA
FT                   APRVLADILRVDQGQGVLVLTDLIGATPANIAKRAVADAQAQGIQCCVLAGLNTPMLLR
FT                   ALTYRNLSLAETREKALAGGVQGCLRVD"
FT   misc_feature    212760..213047
FT                   /note="HMMPfam hit to PF03610, DE PTS system fructose IIA
FT                   component, score 1.3e-11"
FT   CDS             213250..213519
FT                   /transl_table=11
FT                   /gene="ptsH"
FT                   /gene_synonym="phbH"
FT                   /locus_tag="BB2154"
FT                   /product="phosphocarrier protein HPr"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1501"
FT                   /db_xref="GOA:Q7WKF3"
FT                   /db_xref="HSSP:1MU4"
FT                   /db_xref="InterPro:IPR002114"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKF3"
FT                   /protein_id="CAE32650.1"
FT                   /translation="MPSSDIVISNKLGLHARAAAKLTQLASRFSSEIFISRGAQRVNAK
FT                   SIMGVMMLAAGLGVTVKLEASGSDADQALSEIQTLFDNKFGEQE"
FT   misc_feature    213250..213501
FT                   /note="HMMPfam hit to PF00381, DE PTS HPr component
FT                   phosphorylation site, score 7.7e-31"
FT   misc_feature    213286..213309
FT                   /note="PS00369 PTS HPR component histidine phosphorylation
FT                   site signature."
FT   misc_feature    213364..213411
FT                   /note="PS00589 PTS HPR component serine phosphorylation
FT                   site signature."
FT   CDS             213641..215335
FT                   /transl_table=11
FT                   /gene="ptsI"
FT                   /locus_tag="BB2155"
FT                   /product="phosphoenolpyruvate-protein phosphotransferase"
FT                   /EC_number="2.7.3.9"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1502"
FT                   /db_xref="GOA:Q7WKF2"
FT                   /db_xref="HSSP:1EZC"
FT                   /db_xref="InterPro:IPR018274"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKF2"
FT                   /protein_id="CAE32651.1"
FT                   /translation="MARGYAIGRAVVMGAAALEVAHYRIAPEDVAAESQRLTEALAKAQ
FT                   ADLLQMADTLPEDAPRELGAMLNVHRLLLGDPLLAEQALALIAERHYNAEWALTAQGQI
FT                   LGQQFEAMEDEYLRERGGDVRQVIERALHVLAGTSAMLPDGAQLDGDDPLVVVAHDISP
FT                   ADMLRLRGGRFAAFVTDLGGPTSHTAIVARSMGVPAVVALGNVRELVRDGDMLIVDGAD
FT                   GVVVLNPSARILAEYQARQRVYADERAELALLRDEPAVTLDGIDIVLHANIELPEEASL
FT                   SLACGAHGIGLFRSEFLFMGRPDLPGEEEQYEAYASVVKVMAGRPVTIRTLDIGADKTL
FT                   DDEATVATNPALGQRAIRYCLARPEMFATQLRAILRASAHGPVRVLIPMIAHMHEVHAT
FT                   YAALESARRELDARGQPYAARVEVGAMVEIPAIAIAIEPFVQALDFLSIGTNDLIQYTL
FT                   AIDRGDHDVAGLYDPLHPAVLRLVANTINAGERAGKPVAVCGEMAGDARLTRLLLGLGL
FT                   TEFSMHPQQLLDVKREVRRAHSNALRVKVAAALNRALPIDPDTLDAL"
FT   misc_feature    214025..214309
FT                   /note="HMMPfam hit to PF00391, DE PEP-utilizing enzyme,
FT                   mobile domain, score 3.1e-24"
FT   misc_feature    214184..214219
FT                   /note="PS00370 PEP-utilizing enzymes phosphorylation site
FT                   signature."
FT   misc_feature    214382..215263
FT                   /note="HMMPfam hit to PF02896, DE PEP-utilizing enzyme, TIM
FT                   barrel domain, score 6e-127"
FT   misc_feature    214970..215026
FT                   /note="PS00742 PEP-utilizing enzymes signature 2."
FT   CDS             complement(215500..215724)
FT                   /transl_table=11
FT                   /locus_tag="BB2156"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1503"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKF1"
FT                   /protein_id="CAE32652.1"
FT                   /translation="MTTSSRGARRPGASARAWRKPALLAPMRRNHRMLAPALVHGMQDF
FT                   ADCVEKPGGAGLDSPPPAAPHGYQGGAPG"
FT   CDS             complement(215721..216146)
FT                   /transl_table=11
FT                   /gene="osmC"
FT                   /locus_tag="BB2157"
FT                   /product="osmotically inducible protein C"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1504"
FT                   /db_xref="GOA:Q7WKF0"
FT                   /db_xref="HSSP:1QWI"
FT                   /db_xref="InterPro:IPR019904"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKF0"
FT                   /protein_id="CAE32653.1"
FT                   /translation="MKKTASAVWKGDLKSGQGTISSQSGALKNQPYGFNTRFADQPGTN
FT                   PEELLGAAHAGCFSMALSNILGEAGLKADSIETTAEVTLDKTDDGFTITAVHLTVNAVV
FT                   PGATKDSFADAAAKAKAGCPVSKVLNARISMDATLKG"
FT   misc_feature    complement(215727..216122)
FT                   /note="HMMPfam hit to PF02566, DE OsmC-like protein, score
FT                   1.6e-32"
FT   CDS             216321..217271
FT                   /transl_table=11
FT                   /locus_tag="BB2158"
FT                   /product="putative ornithine cyclodeaminase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1505"
FT                   /db_xref="GOA:Q7WKE9"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE9"
FT                   /protein_id="CAE32654.1"
FT                   /translation="MLQIDAEHTRRALRFTAVIDALRDAFRGGVHVPPRHVHAIESGGA
FT                   QGTTLIMPAWNDAGYFGVKVINIFPANTHQGLPGLHATYTLYSARTGVPLAQVDGDVVT
FT                   AYRTAGAAALGASYLARADARVLLILGSGRIAGLVAPAMRAVRPIERVLVWNVRPAGAQ
FT                   RLAGELREQGFDAQAVTDLQAAVGQADIVSCATLSTEPLVRGEWLRPGMHLDLIGSFTP
FT                   EMKETDPQCFAGTSVYVDTDEAPTKAGDLLEAFAAGTLARTQIRGTLADLVAGRAAGRR
FT                   DAAEITVFKAVGSALEDLTLAALVYEARQGDVQAQ"
FT   misc_feature    216321..217256
FT                   /note="HMMPfam hit to PF02423, DE Ornithine
FT                   cyclodeaminase/mu-crystallin family, score 6.7e-57"
FT   CDS             217313..218473
FT                   /transl_table=11
FT                   /locus_tag="BB2159"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1506"
FT                   /db_xref="InterPro:IPR001828"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE8"
FT                   /protein_id="CAE32655.1"
FT                   /translation="MSTLLARLAVLATALVPAFAAQAEVVIGVDVSTTGPAAAIGIQTN
FT                   NAIRLWPATLGGEPARYVVLDDGTDVSRAVKNMRKLTSEDKVDAIVGPNTTAAALAGLD
FT                   VLAETRTPMIALAASAVIVEPMSDPKRAWAFKMPQNDSLMASVLVQDMKKKGVKTVAFI
FT                   GFADSYGDSWWKEFSQAAGDDLKIVAQERFQRTDASVVGQVLKVIAAKPDAVLIAGAGT
FT                   PSALPQKTLLERGYAGKVYQTHGIGTLEFLQVGGRDVEGTLFPTGPGVVARELPDSNPV
FT                   KKVAVEFADKYEAQYGANTLTQFAGDAYGAWILLDSAVARALKTGAKPGTPEFRAALRD
FT                   ALENTRDLTVPNGVLNISAENHQGFDERARVMGVVRNGRFSYAGQP"
FT   misc_feature    217313..217381
FT                   /note="Signal peptide predicted for BB2159 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.822 between residues 23 and 24"
FT   CDS             218634..219554
FT                   /transl_table=11
FT                   /locus_tag="BB2160"
FT                   /product="putative extracellular solute-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1507"
FT                   /db_xref="GOA:Q7WKE7"
FT                   /db_xref="InterPro:IPR001638"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE7"
FT                   /protein_id="CAE32656.1"
FT                   /translation="MLMRRFNFVKWGLLMVGAGLLAACSDSDSSDPGAAQQPAAQSAST
FT                   LDAAKAAGKIRIGYANEAPYAYMDSKEARVTGESVEIARVVLKRMGIDEVEGVLTEFGS
FT                   LIPGLQAKRFDIIAAGMYVTPERCQQVAFSDPTYGVGQAFLVQKGNPKNLHSYADVAKN
FT                   GEAKLGVVVGAIEAEYATKQEIPAGQVVVFPDAVSALSGIEAGRADAYAATALTVNDLM
FT                   HKTSAGDKLEKADPFTDPTVDGKSVRGYGAFAFRKDDQAFADAFNAELKKFVGSDEHRK
FT                   LVEPFGFTAGELPGDVTAAKLCAAQ"
FT   misc_feature    218634..218720
FT                   /note="Signal peptide predicted for BB2160 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.996) with cleavage site
FT                   probability 0.225 between residues 29 and 30"
FT   misc_feature    218673..218705
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    218796..219503
FT                   /note="HMMPfam hit to PF00497, DE Bacterial extracellular
FT                   solute-binding proteins, family 3, score 4.5e-53"
FT   CDS             219567..220208
FT                   /transl_table=11
FT                   /locus_tag="BB2161"
FT                   /product="putative inner membrane component of
FT                   binding-protein-dependent transport system"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1508"
FT                   /db_xref="GOA:Q7WKE6"
FT                   /db_xref="InterPro:IPR010065"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE6"
FT                   /protein_id="CAE32657.1"
FT                   /translation="MDNTWSLLPPLLDGLAVTLRIAAGAAALAIPLALAAGLARLSASP
FT                   WLRAPAAVYVEVFRGTSALVQLFWFYFVLPMFGMKLPALLVGIVVLGANAGAYGAEVVR
FT                   GAILAVPAGQREAAVALNLTRARTIWRIILPQAVPAMLPPTGNLLIELLKNTALVSLIT
FT                   ITDLTFRGQLLRSETLRTTEIFTLVLLLYFAVALVITGGIRMLERRFKVR"
FT   misc_feature    219567..219671
FT                   /note="Signal peptide predicted for BB2161 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.871) with cleavage site
FT                   probability 0.763 between residues 35 and 36"
FT   misc_feature    join(219609..219677,219765..219833,220116..220184)
FT                   /note="3 probable transmembrane helices predicted for
FT                   BB2161 by TMHMM2.0 at aa 15-37, 67-89 and 184-206"
FT   misc_feature    219882..220094
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 2.3e-12"
FT   CDS             220205..220876
FT                   /transl_table=11
FT                   /locus_tag="BB2162"
FT                   /product="putative inner membrane component of
FT                   binding-protein-dependent transport system"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1509"
FT                   /db_xref="GOA:Q7WKE5"
FT                   /db_xref="InterPro:IPR010065"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE5"
FT                   /protein_id="CAE32658.1"
FT                   /translation="MSPIFDWGFALEILPMLGSALVITVQATLLGMLVAVTLGLALALL
FT                   RRSPFWPVSALTALVIEFVRSTPLLVQMYFLFYVLPVTGWQMSPLTTGILALGLHYAAY
FT                   CAEVYRAGIEAVPRGQHEAATALNLSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTP
FT                   LLSAITVVELLQQSKIIGSTTFRYTEPLTLVGVLFLLLSLVAAWGVRRLEARLKLYGGK
FT                   R"
FT   misc_feature    join(220271..220339,220352..220420,220448..220516,
FT                   220607..220675,220763..220831)
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB2162 by TMHMM2.0 at aa 23-45, 50-72, 82-104, 135-157 and
FT                   187-209"
FT   misc_feature    220538..220771
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 1.9e-15"
FT   CDS             220873..221643
FT                   /transl_table=11
FT                   /locus_tag="BB2163"
FT                   /product="putative ATP-binding component of ABC
FT                   transporter"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1510"
FT                   /db_xref="GOA:Q7WKE4"
FT                   /db_xref="HSSP:1B0U"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE4"
FT                   /protein_id="CAE32659.1"
FT                   /translation="MSASIRLAKLCKRYGDLDVLRGIDLEIPAGQTVSVIGPSGSGKST
FT                   LLRLLMTLDRPTSGAIEIDGESMWHDAQGREMGPNSAHVRRVRGKIGMVFQHFNLFPHK
FT                   TALGNVIEAPLYVLGLSRDEAVARGREYLDMVGLGDKLDAYPAQLSGGQKQRVGIARAL
FT                   AMCPEVMLFDEVTSALDPELVGGILQILRDLAARRTMTMIIVTHQMKFAERSSDRTLFF
FT                   DEGNIVEDAESAQLFAAPREPRTQQFLQSVIEAA"
FT   misc_feature    220960..221547
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   5.8e-65"
FT   misc_feature    220981..221004
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    221317..221361
FT                   /note="PS00211 ABC transporters family signature."
FT   CDS             complement(221640..222089)
FT                   /transl_table=11
FT                   /gene="dut"
FT                   /gene_synonym="dnaS"
FT                   /locus_tag="BB2164"
FT                   /product="deoxyuridine 5'-triphosphate nucleotidohydrolase"
FT                   /EC_number="3.6.1.23"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2578"
FT                   /db_xref="GOA:Q7WKE3"
FT                   /db_xref="InterPro:IPR008181"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKE3"
FT                   /protein_id="CAE32660.1"
FT                   /translation="MKSVDLKILDARMREYLPAYATPGSAGLDLRACTEASLVIEPGQT
FT                   VLVPTGLAIHIGDPRYAAMILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSTWNRGTQ
FT                   PFTLDPMERLAQLVIVPVQQVAFNVVEDFDASERGAGGFGSTGRA"
FT   misc_feature    complement(221649..222050)
FT                   /note="HMMPfam hit to PF00692, DE dUTPase, score 1.1e-44"
FT   CDS             complement(222183..222731)
FT                   /transl_table=11
FT                   /locus_tag="BB2165"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2584A"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE2"
FT                   /protein_id="CAE32661.1"
FT                   /translation="MTAPARPSSPTRRSRSMAIDGEPKNGDFARYIEELSRTGGAPGQV
FT                   LPAQRAPAAAAQSGVAGKLSELTWGKRPERTAPAPLPASGAEQAAPPPTLAASASTRRM
FT                   ALFLTIGALIAGWNALSFFVAALTSGRLDIDTMMPALFLAIAAWMLFKGARNLRAGRRG
FT                   QLPKLPPLSTLPKGPNHRG"
FT   misc_feature    complement(join(222270..222323,222351..222419))
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB2165 by TMHMM2.0 at aa 105-127 and 137-154"
FT   CDS             complement(222728..223366)
FT                   /transl_table=11
FT                   /locus_tag="BB2166"
FT                   /product="DedA-family integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2585"
FT                   /db_xref="InterPro:IPR015414"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE1"
FT                   /protein_id="CAE32662.1"
FT                   /translation="MQAYIDRIGDFIQANQDWAGPITFLLTFGESMVLVGLLIPATALM
FT                   LLTGGLIGAGTLSPWGVLAWGIAGAIAGDAVSYALGRWLGPGVMRRWPLNTQRSAVARA
FT                   RLFFYRYGFASVLIGRFLGPIRSTIPTVAGIMGMHHLRFQLANVLSAVAWLPLMLAPGY
FT                   ITARGLGAMDNAPHIGLAAGMGASVLIGCWLLVAVMRKRRQPARANRRP"
FT   misc_feature    complement(join(222776..222844,222872..222940,
FT                   223124..223192,223202..223270))
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB2166 by TMHMM2.0 at aa 33-55, 59-81, 143-165 and 175-197"
FT   misc_feature    complement(222830..223306)
FT                   /note="HMMPfam hit to PF00597, DE DedA family, score 1e-16"
FT   CDS             223439..224509
FT                   /transl_table=11
FT                   /locus_tag="BB2167"
FT                   /product="integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2586"
FT                   /db_xref="InterPro:IPR007404"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKE0"
FT                   /protein_id="CAE32663.1"
FT                   /translation="MDVSGIEQRRNYMDSVTQVVLGAAIQGSMLGRSQGRKALLYGGLL
FT                   GTLPDLDVLMRYPDPVSLMTYHRGFSHSILVLTALAAVMAWLIRRRWPDAPYSGRRLFA
FT                   TLLLVLVTHPVLDAFTVYGTQLFWPFPLVPESWSAVFIIDPVYTVPMLAAVLVAAWRGM
FT                   TPATCRGLAATVLFGAAYLLVALTGRFQAETSVTAALRERGEQVEAVLATPMPFNTLLW
FT                   RVIAKTGDGAYYEAVSGRFDRQPPEMARLPLHTDVGQALAGVPLHERLRWFTNDWLRYD
FT                   ALGDALVVTDLRMGIAGYYTFRFVMAERDGDRWRAVTPRRWPSDRGNWEQMRLTLARIV
FT                   GSQPLPLARWARQAEN"
FT   misc_feature    join(223550..223603,223646..223705,223742..223810,
FT                   223847..223915,223934..224002)
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB2167 by TMHMM2.0 at aa 38-55, 70-89, 102-124, 137-159 and
FT                   166-188"
FT   CDS             complement(224506..224979)
FT                   /transl_table=11
FT                   /locus_tag="BB2168"
FT                   /product="putative AsnC-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1749"
FT                   /db_xref="GOA:Q7WKD9"
FT                   /db_xref="InterPro:IPR019888"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD9"
FT                   /protein_id="CAE32664.1"
FT                   /translation="MQLDAIDHRILGILQRDADISNAVLAERVGLSASACLRRVARLKE
FT                   SGVIRRIVAVLDPACVERPLSAIVTVEFARHGSEYRRTFMEQVALEPAVTQCYMVTGEV
FT                   SCVLIVHMRDMDEYLAFADRLFDQDDNVQAFYTHIVMQTVKDEPVVAVPAAPR"
FT   misc_feature    complement(224590..224901)
FT                   /note="HMMPfam hit to PF01037, DE AsnC family, score
FT                   7.3e-25"
FT   misc_feature    complement(224857..224922)
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1034.000, SD 2.71 at aa 20-41, sequence
FT                   ISNAVLAERVGLSASACLRRVA"
FT   CDS             225141..226079
FT                   /transl_table=11
FT                   /locus_tag="BB2169"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1750"
FT                   /db_xref="GOA:Q7WKD8"
FT                   /db_xref="InterPro:IPR011642"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD8"
FT                   /protein_id="CAE32665.1"
FT                   /translation="MRRSGRLFLTLVKVMLPVMVAVQAAQAWGWIDILGQAFAPAMGLL
FT                   NLPAEAGMVWMTGAFVGIYGAIAALISLAPVLELTGGQFSALCSMLLFAHALPVEQAIV
FT                   RRAGASFWATAALRVVAALGYGAAVSWFCHATGWLDEPVSLQWLQSSALAGEQAGGIWA
FT                   WVRGTAMSLSFTYLIILALLVALDVMERTGITRAITVALTPVLRVSGLDPRVTPVTILG
FT                   VLLGLSYGGALIIEEAEKQQLEARPRFLALAWLSLSHSLIEDTVLLMALGANGWIVLVG
FT                   RLLVTLVVVAILARMLGGGGAARRPLGAPAG"
FT   misc_feature    225141..225212
FT                   /note="Signal peptide predicted for BB2169 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.997) with cleavage site
FT                   probability 0.900 between residues 24 and 25"
FT   misc_feature    join(225159..225227,225294..225362,225486..225554,
FT                   225630..225698,225966..226034)
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB2169 by TMHMM2.0 at aa 7-29, 52-74, 116-138, 164-186 and
FT                   276-298"
FT   CDS             complement(226081..227289)
FT                   /transl_table=11
FT                   /gene="dfp"
FT                   /locus_tag="BB2170"
FT                   /product="DNA/pantothenate metabolism flavoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1751"
FT                   /db_xref="GOA:Q7WKD7"
FT                   /db_xref="HSSP:1E20"
FT                   /db_xref="InterPro:IPR003382"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD7"
FT                   /protein_id="CAE32666.1"
FT                   /translation="MLDLARKRIVLGLTGGIACYKIAELVRRMTEQGAVVDVVMTEAAT
FT                   HFITPVTMQALSGRPVFVDAWDARVDNNMAHIDLTRGADAVLIAPASADFMAKLAHGLA
FT                   DDLLSTLCLARACPLLVAPAMNREMWANPATQRNVAQLRADGITVLGPAAGEQACGETG
FT                   TGRMLEAHELLADLIASFQPKVLAGRHVLLTAGPTSEPVDPVRVLSNRSSGKTGYALAR
FT                   AAHEAGARVTLITGATALAIPRGVTALHVTTARQMHDAVMANANDADIFVAVAAVADWR
FT                   VKNVSEQKLKKTTEGGGAPALEFEPNPDILAEVAKLASGPWCVGFAAETEKLAEHAEAK
FT                   RLRKGIPLLVGNLAHKVMDADTTELVLFDEHGVHPLPAAAKLDAARRLIAEIAARLPAP
FT                   ARP"
FT   misc_feature    complement(226918..227271)
FT                   /note="HMMPfam hit to PF02441, DE Flavoprotein, score
FT                   6.9e-41"
FT   misc_feature    complement(227233..227265)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(227394..227900)
FT                   /transl_table=11
FT                   /gene="lspA"
FT                   /locus_tag="BB2171"
FT                   /product="lipoprotein signal peptidase"
FT                   /EC_number="3.4.23.36"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1752"
FT                   /db_xref="GOA:Q7WKD6"
FT                   /db_xref="InterPro:IPR001872"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD6"
FT                   /protein_id="CAE32667.1"
FT                   /translation="MTQARAAAPRLAPWLAAAALIIVLDQATKLYFDGAFQYGERLNVL
FT                   PFFDFTLLYNRGAAFSFLASEEGWQRWFFTALGVGASIVIVWLLRRTAGQPRFSLALTL
FT                   IMGGALGNVIDRVAYGHVVDFLLFYWRDWHYPAFNLADVAITCGAVLLVVDELLRARKR
FT                   PTVQD"
FT   misc_feature    complement(227406..227867)
FT                   /note="HMMPfam hit to PF01252, DE Signal peptidase (SPase)
FT                   II, score 2.9e-55"
FT   misc_feature    complement(join(227439..227498,227541..227609,
FT                   227634..227687,227829..227882))
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB2171 by TMHMM2.0 at aa 7-24, 72-89, 98-120 and 135-154"
FT   CDS             complement(227903..230764)
FT                   /transl_table=11
FT                   /gene="ileS"
FT                   /gene_synonym="ilvS"
FT                   /locus_tag="BB2172"
FT                   /product="isoleucyl-tRNA synthetase"
FT                   /EC_number="6.1.1.5"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1753"
FT                   /db_xref="GOA:Q7WKD5"
FT                   /db_xref="HSSP:1FFY"
FT                   /db_xref="InterPro:IPR013155"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKD5"
FT                   /protein_id="CAE32668.1"
FT                   /translation="MDYKKSLNLPDTPFPMRGDLAKREPGWVAEWEETQVYQAIRAASR
FT                   GRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ
FT                   IEKKYGKHLPVTEVQSKARAYALEQIDRQRKDFKRLGVLGDWHNPYLTMNFSNEADEIR
FT                   VLGRILEKGYVFRGLKPVNWCFDCGSALAEAEVEYADRVDPAIDVAFPFTDRGALARAF
FT                   GLDEVDAGAIVIWTTTPWTIPSNQALNVHPEIDYALVRVTPTPVHGPLLLLAQERVEPS
FT                   LKAWGLEGEIIATAKGEALEGLRFRHPLAAAAQGYDRTSPIYLGDYVTLDTGTGVVHSA
FT                   PAYGIEDFVSCKAHGLADSDILGPVMGDGKFVDSLPLFGGLSIWDANPRIVEALKLAGS
FT                   LMLVQKLSHSYMHCWRHKTPVIYRATSQWFAGMDVKPRDGGPSLRESALAGIDATAFYP
FT                   AWGRARLHAMIANRPDWTLSRQRQWGVPMAFFVHKETGELHPRTVELLEQVAQRVEKGG
FT                   IEAWQSLDPRELLGDEAELYEKNRDTLDVWFDSGSTHATVLGGKDGVLGGSHGAELAWP
FT                   ADLYLEGSDQHRGWFHSSLLTGCMLYGHPPYKGLLTHGFVVDGQGRKMSKSVGNVIAPQ
FT                   KVSDSLGAEILRLWVASTDYSGELSISDEILKRVVESYRRIRNTLRFLLANVADFDAVG
FT                   QAVPYGELFEIDRYALAMTAQMQAEVQGHYERYDFHPAVSRLQTFCSEDLGAFYLDILK
FT                   DRLYTTAAGSAARRSAQTALLDITQTLLKLMAPILSFTAEEAWKVLAGSALAKQADAPR
FT                   VTIFTEVYHALPPFADGEALTAKWTRLRAIRAEVQRKLEEVRSAGAIGSSLQAEVDLYA
FT                   NAADHDILASLGDDLRFVLIVSRATVHADADDLRIEIAASGHKKCERCWHWRPDVGQDA
FT                   DHPEICGRCVSNLFGAGEPRTRA"
FT   misc_feature    complement(228779..230689)
FT                   /note="HMMPfam hit to PF00133, DE tRNA synthetases class I
FT                   (I, L, M and V), score 6.8e-246"
FT   misc_feature    complement(228968..229000)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    complement(230561..230596)
FT                   /note="PS00178 Aminoacyl-transfer RNA synthetases class-I
FT                   signature."
FT   CDS             complement(230754..231719)
FT                   /transl_table=11
FT                   /gene="ribF"
FT                   /locus_tag="BB2173"
FT                   /product="riboflavin biosynthesis protein"
FT                   /EC_number="2.7.1.26"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1754"
FT                   /db_xref="GOA:Q7WKD4"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD4"
FT                   /protein_id="CAE32669.1"
FT                   /translation="MKPSLRIYRYPPPPSQRTPCALTIGNFDGVHLGHQAILARVRQEA
FT                   RARGLVPAVMTFEPHPREYFATLNRRPELAPTRISGLRDKLQALAAAGIEQVAVERFDA
FT                   RLAEMSANAFIEDLLVAGLQTRWLLVGEDFRYGHKRSGDIDLLREAGLAHGFEVCTLAD
FT                   ITDRQGHRISSSEVRTALAVGDLDRAAQLLGQPFHISGHVIHGRKLGRELGFPTMNLRV
FT                   APRCATRSGIYVVRVLGLQDRPLPAVASLGVRPTVEDRGRVLLEAHLLDESLDAYGKLV
FT                   RVEFLHKLRDEEKFADLPSLTAAIAQDAQNARAYFAVHGL"
FT   misc_feature    complement(230769..231146)
FT                   /note="HMMPfam hit to PF01687, DE Riboflavin kinase / FAD
FT                   synthetase, score 1.3e-44"
FT   CDS             231779..232432
FT                   /transl_table=11
FT                   /gene="purN"
FT                   /locus_tag="BB2174"
FT                   /product="phosphoribosylglycinamide formyltransferase 1"
FT                   /EC_number="2.1.2.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1755"
FT                   /db_xref="GOA:Q7WKD3"
FT                   /db_xref="HSSP:1GAR"
FT                   /db_xref="InterPro:IPR004607"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD3"
FT                   /protein_id="CAE32670.1"
FT                   /translation="MSNPKRRLVILISGRGSNMQALVQACRGQSWPAEVAAVIASRPDA
FT                   AGLDWARQQGIATAALYHKDYPSREAFDAALAREIDRHAPDYVLLAGFMRVLTPGFVNH
FT                   YAGRLVNIHPSLLPAFPGLHTHAQALATGVRAHGCTVHFVTPVLDHGPIIAQGCVPVLA
FT                   GDTPEALAGRVLEVEHQVYPAAARWLAEGRVSLTADQRVEVAGEPQRLFFWPAA"
FT   misc_feature    231794..232336
FT                   /note="HMMPfam hit to PF00551, DE Formyl transferase, score
FT                   3.4e-69"
FT   CDS             232620..233921
FT                   /transl_table=11
FT                   /locus_tag="BB2175"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1756"
FT                   /db_xref="HSSP:1IXK"
FT                   /db_xref="InterPro:IPR001678"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD2"
FT                   /protein_id="CAE32671.1"
FT                   /translation="MLGEVLQWTYPADAVLSHWLRAHPGMGGRDRAELAQAVYDVLRHL
FT                   RRYRQFAESGVGPATRRLAILGLAATMNPEVLAEGLGADEAAWLQRIRHIDVATLPRAV
FT                   RASVPDWLDERLAQLDDSEALLDALNRPANLDIRVNPLKAERDPMLAVLRAGPAGRFDP
FT                   QPMPYSPWGIRLAGHPSVNRWPQFEDGSIEVQDEGSQLLALLMGPRRGEMIIDFCAGAG
FT                   GKTLLLGALMRSTGRLYAFDVSAARLARAKPRFARSGLSNVVPVAIDSENDTRVKRLAG
FT                   KAQRVLVDAPCSGIGTLRRNPDLKWRQHPQSIAEMCELQHRILKSAARCVAPGGRLVYA
FT                   TCSLLAEENAGQAERFLAEHPDFERLDAAQLLANRCANLTLSGPYVQLRPDVHGTDGFF
FT                   AAVFERRKPSAAATQEPAVVAAETGPGEPEDAAG"
FT   misc_feature    232992..233831
FT                   /note="HMMPfam hit to PF01189, DE NOL1/NOP2/sun family,
FT                   score 4.2e-44"
FT   CDS             complement(233918..234292)
FT                   /transl_table=11
FT                   /locus_tag="BB2176"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1757"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD1"
FT                   /protein_id="CAE32672.1"
FT                   /translation="MLRLLPALLALAVPAAWAAGPTVQVGDNVTLASYYQIRGADCAPL
FT                   RPPLVRIVQPPRLGTATVVQSQGNSGPGGRCAHTAVPVTQIVYRGTQPGQDTVIWEVTH
FT                   QPRQPASRRDSAAIMVVPRN"
FT   misc_feature    complement(234239..234292)
FT                   /note="Signal peptide predicted for BB2176 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.997 between residues 18 and 19"
FT   CDS             234554..235762
FT                   /transl_table=11
FT                   /locus_tag="BB2177"
FT                   /product="probable fatty acid desaturase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1758"
FT                   /db_xref="GOA:Q7WKD0"
FT                   /db_xref="InterPro:IPR005804"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKD0"
FT                   /protein_id="CAE32673.1"
FT                   /translation="MDSILSFISGGLTQATWWQIVLFTLVVTHITIVSVTVFLHRSQAH
FT                   RGLDLHPAVMHFFRFWLWMTTGMVTKEWVAIHRKHHAKCEKEGDPHSPMLFGIWKVLFR
FT                   GAELYREESANKETMAKFGHGTPDDWLERNIYSKHSLAGVLTMLAIDLALFGAVGLTVW
FT                   AVQMAWIPFWAAGVVNGIGHYWGYRNYNSPDTSTNVFPWGIIIGGEELHNNHHAHGTSA
FT                   KFSAKWYELDIGWGYISILKFFGLAKVKKVAPKLKLESGSKGIDLSTLQGVITHRYEVM
FT                   ARYGDLVKRAAREELSKLKSSRQQDAANCRWTTLRRVRRWLHRNEEVLQPEQRAEVDQA
FT                   IAQNQSLSTLVQMRRELGRLWESSSASSEQLLHDLQAWCQRAQQSGIAGLEQFALHLRR
FT                   YAA"
FT   misc_feature    join(234596..234664,234974..235042,235055..235114)
FT                   /note="3 probable transmembrane helices predicted for
FT                   BB2177 by TMHMM2.0 at aa 15-37, 141-163 and 168-187"
FT   misc_feature    234602..235258
FT                   /note="HMMPfam hit to PF00487, DE Fatty acid desaturase,
FT                   score 4.1e-05"
FT   misc_feature    235457..235522
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1213.000, SD 3.32 at aa 302-323, sequence
FT                   SRQQDAANCRWTTLRRVRRWLH"
FT   CDS             235759..238059
FT                   /transl_table=11
FT                   /gene="uvrD"
FT                   /gene_synonym="mutU"
FT                   /gene_synonym="pdeB"
FT                   /gene_synonym="rad"
FT                   /gene_synonym="recL"
FT                   /locus_tag="BB2178"
FT                   /product="DNA helicase II"
FT                   /EC_number="3.6.1.-"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1759"
FT                   /db_xref="GOA:Q7WCK2"
FT                   /db_xref="InterPro:IPR014017"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WCK2"
FT                   /protein_id="CAE32674.1"
FT                   /translation="MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQT
FT                   GQASPFALLAVTFTNKAAREMLTRMSTLLPIDTRGLWIGTFHGLCNRMLRAHHRDAGLP
FT                   QAFQILDTTDQLAAIKRLLKAGNIDDEKYPPRDVQRFINGAKEEGLRPGDVEAYDPHRR
FT                   KLIEIYQLYEAQCQREGVVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNT
FT                   LQYKWLRLLAGTGAAIFAVGDDDQSIYAFRGANVGNMADFERDYAHGRVIRLEQNYRSY
FT                   GHILDSANALIGHNTGRLGKNLWTEQGEGEPVRVIEQPSDGMEAQWLVDEIRALINDGR
FT                   MRSEIAVLYRSNAQSRVLEHALFSVGIPYKVYGGLRFFERQEIKHALAYLRLIANPNDD
FT                   TSWMRVVNFPTRGIGARTLEQLSDAARAHDTSLFGAVARVGGKGGSNLAQFAQLIGQMA
FT                   HDTRELPLPELVDHVIEASGLKAHYQTEREGAERLENLNELITAATVFAAEENFEGLPA
FT                   GVVPDHDVSGALMPGVVDAPQPDTLGGLTPLAAFLSHAALEAGDNQAQVGQDAVQLMTV
FT                   HAAKGLEFDAVFITGLEEGLFPHENSIMEPAGLEEERRLMYVAITRARERLYLSLAQSR
FT                   MLHGQTRYAMRSRFLEEIPEQHLKWLSPRAGLHQGGGFGGAAPAWSSRGDAFGRKPTGT
FT                   AAPRQPRGMASGVTVGEQQFRVGQGVRHARFGDGTIIGLSGSGQDAQAQIQFRDVGAKT
FT                   LALGIAKLDIITA"
FT   misc_feature    235774..237195
FT                   /note="HMMPfam hit to PF00580, DE UvrD/REP helicase, score
FT                   5.1e-198"
FT   misc_feature    235831..235854
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(238112..240724)
FT                   /transl_table=11
FT                   /locus_tag="BB2179"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1760"
FT                   /db_xref="GOA:Q7WKC9"
FT                   /db_xref="InterPro:IPR012910"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC9"
FT                   /protein_id="CAE32675.1"
FT                   /translation="MSKPILKKRQRTTLAALLLCTAAATHAATQSPALAFDLPAQPLDA
FT                   ALRAYARQAGVALSFDAREAARKQAPALRATMTAQAALQHLLRGSGLTWRAAGANRYAV
FT                   VRAADAAAAWPLEPVRVYGDATRERVYTEQEIAATPASNRDLSALIATHPAIRESGTAE
FT                   DGANRGTLNVEDISIHGASPYQNLFLIDGVGATSRVDPANKSRNFTDVPSNPQAYFLDT
FT                   ALLGEVRVFDNSIPVEYGAFNGGVVDARLRRPSGENHVKLDYRWNGSNLTRQKIAPGNA
FT                   EDWLQGTPDFTPSWRKRFHTASADIALGERAGLVLGLSRRISRIERWRLGAVGHLDRPE
FT                   RDDSLDRVDNLLGKFSLRLDADTITDLSLKYADRREHLVSNFFRDTDWRNRHGAQGAVW
FT                   NIEHTLRGGKLSAQLGWDRFDSHRNSAHTEFVQHDFVDGRPGFASGGYGKDEKGQRNLT
FT                   LATRLDLAPIQTGPVSHASYVGLQVEHTGARFKRYNQSYSYRAVHREDGTEKHFSKVRH
FT                   LPGSVTLDYTRLGLYASDELTWRRWTLNAGLRYDRDNFLHHRTLAPRARLDWDVLGSDD
FT                   TVLSAGWSRYYGGHVLKIAMQEEFSRLSEQVLDHHGDPVPNGRKITRVNYDGLRSPYDD
FT                   EWAFSLAQRAYGIRGVLTFVHRNGRDQVTRRGDSRVGYRYTNEGNSRTDGWNLTLANEE
FT                   AWRLGETLWHAQASWGYQRNKRNLNLAEGYESSPVERADYVYYNGKRIPAANLPPSNFN
FT                   LPHKVSLDLTGHWPRHGLTWSNTVNWHGRRKEIAFVDTGPAPEYLDMYESLSAPSYWSW
FT                   DTRLIWQPPFARQVTLALDVLNVLNRIAALTTNPRDSLIDARRYRTGREIWLQVGYRY"
FT   misc_feature    complement(240644..240724)
FT                   /note="Signal peptide predicted for BB2179 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.967 between residues 27 and 28"
FT   CDS             complement(241084..243009)
FT                   /transl_table=11
FT                   /locus_tag="BB2180"
FT                   /product="probable ABC transporter ATP-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1761"
FT                   /db_xref="GOA:Q7WKC8"
FT                   /db_xref="HSSP:1F2T"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC8"
FT                   /protein_id="CAE32676.1"
FT                   /translation="MIRASGLTLRRGTKVLLDGADFVVHPGERVGIVGKNGAGKSSLFA
FT                   LLTGALDPDAGNLDLPAGWRIASVQQEIAADAQAAREFVIDGDTHLRALQAQRAALTDD
FT                   QGTQIAETEAALIEAGAWSAASRAEQLLAGLGFKPSEWMQPVRSFSGGWRMRLALARAL
FT                   MAPSELLLLDEPTNHLDLDAMLWLEKWLTAYPGTVLLISHDTEFLDAVARAILHFDQAK
FT                   LQRYRGGYQDFLLQRAERLRQANIAYERQTREAARLQGFIDRFKAKASKAKQAQSRVKA
FT                   LARMEALAPIHAESGIDIRIPSPDHMPDPLLAMEHMDAGYGGAEPILRDVTLMVRAGSR
FT                   IGVLGANGAGKSTLIKTLADELAPHAGTRRASRGLAIGYFHQHQLDMLDLDSTPLAHLA
FT                   RLAPEVREQELRNYLGGFGFSGDTVLSKVGPMSGGEKARLALSLIVWQKPNLLLLDEPS
FT                   NHLDVETREALATALAEFSGSMLLVSHDRHLLRTTVDSFWIVADGGVREFDGDLEDYRD
FT                   WLAARNAGERAAAREAAAGEPGVAVDRKAQRRLEAEQRQRLATLRKPLAAKLAKVEADM
FT                   ERARARLQELDAVIADADLYSDARRTERQQVMTEHGESGKRLNDLEEQWLEIQQALEEI
FT                   EQDNAA"
FT   misc_feature    complement(241501..241998)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   2.1e-27"
FT   misc_feature    complement(241675..241719)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(241954..241977)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    complement(242347..242931)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   1.6e-39"
FT   misc_feature    complement(242521..242565)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(242887..242910)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(243006..243902)
FT                   /transl_table=11
FT                   /locus_tag="BB2181"
FT                   /product="putative adenine-specific methylase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1762"
FT                   /db_xref="GOA:Q7WKC7"
FT                   /db_xref="InterPro:IPR017127"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC7"
FT                   /protein_id="CAE32677.1"
FT                   /translation="MQNNNRQELQTLRDLIRYAVSRLNAARVALGHGSDNAWDEAVYLV
FT                   LHGLHLPPDTLDPFLDARVLPSERSRVLDLIDRRVTERLPAAYLTGEAWLRGHRFHVDR
FT                   RVIVPRSPIAELLDEGLAPWVRDPLQVERALDMCTGSGCLAILAALAFPVAQVDAVDVS
FT                   SDALEVAARNVAEYGLQDRLTLRQGNLFEALPAAAYDVIVCNPPYVNQASMDALPQEYR
FT                   HEPALALAGGADGMDLVRRILAAAPGYLSADGVLVLEIGHERDHFEAAFPDLQPVWLDT
FT                   AESSDQILLLTREQLNT"
FT   misc_feature    complement(243279..243299)
FT                   /note="PS00092 N-6 Adenine-specific DNA methylases
FT                   signature."
FT   CDS             complement(243909..245048)
FT                   /transl_table=11
FT                   /gene="dapE"
FT                   /locus_tag="BB2182"
FT                   /product="succinyl-diaminopimelate desuccinylase"
FT                   /EC_number="3.5.1.18"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1763"
FT                   /db_xref="GOA:Q7WKC6"
FT                   /db_xref="InterPro:IPR011650"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WKC6"
FT                   /protein_id="CAE32678.1"
FT                   /translation="MTASAVLDLVKDLIARPSVTPDDVDCQMLLAQRLERIGFQCETIA
FT                   RGGVTNLWARRGAGAPLTVFAGHTDVVPPGPRDKWDSDPFVPTERDGFLYGRGAADMKS
FT                   SIAAFVVAAEEFVAAHPEHPGSIALLITSDEEGPAVDGTVIVCDELRQRGEQLDYCIVG
FT                   EPTSTEALGDVCKNGRRGSLSGRLLVKGVQGHVAYPHLARNPVHQLAPALTELVAIEWD
FT                   QGNEYFPPTTFQVSNLHAGTGATNVVPGEAVALFNFRFSTASTPGQLKARVHEVLDRHG
FT                   LEYQLDWELGGEPFLTPRGSLTDALVSAIQAETGLQAELSTTGGTSDGRFIARICPQVI
FT                   EFGPCNATIHKVNERIELSSLAPLKNIYRRTLENLLLAD"
FT   misc_feature    complement(244071..245021)
FT                   /note="HMMPfam hit to PF01546, DE Peptidase family
FT                   M20/M25/M40, score 3.4e-85"
FT   CDS             complement(245048..245869)
FT                   /transl_table=11
FT                   /gene="dapD"
FT                   /locus_tag="BB2183"
FT                   /product="2,3,4,5-tetrahydropyridine-2-carboxylate
FT                   N-succinyltransferase"
FT                   /EC_number="2.3.1.117"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1764"
FT                   /db_xref="GOA:P0A4U9"
FT                   /db_xref="HSSP:1TDT"
FT                   /db_xref="InterPro:IPR018357"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A4U9"
FT                   /protein_id="CAE32679.1"
FT                   /translation="MTLDLQTTIEQAWENRANLSPVDASAEVRDAVEHTIDGLDLGRLR
FT                   VAEKIDDQWIVHQWIKKAVLLSFRLHDNAVMGQGPLQFYDKVPTKFAGYGEAAFKAGGY
FT                   RVVPPAVARRGAFIARNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGV
FT                   GIGGVLEPLQANPTIIEDNCFIGARSEVVEGVVVEENSVLAMGVFLSQSTKIYDRATGK
FT                   VSYGRVPSGSVVVPGSLPSEDGSHSLACAVIVKRVDAQTRAKTSINDLLRA"
FT   misc_feature    complement(245219..245272)
FT                   /note="HMMPfam hit to PF00132, DE Bacterial transferase
FT                   hexapeptide (four repeats), score 2.6e+02"
FT   misc_feature    complement(245273..245326)
FT                   /note="HMMPfam hit to PF00132, DE Bacterial transferase
FT                   hexapeptide (four repeats), score 4"
FT   misc_feature    complement(245369..245422)
FT                   /note="HMMPfam hit to PF00132, DE Bacterial transferase
FT                   hexapeptide (four repeats), score 5.9"
FT   misc_feature    complement(245381..245467)
FT                   /note="PS00101 Hexapeptide-repeat containing-transferases
FT                   signature."
FT   misc_feature    complement(245423..245476)
FT                   /note="HMMPfam hit to PF00132, DE Bacterial transferase
FT                   hexapeptide (four repeats), score 1.7e+02"
FT   CDS             complement(245895..247109)
FT                   /transl_table=11
FT                   /gene="dapC"
FT                   /locus_tag="BB2184"
FT                   /product="N-succinyl-L,L-diaminopimelate aminotransferase"
FT                   /EC_number="2.6.1.17"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP1765"
FT                   /db_xref="GOA:Q7WKC5"
FT                   /db_xref="InterPro:IPR019878"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC5"
FT                   /protein_id="CAE32680.1"
FT                   /translation="MLKSCPMNPRLDALHPYPFEKLRALLADAGKPTHDLPPINLSIGE
FT                   PKHAAPACVGQAIAANLAGLSVYPSTKGEPALRQAISQWLSRRYSIPAPDPESEVLPVL
FT                   GSREALFAFAQTVIDPSAGALVVCPNPFYQIYEGAALLAGATPYYVNADPARDFGCDWA
FT                   RVPDEVWRRTQLVFVCSPGNPAGNVMSLEEWRTLFELSDRHGFVIAADECYSEIYLDED
FT                   NPPLGSLQAARRLGRDRYTNLVAFSSLSKRSNVPGMRSGFVAGDAALLARFLLYRTYHG
FT                   SAMSPVVSAASIAAWSDETHVQENRRQYRAKFEAVLPILQNVLDVRAPQASFYLWAGTP
FT                   GSDTAFARELYGRTGVTVLPGSLLAREAHNANPGQGRIRIALVAPLDQCVQAAERIAHF
FT                   ARTSI"
FT   misc_feature    complement(245910..246863)
FT                   /note="HMMPfam hit to PF00155, DE Aminotransferase class I
FT                   and II, score 1.5e-13"
FT   misc_feature    complement(247029..247058)
FT                   /note="PS00215 Mitochondrial energy transfer proteins
FT                   signature."
FT   tRNA            247137..247223
FT                   /note="tRNA Leu anticodon TAG, Cove score 68.96"
FT   CDS             247391..248380
FT                   /transl_table=11
FT                   /locus_tag="BB2185"
FT                   /product="integrase"
FT                   /note="Similar to Ralstonia solanacearum probable
FT                   integrase/recombinase protein rsc1655 or rs03938
FT                   SWALL:Q8XYV1 (EMBL:AL646065) (334 aa) fasta scores: E():
FT                   6.7e-47, 43.88% id in 335 aa, and to Pasteurella multocida
FT                   putative integrase/recombinase rcI SWALL:Q9L6A5
FT                   (EMBL:AF237934) (329 aa) fasta scores: E(): 1.3e-36, 37.34%
FT                   id in 332 aa"
FT                   /db_xref="GOA:Q7WKC4"
FT                   /db_xref="InterPro:IPR002104"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC4"
FT                   /protein_id="CAE32681.1"
FT                   /translation="MGTYRKRGDTWRAEINKAGVRESKTFPTKREAQEWAAARETELAT
FT                   IAVGGITPKTVAQVLQRYCDEISPRNKGHRWERVRIARFLKEEADLCAKLIHTISTADL
FT                   GAWRDRRLAQVQPVSVRRDIALLRAAWGYARREWRNLKDDPWLDLTMPPEGRHRERIYT
FT                   QDEVDRLVLALGWEEGQKVVTARQQTAVCFLLSLETAMRSGELLSLEHSQVDLKKRVAQ
FT                   LDQTKNGDRRAVPLSSRAVALFKSLAGLDDAKVFTITPALRDVYFRQGKAIAEVDGATF
FT                   HDARATALTRLSKKLSILELARMVGHRDPRSLMIYYRESAADIAKKLD"
FT   misc_feature    247391..286703
FT                   /note="Prophage"
FT   misc_feature    247874..248368
FT                   /note="HMMPfam hit to PF00589, DE Phage integrase family,
FT                   score 1.3e-21"
FT   CDS             complement(248377..248577)
FT                   /transl_table=11
FT                   /locus_tag="BB2186"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Vibrio cholerae transcriptional regulator
FT                   vc0497 SWALL:Q9KUL8 (EMBL:AE004136) (66 aa) fasta scores:
FT                   E(): 0.032, 28.57% id in 63 aa"
FT                   /db_xref="InterPro:IPR010260"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC3"
FT                   /protein_id="CAE32682.1"
FT                   /translation="MEDRFITHTEIASLLQLNPAHVRDRLTKRKDFPRPFIFGGARRWK
FT                   YSEVEDWIDGRRQAPDGRRAA"
FT   CDS             complement(248578..248697)
FT                   /transl_table=11
FT                   /locus_tag="BB2187"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC2"
FT                   /protein_id="CAE32683.1"
FT                   /translation="MPDLPYLALLGIAVGAVVALALALHRWLSREIEKEEREE"
FT   misc_feature    complement(248635..248697)
FT                   /note="Signal peptide predicted for BB2187 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.942) with cleavage site
FT                   probability 0.844 between residues 21 and 22"
FT   CDS             complement(248690..249355)
FT                   /transl_table=11
FT                   /locus_tag="BB2188"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Bacteriophage Mx8 hypothetical 25.3 kDa
FT                   protein SWALL:O03965 (EMBL:U64984) (222 aa) fasta scores:
FT                   E(): 0.00013, 42.54% id in 228 aa, and to Xylella
FT                   fastidiosa phage-related protein xf0485 SWALL:Q9PG17
FT                   (EMBL:AE003898) (181 aa) fasta scores: E(): 0.0047, 37.73%
FT                   id in 212 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC1"
FT                   /protein_id="CAE32684.1"
FT                   /translation="MRERPILFSGPMVRAILAGTKTQTRRVAKPVRHPDLGNVYTPGAL
FT                   ALEREPQHVIDRTCPYGQPGDRLWVRETWNRFEPWSGTHYAANYDGFGIGPDDDPDHIP
FT                   DHKVRWRPSIHMPRAACRLVLEVTGVRVERLQDMTLDDLCEEGISELLEDPDSVPGRAF
FT                   SRAEHAAIGGVPMQHIPEMYGFAALWDSLNGSSSWSANPWVWVVEFRRAGTKDGASHA"
FT   CDS             complement(249348..250517)
FT                   /transl_table=11
FT                   /locus_tag="BB2189"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKC0"
FT                   /protein_id="CAE32685.1"
FT                   /translation="MTTQNNAAQSVLTDEEIQDIADLFDIYGEKPEFARAVESTLLSKL
FT                   RAPVPDGKRPDLDWIEGVRVTDTVGRGWCVRIDGTDIYEDANRYGCKGRKSFQIASGLS
FT                   NKQEAERAALEWLDRQRAALASAPVADERALHIKALQDLRLGVEMDQHCMEDGDAKLAA
FT                   LDAAITALRWSAGALQALNIEADKITLDGETRTVGDILDHADRALANAPVAGEAQPVGW
FT                   FQNDAGKGEPPHYSQVSDEYAGELDVYPFYAAAQASAEARDAAAVRDTGKDRLSFHIWA
FT                   LVHGMDITPNDSCGYVSPLTQRAWMRWNPPAPAALAAQPGAIRNPLIAEPSGNPGELER
FT                   AGDAPREDDMLTIAYLARAQAEKERAALAARKEGDALSATQTEQGEQDA"
FT   CDS             complement(250617..251036)
FT                   /transl_table=11
FT                   /locus_tag="BB2190"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB9"
FT                   /protein_id="CAE32686.1"
FT                   /translation="MFSINQQECRMHFDSNTKKDDQPSATLQFTYRTSNDVLSEFSPDL
FT                   KSSLYRRPSEGLRQRDQRGPGANLYRRMHEVHMTTPTQAAQGNAWNCWPCWPRICRCGD
FT                   PKTLEECQDGQGLGDADVGGLRDMRESPAHARSTA"
FT   CDS             complement(251125..251772)
FT                   /transl_table=11
FT                   /locus_tag="BB2191"
FT                   /product="phage-related exonuclease"
FT                   /note="Similar to Bacteriophage VT2-Sa ExOnuclease exO
FT                   SWALL:Q9T1N7 (EMBL:AP000363) (226 aa) fasta scores: E():
FT                   1.4e-11, 31.06% id in 206 aa, and to Escherichia coli
FT                   O157:H7 exonuclease exo or ecs1174 SWALL:Q9KXG3
FT                   (EMBL:AP000422) (226 aa) fasta scores: E(): 1.2e-11, 31.06%
FT                   id in 206 aa"
FT                   /db_xref="GOA:Q7WKB8"
FT                   /db_xref="InterPro:IPR019080"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB8"
FT                   /protein_id="CAE32687.1"
FT                   /translation="MNRYILSPHEQGSDGWLLDRCGRVTGSRAADMLAMTAKKEWSTKR
FT                   ADYKFELAIEVLTGMPQGSDYTSKEMQWGIDQEPFARMAYEEASGNVAIESGFMYLPDV
FT                   AAGCSVDGLFVEDGRRGVLETKCPKSTTHIRYLEAGTLPDQYRPQCLHNVWVTGAEFAD
FT                   FVSFDPRFPEELQLFVCRFTPTAKELADHEKAVLQFLAERDELVAQLKRLAA"
FT   CDS             complement(251769..252755)
FT                   /transl_table=11
FT                   /locus_tag="BB2192"
FT                   /product="phage-related DNA recombination protein"
FT                   /note="Similar to Escherichia coli rect protein RecT or
FT                   b1349 SWALL:RECT_ECOLI (SWALL:P33228) (269 aa) fasta
FT                   scores: E(): 8e-10, 30.51% id in 213 aa, and to Proteus
FT                   vulgaris DNA recombination protein orf223 SWALL:BAB93785
FT                   (EMBL:AP004237) (510 aa) fasta scores: E(): 7.8e-13, 31.74%
FT                   id in 315 aa"
FT                   /db_xref="GOA:Q7WKB7"
FT                   /db_xref="InterPro:IPR018330"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB7"
FT                   /protein_id="CAE32688.1"
FT                   /translation="MNNLAVITQDIYNARESFAAVLTDQSISFEKEAGFAIQVLQNNDY
FT                   TLKVATGNRQSVINAVTNVAAIGISLNPAKRQAYLVPRDGRICLDISYMGLIDLAVATG
FT                   SIRWAQAELVRSADTFALNGFDAPPTHVFNPFSKERGEIIGAYVVVKTADGDYLTTPMS
FT                   RDEIDGIMNRSQSVKSGKSSPWKTDYGEMAKKTVVKRAYKYWPKNDRLSEAIHHLNTDG
FT                   GEGLATTASAPVDPDLLPRLRKAVDAARDAAALEKVWKDGLAEVRATRDMAIYNAFKSA
FT                   VAARGAVLRGEAVSTEPPPDDGKTIDEPPRDPSDDGFGRDDQGGIQE"
FT   misc_feature    complement(252117..252671)
FT                   /note="HMMPfam hit to PF03837, DE RecT protein, score
FT                   1e-09"
FT   CDS             complement(252759..252941)
FT                   /transl_table=11
FT                   /locus_tag="BB2193"
FT                   /product="phage-related putative membrane protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB6"
FT                   /protein_id="CAE32689.1"
FT                   /translation="MSRRLIAYLRATRLDLDLAGYAAMVAALAVATGLIGPTLDARSTL
FT                   TACEGCGKTAVAAKE"
FT   misc_feature    complement(252780..252803)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    complement(252825..252884)
FT                   /note="1 probable transmembrane helix predicted for BB2193
FT                   by TMHMM2.0 at aa 20-39"
FT   CDS             complement(252938..253315)
FT                   /transl_table=11
FT                   /locus_tag="BB2194"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="InterPro:IPR010916"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB5"
FT                   /protein_id="CAE32690.1"
FT                   /translation="MLPLTYPTECGTAAVVRPLTDAERLAELRRDLDADLHYALVAQRC
FT                   VRWPYGDPELVAEALYAATIGDAQSEAAFSLLVRAAARGESAVSVGTLFVEWTKLARAR
FT                   LLDTLVELTEDGQRVTFGSRQ"
FT   misc_feature    complement(253073..253315)
FT                   /note="PS00430 TonB-dependent receptor proteins signature
FT                   1."
FT   CDS             complement(253318..253527)
FT                   /transl_table=11
FT                   /locus_tag="BB2195"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB4"
FT                   /protein_id="CAE32691.1"
FT                   /translation="MPGTGDTMETTYISDEQAVQVMAQLGGSFMKQLARLWMTADPLRR
FT                   ARLKEAFRDDFDRYRDMAARSDEA"
FT   CDS             complement(253547..254014)
FT                   /transl_table=11
FT                   /locus_tag="BB2196"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB3"
FT                   /protein_id="CAE32692.1"
FT                   /translation="MSDTKATLKFEVTLADLRRDGACFEGYNKVVRAVQGREFSGDDSE
FT                   RESYIKFSHAEPVALTAILASNGLDDALWALRCVPGVDRDARLFAVWCARQVEHLMTDQ
FT                   RSKDALDVAERFANGEATEEERDAARAAAWDAQKEMFIAMCEGRAPWQQTT"
FT   CDS             complement(254050..254292)
FT                   /transl_table=11
FT                   /locus_tag="BB2197"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB2"
FT                   /protein_id="CAE32693.1"
FT                   /translation="MEAKLIERVALNDEFQAACQRYAHGNGSSMAIAGEALRAAGMPEL
FT                   LQAAVLVRDYLHRNGTRQGDVPLALIEAIRATGAA"
FT   CDS             complement(254489..255511)
FT                   /transl_table=11
FT                   /locus_tag="BB2198"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Bacteriophage 933W, and Stx2 converting
FT                   bacteriophage I hypothetical 39.1 kDa protein l0095
FT                   SWALL:Q9T208 (EMBL:AF125520) (349 aa) fasta scores: E():
FT                   1.5e-57, 51.17% id in 342 aa, and to Escherichia coli
FT                   O157:H7 hypothetical protein Z1456 SWALL:Q8X497
FT                   (EMBL:AE005296) (347 aa) fasta scores: E(): 1.5e-57, 51.17%
FT                   id in 342 aa"
FT                   /db_xref="InterPro:IPR018874"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB1"
FT                   /protein_id="CAE32694.1"
FT                   /translation="MVMHMAEKKVAGRAAGGAARAKSLTAEQRSESARKAAKAKAAKAK
FT                   LPIATHGSTDHPLRLGDIDIPCYVLEDGTRLLSLTGLNGALKISSGSTRSGDSRLVQFI
FT                   ESDSIRPYAKNQLAEALRKPIEFIPPHGGRSAHGYPATVLADICEGVLAAREAGPLTAT
FT                   QQAIAKQCEILVRGFARVGIIALVDEATGYEKDRAKNELAKILEAFVAKELQPYVKAFP
FT                   TDYYEQMFRLRGLKYPPDNPRFRPQYFGVLTNDIVYSRVAPGLLEELKKQAAKDEKKAH
FT                   LHRRLTQEIGHPKLREHLASVVTAMKLSSDYPDFITKLNRLHPRFEGQSTLDLEDADKG
FT                   "
FT   CDS             complement(255650..256279)
FT                   /transl_table=11
FT                   /locus_tag="BB2199"
FT                   /product="putative phage repressor protein"
FT                   /note="Similar to Bacteriophage D3 repressor protein CI
FT                   SWALL:RPC1_BPD3 (SWALL:Q37906) (223 aa) fasta scores: E():
FT                   1.1e-05, 28.67% id in 143 aa, and to Neisseria meningitidis
FT                   putative regulator nma1884 SWALL:Q9JTC1 (EMBL:AL162757)
FT                   (234 aa) fasta scores: E(): 3.9e-06, 28.72% id in 188 aa"
FT                   /db_xref="InterPro:IPR019759"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKB0"
FT                   /protein_id="CAE32695.1"
FT                   /translation="MRIGGVPAPWEPGGTTTRQMERHSQGLRISQAVNVGHVEDSGYSA
FT                   NDHEFIPIPELDVRLAAGKLGIENYQETEIGQILLRRSFLESFKRPIKRMRICYGNGPS
FT                   MEPVIRHRNPMLVDVHPVSLDEVQPRFVYAINRGGKMIVKCLERWKDGRWMAISTNPDP
FT                   DHHPFPLATDDGGEVRIIGTVLWSPYDLRNGVDERLLQGWHQASGW"
FT   CDS             complement(256759..257079)
FT                   /transl_table=11
FT                   /locus_tag="BB2200"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA9"
FT                   /protein_id="CAE32696.1"
FT                   /translation="MSNLLLGLGGQLGPDAGPVAGTQITAAYFAAGGPLYRCAMLDRNR
FT                   SAARAPLIDECRGHSDLARQRCSTGGVFPVEIAIQVHGPNYSVAIAQTQAMLQNNLNSI
FT                   AI"
FT   CDS             complement(257072..257770)
FT                   /transl_table=11
FT                   /locus_tag="BB2201"
FT                   /product="phage-related putative membrane protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA8"
FT                   /protein_id="CAE32697.1"
FT                   /translation="MSGRLLLRRCGGGQSSMGASLKVGIGSLAELLGQATNALLVSIRS
FT                   QQIGPLQRKPLPSCEVENVAAVGRPQSVPAERRIGDSYTFLIYAGGTRLKLFDRIALFL
FT                   WRDRYDYDPTRGCPGEQNNISLWTRLRPARKRLIAVLLNGQLWLAFIGGMFALGAALLP
FT                   GYLDRVKTDQQVNTNAGELLLRCVQEADHVLRCRPVSDGQDEIVSGVDGPSLNSNRPRH
FT                   ENPAQDVKHE"
FT   misc_feature    complement(257273..257341)
FT                   /note="1 probable transmembrane helix predicted for BB2201
FT                   by TMHMM2.0 at aa 144-166"
FT   CDS             complement(257785..258039)
FT                   /transl_table=11
FT                   /locus_tag="BB2201A"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA7"
FT                   /protein_id="CAE32698.1"
FT                   /translation="MEEQELRHRLAVAEGNIAGLVAVIGALVRQLPEEQRLHLEARAEA
FT                   MFEPLEAAMLGDADPYSDSSLAGLRNVRTMLSDLLSRSA"
FT   CDS             complement(258125..258289)
FT                   /transl_table=11
FT                   /locus_tag="BB2202"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA6"
FT                   /protein_id="CAE32699.1"
FT                   /translation="MTETEKLLNHAQEIARRAFDDPSEKTVMDLFDELRAERDRRAWEG
FT                   SDAAGATVH"
FT   CDS             258377..258685
FT                   /transl_table=11
FT                   /locus_tag="BB2203"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Ralstonia solanacearum hypothetical
FT                   protein rsc1905 or rs03473 SWALL:Q8XY58 (EMBL:AL646067) (57
FT                   aa) fasta scores: E(): 0.00041, 39.62% id in 53 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA5"
FT                   /protein_id="CAE32700.1"
FT                   /translation="MNAPVPVHFHMQKPSMERAFRQALTDPSTRAKARDRLGWDDSQVS
FT                   RFLSGQMGLTIDKIDAAIEVLGMVVTSPDYMDFLAYGAKIGANCHCARAGMGECGTR"
FT   misc_feature    258458..258523
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1119.000, SD 3.00 at aa 28-49, sequence
FT                   STRAKARDRLGWDDSQVSRFLS"
FT   CDS             258688..259095
FT                   /transl_table=11
FT                   /gene="ninB"
FT                   /locus_tag="BB2204"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Bacteriophage lambda protein NinB
FT                   SWALL:NINB_LAMBD (SWALL:P03765) (146 aa) fasta scores: E():
FT                   1.5e-09, 34.92% id in 126 aa, and to Yersinia pestis
FT                   putative phage protein NinB or ypo2089 SWALL:Q8ZER6
FT                   (EMBL:AJ414151) (142 aa) fasta scores: E(): 2.1e-12, 47.17%
FT                   id in 106 aa"
FT                   /db_xref="HSSP:1PC6"
FT                   /db_xref="InterPro:IPR008711"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA4"
FT                   /protein_id="CAE32701.1"
FT                   /translation="MRYPLNSRTRQRAHRDIDAAPDGHYFAPPVEPTRTLGQSAKLHAM
FT                   LADVARQVEWPVNGKMEHLSVGDWKAVVVASLMQEKRMAAGLRGGFVILGKRTSSMTIR
FT                   EMSDAIEFLYSFGAEQGVQWSEPVDVPGWVR"
FT   misc_feature    258877..258921
FT                   /note="PS00211 ABC transporters family signature."
FT   CDS             259095..259544
FT                   /transl_table=11
FT                   /locus_tag="BB2205"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Bacteriophage T7 hypothetical gene 7.7
FT                   protein 7.7 SWALL:Y77_BPT7 (SWALL:P03796) (130 aa) fasta
FT                   scores: E(): 1.6e-11, 34.32% id in 134 aa, and to Ralstonia
FT                   solanacearum putative bacteriophage-related protein rsc3236
FT                   or rs02453 SWALL:Q8XUF2 (EMBL:AL646074) (183 aa) fasta
FT                   scores: E(): 1e-15, 41.06% id in 151 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA3"
FT                   /protein_id="CAE32702.1"
FT                   /translation="MTALERFLSKVERAEGCWQWKGAKKATGYGNFYLDRKYIGAHCAS
FT                   FRLLVGDIPAGMYVCHTCDTPSCVNPEHLFLGTPAENQADMARKGRAVGMRQGGEHHPM
FT                   AKLTIAQVNEIRARRAAGEKLKDLARSFGVSESNVSVVANCRSWA"
FT   misc_feature    259461..259526
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1638.000, SD 4.77 at aa 123-144, sequence
FT                   EKLKDLARSFGVSESNVSVVAN"
FT   CDS             259541..259957
FT                   /transl_table=11
FT                   /locus_tag="BB2206"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Bacteriophage phiE125 gp63 63
FT                   SWALL:Q8W6N7 (EMBL:AF447491) (112 aa) fasta scores: E():
FT                   6.7e-12, 45.09% id in 102 aa, and to Escherichia coli, and
FT                   Bacteriophage 82 hypothetical protein ybco in lambdoid
FT                   dlp12 prophage region ybco or b0549 SWALL:YBCO_ECOLI
FT                   (SWALL:Q47271) (96 aa) fasta scores: E(): 0.73, 37.66% id
FT                   in 77 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA2"
FT                   /protein_id="CAE32703.1"
FT                   /translation="MNLARRTPMSRKTPLRASTGLARAAIKRRAPKKRPGYHDPKYLAA
FT                   CRGERCYQQFAGCCSYKGDPTVVPAHQNQGKGTGLKVPDRFTVPACYHCHTLYDQSGLD
FT                   REHKRATWDWGYTRWEPVCAAKLTANDDKMKEAA"
FT   misc_feature    259811..259828
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT   CDS             259957..260781
FT                   /transl_table=11
FT                   /locus_tag="BB2207"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Salmonella typhi hypothetical protein
FT                   Sty2063 SWALL:Q8Z5Z8 (EMBL:AL627272) (262 aa) fasta scores:
FT                   E(): 1.5e-07, 24.43% id in 266 aa, and to Escherichia coli
FT                   O157:H7 hypothetical protein z2397 z2397 or ecs1944
FT                   SWALL:Q8X8R8 (EMBL:AE005370) (262 aa) fasta scores: E():
FT                   1.7e-06, 25.46% id in 267 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTF4"
FT                   /protein_id="CAE32704.1"
FT                   /translation="MANDWIKMRTDLYRDPRICVMADILMNEDGELARYVNQHCQRHMS
FT                   VTRNVMRNVTVGALVSVWGVMRLRGKAEGTDLVCRAVTTSVLDDIADLPGMGAAMEAVG
FT                   WVVSTAEGLVFPRFFEDHNVDPDASPKSKSAARQQRYRERQKLESDVTRNVTRNVTRDA
FT                   KVTPREEKSREEKDNPQSPLPGAEGWRLPDWIPADPWRQFEEMRRKKKKPMTDAARKLA
FT                   VTKLDALRAAGHDVATMMDQSILHAWDTFYPPKADAALQGALGSDQPWTGAV"
FT   CDS             260778..261149
FT                   /transl_table=11
FT                   /locus_tag="BB2208"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTE8"
FT                   /protein_id="CAE32705.1"
FT                   /translation="MIGHQSLIAARMGGYRPTDVWLTCLTAEQPCGRFTHPEAQLGQMT
FT                   NGRWVGFPDIHIHDDENAAALDLRVVVGLVVHIVAPSRSRAMQLLRRVRDFSPAKAIAS
FT                   GEWGILLWDPAADLQELRV"
FT   CDS             261146..262087
FT                   /transl_table=11
FT                   /locus_tag="BB2209"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="GOA:Q7TTB6"
FT                   /db_xref="InterPro:IPR007694"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTB6"
FT                   /protein_id="CAE32706.1"
FT                   /translation="MSQIISSNDVDFQAYMAEAEPQAKVLAAEAWRDDLVRTVEHGDQI
FT                   TGAKLPWSKTHDLLRFRPGEVTLWQGINGHGKSELLGQACIGFATQGERVCIASFEMKP
FT                   QATLKRMLRQTAMNARPGVQAVDRLIDWSRDRLWLYDQQGTVTPAMLYAVIRYCADRLK
FT                   VRHMVIDSLMKCVRGEDDYNGQKDFVDMLCTLARDLRMHIHLVHHAKKGENEDQVPGKF
FT                   SAKGSGAIVDQVDQMLTVWRNKKKERIAEAELRKDGEVSADTHDSPDTLLICDKNRHGE
FT                   WEGRIQLWRHADSLQFTGDKRRQPLDMIGALA"
FT   misc_feature    261356..261379
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             262084..262767
FT                   /transl_table=11
FT                   /locus_tag="BB2210"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to bacteriophage WO hypothetical 16.7 kDa
FT                   protein gp11 SWALL:Q9JMN0 (EMBL:AB036666) (151 aa) fasta
FT                   scores: E(): 1.7e-13, 36.61% id in 142 aa, and to Ralstonia
FT                   solanacearum putative bacteriophage-related protein rsc3228
FT                   or rs02445 SWALL:Q8XUG0 (EMBL:AL646074) (154 aa) fasta
FT                   scores: E(): 1.1e-21, 46.35% id in 151 aa"
FT                   /db_xref="GOA:Q7TTF0"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTF0"
FT                   /protein_id="CAE32707.1"
FT                   /translation="MTHVDLIAGQPAGVPLDPLAGTLAGSHARVPTFDLEKINTDVADP
FT                   WARGGAETAPDAAPRRANAGSTVVPELGPNVTILALDLGTKLGWAVRGRDGRTSHGTEV
FT                   FTPRASWSPGQRWLRARSFLVEVITQRQVHAIAYEDVKRHTGTDAAHAYGAFLCIVEML
FT                   ADSHRLRLLPVGVGTIKKHWTGKGNADKADMIAEAKARGFRPETDNDADALAILSWAVA
FT                   QERAA"
FT   CDS             262764..262967
FT                   /transl_table=11
FT                   /locus_tag="BB2211"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTF6"
FT                   /protein_id="CAE32708.1"
FT                   /translation="MTWARRSERGDPLKVLERRQEPPPLRSCAGCAHIRLVKSEFDGRR
FT                   ILACGHGMQVGQRCRLFEERGR"
FT   CDS             262964..263404
FT                   /transl_table=11
FT                   /locus_tag="BB2212"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTH4"
FT                   /protein_id="CAE32709.1"
FT                   /translation="MKTPKLLLDRLPSDFHARLENWGEVMRSRPHYAVSPTYEVCRRLA
FT                   KRAGQGAWGGEEDMRELDESDAGLIEAAWRNSVYRMLHQHRDILRAHYVTRSYWRATCR
FT                   ALDLRSREYDDVLVRAVSNFEDFVARYAVVMHNPAQDRPTTV"
FT   CDS             263723..264094
FT                   /transl_table=11
FT                   /locus_tag="BB2213"
FT                   /product="phage-related putative DNA binding protein"
FT                   /note="Similar to Lactobacillus delbrueckii putative DNA
FT                   binding protein SWALL:Q8VN11 (EMBL:AJ421486) (112 aa) fasta
FT                   scores: E(): 0.0039, 31.81% id in 88 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTB1"
FT                   /protein_id="CAE32710.1"
FT                   /translation="MARPKKELPDLGQIEALASKGLNEEQIASALGISYSTLRRHKASN
FT                   EQLQAALKKGKALGIADVSSALYDAAVGGNVTAMIFYLKNRSPDSWRDKPDSTNDDNAP
FT                   PPVKVVIEVKDASVPDAEP"
FT   misc_feature    263786..263851
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1787.000, SD 5.27 at aa 22-43, sequence
FT                   LNEEQIASALGISYSTLRRHKA"
FT   CDS             264081..265358
FT                   /transl_table=11
FT                   /locus_tag="BB2214"
FT                   /product="putative phage terminase"
FT                   /note="Similar to Bacillus subtilis PbsX phage terminase
FT                   large subunit XtmB SWALL:XTMB_BACSU (SWALL:P39786) (433 aa)
FT                   fasta scores: E(): 0.2, 21.58% id in 417 aa, and to
FT                   Yersinia pestis hypothetical 47.8 kDa protein y1030 or
FT                   ypmt1.24C SWALL:O68741 (EMBL:AF074611) (418 aa) fasta
FT                   scores: E(): 2.8e-17, 27.75% id in 436 aa"
FT                   /db_xref="InterPro:IPR004921"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTC2"
FT                   /protein_id="CAE32711.1"
FT                   /translation="MPSLNQPQARFLALPHKFRAFVAGFGSGKTWVGGAGLCRHAWEFP
FT                   RVNSGYFAPTYGQIRDIFYPTIEEVAHDWGLAAKINESNKEVHLFAGRKYRGTVICRSM
FT                   EKPGDIVGFKIGKGLIDELDVMKTDKAALAWRKIIARLRHTAPGLINGVDVTTTPEGFK
FT                   FVYQQFVKQVRERPDLVALYGLVQASTYENGKNLPEDYIPSLRASYPPQLIAAYLRGQF
FT                   TNLTSGSVYPNFDRRLHHTDAAEEPHEELHIGMDFNVLNMTATVNVIRAGLPLTVGELT
FT                   KVRDTPEMARMLKERFKDKGHGVTIYPDASGGNTSSKNASESDLSILRKAGFTVRVNSR
FT                   NPAVKDRINAVNGMLLNDEGARRWLVNTDRCPTLTEALEQQAYDKNGEPDKSTGHDHPN
FT                   DAQGYFLVHRYPITPTGMSRIKLTGT"
FT   misc_feature    264147..264170
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             265361..266779
FT                   /transl_table=11
FT                   /locus_tag="BB2215"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Bacteriophage MB78 60 kDa protein gp62
FT                   SWALL:Q9T0Q3 (EMBL:Y19202) (540 aa) fasta scores: E():
FT                   2.1e-31, 31.2% id in 455 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTF7"
FT                   /protein_id="CAE32712.1"
FT                   /translation="MPVDSKHPLWTASQPRWERCRTALQGQDAVHAAGTKYLPKLAGQE
FT                   QEEYDAYKGRALFYGATARTEEALIGMVFRKEPTVTLPAALQPMIEDADLAGTPVDTFI
FT                   ENVVKEVIDVTRVGVLVDYPVASGEFMTVGQAQAVGLRPYLATYKAEAIINWRTARVSG
FT                   VNQLVLVVLAETYTEQKDEFTAEEKTQYRVLDLADGAYRVRIYRTDLNTPAFEYTPMMN
FT                   GKRLPYIPFVLIGRNGEAIDPQKPVLLDLVDVNMSHYRGTADYEHALHFTALPTAVVTG
FT                   HELQAGQSLKIGSSEAWVFSEAEARAQYLEFSGQGLDSIKVSLERKEGMMATLGARILA
FT                   PEKRDAEAAETAKIHRAGENSVLGGIALGVGRSLAKAFRWAAEWAGAGSGTVEVKLNTE
FT                   FFPVGLTAQDLTALVGALQAAAISPETFYDNMRRGGIIDDGVTFEEEQARIEAAGPALG
FT                   TLGGQDGQPANRAV"
FT   CDS             266808..267860
FT                   /transl_table=11
FT                   /locus_tag="BB2216"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to bacteriophage phi ETA orf42 SWALL:Q9G003
FT                   (EMBL:AP001553) (320 aa) fasta scores: E(): 0.89, 23.1% id
FT                   in 264 aa, and to Yersinia pestis hypothetical phage
FT                   protein Ypo2108 ypo2108 SWALL:Q8ZEQ2 (EMBL:AJ414151) (370
FT                   aa) fasta scores: E(): 4.2e-52, 43.17% id in 359 aa"
FT                   /db_xref="InterPro:IPR017029"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WKA1"
FT                   /protein_id="CAE32713.1"
FT                   /translation="MRYSNGVVRRIIALLNRVDIDLAEQVARAMERLPASAFTVARLDA
FT                   VLKDVRNLNAEAYRQVRGELEKDLRDLAGYEVGYQSQLFESLGIEFTTRGVTAGQVYVG
FT                   AMAQPFQGRLLREWMAGLESGRASRIRDAVRMGYVEGQTIQQVVQRVRGTRAKGYADGL
FT                   LEIDRRNAEAVVRTAISHTAGLARDRWYEANDDIIGALVWVSTLDSRTSQMCRLRDGLQ
FT                   YTTDHKPIGHRVPWGAGPGKLHWCCRSGSVPILKGMEDDPLIGTRAAKDYRDSARGKGE
FT                   QVRATTTYAEWLRRQPAAIQDDILGPTRGALFRKGGVELESFYNDRGVYLTLAELRRKD
FT                   AAAFARAGVK"
FT   CDS             267860..268108
FT                   /transl_table=11
FT                   /locus_tag="BB2217"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTL8"
FT                   /protein_id="CAE32714.1"
FT                   /translation="MCMPLHLVPDAPKPAETEKDRIRKRIKALPKPKDMIQCHRCGARE
FT                   VIETRIGVFESGRSWSGGTKVLLCALCFVRGERVVLK"
FT   CDS             268232..268834
FT                   /transl_table=11
FT                   /locus_tag="BB2218"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTE1"
FT                   /protein_id="CAE32715.1"
FT                   /translation="MPLDRNDPEVKALIEEVTAEATEALSAKNKELIAELRTAKAKAKG
FT                   SEIDPEEHARLQTQVEELTGKLEKATKDSARQIEKLTKDLTEKEGALTQHLIDGGLSTA
FT                   LAKAGVAPHFMDAVKAMLRSQTSIKDGAAVIGDKLLDDHVMEWASTDQGKHFITAPANT
FT                   GGGGQGGNGGGKCTGNMGGSREDRVAALKAKFPELSG"
FT   CDS             268861..269829
FT                   /transl_table=11
FT                   /locus_tag="BB2219"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Yersinia pestis putative phage protein
FT                   ypo2110 SWALL:Q8ZEQ0 (EMBL:AJ414151) (401 aa) fasta scores:
FT                   E(): 1.1e-09, 27.98% id in 318 aa"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTI3"
FT                   /protein_id="CAE32716.1"
FT                   /translation="MSISQMQVFNKYFMPAIIETLGQQIQKFNAASRGAIMLTTAGFEG
FT                   DFLQESFYQAIHGARRRVDRYAANGSASPTDLTQLKHSSVKVAGGFGPIRYEPSQMTWL
FT                   EKPTAEGIEVASRHFAEALLQDQLNTAIAALVAAISNQALATVNVSAKTGLNYSVLNDA
FT                   HAKFGDSSGLIVANVMSGQVYHKLIGQNLVNAQQLFEYGAVTVVDILGKTVVVTDAPAL
FT                   YATGTPNLQKVLGLVAGAATVSDGGDLITNIETSNGKERIETTFQADYTFGLGLKGYTW
FT                   DEATGGKSPTDAELATGTNWDKVATDIKHTAGVIAIGDASK"
FT   CDS             269839..270096
FT                   /transl_table=11
FT                   /locus_tag="BB2220"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTJ2"
FT                   /protein_id="CAE32717.1"
FT                   /translation="MKAKLPIWYLPGPFYRYEQDVKAEAAKAGVRIVDANATEDRKGAA
FT                   KDVPKVTLKPEYRPKGKAEAAKEKELEPTPKDPVKDPAKA"
FT   CDS             270159..270641
FT                   /transl_table=11
FT                   /locus_tag="BB2221"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Yersinia pestis hypothetical phage
FT                   protein Ypo2111 SWALL:Q8ZEP9 (EMBL:AJ414151) (176 aa) fasta
FT                   scores: E(): 4.1, 26.94% id in 167 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTJ4"
FT                   /protein_id="CAE32718.1"
FT                   /translation="MPLIVEDGSGLANADSYVSVADCQAYAADHGLAFAGEAAALEAAL
FT                   RNATLYLDGEYTYRGERATDIQALEWPRTVATGVPREVVNACCELAARALKSPLWQDVS
FT                   GTTVGAAIEKTVGPITTKYANAAGARNDGQTRYAGVTAMLRRWLSSYGSSVKLVRC"
FT   CDS             270643..270843
FT                   /transl_table=11
FT                   /locus_tag="BB2222"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTK6"
FT                   /protein_id="CAE32719.1"
FT                   /translation="MGNFLRLVLPTPTDAPGLQDCRGIRLYTADGAPIPGLVAVKLEAG
FT                   TDEPIWRATLIMDVNVSGKPD"
FT   CDS             270843..271238
FT                   /transl_table=11
FT                   /locus_tag="BB2223"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Rhizobium loti hypothetical protein
FT                   Mlr8012 SWALL:Q984G8 (EMBL:AP003013) (130 aa) fasta scores:
FT                   E(): 6.8, 26.82% id in 123 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTF8"
FT                   /protein_id="CAE32720.1"
FT                   /translation="MATFDYADMAATAQELLDEFGGPVTVRQIVTGEYDPDLGQASTTT
FT                   VDNDGIGALFDYTAQAAGLANMAGSVIETGDKQMYLAPELAAGGAMPEPKPADLVLALG
FT                   ATWRVVTVKTLAPAGLVLLFELQLRQA"
FT   CDS             271235..271633
FT                   /transl_table=11
FT                   /locus_tag="BB2224"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Weakly similar to Yersinia pestis hypothetical phage
FT                   protein Ypo2114 SWALL:Q8ZEP6 (EMBL:AJ414151) (194 aa) fasta
FT                   scores: E(): 1.8e-08, 36.93% id in 111 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTI9"
FT                   /protein_id="CAE32721.1"
FT                   /translation="MSFTADLGKFVARAKGNVDTATRQATVLLAQGVILKSPVDTGRFR
FT                   ANWQFSAAGVQRGTTMAIDPGGQVTLHRLVAEIRQTAAGGVTYLSNSLPYAVRLENGWS
FT                   KQAPQGMVKLTVQEFQQYVSQAAKDANK"
FT   CDS             271630..272052
FT                   /transl_table=11
FT                   /locus_tag="BB2225"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Yersinia pestis hypothetical phage
FT                   protein Ypo2115 SWALL:Q8ZEP5 (EMBL:AJ414151) (135 aa) fasta
FT                   scores: E(): 5.8e-10, 34.58% id in 133 aa, and to Rhizobium
FT                   loti hypothetical protein Mlr8015 SWALL:Q984G5
FT                   (EMBL:AP003013) (137 aa) fasta scores: E(): 8.8e-06, 33.91%
FT                   id in 115 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTM0"
FT                   /protein_id="