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EBI DbfetchID BX640436; SV 1; linear; genomic DNA; STD; PRO; 255260 BP. XX AC BX640436; XX DT 09-AUG-2003 (Rel. 76, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Bordetella parapertussis strain 12822, complete genome; segment 14/14 XX KW complete genome. XX OS Bordetella parapertussis OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. XX RN [2] RP 1-255260 RA Sebaihia M.; RT ; RL Submitted (06-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: RL ms5@sanger.ac.uk XX RN [3] RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., RA Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., RA Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., RA Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., RA Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., RA Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., RA Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., RA Barrell B.G., Maskell D.J.; RT "Comparative analysis of the genome sequences of Bordetella pertussis, RT Bordetella parapertussis and Bordetella bronchiseptica"; RL Nat. Genet. 35(1):0-0(2003). XX DR EMBL-CON; BX470249. DR RFAM; RF00050; FMN. XX FH Key Location/Qualifiers FH FT source 1..255260 FT /organism="Bordetella parapertussis" FT /strain="12822" FT /mol_type="genomic DNA" FT /db_xref="taxon:519" FT CDS 57..1103 FT /transl_table=11 FT /gene="bhuS" FT /locus_tag="BPP4186" FT /product="putative hemin transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0346" FT /db_xref="GOA:Q7W362" FT /db_xref="InterPro:IPR007845" FT /db_xref="UniProtKB/TrEMBL:Q7W362" FT /protein_id="CAE39465.1" FT /translation="MTEPTFATRAAALRQRNDELAASQPGQRARNLAQALGVSEAEWIA FT AGCNGARVTALRGKPQAIFRDLGELGEVMALTRNDWCVHERHGRYEDIQAEGPVGLVLG FT PDIDLRVFFNCWASAWAVEQDGHTSLQFFDGAGVAVHKVYRTEATDGAAWEALVARYAG FT EPEWPEPQPYPPADDAAAVDDPAALRRDWLAMQDTHEFFPLLRRLKVGRLAALKAAGAD FT LAQQVPAETVERMLTQAAASGLSIMCFVGNRGMIQIHTGPVEKLRRTGPWYNVLDPRFN FT LHLNTETVDSAWVVSKPTSDGWVTSLELYTAGGELIVQFFGERKPGKPELTAWRQLLSG FT LCGQPLAE" FT CDS 1100..1963 FT /transl_table=11 FT /gene="bhuT" FT /locus_tag="BPP4187" FT /product="putative hemin binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0345" FT /db_xref="GOA:Q7W361" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:Q7W361" FT /protein_id="CAE39466.1" FT /translation="MRQAMKRLLAWLLAMACAGAAAQGAPARRVVTLGGTVTEIVYALG FT QGGRLVGDDLSSLYPQAATQLPRIGYYRAVPVEGVLALEPDLVLASEQAGPPDAIERLK FT AVGVRVAVVSDQASVQSLHARIRAIAQALDAVPEGERLAAQLDAELARTEALPASGARA FT LLLMNRTGTPLGAGRDTAADLLLRLSGLANALAGQEGYKPVSAEALGALAPEVIVVTAA FT SLAASGGLEKLRAQPGIAATPAAQRQCIVVMDDLLALGTGPRLPQAIRQLKETPCVAGH FT GTPPAR" FT misc_feature 1100..1165 FT /note="Signal peptide predicted for BPP4187 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.557 between residues 22 and 23" FT misc_feature 1175..1867 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein, FT score 2.1e-39" FT CDS 2007..2951 FT /transl_table=11 FT /gene="bhuU" FT /locus_tag="BPP4188" FT /product="putative hemin permease" FT /note="ortholog of Bordetella pertussis (BX470248) BP0344" FT /db_xref="GOA:Q7W360" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:Q7W360" FT /protein_id="CAE39467.1" FT /translation="MLAVAVLAAASGAVHIPLADLARLIGGDSTPRDALWRNVLFDIRL FT PRVLFAATAGAALAICGAAMQALFRNPLAEPGLVGISAGGAMGAVLAIVLTSGGFAITA FT PAAFAGSLLATGCAYVLGRRAHGVAGLLLAGIAINTVAGSVIGLLTFMASDAQLRDLTF FT WSMGSLAGARWSLLAFLAPWTLLWSWWLMRQWRAMNALLMGEREAHHLGFALRSVRRQL FT VLATALIVGPLVAATGGIGFVGLVVPHLIRMTLGADHRWLLPASMLAGALALTLADWLA FT RVVIVPAELPIGLVTSLVGGPFFLWLLARGRRL" FT misc_feature join(2019..2087,2145..2213,2232..2291,2304..2372, FT 2385..2453,2511..2579,2676..2744,2787..2855,2874..2933) FT /note="9 probable transmembrane helices predicted for FT BPP4188 by TMHMM2.0 at aa 5-27, 47-69, 76-95, 100-122, FT 127-149, 169-191, 224-246, 261-283 and 290-309" FT misc_feature 2040..2936 FT /note="HMMPfam hit to PF01032, FecCD transport family, FT score 9.6e-94" FT CDS 2966..3754 FT /transl_table=11 FT /gene="bhuV" FT /locus_tag="BPP4189" FT /product="putative ATP-binding component of hemin transport FT system" FT /note="ortholog of Bordetella pertussis (BX470248) BP0343" FT /db_xref="GOA:Q7W359" FT /db_xref="HSSP:1II0" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:Q7W359" FT /protein_id="CAE39468.1" FT /translation="MTLQARNLTLARGGAPILTDVSLTLAPGTLVGLLGANGAGKSTLL FT AALAGELAPRSGQVYLGDADLATLNARQLARRRAVLPQKPSLSFDLGVSDVVGMGAYPF FT PELDPAAVRQLVRDALEQASVTHLAQRRYPQLSGGEQQRVQFARVLAQCHAMHAPGQTR FT YLMLDEPISNLDPRHQMELLATARALAHEAGMGVLVIVHDINQAARWCDTLALLADGRL FT AALGPPADVLTPDHMRRVYGIEADVLAHPTLPGRLLVLAR" FT misc_feature 3047..3625 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.6e-45" FT misc_feature 3068..3091 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 3371..3415 FT /note="PS00211 ABC transporters family signature." FT CDS complement(3758..4258) FT /transl_table=11 FT /locus_tag="BPP4190" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0342" FT /db_xref="InterPro:IPR007553" FT /db_xref="UniProtKB/TrEMBL:Q7W358" FT /protein_id="CAE39469.1" FT /translation="MEWVLVSACLLGRPVRYDGRDAATGHPVLARWQAERRVVAVCPEV FT AGGLPTPRPPAEIAAGAGGAAVLDGLAQVREASGVDVSAAFVEGARQALALVRERGIRV FT AVLKEGSPSCGSGYTYDGSFSGARIAREGVTAACLTRVGVRVFSEHELDAAQAWLRQLE FT TGA" FT CDS 4403..5128 FT /transl_table=11 FT /locus_tag="BPP4191" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0341" FT /db_xref="InterPro:IPR018655" FT /db_xref="UniProtKB/TrEMBL:Q7W357" FT /protein_id="CAE39470.1" FT /translation="MDTCPNTVQARIGALDWPALETALDARGAAVAHGLLDARECGELA FT ALYTQPRLFRSRIVMARHGFGRGEYQYFAYPLPPLVAQLRTAFYPPLAAVANRWNAALR FT DPMRYPARHADWLHTCHQAGQARPTPLLLKYGPGDYNCLHQDLYGERVFPLQVAILLSR FT PGRDFDGGEFVMTEQRSGHAARAEVMPLAQGGALVFAVNRRPAQGARGLVQASLRHGVS FT ELRAGQRYNTIGIIFHDAT" FT CDS 5140..5790 FT /transl_table=11 FT /gene="alkB" FT /gene_synonym="aidD" FT /locus_tag="BPP4192" FT /product="alkylated DNA repair protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0340" FT /db_xref="GOA:Q7W356" FT /db_xref="InterPro:IPR005123" FT /db_xref="UniProtKB/TrEMBL:Q7W356" FT /protein_id="CAE39471.1" FT /translation="MQADLFDAEQTGIRTRLGEQAWVLRGFALPWLDALLPALRAVIAQ FT APLRHMATPGGFTMSVALTNCGALGWTTDAHGYRYRPDDPQTGLPWPPMPQAFAQLTRE FT AAAQAGFAGFDPDACLVNRYAPGARMSLHQDKNERDFGAPIVSVSLGLPAMFLFGGARR FT DERPARIPLLHGDVAVWGGVDRLRYHGVMPLAEGQHPLLGRQRINFTLRRAGA" FT misc_feature 5482..5784 FT /note="HMMPfam hit to PF03171, 2OG-Fe(II) oxygenase FT superfamily, score 0.0053" FT CDS 5811..6398 FT /transl_table=11 FT /gene="ogt" FT /locus_tag="BPP4193" FT /product="methylated-DNA--protein-cysteine FT methyltransferase" FT /EC_number="2.1.1.63" FT /note="ortholog of Bordetella pertussis (BX470248) BP0339" FT /db_xref="GOA:Q7W355" FT /db_xref="HSSP:1EH6" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W355" FT /protein_id="CAE39472.1" FT /translation="MRGTRAPHTVKAPSNQERIMHFFQAQLESPLGALSLVTDDRQQVR FT ALEFADSPQRLRRLLHLHYGTCTLREAPAPAAIAAALAHYFSGQCDALDGIATATGGSA FT LQQRVWQALRRIPVGEVTSYGALARQLGHDDRQAARAIGGANAANPIALIVPCHRVIGK FT DGALKGYAWGLERKRWLLAHENAAAGLLREAG" FT misc_feature 6114..6386 FT /note="HMMPfam hit to PF01035, 6-O-methylguanine DNA FT methyltransferase, DNA binding domain, score 5.8e-37" FT misc_feature 6273..6293 FT /note="PS00374 Methylated-DNA--protein-cysteine FT methyltransferase active site." FT CDS 6493..7635 FT /transl_table=11 FT /locus_tag="BPP4194" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0338" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q7W354" FT /protein_id="CAE39473.1" FT /translation="MYRTDRLYSPPAWPVTRWLADPGRNVPDDIRQALLAGLFGTISIF FT VGGVLNSVLVALIIAIRLPQAPFIAWLAFELACCLARAVVLVSARRAAAAGRPTHTDAY FT IVLTVLWACSVGYGTLISVASGDWVAAILACLSAAAMVGGICFRNFSAPRLTALMICVS FT LGPCTTLPWFTGEHSLWIVSVQLPLYLASMTVAAYRFNRMLVATMQAERDSDRLARCDA FT LTGLLNRFGLGFALERAVAATRRDGNEFALLYLDLDGFKSVNDTHGHAAGDRLLRDVAA FT RLTELAPADAAIARIGGDEFVLLVRNCDEACATALDDRIVARICEPYDLGTPRPVRIGG FT SVGIALVPRHGQEMTAILKAADRALYLAKSAGKSRTALAA" FT misc_feature join(6595..6663,6691..6759,6796..6864,6874..6942, FT 6955..7014,7024..7092) FT /note="6 probable transmembrane helices predicted for FT BPP4194 by TMHMM2.0 at aa 35-57, 67-89, 102-124, 128-150, FT 155-174 and 178-200" FT misc_feature 6859..6903 FT /note="PS00211 ABC transporters family signature." FT misc_feature 7132..7617 FT /note="HMMPfam hit to PF00990, GGDEF domain, score 2.1e-44" FT CDS complement(7645..8475) FT /transl_table=11 FT /locus_tag="BPP4195" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0337" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q7W353" FT /protein_id="CAE39474.1" FT /translation="MSMHNKHPMVRRVLGALALTWATAGAAMAQAPYPTAQAAGDALVD FT AIATSDDTALARVLGANYRQVFPAGDHTQAIYRFLAAWADRHDIQSEGDRRAWLAVGLS FT GWTFPVPMARGGQGQWRFDLQAGVAEMRRRTIGRNELAAIDGVRQLAQAQARYAQGPGQ FT GRYASRLVSRPEHRDGLYWPAADQADAPPFGPDALAMGADTPLDQAYAGYRFRVEAAPD FT GKDFRVVAWPAQYRRSGVYTFAADTSGQVLQRDLGGAGAVGMRTDLAGWQPVAQ" FT misc_feature complement(8389..8475) FT /note="Signal peptide predicted for BPP4195 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.981 between residues 29 and 30" FT CDS complement(8472..9785) FT /transl_table=11 FT /locus_tag="BPP4196" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0336" FT /note="Poor database matches. Similar to internal regions FT of Salmonella typhi putative exported protein STY0180 FT SWALL:Q8Z9E7 (EMBL:AL627265) (540 aa) fasta scores: E(): FT 1.7e-24, 40.86% id in 438 aa, and to Escherichia coli FT hypothetical protein YacH SWALL:YACH_ECOLI (SWALL:P36682) FT (617 aa) fasta scores: E(): 3.4e-23, 38.34% id in 446 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W352" FT /protein_id="CAE39475.1" FT /translation="MLRLRYLLVSLLYLGAIWAGSAQAQAKLDNARLDQLLAPVALYPD FT SLLSQVLMAATYPDDVAAAAKWSADHPKDSGDAAVKAAEGQPWDPSVKSLVAFPSVMDL FT MGRQPQWVKSLGDAFLAQPDDVMDSVQRLRTEARKAGTLTSNKQQKVTTTESAGKTVVV FT VEPADPQVVYVPSYNPTVVYGAWPYPAYPPYYYPPPPGSAFATALVGGIGFGLGVAAVD FT AMWGGFDWGHNDVDIDVNRYNNVNINHRIDTSNTRVDWQHNAANRGSAAYADSASRQRF FT DAQRQAGQQRRAQAGQRAGGGSIDAERQRAAQAFEGHTGHAVAGYGGPGHGGERAGAPG FT RDARPSGSRPGQAGAGQRQPGQHNPAHADGMQRQHADQAAARERAEQFNRTPALHDAGD FT GARMRQQTQRGDFAQQRGGFGGRGGMGGGAHHFGHGRR" FT misc_feature complement(9714..9785) FT /note="Signal peptide predicted for BPP4196 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.970 between residues 24 and 25" FT CDS complement(9896..10852) FT /transl_table=11 FT /locus_tag="BPP4197" FT /product="LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0335" FT /note="Similar to Escherichia coli tdc operon FT transcriptional activator TdcA SWALL:TDCA_ECOLI FT (SWALL:P11036) (312 aa) fasta scores: E(): 2.4e-08, 23.81% FT id in 273 aa, and to Pseudomonas aeruginosa probable FT transcriptional regulator PA2206 SWALL:Q9I1R1 FT (EMBL:AE004647) (315 aa) fasta scores: E(): 1.5e-16, 29.56% FT id in 318 aa" FT /db_xref="GOA:Q7W351" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W351" FT /protein_id="CAE39476.1" FT /translation="MYDSAPSDPVPFARLRFRDLQLLREIAAARSLTAVAERRGLTQPA FT LSRTLRDIEAELGAQVFSRERGARLAPTAVGRHILARVDLLMADAGALHSELRAFEEGR FT GAHLRLGVIPFVSNALMQEVLKTLTGEPLRMSVSTFEGATDQLVLALRRQELDIVIGRL FT SADAGADTLAQEGLFSQTASIVMSEALYERRASLTLASLHGHPWVLPPASSPTRMAFVE FT AFVSRNAVAPVARIETTSARLVHSAISSNMASLGLLPLDIGQELERWGGVRCKAFPVPF FT RMPTVGLIVLAERRARAMNRVVRDVLHRCIARVAAYA" FT misc_feature complement(9920..10552) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.9e-16" FT misc_feature complement(10622..10804) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 4.8e-13" FT misc_feature complement(10670..10762) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 10957..11952 FT /transl_table=11 FT /locus_tag="BPP4198" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0334" FT /db_xref="GOA:Q7W350" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W350" FT /protein_id="CAE39477.1" FT /translation="MQHLHRPTRLMGAIAIITTAFALAGVPAQAGAAPSDQPLRIVVPY FT APGGTGDVIARLVAKKLGEQSGQSVVVENKPGAAGSIGASTVARAAADGNTLLLGYTSE FT MVINPIVQKGVSYDVARDFAPVAMAGSTPLLLVANPTVGANSIAELVALAKARPNRLSY FT ASAGPGSPAHIAGALLAREAGIQLLHVPYKGGSQAVTDTVGGVVSIYFSGMPPAVPFVK FT NGKLTALGVTARQPSPALPDVPALAAQDYPRLDLAGWFGFFAPREVPAPVQAALHDRIT FT AALAADDIRQALAVQGVETRPMSAQAFGDFVAAEQKKYARFIDELGIAAE" FT misc_feature 10957..11046 FT /note="Signal peptide predicted for BPP4198 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.606 between residues 30 and 31" FT misc_feature 11116..11940 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 9.1e-92" FT CDS 11965..12849 FT /transl_table=11 FT /locus_tag="BPP4199" FT /product="metallo-beta-lactamase family protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0333" FT /db_xref="GOA:Q7W349" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q7W349" FT /protein_id="CAE39478.1" FT /translation="MNLWLLGTGTPTPSLRRMCSGYLVRVGDEYLVFDHGFGAHHRMLE FT LGVRATQVSHAFFSHHHYDHMGDYPRLLLTRWDQGVGRVDDMDVYGPPPLKLITERLIG FT DDGAFGPDLISRTENQCSIDVYQARGGTGMRARPQPRLHELAADAVVRTPGWTVRVAPV FT NHFAPHLVSYGYRLDADGQSFVYSGDTGPSRALRELAQDCDVLVHMCHYVSGTAPSKTF FT AAFTMGHRELAELAAEANVRNLVISHVTEQFDHPGMRERIVREVGEIYRGNIFFGEDGM FT EIPFAGPRQTRLD" FT misc_feature 12004..12651 FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily, score 0.0029" FT CDS complement(12893..13969) FT /transl_table=11 FT /locus_tag="BPP4200" FT /product="hypothetical protein" FT /note="Poor database matches. Similar to Pseudomonas FT aeruginosa hypothetical protein PA4347 SWALL:Q9HW54 FT (EMBL:AE004851) (384 aa) fasta scores: E(): 0.00047, 29.31% FT id in 307 aa, and to Rhizobium meliloti putative exported FT enzyme, similar to 6-aminohexanoate-dimer hydrolase FT SMB20965 SWALL:Q92UN4 (EMBL:AL603646) (332 aa) fasta FT scores: E(): 0.0066, 25.38% id in 327 aa" FT /db_xref="InterPro:IPR001466" FT /db_xref="UniProtKB/TrEMBL:Q7W348" FT /protein_id="CAE39479.1" FT /translation="MERIAMNPLMQQAIQFANDHETAWDRSVQGNFGVHLDDPPPWNRL FT LGPVHDRGPVSGVVVVDGQTLASWGEPERADLTFSVAKLYLSILAGVAHDRGLLPDVDE FT PVGRRVPGIGFDAGRNARITWRHLLQQTSEWEGERFGVPDQADRYRAVAFGIPPDGRKG FT DARPLQEPGTYWEYNDVRINQLSYALLHLFRRPLPEVFREAVTRPLGASEDWQWVGYDN FT AWVDIDGVRMPSVPGGTHWGGGMSISARDQALIGRMLLDEGRAADGRQVLSPAWIQAMR FT TPCDIAPYYGYLIWLNHERKVFPSVPASSFFGIGAGSSFTWVEPERRMVVIVRWLDAAY FT ADALFGRILAAVDAHRAG" FT CDS complement(13978..15174) FT /transl_table=11 FT /locus_tag="BPP4201" FT /product="serine--glyoxylate aminotransferase" FT /EC_number="2.6.1.45" FT /note="Similar to Hyphomicrobium methylovorum FT serine--glyoxylate aminotransferase SgaA SWALL:SGAA_HYPME FT (SWALL:O08374) (404 aa) fasta scores: E(): 1.1e-62, 45.71% FT id in 385 aa, and to Rhizobium loti probable FT serine-glyoxylate aminotransferase MLR1322 SWALL:Q98KU1 FT (EMBL:AP002997) (396 aa) fasta scores: E(): 1.1e-65, 46.83% FT id in 395 aa" FT /db_xref="GOA:Q7W347" FT /db_xref="HSSP:1H0C" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q7W347" FT /protein_id="CAE39480.1" FT /translation="MFALNPHPSGRHFLQIPGPTNVPDRVLRAIDQPTIDHRGPAFGQL FT GLAVLAGLKHVFRTESPVLIFPASGTGAWEAALVNTLSPGDTVLMAETGHFASLWRRLA FT GRLGLEVDCLESDWRHPADPQAIGARLAQDTQHRIKAVCVVHNETSTGVTSDIAAVRAA FT IDQAGHPALLMVDTISSLGSIDYRYDEWGVDVTVAGSQKGLMLPPGLSFNAIGPRALAA FT AGQARLPRSYWDWREMLAANERGYFPYTPATNLLYGLHEALAMLREEGLPQVYARHRRH FT AHATRLAVAAWELELLCLDPAQCSPALTAVLMPGGHSADAFRQRALERFDISLGQGLGK FT LADRVFRIGHLGYFNDLMLCGTLAGVEMGLAAAGVPHRAGGVQAAMAFLAQTPSGQPA" FT misc_feature complement(14086..15111) FT /note="HMMPfam hit to PF00266, Aminotransferase class-V, FT score 4e-12" FT CDS 15373..16083 FT /transl_table=11 FT /locus_tag="BPP4202" FT /product="putative GntR-family transcriptional regulator" FT /note="Similar to Rhizobium meliloti putative FT transcriptional regulator, GntR family protein SMB20773 FT SWALL:Q92TP2 (EMBL:AL603647) (228 aa) fasta scores: E(): FT 3e-26, 45.68% id in 197 aa, and to Streptomyces coelicolor FT putative transcriptional regulator SCBAC17A6.31c FT SWALL:Q93J99 (EMBL:AL596248) (216 aa) fasta scores: E(): FT 1.6e-14, 38.99% id in 218 aa" FT /db_xref="GOA:Q7W346" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W346" FT /protein_id="CAE39481.1" FT /translation="MSLEVSLPPSASACAEGAAGGGTLPATVAARLRERIIQGDFPPGA FT RLNERALCDQLGVSRTPLREALRALAAEGLVRIEPKRGAQVVALSAADIREAFEVIGGL FT EEMSCRLACARATDQEIAEIRALTYEMMASHARRDLPSYFRANRAIHERIGLAARNALL FT KQLYDAQNARIQNLRYVSNEDRHKWDQAMREHMAMADALQARDAERLADLMRGHLRRKC FT EAALRSLAAASGIR" FT misc_feature 15454..15630 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 3.7e-22" FT misc_feature 15508..15582 FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT CDS complement(16116..16661) FT /transl_table=11 FT /locus_tag="BPP4203" FT /product="putative membrane protein" FT /note="Poor database matches. Similar to Ralstonia FT solanacearum probable transmembrane protein RS03329 FT SWALL:Q8Y2H5 (EMBL:AL646058) (171 aa) fasta scores: E(): FT 0.00014, 30.11% id in 176 aa" FT /db_xref="InterPro:IPR019253" FT /db_xref="UniProtKB/TrEMBL:Q7W345" FT /protein_id="CAE39482.1" FT /translation="MRDTLSHPLLPQAGAQGAAPCRWSLRRSSVAPAQFMAGMGIMAAI FT AVLVGLAGAAYGLWAITAWCVVELAFIALAGWHFARHARDGEDIELRADGTLVVEVHDG FT ERVSRHVFDRGRARVIRHRAWSAADESLWLHCGRRQVRLARYLDRRRTCAFETDIRQAL FT GTGPSRAPRLGAADTLFE" FT misc_feature complement(join(16425..16490,16506..16571)) FT /note="2 probable transmembrane helices predicted for FT BPP4203 by TMHMM2.0 at aa 30-52 and 57-79" FT CDS complement(16689..18284) FT /transl_table=11 FT /gene="ctaD" FT /gene_synonym="coxA" FT /locus_tag="BPP4204" FT /product="cytochrome c oxidase polypeptide I" FT /db_xref="GOA:Q7W344" FT /db_xref="HSSP:1AR1" FT /db_xref="InterPro:IPR014241" FT /db_xref="UniProtKB/TrEMBL:Q7W344" FT /protein_id="CAE39483.1" FT /translation="MSTIVHDHSPSAGHADHHAAPSGWRRWLFATNHKDIGTMYLIFSL FT VMLMVGGVLALAVRTELFEPGLQFFRPELFNQFTTMHGLIMIFGAIMPAFVGFANWMIP FT LQIGASDMAFARMNNFSFWLLPVASVLLLSSFWVDGGATAAGWTLYAPLSLQMGPGMDL FT TIFAVHIMGASSIMGAINIMVTILNMRAPGMTLMRMPLFCWTWLITAFLLLAVMPVLAA FT GITMLLTDRHFGTGFFNAAAGGDPVMYQHVFWFFGHPEVYIMILPAFGIVSAVVPAFSR FT KKLFGYASMVYATASIAVLSFLVWAHHMFTTGIPVVGQLFFMYATMLISIPTGVKVFNW FT VATMWRGSLSFETPMLFAVGFIFVFTVGGFTGLILAVAPIDIQVHDTYYVVAHFHYVLV FT AGSLFALFAGAYYWLPKWTGRMYDEKLGKLHFWSTMISFNVTFFPMHFLGLAGMPRRYA FT DYAAQFTTFHQVATIGAIWFGLSQFIFVWAALRCYRGKGEVATAKPWDGAEGLEWTVPS FT PAPHHTFVTPPEVK" FT misc_feature complement(join(16824..16889,16935..17000,17040..17105, FT 17151..17216,17256..17321,17367..17432,17454..17519, FT 17601..17666,17730..17795,17856..17921,17985..18050, FT 18111..18176)) FT /note="12 probable transmembrane helices predicted for FT BPP4204 by TMHMM2.0 at aa 36-58, 78-100, 121-143, 163-185, FT 206-228, 255-277, 284-306, 321-343, 356-378, 393-415, FT 428-450 and 465-487" FT misc_feature complement(16851..18209) FT /note="HMMPfam hit to PF00115, Cytochrome C and Quinol FT oxidase polypeptide I, score 3.3e-262" FT misc_feature complement(17361..17525) FT /note="PS00077 Heme-copper oxidase catalytic subunit, FT copper B binding region signature." FT CDS 18650..19618 FT /transl_table=11 FT /locus_tag="BPP4205" FT /product="putative lipoprotein" FT /note="Similar to Pseudomonas sp. hypothetical protein FT SWALL:YTCB_PSESQ (SWALL:P27103) (336 aa) fasta scores: E(): FT 1.9e-42, 41.21% id in 313 aa, and to Comamonas acidovorans FT hypothetical protein SWALL:AAL86583 (EMBL:AY078159) (336 FT aa) fasta scores: E(): 2.1e-42, 41.21% id in 313 aa" FT /db_xref="GOA:Q7W343" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W343" FT /protein_id="CAE39484.1" FT /translation="MKKKVCQAAGILALACATAAATAAWPDKPVQVVVPYNPGGGVDTF FT TRPVAAKLGEELGQTVVVDNRPGAGGTIGVQRAATAPPDGYHLLAGGVHQMMAEGLYPN FT RGYDMDRDFVPVALVAKVPNVLVVTNKAPFRNVEELIAYARKNPGKLNYCSSGSGTAQH FT IVAATFSQLAGVSMTHIPYRGTAPAMQDLIGGQCDLMFDGLGTSAPQVRTSNIRLLAVT FT SNARSPAFPDAPTLKEAGGPAMDASIWYAWWAPAGTPADVLARLRAGIAQSLKAPAVLE FT AWRSQGAEVPPAMEPAALQDYVRAENQRWQKAVRELGIKIG" FT misc_feature 18650..18718 FT /note="Signal peptide predicted for BPP4205 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.869 between residues 23 and 24" FT misc_feature 18665..18697 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 18782..19606 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 9.7e-102" FT CDS complement(19634..20578) FT /transl_table=11 FT /locus_tag="BPP4206" FT /product="LysR family regulatory protein" FT /note="Similar to Pseudomonas putida transcriptional FT activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 FT aa) fasta scores: E(): 6.5e-32, 36.98% id in 292 aa, and to FT Pseudomonas aeruginosa probable transcriptional regulator FT PA3321 SWALL:Q9HYS4 (EMBL:AE004754) (304 aa) fasta scores: FT E(): 3e-36, 40.92% id in 303 aa" FT /db_xref="GOA:Q7W342" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W342" FT /protein_id="CAE39485.1" FT /translation="MRAAVNLRSVDLNLLVFFDALMTERHVTRAADRIAVSQPAMSNAL FT SRLRMVFKDELFVRTAKGMEPTPRALELGESVHATLQQAARLMTSDIQFDPSSTQRQFT FT LRMSDLVGTLVLPALMARVDAAAPGLAIDTVHLSPEQTIEALEADRLDLAVSMELQHTS FT AIRAEALFSDRMVCVLRKGHPLAGRRLTLKQFLAYRHVRVSMSPTDIRFVDSVLAGQGL FT RREVALNVTHWLLVPAVLRDTDLLAVMSERAAQRIAGPDTMIRPLPFATPGFQWALYWH FT RRYEHSRAHQWLREQVRAVAPQGQGLSTPGAAG" FT misc_feature complement(19673..20293) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.9e-33" FT misc_feature complement(20366..20545) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1.1e-18" FT misc_feature complement(20411..20503) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 20808..21515 FT /transl_table=11 FT /locus_tag="BPP4207" FT /product="haloacid dehalogenase-like hydrolase" FT /note="Similar to Pseudomonas putida 2-haloalkanoic acid FT dehalogenase H-109 DehH109 SWALL:HAD2_PSEPU (SWALL:Q59728) FT (224 aa) fasta scores: E(): 7.9e-12, 26.63% id in 229 aa, FT and to Xanthobacter autotrophicus 2-haloalkanoic acid FT dehalogenase DhlB SWALL:HAD_XANAU (SWALL:Q60099) (253 aa) FT fasta scores: E(): 1.6e-14, 35.17% id in 199 aa" FT /db_xref="GOA:Q7W341" FT /db_xref="HSSP:1AQ6" FT /db_xref="InterPro:IPR005833" FT /db_xref="UniProtKB/TrEMBL:Q7W341" FT /protein_id="CAE39486.1" FT /translation="MATAETLKQKIKVVMFDQYGTVVDMQKGLVEIAAPYLKEKGWTGN FT PNSFVTWWRRTHFENSMIDALLHQEHTPYREIGHRAVAYTLERAGIAHTAEEVRYLVGC FT IEQLKPFPDVPEALARLQTRYRIVALSNGDRDMLETAKRHHGIPFDNVISVAEANSFKP FT HVATYAKAAEIEGVRMDEVLFVANHAFDCLGAKSAGMHSAFIDRRKRPFGGTPHQPDLW FT VDDMKSLADAMVG" FT misc_feature 20838..21431 FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase, score 1.6e-13" FT CDS 21518..22726 FT /transl_table=11 FT /locus_tag="BPP4208" FT /product="CaiB/BaiF family protein" FT /note="Similar to Rhizobium meliloti putative conserved FT membrane-anchored protein SMB21182 SWALL:Q92V66 FT (EMBL:AL603645) (394 aa) fasta scores: E(): 8.6e-67, 47.39% FT id in 384 aa, and to Thermoplasma volcanium L-carnitine FT dehydratase TV1186 or TVG1215416 SWALL:Q979H5 FT (EMBL:AP000995) (399 aa) fasta scores: E(): 3e-61, 41.08% FT id in 387 aa" FT /db_xref="GOA:Q7W340" FT /db_xref="HSSP:1PQY" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7W340" FT /protein_id="CAE39487.1" FT /translation="MSPLHGIRVLELTRVVSGPFCTMLLGDLGAEVIKIEEPVHGDDSR FT AFGPPFSGGESAYFLSVNRNKRSCAIDLKQPEGKELLRALARASDVVIDNFRPGTMARL FT GLGYDALRAANPRLVSCSITGFGDSGPDAQRPGYDLIIQGESGIMDITGDPAGLPTKIG FT TSIADLITGQFASQAITAALLERASSGQGRHVGIAMLDCMASLLTFNAGIYFTTGASPT FT RRGNAHPTIAPYETFQAADGWLNIGVANDKFWQLFCGVIARPDLADDPRYARAADRVAL FT RAELVPRIAALIAAKPRAYWIAALREAGVPCGDIRSVAEVCEAEQLVSRGMVFDMPHPS FT AGQVRNIASPFRFDGAGTAAHRAPPLLGEHTAAILCEHAGLQPERVADLAARGIIRTHA FT TSN" FT misc_feature 21722..22288 FT /note="HMMPfam hit to PF02515, CAIB/BAIF family, score FT 3.5e-69" FT CDS 22739..23194 FT /transl_table=11 FT /locus_tag="BPP4209" FT /product="hypothetical protein" FT /note="Weakly similar to Caulobacter crescentus FT hypothetical protein CC2103 SWALL:Q9A6J1 (EMBL:AE005883) FT (157 aa) fasta scores: E(): 2.6e-05, 28.98% id in 138 aa, FT and to Sulfolobus solfataricus hypothetical protein SSO2140 FT SWALL:P95914 (EMBL:Y08256) (140 aa) fasta scores: E(): FT 0.0018, 24.62% id in 134 aa" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q7W339" FT /protein_id="CAE39488.1" FT /translation="MDESAALRAFQDALRTQRPEFGQFFLARLLGLDISYPDGQCLIVF FT EPQDFLFNPQGSLHGGIIATVMDISMGHLLNHVQGAGLTLEMKTQYLKAVHQGTVYCRG FT EFLQRGRSVSFLKSTLTDAQGEPLAMATSTWKALSPARAPGVDAAAR" FT misc_feature 22790..23152 FT /note="HMMPfam hit to PF02584, Uncharacterized protein FT PaaI, COG2050, score 2.7e-05" FT CDS complement(23205..24179) FT /transl_table=11 FT /locus_tag="BPP4210" FT /product="putative exported protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT SMA1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: FT E(): 2.2e-34, 36.19% id in 315 aa, and to Agrobacterium FT tumefaciens hypothetical protein AGR_L_312 SWALL:AAL45521 FT (EMBL:AE009401) (329 aa) fasta scores: E(): 3.2e-33, 35.96% FT id in 317 aa" FT /db_xref="GOA:Q7W338" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W338" FT /protein_id="CAE39489.1" FT /translation="MRPIAAAFVLGLLAFHGAGAAAGDGWPARKALTMVLPAGAGGSSD FT PLARLLALEMGQRLGQTIVVQNRPGAGGNVGMAQAARAQPDGYTMVISWTGPLATNLAL FT YKDVGYDPRADFAPVGMVGCTPNVLAVSGDFPANSLAEFEAYAKTRKSKLSYGTTGVGS FT SWHIAGEMLSREMDNGLVHIPYQTPGAALTDMKAGRLDAIFPVVPMTVGHVRAGDMKVL FT AVFSKERASVLPDAPATVEQGRADLISDTCFALLAPKGVDAAALAAMNKTLNEVLQDPG FT ARPKIEAMGIQIRAGEPAALAQYLDSEIPRQARLVQASGATAQ" FT misc_feature complement(23217..24041) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1e-67" FT misc_feature complement(24120..24179) FT /note="Signal peptide predicted for BPP4210 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.522 between residues 20 and 21" FT CDS complement(24219..25967) FT /transl_table=11 FT /locus_tag="BPP4211" FT /product="hypothetical protein" FT /note="No significant database matches to the full length FT CDS. C-terminus is similar to the N-terminal regions of FT Pseudomonas aeruginosa hypothetical protein PA2886 FT SWALL:Q9HZW1 (EMBL:AE004714) (600 aa) fasta scores: E(): FT 6.4e-39, 34.34% id in 460 aa, and Mycobacterium FT tuberculosis hypothetical protein Rv0976c SWALL:O86320 FT (EMBL:Z79700) (560 aa) fasta scores: E(): 2.5e-18, 33.81% FT id in 349 aa" FT /db_xref="InterPro:IPR010839" FT /db_xref="UniProtKB/TrEMBL:Q7W337" FT /protein_id="CAE39490.1" FT /translation="MSGYQTMALREVAHSRSGEKGNSSMVSVIAYDPADYELLREQVTV FT ERVRELYGPIVKGGIARYEVPRIGVLNFVMDEVLEGGRSRTLAFEESGKALSSLMLSLP FT VRVPDGYVGRAARNQDSPPAPGAGARGGRSVRLGSATAWSRDRFEPALDLVERGKVDYL FT CFETMSEVTMSAAQVARLDADSTAAYDPYLVARLEPVLAACKAKGIRIISNQGWLDPRG FT AARRIKELAAQLGIADLKVAAVSGGELSGRIADLGLRYSEDGEPVERSRDRIVSAEAYL FT GCEGIVRALADGADVVLTTRVADACLYLGPLAFEFGWSLDDHEQMARGMVIGHLMECGA FT QLSGGYFADPGYKEVPGLERLGNPIAEVSEQAITLSKLPGSGGLLTPATCKEQLLYEVA FT DPSRYLAPDCVTNLGAVDFVQTAPDEVAVLIHGEAGQPRPPTLKALVGLREGYMTEEMV FT IFAGPGALRRARMTQDILERRFQAIGLDAQELRFDYLGMNAVHREATPAPACEPYEVIL FT RVALKTRERQEAEKLRKEIDPLAVNGVSGTGKWATSASGSRVRSVIGLNSCLVPRELVD FT MQVTLY" FT CDS complement(25975..27030) FT /transl_table=11 FT /locus_tag="BPP4212" FT /product="putative exported protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT SMA1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: FT E(): 3e-44, 41.76% id in 328 aa, and to Agrobacterium FT tumefaciens hypothetical protein AGR_L_312 SWALL:AAL45521 FT (EMBL:AE009401) (329 aa) fasta scores: E(): 1.6e-38, 37.46% FT id in 331 aa. Possible alternative translational start FT site" FT /db_xref="GOA:Q7W336" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W336" FT /protein_id="CAE39491.1" FT /translation="MTSRDGACRPQVVSTRALKGGLSLARRRVARACLLATAGLLAWPA FT AQAAGPAGAYPAKPVTIIVPYGAGSSTDILTRVLAKHVSAQLGQPVIVENKAGAGGAVG FT SAQVAHAAPDGYQLVMGTISSHSINQSMMKNLPYDVLRDFAPISLVAYFPNLLAVNRDL FT PVSNLADVVKLAKQRGGLNFATGGIGSSGQMGGELLKLRTGAPLNHVPYKEVGQAVADT FT VAGHVPLLFYQVPALVSQIQGGQLKAVAVLAPERTSLLPDVPTSTEQGITDFDATAWMG FT LFAPAGTPAPVVERLNAAVAAAARDPALQKQLAPQGFTMVGNSSEEFRAFVRKDIDKWA FT EVVKATGASIQ" FT misc_feature complement(25987..26808) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 4.5e-100" FT misc_feature complement(26887..27030) FT /note="Signal peptide predicted for BPP4212 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.926) with cleavage site FT probability 0.835 between residues 48 and 49" FT CDS 27094..28137 FT /transl_table=11 FT /locus_tag="BPP4213" FT /product="LysR family regulatory protein" FT /note="Similar to Chromatium vinosum rubisco operon FT transcriptional regulator RbcR SWALL:RBCR_CHRVI FT (SWALL:P25544) (302 aa) fasta scores: E(): 5.6e-18, 31.33% FT id in 300 aa, and to Synechococcus sp. CbbR homologue CmpR FT SWALL:Q9F1R2 (EMBL:AB047379) (323 aa) fasta scores: E(): FT 5.8e-19, 29.04% id in 303 aa" FT /db_xref="GOA:Q7W335" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W335" FT /protein_id="CAE39492.1" FT /translation="MPTNGIFATTDNRRRSVDESWLGVLRRINLNQLASFAAVADRGSF FT RAAAAQLHISQSTLSVQVQQLEAALGVKLLHRDTRTVRLTDEGRRLEQVFSLSGRELAR FT VLAQLRDEGRLQKGAIVLAVLPSLAATFLPPLMRAFQTRFPGIRIRMHDADSRRAHEQI FT QQGAVDIAVTSRSPRNVEVGFQPLFEEPLLAVVPAADALFRRRASASLELLARRPLLLN FT PRGVDLRERLETLFRAAGIAAAPAQELTGTASLVALAASGMGVSIQPRSSLYGLDLGAC FT RLLPLRPAALREIGVITPPGRTPSPATAAFHDYLVEHAASVAWPLLGVPGPHAGTDTVL FT TVNRSGV" FT misc_feature 27181..27360 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2e-25" FT misc_feature 27223..27315 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 27430..28053 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 6.2e-46" FT CDS complement(28273..30105) FT /transl_table=11 FT /gene="glmS" FT /locus_tag="BPP4214" FT /product="glucosamine--fructose-6-phosphate FT aminotransferase [isomerizing]" FT /EC_number="2.6.1.16" FT /note="ortholog of Bordetella pertussis (BX470248) BP0666" FT /db_xref="GOA:Q7W334" FT /db_xref="HSSP:1JXA" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/Swiss-Prot:Q7W334" FT /protein_id="CAE39493.1" FT /translation="MCGIVGAVAQRDITPILIEGLKRLEYRGYDSCGVALYMDGHLRRT FT RSTKRVAELSEQVAEDKLGGFTGIAHTRWATHGIPATYNAHPHFSAQGKDEPRIALVHN FT GIIENHEELRQELQGVGYVFESQTDTEVIAHLVNHLYAGDLFEAVQQAVRRLQGAYAIA FT VFCRDEPHRVVGARQGSPLVVGLGQNENFLASDALALAGTTDQIIYLEDGDVVDLQLAR FT VWIVDQAGKQVERKAHTVQVHTGAAELGPYRHFMQKEIFEQPRAVGDTLQDIESITPEL FT FGDGAYKVFKEIDSLLILACGTSYYAGLTAKYWIESIARIPVAVEIASEYRYRDSVPNP FT NALVVTISQSGETADTLAALKHARSLGMQHTLTVCNVATSAMVRECELAYITRAGVEIG FT VASTKAFTTQLTALFLLTLALAQTRGRLTEEQEAEHLKALRHLPAAIGAVLALEPQIMA FT WADRFASKENALFLGRGMHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTEHMP FT VVTIAPKDALLEKLKSNMQEVRARGGELYVFADADSKIANAEGMHVIRMPEYYGALSPI FT VHTIPLQLLSYHTACVRGTDVDKPRNLAKSVTVE" FT misc_feature complement(28318..28728) FT /note="HMMPfam hit to PF01380, SIS domain, score 8.8e-34" FT misc_feature complement(28840..29247) FT /note="HMMPfam hit to PF01380, SIS domain, score 6.2e-35" FT misc_feature complement(29551..30102) FT /note="HMMPfam hit to PF00310, Glutamine amidotransferases FT class-II, score 1.2e-76" FT misc_feature complement(30088..30105) FT /note="PS00443 Glutamine amidotransferases class-II active FT site." FT CDS 30255..30743 FT /transl_table=11 FT /locus_tag="BPP4215" FT /product="AsnC-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0667" FT /db_xref="GOA:Q7W333" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q7W333" FT /protein_id="CAE39494.1" FT /translation="MQNTPNPSVPLDDLDRRILDQMQRDCALTNQELAARVHASPPTCL FT RRVRRLVDEGVIEKQVAIVAPAKVGSTLTAIVEITLDVQAAERLAEFEASLLDEPAVLQ FT CYRVSPGPDFVVIVQVADMPAYHALAHRVFTAQANVRNVRTFFSVHRAKFETRIGIGG" FT misc_feature 30357..30668 FT /note="HMMPfam hit to PF01037, AsnC family, score 2.4e-31" FT CDS complement(30765..31982) FT /transl_table=11 FT /locus_tag="BPP4216" FT /product="probable thiolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0668" FT /db_xref="GOA:Q7W332" FT /db_xref="HSSP:1AFW" FT /db_xref="InterPro:IPR002155" FT /db_xref="UniProtKB/TrEMBL:Q7W332" FT /protein_id="CAE39495.1" FT /translation="MTGTFSTGDSKMLDAVIVSTARTPIGKARRGALNLTHGADLGAHA FT IRHAVLRAGLEAGEVEDVILGCGYPEGGTGRNVARLSALRAGMPVTVSGMTVQRACSSG FT LQAIAIAAGRIRTEGVPAIVAGGVESVSLVLDHINRSSHRNEWLSAHLPGIDMTMIETA FT DLVAQRYGITREAQDEYALRSQRLTAAAQEAGRFEHEIAPIRTTMRTIDPATGEAVLRQ FT VECARDEGARPDTSLDNLARLAPVRGDGQFVTAGNASQLSDGAAACVLMSGREAARRGL FT EPLGVFRGFATAGCEPQEMGIGPVLAVPRLLERHGLTVDDIDLWELNEAFACQVLYCRD FT RLGIPDARLNVDGGAISIGHPFGMSGARMVGHALIEGRRRGARYVVVTMCVGGGMGAAG FT LLEVQQ" FT misc_feature complement(30774..31148) FT /note="HMMPfam hit to PF02803, Thiolase, C-terminal domain, FT score 3e-58" FT misc_feature complement(30885..30935) FT /note="PS00737 Thiolases signature 2." FT misc_feature complement(31161..31949) FT /note="HMMPfam hit to PF00108, Thiolase, N-terminal domain, FT score 1.9e-69" FT CDS complement(31979..34096) FT /transl_table=11 FT /locus_tag="BPP4217" FT /product="probable enoyl-CoA hydratase/3-hydroxyacyl-CoA FT dehydrogenase, bifunctional enzyme" FT /EC_number="4.2.1.17" FT /note="ortholog of Bordetella pertussis (BX470248) BP0669" FT /db_xref="GOA:Q7W331" FT /db_xref="HSSP:1EY3" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W331" FT /protein_id="CAE39496.1" FT /translation="MTNPDFEHIKPVVSVARHRNVAVLSVDNPPVNALSDTVRAGLCSA FT LREAEADPAVRAVVLACEGNTFVAGADIREFARAKGAAEAIDVPAVIESCRKPVVAALH FT GQALGGGLELALACHGRVALAGCRLGLPEITLGLIPGGGGTQRLPRLIGLEAAAELILS FT GATIDAETARESGLLDAVWPDRLRERAIEFAASLADSSAGVRRASTLAHPPMSPQTGQD FT LRKIAESRPAALRAPQAGAPAVEALSAAAQPDFARGRALERELFARLRDGEESRALRAL FT FFAERSARRVGLDDATSAPPMAHDAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLD FT RALEAIRAHYRSLAARGRMTEAAARDAVARISPASDMQAAAEADVVVEAAFEDLAIKQA FT IFRQLDSIVRPGAVLATNTSTLDVDAIAAATRRPQDVVGTHFFSLANVMRLLEVVRGAR FT TAPRTLGAVLALGRRMGKVCVTVGVCDGFVANRMSAHRARQIELLLQHGALPQDIDQAA FT REFGFSMGPCAATDLAGLDISWRIRRGKGARSPIADALCELGRFGQKVGRGYFSYAPGS FT RVAVPDPEVEALIRRMAEQLGIRRQSFDLATITDRLILPVINEGARVLQDGVARRASDI FT DLIWVHGFGWPARRGGPMFHAERVGLASVCDRLARLADALEDASLQPAPLLRDLATRGA FT GFASLHAARQA" FT misc_feature complement(32000..32275) FT /note="HMMPfam hit to PF00725, 3-hydroxyacyl-CoA FT dehydrogenase, C-terminal domain, score 0.0064" FT misc_feature complement(32381..32641) FT /note="HMMPfam hit to PF00725, 3-hydroxyacyl-CoA FT dehydrogenase, C-terminal domain, score 5.3e-19" FT misc_feature complement(32645..33199) FT /note="HMMPfam hit to PF02737, 3-hydroxyacyl-CoA FT dehydrogenase, NAD binding domain, score 4e-71" FT misc_feature complement(33548..34033) FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family, score 2.8e-48" FT CDS join(34354..34848,34850..36157) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP4218" FT /product="probable acyl-CoA dehydrogenase (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP0670" FT /db_xref="PSEUDO:CAE39497.1" FT misc_feature 34934..35242 FT /note="HMMPfam hit to PF02770, Acyl-CoA dehydrogenase, FT middle domain, score 2.4e-08" FT misc_feature 35252..35728 FT /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, FT C-terminal domain, score 2.3e-31" FT misc_feature 35597..35656 FT /note="PS00073 Acyl-CoA dehydrogenases signature 2." FT CDS 36239..37225 FT /transl_table=11 FT /locus_tag="BPP4219" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0671" FT /db_xref="GOA:Q7W330" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W330" FT /protein_id="CAE39498.1" FT /translation="MQKKRRALLSLLGASAFPALAGQAFGQGPAWPTRHLRFISGGAAG FT GTSDIVARNLQEPLQSKFGQSVVIENMPGVGGLIGAGNAARATDGHTFFVSNLASNVLS FT VLLYEKVPFDWHTDLPGVARCCTLPNGLFVRSDTGITSAQQLFDTLRKDPEKRVFSSAA FT IGTTSHLSCVMLGQRLGIDLLHIPFKGAAGNMLGLLQGDVFFTIENIPTFAALVKEGRL FT RLLAVSTAERSPNFPDVPTIQESGIENFDVFSWFGISAARSTPRAAIDAVAAEILGQLA FT EPAMQTRFENLGMTVAGLGPDAYDKFIASEMADWGATVKAAGLKPAK" FT misc_feature 36239..36301 FT /note="Signal peptide predicted for BPP4219 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.773 between residues 21 and 22" FT misc_feature 36257..36316 FT /note="1 probable transmembrane helix predicted for BPP4219 FT by TMHMM2.0 at aa 7-26" FT misc_feature 36389..37210 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 8.1e-64" FT CDS 37277..39466 FT /transl_table=11 FT /locus_tag="BPP4220" FT /product="acetyl-CoA synthetase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0672" FT /db_xref="GOA:Q7W329" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W329" FT /protein_id="CAE39499.1" FT /translation="MPTPSQSRRPGSGHTLTALFEPRSVAVVGASDDPSKIGGRPLHLL FT KAARFALPIYPVNPARSVVQGLDAYARITETPTRPDLAIVAVPAAHVLATFDDVVAAGA FT RAAIVYTSGFAEIGAEGVKVQAELTARARASGVRVLGPNCLGVINTRSKLIATFSGAVG FT HAPPRPGSIGLASQSGALGAHCLVLAERRGIAFSVWATSGNESDIDVAELIAYMATDPG FT THVIVACIEGVRDAGRLIEALELARTHGKQIVMMKVGSSPIGAAAAASHTASMVGSDQV FT FDAVLREFGVYRAHSIEDMFDVAYALTVHQSPRGRSLAVVTTSGGVGVLLADEAERLGV FT DMPELPAIAQARIRELLPYAGTRNPVDVTAQITNTPEILGPMLDALLASGTVGSLLLFL FT SHLGLNAAMMRRLMPALTALSKRPDPQVRVACLLACDEVRQELEALGFSVFEDPTRAIR FT TVAALMEIAAAQAQARPARTLPRLPDTAHAVTPGMQYSETEAKRLVRSIGIQTLPERIA FT QDPAQAAAIATELGFPVALKIVSPEILHKSDVGGVQLAVQTADEARSVYTSMMARVRRN FT CPQARIDGIAIAPMARPGVDLILGCIQDPTFGPCLMLGSDGVYTEILADAVIRRAPFDA FT ATARSMIAQLKGAPLLDGARGMPRADTDALAQAVALLSVYAHANRRHIESLEINPLRVL FT PAGQGVVALDALATTVRHPTEPGEATVCPAQEAHS" FT misc_feature 37331..37663 FT /note="HMMPfam hit to PF02629, CoA binding domain, score FT 9.7e-09" FT CDS 39463..40260 FT /transl_table=11 FT /locus_tag="BPP4221" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0673" FT /db_xref="GOA:Q7W328" FT /db_xref="InterPro:IPR002020" FT /db_xref="UniProtKB/TrEMBL:Q7W328" FT /protein_id="CAE39500.1" FT /translation="MNDMHHFTTAISKIVSTPQEEETIIRGHRLSDLIREQPFVASAFL FT LLTGRLPDAGEARTLDAVLTACVDHGVTPAAAIGRTFASYGAPIAQAMVGAALLYGDVA FT GGVGDPLAAMMKQAIADAGARNGAPGEHDVDAAAGNLVAAALRAGGRMPGFGNPPHARD FT PRPRVLLEVARRAGTAGIHCELLLAAERHLAAAKGRDIPINIDGIVAALALDLGLPDGC FT AAALVMIARKFSVLTHYLEEKGQNTKWRHVPQECVHYTGPMPS" FT CDS 40257..41093 FT /transl_table=11 FT /locus_tag="BPP4222" FT /product="probable transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0674" FT /db_xref="GOA:Q7W327" FT /db_xref="InterPro:IPR005471" FT /db_xref="UniProtKB/TrEMBL:Q7W327" FT /protein_id="CAE39501.1" FT /translation="MIGALRHACPGSRAAAFVLSGLQTMTNEVKSAVRVIQILEYFDTV FT RREAGVLEISRALGFPASSTAGILRSLQRLSYLVQDEQRLYRPTPRVTLLGSWIDPLLA FT HDGPLMALMSHLSKATGETIILALQVDAGARYIHIIPSTQRVRLHVNVGDVRPLLTSGT FT GRLFVSTMEPDQVRRAVFRHNALRGANEPEINLSTVTRDATQIRKNGYATSLDRLVPGV FT GIIAALLPEREGTRPMAVAVGGPSVTIRARTAELASLLREGIGQYLPHLGNAGDQS" FT misc_feature 40512..41057 FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator, score 0.00026" FT CDS 41113..43488 FT /transl_table=11 FT /locus_tag="BPP4223" FT /product="probable molybdopterin oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0675" FT /db_xref="GOA:Q7W326" FT /db_xref="HSSP:1EU1" FT /db_xref="InterPro:IPR006657" FT /db_xref="UniProtKB/TrEMBL:Q7W326" FT /protein_id="CAE39502.1" FT /translation="MKERDTNAARPDGEPPVQWRRHSSHWGVFDAAHTGDRLKVRPFAG FT DPDPNRLIENLPDAIRHGVRVPEPMVRLGWLRDGPGPDTRRGSDDYVPMSWDEILDRLA FT RELRRVVDHHGTAGVFGGSYGWSSAGRFHHAQSQLHRFLNVALGGYVRSVHSYSSGAAQ FT VVLPHVVGGFDEVTLCNVSWEQITRHTDVVLAFGGMALKNSRVAAGGVSRHIERQAMAQ FT AAGRGCRFYTIGPQRDDLPTEAAATWLPVVPGTDVALMLGIAHTLVAAGLHDRDFVVDF FT CDGWPVFEDYLLGRADGLAKNAAWAAALCGIDAAAITELALGLAGKRVLVTVAHSLQRA FT DHGEQPVWMGLVLAALLGQVGLEGGGYSYALGSISKYGRRKNAVSIAALPQGANHEKRF FT IPCARIADMLLSPGETFPYNGRTLRYPHIRLAYWAGGNPFHHHQDLGRLAQAFQRLDTF FT VVHEIGWTATARHADIVLPCTMTLERDDIGASPTDDLMVAMQQVVPPYADARNDYDIFS FT DLAQRMGCGAAMTEGRSASDWLQWIYAATREQLAAKGLDAPSFDAFWEKGELRLPQRPD FT DGGAQRAFRLDPAAHPLPTPSGRIQIASAQIAAFGYDDCPGHPAWLPPADPVSAAYPLY FT LVANQPANKLHSQFDYGGYSQASKREGREVCTLHPALARAREIGEGDIVRIYSPRGSCL FT AAATLSTDIREDVVRLPTGAWYDPEQDERGLPMCVHGNPNAVTRDAGTSSLAQGCSGQL FT TAVQIEKYLGPLRDVRAYCPPAIATRPGPPGPLAPPAG" FT misc_feature 41146..42927 FT /note="HMMPfam hit to PF00384, Molybdopterin FT oxidoreductase, score 2.5e-102" FT misc_feature 43012..43377 FT /note="HMMPfam hit to PF01568, Molydopterin dinucleotide FT binding domain, score 1e-27" FT CDS complement(43485..44366) FT /transl_table=11 FT /locus_tag="BPP4224" FT /product="putative membrane protein" FT /note="Similar to Rhizobium meliloti hypothetical FT transmembrane protein SMC00706 SWALL:Q92MF6 (EMBL:AL591791) FT (295 aa) fasta scores: E(): 1.6e-39, 45.74% id in 282 aa, FT and to Rhizobium loti hypothetical protein MLL3550 FT SWALL:Q98FZ9 (EMBL:AP003002) (304 aa) fasta scores: E(): FT 1e-38, 46.73% id in 276 aa" FT /db_xref="GOA:Q7W325" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W325" FT /protein_id="CAE39503.1" FT /translation="MHVSALPGAQPARHAANGAGVAAILLWASLALMTATAQGLPPFQL FT LAASFGVAFALSAVLLTARRAWGRLRAPAGAWLLAVGGIFGYHALYFYALGNAPVAEAS FT LIAYLWPLLIVLFALRGAGGARRWRALAGAALGFAGTALLVWQRAGGPPGADAGADGYL FT AALGCAFVWSGYSALNRRYADVPSDMIGGVCGVVALAGGLCHLAFEQTVAPSVAQWWAI FT LGLGIGPVGLAFFAWDYATKRGSLPLLGALSYLAPLVSTLLLIATGAAAAGWGPVLAAL FT AIIGGAWLATRR" FT misc_feature complement(43491..43859) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 0.00042" FT misc_feature complement(join(43497..43553,43569..43634,43656..43712, FT 43743..43799,43839..43895,43926..43976,43998..44048, FT 44079..44144,44166..44231,44262..44327)) FT /note="10 probable transmembrane helices predicted for FT BPP4224 by TMHMM2.0 at aa 13-35, 45-67, 74-96, 106-123, FT 130-147, 157-176, 189-208, 218-237, 244-266 and 271-290" FT misc_feature complement(43929..44294) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 3e-08" FT CDS complement(join(44465..44767,44766..45173)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP4225" FT /product="AraC-family transcriptional regulator FT (pseudogene)" FT /note="Similar to Agrobacterium tumefaciens AraC family FT transcriptional regulator AGR_C_2651 SWALL:AAL42444 FT (EMBL:AE009104) (244 aa) fasta scores: E(): 5e-11, 31.34% FT id in 252 aa, and to Ralstonia solanacearum probable FT transcription regulator protein RS00666 SWALL:Q8Y2U8 FT (EMBL:AL646058) (248 aa) fasta scores: E(): 1.3e-09, 39.27% FT id in 247 aa. Contains a frameshift after codon 136" FT /db_xref="PSEUDO:CAE39504.1" FT misc_feature complement(44480..44611) FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family, score 1.6e-08" FT misc_feature complement(44495..44623) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature complement(44630..44761) FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family, score 0.011" FT misc_feature complement(44669..44725) FT /note="PS00356 Bacterial regulatory proteins, lacI family FT signature." FT CDS complement(45195..46256) FT /transl_table=11 FT /locus_tag="BPP4226" FT /product="putative glycosyl transferases" FT /note="ortholog of Bordetella pertussis (BX470248) BP3727" FT /db_xref="GOA:Q7W324" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q7W324" FT /protein_id="CAE39505.1" FT /translation="MRILQLNFEKGWRGGERQTLYCMRAFRKAGHDVELLCRAGGPLQA FT RAAEEGFVTHGRRNVPGQLGFLASAGASYDIIHAQTANTVTWAVLTKALHRRPVAFSRR FT TSFVVEPGEEWKTGFKWRRIDLFVAISEMAAGEPRRLGIEPVIIRSAVEPHVIDPANVE FT RLAREFALQGKKVLATSAALIHDKDPLTLVRAVGELARQRQDFVFLHFGAGGDREAQAR FT AEAQALGLDGVYVFAGFRKGVEDFYSIMDVFVMSSLEEALGSSVLDAFLQRVPVVSTDA FT GGLKESLADGRGVLCAVGDHHALAAGMARCLDDAAFRADVTQRAYDYVRTEHDVTEMGR FT RYLARFEQLLARR" FT misc_feature complement(45273..45776) FT /note="HMMPfam hit to PF00534, Glycosyl transferases group FT 1, score 2.1e-26" FT CDS complement(46253..47575) FT /transl_table=11 FT /gene="rkpK" FT /locus_tag="BPP4227" FT /product="putative UDP-glucose 6-dehydrogenase" FT /EC_number="1.1.1.22" FT /note="ortholog of Bordetella pertussis (BX470248) BP3728" FT /db_xref="GOA:Q7W323" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W323" FT /protein_id="CAE39506.1" FT /translation="MKITVVGTGYVGLVSGACLADMGNEVLCLDTDAAKVAMLREGHIP FT IYEPGLEDLVKRNVAGGRLQFTDDIAASVAFGDVQFIAVGTPPGEDGSADLQYVLAAAR FT SIARHMTTRKVVVDKSTVPVGTADKVRAAMQEVLAERGVEVPFSVASNPEFLKEGAAIN FT DFMSPDRIIVGADDEHTIDTMRRIYAPFQRTHERVMVMDVRSAELTKYAANAMLATRIS FT FMNEMANLAEALGADIEQVRRGIGADPRIGYHFLYPGIGYGGSCFPKDVQALMRSAGEH FT ALPMRVIEAAETANQAQKLRLAHKVVARYGADLQGRTFALWGLAFKPNTDDMREAPSLS FT TIADLTRRGARIRAYDPVAMPQAAKVLDDNPAVELVDDMYQALDGADGLLITTEWKVFR FT APDLTRVKQMLKAPLIIDGRNLYVPADMRAQGFDYQGIGRA" FT misc_feature complement(46304..46618) FT /note="HMMPfam hit to PF03720, UDP-glucose/GDP-mannose FT dehydrogenase family, UDP binding domain, score 2.1e-26" FT misc_feature complement(46682..46969) FT /note="HMMPfam hit to PF00984, UDP-glucose/GDP-mannose FT dehydrogenase family, central domain, score 3e-48" FT misc_feature complement(46997..47575) FT /note="HMMPfam hit to PF03721, UDP-glucose/GDP-mannose FT dehydrogenase family, NAD binding domain, score 3.9e-90" FT misc_feature complement(47516..47575) FT /note="Signal peptide predicted for BPP4227 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.916) with cleavage site FT probability 0.892 between residues 20 and 21" FT misc_feature complement(47522..47554) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(47687..49072) FT /transl_table=11 FT /locus_tag="BPP4228" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3729" FT /db_xref="GOA:Q7W322" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7W322" FT /protein_id="CAE39507.1" FT /translation="MIGEDASAARCGSRNSPPDGLPTPRRYWAAATVLTGMSLAVLDAT FT IANVALPTIARDLNAAPSDAVWVINAYNVAVVVMLLPMSALAERVGFRRMFTFGLLLFT FT LSSLACVFAGQLWHLTLARVCQGVGAATLMCMFGGLVRNIYPLRMLGRGISINATTVAV FT MSVLGPTLGSLILSVASWRWIFAVNLSIGIVIMCGLRFLPEVPRNKMPLDWLSALLAML FT TLGIFISGVDLLGHDVLRGIGMIAVAVAIGWLLVRRASGQTAPLVPVDLLRIQAVAYAV FT AASACTFAAQMASYVALPFYFQQVLERPYLQIGLLMAAWPVGTAVVAPVAGRLSDRYAA FT STLSGAGAGIMALGMACLTLLPTTVSNPWIMAGMFLTGLGFGLFQTPNNRAMLSSAPRQ FT RSGAAGGVQATTRVFGQSFGTALVAIAFSVYPQHGPTLALALGTVCASLGVVVNVVRRR FT AEA" FT misc_feature complement(47693..48991) FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter, score 0.01" FT misc_feature complement(join(47708..47764,47780..47845,47909..47965, FT 47978..48043,48080..48145,48176..48241,48305..48358, FT 48374..48430,48467..48532,48545..48610,48650..48715, FT 48728..48784,48812..48877,48908..48973)) FT /note="14 probable transmembrane helices predicted for FT BPP4228 by TMHMM2.0 at aa 33-55, 65-87, 96-115, 119-141, FT 154-176, 180-202, 214-233, 238-256, 277-299, 309-331, FT 343-365, 369-388, 409-431 and 436-455" FT CDS complement(49069..50442) FT /transl_table=11 FT /gene="glmU" FT /locus_tag="BPP4229" FT /product="UDP-N-acetylglucosamine synthesis bifunctional FT protein" FT /EC_number="2.7.7.23" FT /note="ortholog of Bordetella pertussis (BX470248) BP3730" FT /db_xref="GOA:Q7W321" FT /db_xref="HSSP:1HV9" FT /db_xref="InterPro:IPR005882" FT /db_xref="UniProtKB/Swiss-Prot:Q7W321" FT /protein_id="CAE39508.1" FT /translation="MLNVVILAAGLGKRMQSDLPKVLHTLAGRPMLDHVIGSARQLQPA FT RIIVVVGHGADRVKAAFEGLPGLQFALQQPQHGTGHAVQQAVPQLLEGDGEDDVTLVLY FT GDVPLVQPATLQNLLQARGRGVAVLTEVLADSTGYGRIVRDAQGQVCRIVEHKDASEAE FT RAIKEVNTGILAAPTARLKDWLGRITNDNAQGEYYLTDVIGLAVGDGVPVGAAQPGASW FT ETLGVNSRVQQAQLERAWQSELARRQLEAGVTLADPARFDVRGTLSCGRDVFIDVGCVF FT EGTVTLGDGVRVGPHCVLRDVAVQAGARIEAYSHLQQAKVGQEAVVGPYARLRPGADLG FT ERSHVGNFVEIKNSVLQADSKANHLAYIGDADIGARVNVGAGTITCNYDGVNKHRTVIE FT DDAFIGSDTQLVAPVRVGKGATLGAGTTLTKDAPAGQLTISRARQSTIEGWKRPVKKS" FT misc_feature complement(49153..49206) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 51" FT misc_feature complement(49207..49260) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 1.5e+02" FT misc_feature complement(49378..49464) FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature." FT misc_feature complement(49384..49437) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 2.6e+02" FT misc_feature complement(49438..49491) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 1.1e+02" FT misc_feature complement(49540..49593) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 0.59" FT misc_feature complement(49741..50436) FT /note="HMMPfam hit to PF00483, Nucleotidyl transferase, FT score 2e-06" FT CDS complement(50517..51230) FT /transl_table=11 FT /locus_tag="BPP4230" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3731" FT /db_xref="UniProtKB/TrEMBL:Q7W320" FT /protein_id="CAE39509.1" FT /translation="MSDSHTNPFVLPGMGQNSDLSGNPLLASMEMMRQAWAGLAGPGGL FT TQALPMAVPMNLEDLDRRINELRSVENWLRLNLSMLSSSIQGLEVQRATIATLRSFVDS FT VSSVGADEAAGGASPLEVALGLKPAPQGGGAPTGQAGGQAAAPAAEAGAVPPSINAAAQ FT SASQAWWDLMQQQFNNLAAATAASMQAPAGETPPPGAADAPPAAAGKPKAARKSAAKPR FT APRKRAPAKGAADKP" FT CDS complement(51446..52090) FT /transl_table=11 FT /locus_tag="BPP4231" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3732" FT /db_xref="GOA:Q7W319" FT /db_xref="InterPro:IPR008816" FT /db_xref="UniProtKB/TrEMBL:Q7W319" FT /protein_id="CAE39510.1" FT /translation="MNRPSESAPRRRLHPLLGAAAVSVIILSAVAVAAMTGVLPNLSAG FT SSPQAAASAQEAALAGPEAANVASAPQQAPKQAQKPAQSAQPAQQPAQAGAPACATCGV FT VEGIRTVQVPVRDDSNHLIGTVAGGVVGGVVGNQFGGGHGRDALTVLGAVGGALAGREV FT ERNIREQQTVTHYELTVRMSDGSRRQFRSAQPFAFASGDRVRVENDQLLPG" FT misc_feature complement(51986..52051) FT /note="1 probable transmembrane helix predicted for BPP4231 FT by TMHMM2.0 at aa 13-35" FT misc_feature complement(51992..52090) FT /note="Signal peptide predicted for BPP4231 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.752 between residues 33 and 34" FT CDS 52218..52439 FT /transl_table=11 FT /locus_tag="BPP4232" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3733" FT /db_xref="UniProtKB/TrEMBL:Q7W318" FT /protein_id="CAE39511.1" FT /translation="MDTPITLPELEQAINYWRHRAPSQGDESRLCAQAAALATPYALMI FT IGHRRDITPAELSQAARAAYQAWLDSRK" FT CDS complement(52611..53213) FT /transl_table=11 FT /locus_tag="BPP4233" FT /product="SCO1/SenC family protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3734" FT /db_xref="GOA:Q7W317" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q7W317" FT /protein_id="CAE39512.1" FT /translation="MFAFTSARRRALQAVAAMGVAALLAACGESAPAFKGSDITGTQLG FT KKLALVDHNGKPRTLQDFAGKAVVVFFGFTQCPDVCPTSLAELSQVMKQLGPDADRVQV FT LLVTVDPERDTPEILKQYVTTFDPRFLGLTGTPEQIKQAAASFKAYYAKVPTQDGANYT FT MDHTAAFYLFDGKGESRVLATNTAGAEALAHDIKALL" FT misc_feature complement(52644..53165) FT /note="HMMPfam hit to PF02630, SCO1/SenC, score 1e-41" FT misc_feature complement(53109..53213) FT /note="Signal peptide predicted for BPP4233 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.724 between residues 35 and 36" FT misc_feature complement(53133..53165) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(53233..54126) FT /transl_table=11 FT /locus_tag="BPP4234" FT /product="UbiA prenyltransferase family protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3735" FT /db_xref="GOA:Q7W316" FT /db_xref="InterPro:IPR000537" FT /db_xref="UniProtKB/Swiss-Prot:Q7W316" FT /protein_id="CAE39513.1" FT /translation="MSSLAAPQTGLLRQYLVLTKPRVTQLAVFCAVIGMFLAAPGMPDL FT SHVVFGTLGIWLLAAAAFAINCLIEQEVDARMLRTARRATARGTISDIQVLSLSGLLGG FT AGMLVLYHLVNPLTMWLTFATFVGYAIIYTVILKPRTPQNIVIGGLSGAMPPALGWAAV FT ADSVPAEAWVLVLIIFIWTPPHFWALALYRNNDYIKAGLPMLPVTHGQQFTRLHILLYS FT FALLATTLLPYAIRMSGALYLASALALGGMFVWYAWRLYREYSDALARRLFRFSILYLA FT LLFGALLIDHWVGLLR" FT misc_feature complement(join(53245..53310,53350..53406,53422..53487, FT 53551..53607,53638..53694,53716..53775,53791..53856, FT 53920..53985,53998..54063)) FT /note="9 probable transmembrane helices predicted for FT BPP4234 by TMHMM2.0 at aa 21-43, 47-69, 90-112, 117-137, FT 144-163, 173-192, 213-235, 240-259 and 272-294" FT misc_feature complement(53254..54057) FT /note="HMMPfam hit to PF01040, UbiA prenyltransferase FT family, score 3.7e-70" FT CDS complement(54137..55168) FT /transl_table=11 FT /locus_tag="BPP4235" FT /product="putative cytochrome oxidase assembly protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3736" FT /db_xref="GOA:Q7W315" FT /db_xref="InterPro:IPR003780" FT /db_xref="UniProtKB/TrEMBL:Q7W315" FT /protein_id="CAE39514.1" FT /translation="MDRTKQRYRKLVFFTWFLTLDLIMFGAFVRLTDSGLGCPDWPGCY FT GSVTPLGAMSDIHQAASSMPFGPVTLSKAWIEMIHRYVGAFLGMLIIAIVWMAWRYRRE FT LGRSPALAVGALIAVCVQGAFGAWTVTHKLMPVVVTAHLVFGLLVLSLMTWLSARERPH FT APLSPQARRWRPWMTVGFLLLLAQITLGGWVSTNYAALACMDFPTCHGQLLPEMDFHGG FT FSLIRALGELPSGEMISQHALTAIHWTHRNFAFVVFAYVGVLAWRLRGEPGLRGPATLM FT LALLAAQLFTGLTTIFFQWPLLIAVLHNGGAAGLTLAAVVILVRLADAPQAAGVVRPQF FT DRV" FT misc_feature complement(54185..55168) FT /note="HMMPfam hit to PF02628, Cytochrome oxidase assembly FT protein, score 1.1e-07" FT misc_feature complement(join(54191..54256,54269..54334,54371..54436, FT 54566..54631,54695..54760,54776..54841,54881..54946, FT 55076..55132)) FT /note="8 probable transmembrane helices predicted for FT BPP4235 by TMHMM2.0 at aa 12-31, 74-96, 109-131, 136-158, FT 179-201, 244-266, 278-300 and 304-326" FT CDS complement(55171..55791) FT /transl_table=11 FT /locus_tag="BPP4236" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3737" FT /db_xref="UniProtKB/TrEMBL:Q7W314" FT /protein_id="CAE39515.1" FT /translation="MARSFAPSAPKRSMLPLVLVFLCALAPVLAAVIVYNNPQWWPEDS FT SNYGTLVQPQRPMPTAQQLQLTTLDGKPFDPAGLKGKWLLGVADQAACPESCARKLFIT FT RNSHASQGKNVDRVQRVWFITDDGEVPQKVLDAYRGTLMLRARPEQLGRYLLGQDAAAP FT AALLGPMWVIDPLGNLMLQFPPDVDGVKVRKDISRLLYNSRIG" FT misc_feature complement(55687..55752) FT /note="1 probable transmembrane helix predicted for BPP4236 FT by TMHMM2.0 at aa 13-35" FT misc_feature complement(55702..55791) FT /note="Signal peptide predicted for BPP4236 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.929 between residues 30 and 31" FT CDS complement(55817..56557) FT /transl_table=11 FT /locus_tag="BPP4237" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3738" FT /db_xref="InterPro:IPR002994" FT /db_xref="UniProtKB/TrEMBL:Q7W313" FT /protein_id="CAE39516.1" FT /translation="MAALLLLGIAAAILASLGRWQLHRADERRAVLAAIEGGRALAPLP FT LAPDTPAPQLTAWRAASAEGQWLPQFSVLLENRNHGGRPGYWLATPLRLHAGGAAVLVL FT RGWLPRALGAGQTLSVPAPPAGPQAVTGELMPRVPRLFELWSFGDARAGKLPDTLPASG FT ALPPVVQNLQLDDYARASGLTLLPTVLMQTGEHNDGLARDWPQPSVDYNQNIGYAMQWF FT AFAGIAAIAWLVVAARAWRRRRQA" FT misc_feature complement(55850..55906) FT /note="1 probable transmembrane helix predicted for BPP4237 FT by TMHMM2.0 at aa 217-236" FT misc_feature complement(56504..56557) FT /note="Signal peptide predicted for BPP4237 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.880) with cleavage site FT probability 0.452 between residues 18 and 19" FT CDS 56624..56824 FT /transl_table=11 FT /locus_tag="BPP4238" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3739" FT /db_xref="UniProtKB/TrEMBL:Q7W312" FT /protein_id="CAE39517.1" FT /translation="MRVIVIVAFIGILASLASALVYLMKDKGSTNRTVNALTVRIGLSV FT ALFLFVLLAHHLGWIESTGLR" FT misc_feature join(56630..56689,56732..56800) FT /note="2 probable transmembrane helices predicted for FT BPP4238 by TMHMM2.0 at aa 20-39 and 54-76" FT CDS complement(56934..57809) FT /transl_table=11 FT /gene="coIII" FT /locus_tag="BPP4239" FT /product="putative cytochrome c oxidase, subunit III" FT /note="ortholog of Bordetella pertussis (BX470248) BP3740" FT /db_xref="GOA:Q7W311" FT /db_xref="InterPro:IPR013833" FT /db_xref="UniProtKB/TrEMBL:Q7W311" FT /protein_id="CAE39518.1" FT /translation="MSASHSVQGKEAPYYYVPADSGHPVRTALALLAMGLGAAGWVNGA FT VWGKWVVLAGVIGLFLTLYFWFGDAIQESESGLYSKRIDASYRWGMSWFIFSEVMFFAG FT FFGALWYVRTITTPWLGDLDHKLLLWPDFNATWPNFGPAGVVEHFQTVGPFWLPTINTA FT LLLSSGVTLTIAHHALRENLRGKAIFWLFATVTLGFIFVACQAAEYIHAYADLNLKFNS FT GAYGSLFYMLTGFHGFHVIVGATMLTVILIRLIRGHFTADNHFGFEGAAWYWHFVDVVW FT LGLYLFVYWF" FT misc_feature complement(join(56940..56996,57057..57122,57183..57248, FT 57288..57353,57477..57542,57606..57671)) FT /note="6 probable transmembrane helices predicted for FT BPP4239 by TMHMM2.0 at aa 46-68, 89-111, 152-174, 187-209, FT 229-251 and 271-290" FT misc_feature complement(56940..57767) FT /note="HMMPfam hit to PF00510, Cytochrome c oxidase subunit FT III, score 1.7e-57" FT CDS complement(57872..58096) FT /transl_table=11 FT /locus_tag="BPP4240" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3741" FT /db_xref="UniProtKB/TrEMBL:Q7W310" FT /protein_id="CAE39519.1" FT /translation="MTDDLHKLSQRKLSFFQTMKAVLWGFFGVRKGAGYQDDIARLNPV FT HVIVAGLLAAAIFVIALVAIVRWAVAGLA" FT misc_feature complement(join(57899..57964,58010..58057)) FT /note="2 probable transmembrane helices predicted for FT BPP4240 by TMHMM2.0 at aa 13-29 and 44-66" FT CDS complement(58110..58232) FT /transl_table=11 FT /locus_tag="BPP4241" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3742" FT /db_xref="UniProtKB/TrEMBL:Q7W309" FT /protein_id="CAE39520.1" FT /translation="MTPEQRRRNRNVALILLALVAAVFVWTFIRGAVLFAGVTG" FT misc_feature complement(58131..58196) FT /note="1 probable transmembrane helix predicted for BPP4241 FT by TMHMM2.0 at aa 12-34" FT misc_feature complement(58137..58232) FT /note="Signal peptide predicted for BPP4241 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.987) with cleavage site FT probability 0.527 between residues 32 and 33" FT CDS complement(58267..59874) FT /transl_table=11 FT /gene="ctaD" FT /gene_synonym="coxA" FT /locus_tag="BPP4242" FT /product="cytochrome c oxidase polypeptide I" FT /EC_number="1.9.3.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP3743" FT /db_xref="GOA:Q7W308" FT /db_xref="HSSP:1AR1" FT /db_xref="InterPro:IPR014241" FT /db_xref="UniProtKB/TrEMBL:Q7W308" FT /protein_id="CAE39521.1" FT /translation="MSSVTVDHVSPGHGHGHDDHHHAMPSGWRRWLFATNHKDIGTMYL FT IFSFFMLMEGGVLALLLRTELFEPGLQFFRPELFNQFTTMHGLIMVFGAVMPAFVGFAN FT WMIPLQIGASDMAFARMNNFSFWLLPVAGIMLTVSFFVPGGATAAGWTLYAPLSAQMGP FT GMDLAIFALHIMGASSIMGAINIIVTVLNMRAPGMTLMKMPLFCWTWLITAFLLIAVLP FT VLAAAITMVLTDRHFGTGFFNAAAGGDPVLYQHVFWFFGHPEVYIMILPAFGIVSAIVP FT AFARKQLFGYASMVYATAAIAILAFIVWAHHMFTTGMPVTGQLYFMYATMLISIPTGVK FT VFNWVATMWRGSMTFETPMLFSVGFIFVFTIGGFTGLILSVAPIDIQVHDTYYVVAHFH FT YVLVAGSLFALFAGTYYWLPKWTGRMYSEKLGKLHFWSSMISFNITFFPMHFLGLAGMP FT RRYADYAAQFTTFHQLATIGAFWFGLSQLIFLWAVLRCYRGKGEVASAKPWEGAEGLEW FT TVPSPAPFHTFETPPEVK" FT misc_feature complement(join(58393..58458,58504..58569,58621..58686, FT 58732..58797,58837..58902,58948..59013,59035..59100, FT 59179..59244,59308..59373,59434..59499,59563..59628, FT 59689..59754)) FT /note="12 probable transmembrane helices predicted for FT BPP4242 by TMHMM2.0 at aa 40-62, 82-104, 125-147, 167-189, FT 210-232, 258-280, 287-309, 324-346, 359-381, 396-418, FT 435-457 and 472-494" FT misc_feature complement(58429..59787) FT /note="HMMPfam hit to PF00115, Cytochrome C and Quinol FT oxidase polypeptide I, score 4.5e-263" FT misc_feature complement(58939..59103) FT /note="PS00077 Heme-copper oxidase catalytic subunit, FT copper B binding region signature." FT CDS complement(59985..61163) FT /transl_table=11 FT /locus_tag="BPP4243" FT /product="putative bifunctional protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3744" FT /db_xref="GOA:Q7W307" FT /db_xref="HSSP:1FOC" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:Q7W307" FT /protein_id="CAE39522.1" FT /translation="MPCFEVSMKKWRGILGACALLIGSAAAAQVQDMPGGPRVNQLNLH FT EGITQISRDVVWLHWMMLAICIVIFIGVFGVMFYSIWAHRKSRGHKAATFHEHLGVEVA FT WTVIPFLIVIAMALPATKTVVAMKDTSSADVTVKVTGYQWKWGYEYLDGEAAGIKFLST FT LSTPRAQIENREPKGQFYLMEVDNHMVVPVDKKVRVVLTAGDVIHSWMVPDFGVKQGAI FT PGFLRDAWFRAEKPGIYRGQCAELCGKDHAFMPIVVEVLAQPEYDKWVADQKKKMAASA FT DDPNKEWTQAELVARGEKVFAANCVACHQANGKGIPGSFPPLDGDPVVLGPKAAQINTV FT LKGKPGTAMAAFGGQLNDVEVAAVITYTRNAWSNAGKGQDPVVQPKDVVAAR" FT misc_feature complement(60048..60293) FT /note="HMMPfam hit to PF00034, Cytochrome c, score 1.5e-07" FT misc_feature complement(60234..60251) FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature complement(60345..60761) FT /note="HMMPfam hit to PF00116, Cytochrome C oxidase subunit FT II, periplasmic domain, score 1.3e-52" FT misc_feature complement(60402..60548) FT /note="PS00078 CO II and nitrous oxide reductase dinuclear FT copper centers signature." FT misc_feature complement(60795..61058) FT /note="HMMPfam hit to PF02790, Cytochrome C oxidase subunit FT II, transmembrane domain, score 3.8e-05" FT misc_feature complement(join(60801..60866,60930..60995,61074..61124)) FT /note="3 probable transmembrane helices predicted for FT BPP4243 by TMHMM2.0 at aa 13-30, 56-78 and 99-121" FT misc_feature complement(61080..61163) FT /note="Signal peptide predicted for BPP4243 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.438 between residues 28 and 29" FT CDS 61411..62244 FT /transl_table=11 FT /locus_tag="BPP4244" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3745" FT /db_xref="GOA:Q7W306" FT /db_xref="HSSP:1Q27" FT /db_xref="InterPro:IPR000086" FT /db_xref="UniProtKB/TrEMBL:Q7W306" FT /protein_id="CAE39523.1" FT /translation="MPDTHYASQQRLTRLYAELGQRAQALPPDQARPLYIAGHCCGWVT FT HAACDALRASGLADLQPDADGLRIGADLAPGPTLDALLAQVAQSLRDARCLRGWRDELL FT DVCAGDLRLGAIERAAVRPLGLNTRAVHLNAWTPQGELWIARRAMTKSTDPGMWDTLVG FT GLAGSGENLETALVRECGEEAGLDPHQLEQRTPLRTILRMHRRLPEGYQVEDLLTSTCV FT LPADARPANRDGEVMEIATTSVDHAVRRIEAGEFTLEAALVIVEDIMQRRAEGTT" FT misc_feature 61789..62205 FT /note="HMMPfam hit to PF00293, NUDIX domain, score 1.6e-12" FT CDS complement(62434..64977) FT /transl_table=11 FT /locus_tag="BPP4245" FT /product="putative sodium/hydrogen exchanger family" FT /note="ortholog of Bordetella pertussis (BX470248) BP3746" FT /db_xref="GOA:Q7W305" FT /db_xref="InterPro:IPR000985" FT /db_xref="UniProtKB/TrEMBL:Q7W305" FT /protein_id="CAE39524.1" FT /translation="MDIGFLVFGLAGLLTLVCFMPPLAGRLKLPYSVLLALVGCLLGIG FT VHLHGWAPPVLGDLLDTIEHFEISSETFLMVFLPVLLFETALSMNVRRLIDDIGPILMM FT AIVAVVVCTLVVGFAVDAVSSYGLIVCLLLGAIVATTDPAAVVGIFREVGAPKRLTTLV FT EGESLFNDAASIALYSVLLAALGGSGELSVGAVFNDFIFHFVGGGLAGFLMGRLACALF FT AWLRGFPTAEITLTLTLAYLSFFISEHYLGVSGVVATVIAGLVVGSTGRTRMSPTTFEF FT LSSAWGQFGFWANSLIFLFAAMLIPKLMAEADWQELLLVLVVFAATLAARAIVVFGLLP FT LLRVARIGAEVSNPYKSVMWWGGLRGAVSLALALAVTEQSSVPEQARQFVAVATTGFVL FT MTLMINGVSLRPLIRMLGLNQLSPVERTIRNQVLAAALEDLQGRTEEIAKVDHVNPEAR FT DRIRAVFDASLTSVHDGQVGQMTLDQRVAVGLSIVARREEEMFFDILKAQIVDWRLAEG FT LLARAERLEDAVRAGGLAGFEAGIVADVRYSRLFRMALRTHYMFGFQGWLARELGKRFA FT SLLTKRSVARDLMKFAREQVAPLLGEEAADRIIAAHQRRLDLIENALQALTLQYPSYSL FT WLQESHLGRVARELERRRYRDMLEQFLISGEVYADLMAQLKARWQHIDKHPPLDIELGS FT AELVKRVPLFEGLSQDSLRAICRLLKPRLALPDQHILTEGRHGQEMCIVASGAVVVHLP FT DHTTIELGSGEFFGELALLGEEQLVPDVTSLGYSKLLMLSARDFHALLARDEHLRERIQ FT TVAKQRMRAIEVWKQYSQAAAAAAASTASEDSAPA" FT misc_feature complement(62560..62826) FT /note="HMMPfam hit to PF00027, Cyclic nucleotide-binding FT domain, score 2.5e-12" FT misc_feature complement(63718..64959) FT /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger FT family, score 9.3e-67" FT misc_feature complement(join(63754..63810,63850..63900,63961..64026, FT 64066..64131,64177..64242,64306..64371,64417..64473, FT 64537..64602,64618..64683,64705..64761,64822..64887, FT 64909..64965)) FT /note="12 probable transmembrane helices predicted for FT BPP4245 by TMHMM2.0 at aa 4-23, 30-52, 72-91, 98-120, FT 125-147, 168-187, 202-224, 245-267, 282-304, 317-339, FT 359-376 and 389-408" FT misc_feature complement(64906..64977) FT /note="Signal peptide predicted for BPP4245 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.658) with cleavage site FT probability 0.347 between residues 24 and 25" FT CDS 65089..65967 FT /transl_table=11 FT /locus_tag="BPP4246" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3747" FT /db_xref="GOA:Q7W304" FT /db_xref="InterPro:IPR004843" FT /db_xref="UniProtKB/TrEMBL:Q7W304" FT /protein_id="CAE39525.1" FT /translation="MARPACAGKFRYGENPVCPGAILSDSAAPVRADAPAVLVQLTDMH FT LFDEPHTAMLGVDTEASLQAVLRQVGEDGLNPDALLLTGDLSQDGSPASYQRLHALLAQ FT TGLPVRCLPGNHDAPATLRAELGAWSDPVLDLGAWRIVLLDSTVPGSNGGHLADDQLDL FT LSRAARLAGDRPLLVAVHHNPVQGDPDWHDTMMLDNAQLLFQRLQRLPQARVLLWGHVH FT QEFDCRRHNLRMLATPSTCFQFVVRDGKHCVDDAAPGYRWLKLYADGSLATGVRRLDGD FT RWRALLRQNAG" FT misc_feature 65194..65760 FT /note="HMMPfam hit to PF00149, Calcineurin-like FT phosphoesterase, score 7.6e-15" FT misc_feature 66005..66012 FT /note="Duplication due to IS1001 insertion" FT repeat_region 66013..66025 FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT repeat_region 66013..67319 FT CDS 66096..67316 FT /transl_table=11 FT /locus_tag="BPP4247" FT /product="transposase" FT /note="transposase for IS1001 element" FT /db_xref="GOA:Q7TTE7" FT /db_xref="InterPro:IPR002560" FT /db_xref="UniProtKB/TrEMBL:Q7TTE7" FT /protein_id="CAE39526.1" FT /translation="MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCE FT QCGARCRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRYQRVT FT DRLAQACSQLLQSSNVQAVARFFELGWHTVKTLEKARLRASVREPDWSKIEYLAMDEFA FT LHKGHRYATVVVDPISRQVLWIGPGRSRETARAFFEQLPPGAAQRIKAVAIDMTTAYEL FT EIQAHSPQAEIVYDLFHVVAKYGREVIDRVRVDQANQLRQDRPARRIIKSSRWLLLRNR FT DNLDRQQAVRLDELLQANQPLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGI FT AALNTFAQRLKGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRA FT AFPGNAR" FT misc_feature 66186..67175 FT /note="HMMPfam hit to PF01610, Transposase, score 1.1e-127" FT repeat_region complement(67307..67319) FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT misc_feature 67320..67326 FT /note="Duplication due to IS1001 insertion" FT CDS complement(67676..68599) FT /transl_table=11 FT /gene="rpoH" FT /gene_synonym="htpR" FT /gene_synonym="hin" FT /gene_synonym="fam" FT /locus_tag="BPP4248" FT /product="RNA polymerase sigma-32 factor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3748" FT /db_xref="GOA:Q7W303" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W303" FT /protein_id="CAE39527.1" FT /translation="MPVDNLPLEAANMTQPSSSLALSGNALALAVANPGALGTIDAYIS FT AVNRLPILTAEQEGQLARRLRDEGDLEAARELVVSHLRLVVSVARQYLGYGLPHADLIQ FT EGNVGLMKAVKRFDPERGVRLVSFAVHWIKAEIHEFIIRNWRLVKVATTKAQRKLFFNL FT RSMRPDGQTLDPEQVDHIARELNVRREDVSEMEVRLSGRDLSLESQDDDDDSFAPIAYL FT SDEGRQEPSRVLDRMAHDDLQGAGLGRALEALDARSRRIIEARWLQDDGGLTLHELAQE FT FGVSAERVRQIEAAALKKMRGALTPA" FT misc_feature complement(67694..68389) FT /note="HMMPfam hit to PF00140, Sigma-70 factor, score FT 1.8e-75" FT misc_feature complement(67700..67780) FT /note="PS00716 Sigma-70 factors family signature 2." FT misc_feature complement(68258..68299) FT /note="PS00715 Sigma-70 factors family signature 1." FT CDS complement(68707..69396) FT /transl_table=11 FT /locus_tag="BPP4249" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3749" FT /db_xref="UniProtKB/TrEMBL:Q7W302" FT /protein_id="CAE39528.1" FT /translation="MIDALAPFAWIGLAALIVLLPGLAMLFGRGGPRDEAGRRVFRLRP FT VRRLFGLLLLALAGVSGLLALSLVQFVRLTDDKPVAEVMVRQQGDGQFQLATRTPDQRM FT RDYTLYGDQWQIDAKVVRWRLPALLAGVPPLYRLERLSGRYQDTARERSAPRSVHALDD FT WPALDLAQVKRLVPNWLPFVDVQFGSAAYMPMFDGARYQVYLDPRGALFIRPADAATAE FT RLKQLGW" FT misc_feature complement(join(69184..69249,69313..69378)) FT /note="2 probable transmembrane helices predicted for FT BPP4249 by TMHMM2.0 at aa 6-28 and 49-71" FT CDS complement(69457..70305) FT /transl_table=11 FT /locus_tag="BPP4250" FT /product="putative esterase" FT /EC_number="3.1.1.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP3750" FT /db_xref="GOA:Q7W301" FT /db_xref="InterPro:IPR014186" FT /db_xref="UniProtKB/TrEMBL:Q7W301" FT /protein_id="CAE39529.1" FT /translation="MAVLELVSQHRCFDGWQRYYRHASKEIGLPMRFSVFVPPQAARGP FT VPVLFYLAGLTCTEETFMIKAGAQRLAAQHGVMLVAPDTSPRGAGFPGEDEHWDFGVGA FT GFYLDATAEPWRSHYRMYSYVVDELHGIVTGELPGDAGRVGIFGHSMGGHGALVLALRN FT PDKFRSVSAFAPVVAPAQVPWGHKAFERYLGPDRQAWEAYDASALMRTLRQPYPEGILV FT DQGLADGFLVEQLRPELFEAACRHAGQPLTLRRHEGYDHGYYFISTFIEDHIRFHVERL FT G" FT misc_feature complement(69466..70092) FT /note="HMMPfam hit to PF00756, Putative esterase, score FT 2.1e-74" FT CDS complement(70307..71413) FT /transl_table=11 FT /gene="adhI" FT /locus_tag="BPP4251" FT /product="alcohol dehydrogenase class III" FT /EC_number="1.1.1.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP3751" FT /db_xref="GOA:Q7W300" FT /db_xref="HSSP:1CDO" FT /db_xref="InterPro:IPR014183" FT /db_xref="UniProtKB/TrEMBL:Q7W300" FT /protein_id="CAE39530.1" FT /translation="MKTKAAIAWKAGAPLTVEDVDLEGPKAGEVLVEIKATGICHTDYY FT TLSGADPEGIFPAILGHEGAGVVMDVGPGVTTLKKGDHVIPLYTPECRQCKFCLSRKTN FT LCQAIRTTQGKGLMPDGTSRFSIDGKPLFHYMGTSTFANHIVVPEIALAKVRPDAPFDK FT ICYIGCGVTTGIGAVVFTAKVEAGANVVVFGLGGIGLNVIQGAKMVGADKIIGVDLNPA FT REAMARKFGMTHFVNPSEVENVVDHIIQMTDGGADYSFECIGNTKVMRQALECCHKGWG FT QSVIIGVAEAGAEISTRPFQLVTGREWKGSAFGGARGRTDVPKIVDWYMEGKINIDDLI FT THTLPLDRINEGFDLMKRGESIRSVVVY" FT misc_feature complement(70313..71389) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00107, Zinc-binding dehydrogenase, FT score 1.1e-135" FT misc_feature complement(71189..71233) FT /note="PS00059 Zinc-containing alcohol dehydrogenases FT signature." FT CDS 71597..72361 FT /transl_table=11 FT /locus_tag="BPP4252" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3752" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z9" FT /protein_id="CAE39531.1" FT /translation="MARLPRLYAPGLPQLVQANFVQPLAPPSQPAPQDILNQLGSWLGE FT SAQRHRFGVHAWVLANDRILLLATPADEEGLPRLMQTLGRNLAARLRGGRVFAGRYRSA FT LLEPGAWVLPSQVWLETYPVRSGAATEPDGWPWSSAGSHTGNTGAPPAQWQSDHADYWA FT CGNTPFDRQANYRRLLHDGLSREQTQRIEQAVSGQWALGSPAFIASLAHTASRRVAPGQ FT RGRPRKKPAPAAADTPDTPGTVHTPTTPNTSN" FT CDS 72706..77445 FT /transl_table=11 FT /gene="gltB" FT /gene_synonym="aspB" FT /locus_tag="BPP4253" FT /product="glutamate synthase [NADPH] large chain precursor" FT /EC_number="1.4.1.13" FT /note="ortholog of Bordetella pertussis (BX470248) BP3753" FT /db_xref="GOA:Q7W2Z8" FT /db_xref="HSSP:1EA0" FT /db_xref="InterPro:IPR006982" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z8" FT /protein_id="CAE39532.1" FT /translation="MPYTKSSDSCRPVAATPIDASRIGLPAPQGLYHPHNEHDACGVGF FT VAHIKGRKSHSIIQQGLKILENLDHRGAVGADKLMGDGAGILIQIPDALYRDELAQQGI FT VLPPPGEYGVAMVFLPKETASRLACEQELERSVRAEGQIVLGWRDVPVDVEMPMSPAVR FT GLEPVIRQLFIGRGADVMVPDALERKLYVIRKTASHAIQNMRLAHGKEYFVPSASVRTV FT VYKGLLLADQVGRYYRDLADPRTVSALALVHQRFSTNTFPAWPLAHPYRMIAHNGEINT FT VKGNFNWLRAREGMMQSAVLGDDLKKLYPIVYEGQSDTATFDNCLELLVNSGYSLAHAM FT MMMIPEAWEQHTQMDESRRAFYEYHAAMMEPWDGPAAVAFTDGRQIGATLDRNGLRPAR FT YLITDDDMVIMASEAGTLSIPENRIVKKWRLQPGKMFLIDLEQGRIIDDGEIKLQLANS FT RPYRQWIERLQVKLESLPAPRTASPATQTAVPLLDRQQAFGWTQEDFKFILEPMAASGE FT EVIGSMGNDAPLAVLSNRSKPFYNYFRQLFAQVTNPPIDPIREQMVMSLVSFIGPKPNL FT LDINNVNPPLRLEVTQPVLDFAAMAQIRDIDQVTGKKFRSYELDITYPTAWGSEGIEAR FT VAALCARAVDAVQSGYNILIVSDRLVDADRVAIPALLATSAVHQHLIRAGLRTNAGLVV FT ETGSAREVHHFALLGGYGAEAIHPYLALESLGHLADPDKAIKNYIKAIGKGLNKVMSKM FT GISTYMSYCGAQIFEAVGLQRALVDKYFTGTASNIEGIGIFQVAEEALRMHHAAFGNDP FT VLANDLDAGGEYAFRIRGEEHMWTPDSIAKLQHASRSNNYRTYKEYAQIINDQSRRHMT FT LRGLFEFRFDPTRAIPLDDVEPAKEIVRRFATGAMSLGSISTEAHSVLAVAMNRIGGKS FT NTGEGGEDELRYRAEMRSGGSAIKDGDTLASVLGNDRVEADVALRAGDSLRSRIKQVAS FT GRFGVSAEYLSSADQIQIKMAQGAKPGEGGQLPGHKVSEYIAKLRYSVPGVGLISPPPH FT HDIYSIEDLAQLIHDLKNVNARASVSVKLVSEVGVGTVAAGVAKAKADHVVIAGHDGGT FT GASPVSSIKHAGTPWELGLAETQQTLVLNRLRSRIRVQADGQMKTGRDVIIGALLGADE FT FGFATAPLVVEGCIMMRKCHLNTCPVGVATQDPELRKKFQGKPEHVVNYFFFVAEEVRE FT IMAQLGIRRFDDLIGRTDLLDMRASVEHWKAQGLDFSRVFHRIVSDADVRQTEEQDHGL FT AGALDHQLIERSKPALERGEKVSFIVPVRNRNRTIGAMLSGAVAARYGHDGLPDDTIHI FT QCNGTAGQSFGAFLAHGITMDLVGEANDYVGKGLSGGRIVVRSPNDFRGFGPDHIIAGN FT TVLYGALSGEAFFNGVAGERFAVRNSGAATVVEGTGDHGCEYMTGGTVVVLGTTGRNFA FT AGMSGGVAYVWDPDRTFRERCNSAMVELEPVLPHAEQQSANEIESWHSAQRGGERSTDE FT TILRRLVEDHFRYTGSFRAREILGDWEASRGKFVKVMPTEYRRALGELWRAANPQQMAA FT " FT misc_feature 75202..76404 FT /note="HMMPfam hit to PF01645, Conserved region in FT glutamate synthase, score 1.7e-232" FT misc_feature 76627..77217 FT /note="HMMPfam hit to PF01493, Domain of unknown function FT DUF14, score 3.9e-86" FT CDS 77442..78920 FT /transl_table=11 FT /locus_tag="BPP4254" FT /product="glutamate synthase [NADPH] small chain precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3754" FT /db_xref="GOA:Q7W2Z7" FT /db_xref="InterPro:IPR006005" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z7" FT /protein_id="CAE39533.1" FT /translation="MRISMGKITGFMEFQRLQEAAEAPQKRLKHWREFVLHLNDEQAKQ FT QAARCMDCGIPFCSNGCPVNNIIPDWNDLVYRQDWRRALDVLHSTNNFPEFTGRICPAP FT CEAACTLNINSDAVGIKSIEHAIIDKGWAEGWVTPQVPVRKTGKKVAVVGSGPAGLACS FT QQLARAGHSVTLFEKSDRIGGLLRYGIPDFKLEKSQIDRRIAQMEAEGVEFAPSTYIGN FT PDDAAADGLTVRTPQSLLADFDAVVMTGGSETPRDLPVPGRELSSVYYAMDFLRQQNKA FT VAGDRLSGQTLAKDKHVVVIGGGDTGSDCVGTSNRHGAASVTQFELLPQPPECEDKPMV FT WPYWPLKLRTSSSHDEGCERDWSVATKALAGSDGQVEKLVGVRVEWFKDEATGQMKMRE FT VEDSEFEIPADLVLLAIGFVSPVATVLDAFGVDRDARGNVRANTDDYRTNVDKVFAAGD FT MRRGQSLVVWAIREGRQCARSVDEYLMGASELPR" FT misc_feature 77886..78845 FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreductase, score 2.1e-27" FT CDS 79165..79803 FT /transl_table=11 FT /locus_tag="BPP4255" FT /product="putative outer membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3755" FT /db_xref="GOA:Q7W2Z6" FT /db_xref="InterPro:IPR005618" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z6" FT /protein_id="CAE39534.1" FT /translation="MYTLYRQGRATLGAALLAAGLLAAPARAHEAGDWLLKVGASQVRP FT KSNNGSVLNGSVDLDANNSVRPSFTVTYMATRNIGIELLAAWPFEHDIRGSGLGRIAST FT KQLPPTLSVQWHFLPDSTVQPYVGVGLNYTTFFDTKTHGALEGSDLRLGDSWGLAGQLG FT VDVKLNERWFLNADLRYIDISSKVKLDGQRIGTARIDPWVATVAVGYRF" FT misc_feature 79165..79248 FT /note="Signal peptide predicted for BPP4255 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.964 between residues 28 and 29" FT CDS 79885..80868 FT /transl_table=11 FT /locus_tag="BPP4256" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3756" FT /db_xref="GOA:Q7W2Z5" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z5" FT /protein_id="CAE39535.1" FT /translation="MKSFRPLAAALLAAATLAAAGPARAQADSWPSKPITLIVPYAPGG FT FADTRVRLLARKLGESLQQSIVVENKAGAGGVIGTNLVAKAAPDGYTIGTGNLAPMAVN FT PTLMPAIPYDAQKDLAPVVLIENSPLVLSVHNTLPVKNLQDLIALARQEPGKLTFGSSG FT VGGAHHLSGEMFREQAGIDIVHVPYKGGSLAATDLMGGHITMMFEMGYSALPSIQSKKV FT HPIAVTSLKRLDVLPDVPTMAESGLPGFESYNWQGIVAPAGTPAPIIARLNAEFNKILK FT DPEMVKAIADIGSQAGGGTPEEFGAFIKSETEKWAKVIKAGNISLQ" FT misc_feature 79885..79959 FT /note="Signal peptide predicted for BPP4256 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.838 between residues 25 and 26" FT misc_feature 80038..80856 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 7.9e-123" FT CDS 80963..81859 FT /transl_table=11 FT /locus_tag="BPP4257" FT /product="putative ABC transporter, ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3757" FT /db_xref="GOA:Q7W2Z4" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z4" FT /protein_id="CAE39536.1" FT /translation="MAVSPGAGRPWAAPNLLPLPMPVHTRNSSELALSLEDVALGYGDF FT TVLDGISMQVHAGQVVAVMGGSGSGKTTLLRAATGQIVAQRGSVQAFGTDVGSVSQDGL FT QSLRKRMGVLFQQGALFTDLNVFENVAFPLREHTALDEAELTARVLDKLDAVGLRTAAH FT LRVAEISGGMARRVALARAVVLEPELILYDEPFAGLDPISMGITARLIRSLADRLGCAT FT VLITHDVQESFAIADQVYLVGQGRLAAAGTPQQLAASQDPYVKQFLNGEPDGPVAFQYP FT ETPAFRAWLAQQEGRKP" FT misc_feature 81134..81697 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.2e-54" FT misc_feature 81155..81178 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 81467..81511 FT /note="PS00211 ABC transporters family signature." FT CDS 81856..82641 FT /transl_table=11 FT /locus_tag="BPP4258" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3758" FT /db_xref="InterPro:IPR003453" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z3" FT /protein_id="CAE39537.1" FT /translation="MSAHKALSGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRPGLV FT SQQVHFIGNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVV FT TALLFAGRAGTSLTAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVF FT SMVGILGGWIVGVLMIGVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEG FT WQARPTPEGVGRATTRTVVVGSLAVLGLDFILTALMFGN" FT misc_feature 81862..82632 FT /note="HMMPfam hit to PF02405, Domain of unknown function FT DUF140, score 1.2e-92" FT misc_feature join(81913..81969,82006..82074,82117..82185,82327..82395, FT 82453..82512,82573..82632) FT /note="6 probable transmembrane helices predicted for FT BPP4258 by TMHMM2.0 at aa 20-38, 51-73, 88-110, 158-180, FT 200-219 and 240-259" FT CDS 82654..83160 FT /transl_table=11 FT /locus_tag="BPP4259" FT /product="mce related protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3759" FT /db_xref="InterPro:IPR003399" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z2" FT /protein_id="CAE39538.1" FT /translation="MPREKTDFWVGLFVLLGAAALLFLALRAGNLSTFSFAPTYQLTAN FT FDNIGGLKVRAPVKSAGVVVGRVSRIAFDDKTFQAVVTFDLETAYRFPTDSSAAILTSG FT LLGEQYVGLAPGGEEEDFAEGGKIRYTQSAVVLEQLISQFLYGTAEKQGSSAAPETGAE FT PKPQQ" FT misc_feature 82654..82764 FT /note="Signal peptide predicted for BPP4259 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.990) with cleavage site FT probability 0.457 between residues 37 and 38" FT misc_feature 82672..82740 FT /note="1 probable transmembrane helix predicted for BPP4259 FT by TMHMM2.0 at aa 7-29" FT misc_feature 82681..83106 FT /note="HMMPfam hit to PF02470, mce related protein, score FT 7.9e-35" FT CDS 83236..84039 FT /transl_table=11 FT /locus_tag="BPP4260" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3760" FT /db_xref="GOA:Q7W2Z1" FT /db_xref="InterPro:IPR007428" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z1" FT /protein_id="CAE39539.1" FT /translation="MPPQVDLAMTKHSAARIATIAAAGVLLAGCAAPKNPDPRDPWEGF FT NRGVYKFNDTVDRALFKPVAQAYTFVTPQPVRSCVHNMFSNVGDLWSATNSFLQGRGHD FT FVNTIGRFLFNTTMGIGGCFDVASTTGARKIPNDFGVTLGVWGFGQGPYLVLPIWGASS FT LRDGVGLIGDWTGNQGATIGAIDNVPLRNSLWGLEAVDLRASLLDTTDTVDRVALDPYS FT FVRDAYLQRRAAMVRGTKTGDDTLPTYEDEGDDDAAPAAPAAQPQ" FT misc_feature 83293..83325 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 84073..84696 FT /transl_table=11 FT /locus_tag="BPP4261" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3761" FT /db_xref="InterPro:IPR008869" FT /db_xref="UniProtKB/TrEMBL:Q7W2Z0" FT /protein_id="CAE39540.1" FT /translation="MRFSIVSLLHRLFLAGALALAAGAQAAPDPMGPPDKFVLDAATQT FT IDILKSDQNVKAGNLAHINQVVDAHILPFVNFQKTTRLAAGRYWRQATDTQKAELAKAF FT RGTLVRTYSGALTKVDNGTTIKLLPFRGDPNADDVVVRSLISQSNSQPVQVDYRLEKTP FT QGWRIYDMNVEGIWLIENYRNQFAQQINQNGIDGLIQALNQRNQ" FT misc_feature 84073..84150 FT /note="Signal peptide predicted for BPP4261 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.997 between residues 26 and 27" FT CDS 84762..85613 FT /transl_table=11 FT /locus_tag="BPP4262" FT /product="probable ATP-binding ABC transporter protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3762" FT /db_xref="GOA:Q7W2Y9" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2Y9" FT /protein_id="CAE39541.1" FT /translation="MGNSLFFPGTSRFMSAVSLEHVSKIYQPRRRGWKQLFGQPAAPGF FT QALNDVSLQIEHGEFFGLLGPNGAGKTTLISILAGLAHATTGRASVCGYDVVADYKTAR FT RALGVVPQELVYDPFFTVRETLRIQSGYFGLRRNDDWIDEILFNLGLADKADTNMRALS FT GGMKRRVLVAQALVHRPPVIVLDEPTAGVDVDLRRTLWEFISRLNKAGHTIMLTTHYLE FT EAEALCTRIAMLKGGRIVALDTTQALLARVGGVDLEDAFVRIMHQDDPAEPRALNPEEA FT AS" FT misc_feature 84933..85472 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1e-51" FT misc_feature 84954..84977 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 85245..85289 FT /note="PS00211 ABC transporters family signature." FT CDS 85610..86425 FT /transl_table=11 FT /locus_tag="BPP4263" FT /product="putative ABC-2 type transporter protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3764" FT /db_xref="GOA:Q7W2Y8" FT /db_xref="InterPro:IPR013526" FT /db_xref="UniProtKB/TrEMBL:Q7W2Y8" FT /protein_id="CAE39542.1" FT /translation="MSQSDTSAASRPLVQPRLDAGSGFPTLLRKELLRFWKVSFQTIAA FT PVITALLYLLVFAHVLEGRLVVYGSVPYTAFLIPGLMMMSMLQNAFANPSSSLIQSRVT FT GNLVFMLLPPLSHREIFAAYVLAAVVRGMAVELCVWIVALFFIPLPPQNLAWVLLFAML FT ACGIMGVLGLIAGLWSEKFDQLAAFQNFLIMPATFLSGVFYSIHTLPPFWQAVSHWNPI FT FYTIDGFRYGFFSVSDVSPWHSLAVVAGVFVVLSLYALRLLGSGYKLRN" FT misc_feature 85694..86413 FT /note="HMMPfam hit to PF01061, ABC-2 type transporter, FT score 0.00016" FT misc_feature join(85724..85792,85805..85873,85901..85960,85979..86047, FT 86075..86143,86180..86248,86333..86401) FT /note="7 probable transmembrane helices predicted for FT BPP4263 by TMHMM2.0 at aa 39-61, 66-88, 98-117, 124-146, FT 156-178, 191-213 and 242-264" FT CDS 86425..86676 FT /transl_table=11 FT /locus_tag="BPP4264" FT /product="BolA-like protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3765" FT /db_xref="HSSP:1V9J" FT /db_xref="InterPro:IPR002634" FT /db_xref="UniProtKB/TrEMBL:Q7W2Y7" FT /protein_id="CAE39543.1" FT /translation="MSMLPTPEQVRQYIADGLPCEHLDVQGDGSHFDAVIVSAAFEGKR FT LIARHQLVYAALGDRMKAEIHALSMRTLTPAEYAKAGS" FT misc_feature 86437..86658 FT /note="HMMPfam hit to PF01722, BolA-like protein, score FT 5.3e-22" FT CDS 86676..87944 FT /transl_table=11 FT /gene="murA" FT /gene_synonym="murZ" FT /locus_tag="BPP4265" FT /product="UDP-N-acetylglucosamine FT 1-carboxyvinyltransferase" FT /EC_number="2.5.1.7" FT /note="ortholog of Bordetella pertussis (BX470248) BP3766" FT /db_xref="GOA:Q7W2Y6" FT /db_xref="HSSP:1EJD" FT /db_xref="InterPro:IPR005750" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Y6" FT /protein_id="CAE39544.1" FT /translation="MDKLRITGGSPLRGEVTVSGAKNAALPILCASLLTAEPLVLGNVP FT QLNDTSTTLRLLGRMGVRAERAGDGTVTLQADQVDNLEAPYELVKTMRASILVLGPLLA FT RFGQARVSLPGGCAIGQRPVDQHIKGLAALGAEIEIEHGFVVARATRLKGASIRTDMVT FT VTGTENLLMAAVLAEGQTVLENAAREPEVVDLAELLIKMGARIQGHGTDRIVVDGVARL FT HGARHDVIADRIEAGTFLCAVGAAGGDITLRGAAPDTMGATLDKLVEAGLTIETGPDWI FT RGAMHGRPCAVGARTHEYPGFATDMQAQLMALDTVADGTAVIVENIFENRYMHVQELCR FT LGADIDIDGHTAVVRGVARLSGATVMATDLRASASLVIAGLAAEGETLVDRIYHLDRGY FT DRMEVKLRALGASIQRVTGKETA" FT misc_feature 86691..87893 FT /note="HMMPfam hit to PF00275, EPSP synthase FT (3-phosphoshikimate 1-carboxyvinyltransferase), score FT 1.8e-135" FT CDS 87941..88612 FT /transl_table=11 FT /gene="hisG" FT /locus_tag="BPP4266" FT /product="putative ATP phosphoribosyltransferase" FT /EC_number="2.4.2.17" FT /note="ortholog of Bordetella pertussis (BX470248) BP3767" FT /db_xref="GOA:Q7W2Y5" FT /db_xref="InterPro:IPR018198" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Y5" FT /protein_id="CAE39545.1" FT /translation="MSPAAAPLTLALSKGRIFEETMPLLAEAGIEVPENPESSRKLILP FT TSDPGLRLIIVRASDVPTYVQYGAADLGIAGKDVLIEHAAQQSGRLYQPIDLNIAKCRL FT CVAVRQDFDYQAAVHQGARLRVATKYVQSAREHFAAKGVHVDIIKLYGSMELAPLVGLA FT DAIVDLVSTGGTLRANGLAAVEDVMPISSRLIVNQAALKTRGARLQPLIDAFRRASERI FT A" FT misc_feature 88106..88597 FT /note="HMMPfam hit to PF01634, ATP FT phosphoribosyltransferase, score 1.5e-50" FT misc_feature 88403..88468 FT /note="PS01316 ATP phosphoribosyltransferase signature." FT CDS 88645..89967 FT /transl_table=11 FT /gene="hisD" FT /locus_tag="BPP4267" FT /product="putative histidinol dehydrogenase" FT /EC_number="1.1.1.23" FT /note="ortholog of Bordetella pertussis (BX470248) BP3768" FT /db_xref="GOA:Q7W2Y4" FT /db_xref="InterPro:IPR012131" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Y4" FT /protein_id="CAE39546.1" FT /translation="MQYHDAMALINRLDSRDPGFKTALSQLLAFEAEQDESIDQAAAGI FT LADVRRRGDAALLEYTQRFDRLAVDDATALEIPQADWHAALDSLPAAQRQALEAAAARV FT RAYHERQRGETWTYTEADGTMLGQQITALDRVGLYVPGGKAAYPSSVLMNAIPAKVAGV FT PELIMVTPTPDGVRNPIVLAAAAIAGVDRAFAIGGAQAVGALAYGTATVPAVDKIVGPG FT NAYVAAAKRRVFGTVGIDMIAGPSEILVICDGKTPADWIAMDLFSQAEHDELAQSILLC FT PDAAFLAEVEAAIERLLPGMPRADILRVSLANRGALILVRDLEEACAIANDIAPEHLEI FT STEQPQRWTALIRHAGAIFMGRYSSEALGDYCAGPNHVLPTSRTARFSSPLGVYDFQKR FT SSLIQVSREGAQTLGRIAAELALGEGLQAHAASAQYRLDQP" FT misc_feature 88714..89958 FT /note="HMMPfam hit to PF00815, Histidinol dehydrogenase, FT score 6.6e-181" FT CDS 89964..91061 FT /transl_table=11 FT /gene="hisC" FT /locus_tag="BPP4268" FT /product="putative histidinol-phosphate aminotransferase" FT /EC_number="2.6.1.9" FT /note="ortholog of Bordetella pertussis (BX470248) BP3769" FT /db_xref="GOA:Q7W2Y3" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Y3" FT /protein_id="CAE39547.1" FT /translation="MTGVAAPERIARAVRADIRALTAYPVADAAGCIKLDAMECPYELP FT AEVRDDIARAARETPLNRYPAAANPALQAQVRQAFEVPAQAGLLFGNGSDELIHLIIQA FT CCEPGDTVLSPWPSFVYFDMAARLSHARFVGVPLTAGLELDLPATLAAIEAHQPKVVFL FT ALPNNPTGGLWPDAAVRAILDAAPGLVVLDEAYQPFAGHTWMPRIMDEPNAVVMRTVSK FT IGLAGLRFGYLAGHPAWIAEFDKVRPPYNMDVLSQAVLAAVLRHKPVLDAQADRLHADR FT QPLADGLAALPGVTVFPSAGNFVLARFCGKLDGNAVHLALKTRKILVRNFSNAHPLLAD FT CLRISVGTPTENAAVLSALQDILSA" FT misc_feature 90213..91052 FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 1.9e-23" FT CDS 91063..91650 FT /transl_table=11 FT /gene="hisB" FT /locus_tag="BPP4269" FT /product="imidazoleglycerol-phosphate dehydratase" FT /EC_number="4.2.1.19" FT /note="ortholog of Bordetella pertussis (BX470248) BP3770" FT /db_xref="GOA:Q7W2Y2" FT /db_xref="InterPro:IPR000807" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Y2" FT /protein_id="CAE39548.1" FT /translation="MRTAEITRNTNETRIRVAVNLDGTGKQTIDTGVPFLDHMLDQIAR FT HGLIDLDIKADGDLHIDAHHTVEDVGITLGMAIAKAVGSKAGLRRYGHAYVPLDEALSR FT VVIDFSGRPGLEYHIDFTRARIGDFDVDLTREFFQGLVNHALMTLHIDNLRGFNAHHQC FT ETVFKAFGRALRMALEVDPRMGDAVPSTKGVL" FT misc_feature 91153..91587 FT /note="HMMPfam hit to PF00475, Imidazoleglycerol-phosphate FT dehydratase, score 1.7e-89" FT misc_feature 91243..91284 FT /note="PS00954 Imidazoleglycerol-phosphate dehydratase FT signature 1." FT misc_feature 91528..91566 FT /note="PS00955 Imidazoleglycerol-phosphate dehydratase FT signature 2." FT CDS 91682..92359 FT /transl_table=11 FT /gene="hisH" FT /locus_tag="BPP4270" FT /product="amidotransferase" FT /EC_number="2.4.2.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3771" FT /db_xref="GOA:Q7W2Y1" FT /db_xref="InterPro:IPR016226" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Y1" FT /protein_id="CAE39549.1" FT /translation="MSTIAIVDYGMGNFHSVARALQHAAPDADIRICNRPEQIDAADRV FT VFPGQGAMPDCMRTLNESGLRAAVERAAASKPLMGVCVGEQMLFERSEEGDTPCLGIFP FT GEVRRFAGPQFADPVAADQAAAAPPAAARERLKVPHMGWNQVRQTRSHALWEGIPDGTH FT FYFVHSYYAAPSDPALTTGVTDYGVAFTCAVAAANIFAVQFHPEKSAEHGLRLYRNFVD FT WQP" FT misc_feature 91694..92350 FT /note="HMMPfam hit to PF00117, Glutamine amidotransferase FT class-I, score 5.6e-25" FT misc_feature 91910..91945 FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT CDS 92378..93163 FT /transl_table=11 FT /gene="hisA" FT /locus_tag="BPP4271" FT /product="histidine biosynthesis protein" FT /EC_number="5.3.1.16" FT /note="ortholog of Bordetella pertussis (BX470248) BP3772" FT /db_xref="GOA:Q7W2Y0" FT /db_xref="InterPro:IPR006062" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Y0" FT /protein_id="CAE39550.1" FT /translation="MGRYFQRLFQRSLSTMLLIPAIDLKDGRCVRLRQGDLDDATVFSE FT DPAAMASHWLDLGARRLHLVDLNGAVAGKPKNEAPIKAILQAVGDDIPVQIGGGIRDLD FT TIERYLDAGISYVIIGTAAVKNPGFLQDACGAFPGQIIVGLDARDGKVATDGWSKLTRH FT DVLDLAKKFEDYGCEAIIYTDIGRDGMLSGVNVDATVRLAQHVRIPVFASGGIAGLSDI FT EALCAVEDDGVEGAILGRSIYEGALDFQAAQARADELAK" FT misc_feature 92423..93127 FT /note="HMMPfam hit to PF00977, Histidine biosynthesis FT protein, score 2.5e-87" FT CDS 93160..93969 FT /transl_table=11 FT /gene="hisF" FT /locus_tag="BPP4272" FT /product="histidine biosynthesis protein" FT /EC_number="4.1.3.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3773" FT /db_xref="GOA:Q7W2X9" FT /db_xref="InterPro:IPR004651" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2X9" FT /protein_id="CAE39551.1" FT /translation="MNASRIAAAGASTLTRRIIPCLDVTAGRVVKGVNFVNLTDAGDPV FT EIARRYNEQGADELTFLDITATSDGHDLILPIIEQVASQVFIPLTVGGGVRQVSDVQRL FT LNAGADKISINSAAVANPELVRAAADYHGSQCIVVAIDARRSSAEGEPARWEVFTHGGR FT KATGLDAVAWARRMAAYGAGEILLTSMDRDGTKSGFDLELTRAVSDAVPVPVIASGGVG FT NLQHLADGVTTGRASAVLAASIFHFGQHTVRECKQYMAERGIAVRLT" FT misc_feature 93205..93936 FT /note="HMMPfam hit to PF00977, Histidine biosynthesis FT protein, score 3.9e-135" FT CDS 93966..94370 FT /transl_table=11 FT /gene="hisI" FT /locus_tag="BPP4273" FT /product="putative phosphoribosyl-AMP cyclohydrolase" FT /EC_number="3.5.4.19" FT /note="ortholog of Bordetella pertussis (BX470248) BP3774" FT /db_xref="GOA:Q7W2X8" FT /db_xref="InterPro:IPR002496" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2X8" FT /protein_id="CAE39552.1" FT /translation="MNTEPTWMAEVVFDENGLIPAIAQDAETGQILMVAWMNREALAET FT AATGRAVYWSRSRQRLWRKGEESGHAQDVHELRLDCDGDVILLKVHQNGGIACHTGRAS FT CFYRRLEGTASQAEWITIDPVLKDPELIYK" FT misc_feature 94062..94298 FT /note="HMMPfam hit to PF01502, Phosphoribosyl-AMP FT cyclohydrolase, score 6.6e-51" FT CDS 94367..94714 FT /transl_table=11 FT /gene="hisE" FT /locus_tag="BPP4274" FT /product="phosphoribosyl-ATP pyrophosphohydrolase" FT /EC_number="3.6.1.31" FT /note="ortholog of Bordetella pertussis (BX470248) BP3775" FT /db_xref="GOA:Q7W2X7" FT /db_xref="InterPro:IPR008179" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2X7" FT /protein_id="CAE39553.1" FT /translation="MTTPTAGDDILSRIADTLATRRPEAGGDPQSSYVAKLLSKAPDAF FT LKKIGEEATELVMAAKDGQPDRIISETADLWFHCLVALTHYNLRPEDVLAELARREGLS FT GLEEKARRPRD" FT misc_feature 94397..94672 FT /note="HMMPfam hit to PF01503, Phosphoribosyl-ATP FT pyrophosphohydrolase, score 8e-31" FT CDS 94729..95097 FT /transl_table=11 FT /locus_tag="BPP4275" FT /product="MttA/Hcf106 family protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3776" FT /db_xref="GOA:Q7W2X6" FT /db_xref="HSSP:1AV5" FT /db_xref="InterPro:IPR019808" FT /db_xref="UniProtKB/TrEMBL:Q7W2X6" FT /protein_id="CAE39554.1" FT /translation="MSDNCIFCKIARGEIPAKKVFEDDEFVAFHDINPAAPVHLLLIPR FT RHVVSLQDIAEGDADWLGRMTVLASRLAAGNGCNPGPDGGFRLMANSGAEGGQEVPHLH FT FHILGGPRPWKGRVAPAA" FT misc_feature 94732..95079 FT /note="HMMPfam hit to PF01230, HIT family, score 2e-39" FT misc_feature 94999..95055 FT /note="PS00892 HIT family signature." FT CDS 95113..95340 FT /transl_table=11 FT /gene="tatE" FT /locus_tag="BPP4276" FT /product="Sec-independent protein translocase protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3777" FT /db_xref="GOA:Q7W2X5" FT /db_xref="InterPro:IPR006312" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2X5" FT /protein_id="CAE39555.1" FT /translation="MGSFSIWHWLIVLVIIALVFGTKKLRNVGSDLGSAVKGFKEGMKD FT ASADKPADQVTQQRVSDDTIDVQAKEKSNS" FT misc_feature 95122..95175 FT /note="1 probable transmembrane helix predicted for BPP4276 FT by TMHMM2.0 at aa 4-21" FT misc_feature 95122..95325 FT /note="HMMPfam hit to PF02416, mttA/Hcf106 family, score FT 6.8e-12" FT CDS 95413..95868 FT /transl_table=11 FT /gene="tatB" FT /locus_tag="BPP4277" FT /product="Sec-independent protein translocase protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3778" FT /db_xref="GOA:Q7W2X4" FT /db_xref="InterPro:IPR018448" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2X4" FT /protein_id="CAE39556.1" FT /translation="MFDVSFTELMVIGVIALVVIGPERLPKVARTIGHLLGRAQRYVND FT VKSDIRREIELDELRKFKDEMDETARSMQTSLRETEDTLRDSTQALRAELDDTARDASK FT AVNGADAPAEPAPAVASDTDTDTDTRSIAPPAAATPADKTPPTGSAT" FT misc_feature 95422..95607 FT /note="HMMPfam hit to PF02416, mttA/Hcf106 family, score FT 0.0001" FT CDS 95865..96665 FT /transl_table=11 FT /gene="tatC" FT /locus_tag="BPP4278" FT /product="putative Sec-independent protein translocase FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3779" FT /db_xref="InterPro:IPR019822" FT /db_xref="UniProtKB/TrEMBL:Q7W2X3" FT /protein_id="CAE39557.1" FT /translation="MSQDASNDNPDQQQDSFISHLVELRSRLLKAAGAVVAVFIVLFLY FT PGASAIYDVLAQPMLASLPEGTRMIATGVITPFMVPVKVTMMAAFVVALPVVLYQAWAF FT VAPGLYKHEKRLALPLILSSTLLFIIGMAFCYFFVFRTVFHFIATFAPQSITPAPDIEA FT YLSFVMTMFMAFGITFEVPVAVVLLVKTGIVEVAKLRAARGYVVVGAFVIAAVVTPPDV FT VSQFMLAVPLCLLYEVGLLCARLVTPRRRGEEESEDDQALTERH" FT misc_feature 95940..96557 FT /note="HMMPfam hit to PF00902, MttB family UPF0032, score FT 3.4e-75" FT misc_feature join(95964..96032,96114..96182,96216..96284,96363..96431, FT 96465..96518,96528..96587) FT /note="6 probable transmembrane helices predicted for FT BPP4278 by TMHMM2.0 at aa 34-56, 84-106, 118-140, 167-189, FT 201-218 and 222-241" FT CDS 96743..97099 FT /transl_table=11 FT /locus_tag="BPP4279" FT /product="putative DNA-binding protein" FT /note="Poor database matches. Similar to the N-terminal FT region of Pseudomonas aeruginosa transcription regulatory FT protein PrtR1 SWALL:PRTR_PSEAE (SWALL:Q06553) (256 aa) FT fasta scores: E(): 0.96, 39.36% id in 94 aa" FT /db_xref="GOA:Q7W2X2" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q7W2X2" FT /protein_id="CAE39558.1" FT /translation="MSQADRLRALMRWRGISSQNQLARISGVPQSTIHRILARGDAYAP FT TRATLERLARALHTTVPWLSDGMLGTSAAPGPAPAAPDGSLAELQSLWARLPRPARRHV FT LAVVRLAAAGTDRG" FT misc_feature 96761..96934 FT /note="HMMPfam hit to PF01381, Helix-turn-helix, score FT 2.2e-08" FT CDS complement(97110..98225) FT /transl_table=11 FT /gene="degQ" FT /gene_synonym="hhoA" FT /locus_tag="BPP4280" FT /product="protease" FT /EC_number="3.4.21.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP0280" FT /db_xref="GOA:Q7W2X1" FT /db_xref="InterPro:IPR001254" FT /db_xref="UniProtKB/TrEMBL:Q7W2X1" FT /protein_id="CAE39559.1" FT /translation="MTVSLAILFVVTTLRPDWLRLSGPAPATRAPAAAASGQAGASYAD FT AVARAAPAVVNVYTTKHVNVPLVPLPDDPVLRQLFGQVPGLSRREASTSLGSGVIVSAE FT GYVLTNYHVVEAADAIEVALADGRQAAAKVVGADPETDLAVLKLAGKLGELPVATFADK FT RAPRVGDVVLAIGNPFGVGQTTTQGIVSALGRNGLGINTYENFIQTDAAINPGNSGGAL FT IDAHGDLVGINTAIYSETGGSLGIGFAIPVDSARRVMEDIVRTGAVRRGWFGIEPQDMT FT PELARAFQLPREARGVIIAGVMRDGPAGKAGMRVGDIVQALNGAPVIDTRGLLGQIASL FT QPGQQAVASVLRAGKPVELKVTVGVRPSRPR" FT misc_feature complement(97167..97445) FT /note="HMMPfam hit to PF00595, PDZ domain (Also known as FT DHR or GLGF), score 1.1e-06" FT misc_feature complement(97449..97982) FT /note="HMMPfam hit to PF00089, Trypsin, score 2.6e-25" FT CDS 98279..99055 FT /transl_table=11 FT /locus_tag="BPP4281" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0279" FT /db_xref="HSSP:1NMO" FT /db_xref="InterPro:IPR002678" FT /db_xref="UniProtKB/TrEMBL:Q7W2X0" FT /protein_id="CAE39560.1" FT /translation="MKTIHIRELADWLDGALQAARFKDYCPNGLQVEGKAEIAHIITGV FT TASEALLRAAIERGADAVLVHHGWFWRNEDRRVLGPRRTRLALALGHELNLLAYHLPLD FT AHPQWGNNAQLARVLGLQAETGPDGAPRTCGADNLVWLGSAPGVQTVAQLQQRVAERLG FT RTPLVVGEPDRPVRRVAWCTGGAQGMLADAVDAGADAYITGEASESTVHLARETGVAFV FT GAGHHATERYGVQALGEAVARQFGIRVEFIDIDNPV" FT misc_feature 98315..99040 FT /note="HMMPfam hit to PF01784, Domain of unknown function FT DUF34, score 1.9e-63" FT CDS complement(99080..99538) FT /transl_table=11 FT /gene="mscL" FT /locus_tag="BPP4282" FT /product="large-conductance mechanosensitive channel" FT /note="ortholog of Bordetella pertussis (BX470248) BP0278" FT /db_xref="GOA:Q7W2W9" FT /db_xref="InterPro:IPR001185" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2W9" FT /protein_id="CAE39561.1" FT /translation="MSKATGFIKEFRDFAVKGNAIDLAVGVIIGAAFGKIVDSLVKDVV FT MPLVNFILGGSVDFSNKFLVLSMPDGYTGPMMYADLTKAGANVLAWGNFITIIINFVLL FT AFVIFWMVKAIYSARRKEEAAPEAPAAPPEDVTVLREIRDLLKDKQGS" FT misc_feature complement(99092..99520) FT /note="HMMPfam hit to PF01741, Large-conductance FT mechanosensitive channel, MscL, score 5.5e-49" FT misc_feature complement(join(99209..99274,99341..99406,99428..99478)) FT /note="3 probable transmembrane helices predicted for FT BPP4282 by TMHMM2.0 at aa 20-37, 44-66 and 88-110" FT CDS 99678..100319 FT /transl_table=11 FT /gene="petA" FT /locus_tag="BPP4283" FT /product="ubiquinol-cytochrome C reductase iron-sulfur FT subunit" FT /EC_number="1.10.2.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP0277" FT /db_xref="GOA:Q7W2W8" FT /db_xref="InterPro:IPR005805" FT /db_xref="UniProtKB/TrEMBL:Q7W2W8" FT /protein_id="CAE39562.1" FT /translation="MSQDTLVHDDDGAVDPNLPPDPSRRFWVTTACAVGGVAGVATAVP FT FVSTFAPSEKARAAGAPVEVDVGDLAPGQMRTVEWRGKPVWIIRRTDDQLKGIKSQDGL FT MADPNSERPGFTPAYAKNEYRSRKPELFVCVGICTHLGCSPTAHFETGGGAGMPGNWQG FT GFLCPCHGSTFDMAGRVYKDKPAPDNLEVPPYQYLSDTRIIVGVDEDNKA" FT misc_feature 99753..99821 FT /note="1 probable transmembrane helix predicted for BPP4283 FT by TMHMM2.0 at aa 26-48" FT misc_feature 99930..100271 FT /note="HMMPfam hit to PF00355, Rieske [2Fe-2S] domain, FT score 2.5e-06" FT misc_feature 100089..100109 FT /note="PS00199 Rieske iron-sulfur protein signature 1." FT misc_feature 100176..100193 FT /note="PS00200 Rieske iron-sulfur protein signature 2." FT CDS 100384..101766 FT /transl_table=11 FT /gene="petB" FT /gene_synonym="cytB" FT /locus_tag="BPP4284" FT /product="cytochrome B" FT /note="ortholog of Bordetella pertussis (BX470248) BP0276" FT /db_xref="GOA:Q7W2W7" FT /db_xref="InterPro:IPR016175" FT /db_xref="UniProtKB/TrEMBL:Q7W2W7" FT /protein_id="CAE39563.1" FT /translation="MAGEKTVETTGLLGWLDQRFPVTSTWKAHLSEYYAPKNFNFWYFF FT GSLALLVLVIQIVTGIFLVMHYKPDAERAFQSVEYIMREVPWGWLVRYMHSTGASMFFV FT VVYLHMLRGLFYGSYRKPRELVWIFGVAIFLCLMGEAFFGYLLPWGQMSYWGAQVIVNL FT FSAIPFIGPELSIWIRGDYVVSDATLNRFFSFHVIAIPLVLIGLVAAHLVALHEVGSNN FT PDGVEIKKGPKDKYGRPKDGIPFHPFYTVHDIMGVAGFLIIFAAIVFFGPEMGGYFLEY FT NNFLPADPLKTPPHIAPVWYFTPFYSMLRATTDVFTWVLAGAAILGAIALLLRAKGAMR FT IVAPVILVVVAVLLRTIDAKFWGVVAMGGAVVILFFLPWLDHFPVKSIRYRPTWHKWLY FT GIFIVNFLVLGYLGTQPPSDAFNLTSQIGTLIYLGFFFLMPVWSRLGTFKPVPDRVTFH FT AH" FT misc_feature 100420..101040 FT /note="HMMPfam hit to PF00033, Cytochrome FT b(N-terminal)/b6/petB, score 1.7e-84" FT misc_feature join(100504..100572,100669..100737,100756..100824, FT 100852..100920,100957..101025,101128..101196, FT 101326..101382,101392..101445,101464..101523, FT 101566..101622,101641..101709) FT /note="11 probable transmembrane helices predicted for FT BPP4284 by TMHMM2.0 at aa 41-63, 96-118, 125-147, 157-179, FT 192-214, 249-271, 315-333, 337-354, 361-380, 395-413 and FT 420-442" FT misc_feature 100633..100668 FT /note="PS00192 Cytochrome b/b6 heme-ligand signature." FT CDS 101786..102640 FT /transl_table=11 FT /gene="petC" FT /locus_tag="BPP4285" FT /product="cytochrome C1 precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP0275" FT /db_xref="GOA:Q7W2W6" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:Q7W2W6" FT /protein_id="CAE39564.1" FT /translation="MTMIKKLIGAVALMLTCTATLAAEGGFPLEKAPDRINDVASLQNG FT AKLFVNYCLNCHSAQSMRYNKLQDIGLTDQQIQDSLLFTGDKVGDLMKIAMTPQDAKKW FT FGTTPPDLSVIARAKSVNAGPSGADYLYTYLRTFYRDTSKATGWNNLAFPNVGMPHALW FT DRQGPRELTTVAVHQVEAADGTRNWERVTTVYDAQGYATAKTEPLADYRGHGSLETRFK FT AVNPAQSAAYDQNVADLTAFMSWMAEPVQLYRKQLGVWVLLFLGLFLVVAWRLNAAYWK FT HVR" FT misc_feature 101786..101851 FT /note="Signal peptide predicted for BPP4285 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.992 between residues 22 and 23" FT misc_feature join(101804..101872,102551..102619) FT /note="2 probable transmembrane helices predicted for FT BPP4285 by TMHMM2.0 at aa 7-29 and 256-278" FT misc_feature 101846..102634 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02167, Cytochrome C1 family, score FT 2.4e-06" FT misc_feature 101942..101959 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS 102799..103410 FT /transl_table=11 FT /gene="sspA" FT /gene_synonym="ssp" FT /locus_tag="BPP4286" FT /product="stringent starvation protein A" FT /note="ortholog of Bordetella pertussis (BX470248) BP0274" FT /db_xref="HSSP:1E6B" FT /db_xref="InterPro:IPR010987" FT /db_xref="UniProtKB/TrEMBL:Q7W2W5" FT /protein_id="CAE39565.1" FT /translation="MMVLYSGTTCPFSQRCRFVLFEKGMDFEIRDIDLYNKPEDISVMN FT PYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADPVMRARTRLFLYNFEKELFVH FT VCALEDRSAKPDDKKMVQARQSIRDRLAQLAPMLLKNKYMLGDEFSMLDVAVAPLLWRL FT DHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMRR" FT misc_feature 102802..103014 FT /note="HMMPfam hit to PF02798, Glutathione S-transferase, FT N-terminal domain, score 1.7e-14" FT CDS 103420..103869 FT /transl_table=11 FT /gene="sspB" FT /locus_tag="BPP4287" FT /product="stringent starvation protein B" FT /note="ortholog of Bordetella pertussis (BX470248) BP0273" FT /db_xref="HSSP:1OX8" FT /db_xref="InterPro:IPR007481" FT /db_xref="UniProtKB/TrEMBL:Q7W2W4" FT /protein_id="CAE39566.1" FT /translation="MGETSTKPYLIRALHEWCTDNGYTPYITVQVDEHTMVPVAHVRDG FT QITLNVGTLATNKLSLGNEFIEFQARFSGVTENVYVPVGAVSAIYARETGAGIGFEVQA FT YEAPEHADAATPPPESAEAGDAAASPAGDDGDGDEPKRPHLTIVK" FT tRNA 103947..104022 FT /note="tRNA Thr anticodon TGT, Cove score 95.16" FT CDS complement(104074..104388) FT /transl_table=11 FT /locus_tag="BPP4288" FT /product="conserved hypothetical protein" FT /note="Similar to Ralstonia solanacearum hypothetical FT protein Rsc0939 or Rs04472 SWALL:Q8Y0V4 (EMBL:AL646061) FT (104 aa) fasta scores: E(): 1.1e-10, 37.25% id in 102 aa FT and to Vibrio cholerae hypothetical protein Vc1724 FT SWALL:Q9KRB8 (EMBL:AE004250) (103 aa) fasta scores: E(): FT 1.8e-09, 35.92% id in 103 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W2W3" FT /protein_id="CAE39567.1" FT /translation="MMRLMRAPDLMLGQHWVNLLRQAGIACRLTGLYLQGGAGEIPVDQ FT CGPDLWLEDERDREVAMRLIEGPAEAGMRAPWHCDGCGEWLEAQFTTCWQCGAMRPAQV FT " FT CDS complement(104444..105427) FT /transl_table=11 FT /locus_tag="BPP4289" FT /product="putative exported protein" FT /note="Similar to several including: Rhizobium meliloti FT hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 FT (EMBL:AE007292) (330 aa) fasta scores: E(): 1.7e-38, 37.82% FT id in 312 aa and to Comamonas testosteroni OrfJ FT SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): FT 5.4e-35, 36.66% id in 330 aa" FT /db_xref="GOA:Q7W2W2" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W2W2" FT /protein_id="CAE39568.1" FT /translation="MKKLGRLLLLSATAALLAAPAARGQAVDYPQRPITLIVPFEVGGP FT TDILGRIVAETLSAKIGQTVIVENKGGAGGAIGSEAIAKAAPDGYTIGLATISTHVVNP FT SCNKHLRYDPLRSFTPVALLGSMPNILVVRQGFGTPDFAAFRERLKKDSEQYNLGTAGP FT CSFGHVMLEHLNQELGSRIAHVPYRGSGPAASDLLGGSLDMMMDIYPLLGPHIAAGKLT FT ALAVAWPSRLSRLPDTPTFDELGLPDLSTTSWYGLVAPAGLPADRLAVLSRKIGESLQD FT PGLRRRFEEAYIHAAPQESPQAFKDFLAAQFSKESAFIQSRNMGAN" FT misc_feature complement(104456..105283) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.7e-77" FT misc_feature complement(105356..105427) FT /note="Signal peptide predicted for BPP4289 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.632 between residues 24 and 25" FT CDS complement(105464..106414) FT /transl_table=11 FT /locus_tag="BPP4290" FT /product="conserved hypothetical protein" FT /note="Similar to Xylella fastidiosa hypothetical protein FT Xf1745 SWALL:Q9PCN3 (EMBL:AE003997) (338 aa) fasta scores: FT E(): 1.3e-16, 29.28% id in 280 aa, and to Ralstonia FT solanacearum hypothetical signal peptide protein Rsc0206 or FT Rs00638 SWALL:Q8Y2X5 (EMBL:AL646058) (342 aa) fasta scores: FT E(): 1.1e-14, 28.16% id in 284 aa" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7W2W1" FT /protein_id="CAE39569.1" FT /translation="MRSRSARFYSDGLKLAGTLFVPDDYEPGQKRPAVLICHGRFAIKE FT WVPSRWTPHFLAAGYVCMVFDYRNLGESEGTPGRIIPDEEVRDARHALTYLQCQPEVDP FT ARIGALGWGLGGGVAVSAAAHDARIKAVVCAIGVANGGRYGRVGMSDAAWAARQEQIAA FT DRRERVLTGRSARLPRTEILGRPDAQRAERHERQNWIDSLVAAVGPERAADPAKLGIPD FT EITLESMEALYDFAPDAVVDRIAPRPLLIVHARDDHEFPFEHAADMYERAAQPKQLIAV FT EDAGHLDWIDPAHPSQQVYVPQVVAWMQAQLPIDA" FT CDS complement(106433..107314) FT /transl_table=11 FT /locus_tag="BPP4291" FT /product="putative hydrolase" FT /note="Similar to seveal putative hydrolases including: FT Yersinia pestis Ypo1933 SWALL:Q9ZC43 (EMBL:AL031866) (289 FT aa) fasta scores: E(): 4.1e-45, 47.68% id in 281 aa and to FT Pseudomonas paucimobilis 2-pyrone-4,6-dicarboxylic acid FT hydrolase LigI SWALL:O87170 (EMBL:AB015964) (293 aa) fasta FT scores: E(): 2e-24, 35.35% id in 280 aa" FT /db_xref="GOA:Q7W2W0" FT /db_xref="InterPro:IPR006992" FT /db_xref="UniProtKB/TrEMBL:Q7W2W0" FT /protein_id="CAE39570.1" FT /translation="MSAHPVPHAPAAPVCLAPRPAVPPTAVTVPPGAWDCHAHVLGPAD FT LYPMQAERSYTPPDSSAAQYAALLDTLGLRRGVLVQPSVYGTDNRLLAQAVARPEWRGI FT AVLDPAADTRQVAALHAAGVRGFRLNLLFPGGPGLDALERSAALVAPFGWHAQLLVDVR FT ILPGIEHRLARLPVPVVFDHLGHFPYELGTDWPGFHALLRRVAAGRTYVKLSGSYRLSA FT RASHIADVAPIAQALVREAPQRLVWGSDWPHVGRFQDMPATHALLDALALWCPDPAARR FT AILVDTPTQLYS" FT CDS 107403..108326 FT /transl_table=11 FT /locus_tag="BPP4292" FT /product="putative LysR-family transcriptional regulator" FT /note="Similar to many transcriptional regulators FT including: Rhizobium loti nitrogen assimilation control FT protein Mlr6097 SWALL:Q98A96 (EMBL:AP003008) (316 aa) fasta FT scores: E(): 5e-27, 37.13% id in 307 aa and to Escherichia FT coli nitrogen assimilation regulatory protein Nac or b1988 FT SWALL:NAC_ECOLI (SWALL:Q47005) (305 aa) fasta scores: E(): FT 1.2e-22, 31.41% id in 296 aa" FT /db_xref="GOA:Q7W2V9" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W2V9" FT /protein_id="CAE39571.1" FT /translation="MFRISFPQRAMDLQQLNYFVHVGEAGSFSRAAAKLGLTQPTLSRQ FT VSLLEEDLAQRLLERTGRGVIPTAAGLALMPNARALLDLARRTRDELRDLQASPTGRVT FT LGLPPRIARWLTVPLVRAFREQFPRASLSIQEGLSIHLREWLLDGRLDAALLFDPQASP FT QLACETLRQETLLLVGPVDAPPLPAYVDLSTLAELPLIMPAEPNALRVLLDAVLRPHGL FT ALHPVVEVGAAQTLIPLVVQGMGYTVLPEGAVAAYACRSDIQIAPIGPQPIRNSLVLAT FT PLARPADRLATAALDLLRTLAAGPAR" FT misc_feature 107439..107618 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 5.4e-26" FT misc_feature 107481..107573 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 107688..108311 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.9e-36" FT CDS complement(108332..109285) FT /transl_table=11 FT /gene="trxB" FT /locus_tag="BPP4293" FT /product="thioredoxin reductase" FT /EC_number="1.8.1.9" FT /note="Similar to Vibrio cholerae thioredoxin reductase FT TrxB or Vc1182 SWALL:TRXB_VIBCH (SWALL:Q9KSS4) (318 aa) FT fasta scores: E(): 5.6e-78, 64.96% id in 314 aa and to FT Ralstonia solanacearum probable thioredoxin reductase FT oxidoreductase protein TrxB SWALL:Q8XWX8 (EMBL:AL646069) FT (318 aa) fasta scores: E(): 7.5e-82, 69.96% id in 313 aa" FT /db_xref="GOA:Q7W2V8" FT /db_xref="HSSP:1CL0" FT /db_xref="InterPro:IPR013027" FT /db_xref="UniProtKB/TrEMBL:Q7W2V8" FT /protein_id="CAE39572.1" FT /translation="MNPPKHAKVLILGSGPAGYTAAIYAARANLAPLVVTGLAQGGQLM FT TTTDVDNWPADPDGVQGPDLMQRFLRHAQRFDAGVVSDAIHTVRLDRRPFALTGDQGAY FT TCDALVIATGASAKYLGLSSERAFMGKGVSGCATCDGFFYRNRDVLVVGGGNTAVEEAL FT YLSNICRTVTVVHRRDRFRAEPILVDRLQARAALGKVKFEYFHELDEVLGDASGVTGAR FT LRDNRDGTARDVAAKGVFIAIGHAPDTGLFEGQLALRNGYIVTRGGLSGLATMTSIPGV FT FAAGDVQDQIYRQAVTSAGTGCMAALDAQRWLEGAA" FT misc_feature complement(108395..109264) FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreductase, score 4.2e-62" FT misc_feature complement(108818..108880) FT /note="PS00573 Pyridine nucleotide-disulphide FT oxidoreductases class-II active site." FT CDS 109596..110405 FT /transl_table=11 FT /locus_tag="BPP4294" FT /product="putative IclR-family transcriptional regulator" FT /note="Similar to several proposed transcriptional FT regulators including: Bordetella pertussis hypothetical FT 29.0 kDa protein SWALL:O30445 (EMBL:AF006000) (260 aa) FT fasta scores: E(): 9.4e-35, 44.92% id in 256 aa and to FT Brucella abortus putative transcriptional Batn1953 FT SWALL:Q8VQJ7 (EMBL:AF454951) (272 aa) fasta scores: E(): FT 2.2e-20, 35.47% id in 234 aa" FT /db_xref="GOA:Q7W2V7" FT /db_xref="InterPro:IPR005471" FT /db_xref="UniProtKB/TrEMBL:Q7W2V7" FT /protein_id="CAE39573.1" FT /translation="MDQLIDAMETTDRQFATTLQRGLLVLACFDVRQPFLTNKEISART FT GIPSPTVSRLTYTLTLMGYLKHHRHLGKYGKYELGNAVLSLAHPLLANVNVRQVARVPM FT RELAEYAHGWVSLGARERLSMVYLETARARNALDVKPDIGQTFPMLVSAMGRAYLAASQ FT PSERERLMNQLRIYHPELMAEQAEELEHSRADYAAYGFCLSRGDYDRGTWAVAAPMRVP FT ESQELLVFNCAVRVKNRQAEELGLHLIDVVGPRLLDMVDAIRRALED" FT misc_feature 109824..110393 FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator, score 4.9e-07" FT CDS 110473..112155 FT /transl_table=11 FT /locus_tag="BPP4295" FT /product="conserved hypothetical protein" FT /note="Similar to Pseudomonas aeruginosa probable FT thiosulfate sulfurtransferase Pa2603 SWALL:Q9I0N4 FT (EMBL:AE004689) (527 aa) fasta scores: E(): 4.8e-41, 37.87% FT id in 536 aa and to Agrobacterium tumefaciens hypothetical FT protein Atu6089 SWALL:AAL46325 (EMBL:AE009427) (395 aa) FT fasta scores: E(): 2.2e-27, 37.26% id in 314 aa" FT /db_xref="GOA:Q7W2V6" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:Q7W2V6" FT /protein_id="CAE39574.1" FT /translation="MIAGSITDTACMELSTVSELRDLRATSDEYALFDVRESAQAHQGH FT IFGATFLPRRMLAARIASLVPRRSTLIVLYDEGGPDPRARLAAQTLARFGYTGVRVLDG FT GLRTWLAQSEAPCRGSNVPNKWFGETVHAHAATPALPIATLQAWRETGSAHRICDIRSP FT EEYGRARIPGAAGAFGSDLAWHADDLRRAGQPVVVHCSGRTRSIIACESLRLLGVQDAY FT ALENGTMGWRLAGLALERGPGSGSLAASAASRRDGARRTQALARAAGVASVEAAMLARW FT LDERDAGRTNLYVLDIRQVAEYRAGHLPGAIALPGGLAVQRTDEFLPVRAAQVVLVDDD FT EARAALAGYWLRAMGLPRVAVLAGGLPAWNAAGYALGHGRGRPRPADHADAMAARPCPA FT HDVHEAGARMQRVYVDTQARFLAGRPDAAEWVPFGGLEAWLAARAKRQDERAVVLMAHD FT ESLARSAALNARLAGFDAAVLAGGVTAWQAQGLPLASGPGGGVTQAADVVVQPYDAGLQ FT AMRDYLEWEQALTRQAIPTLPLYTAYRVPRPPAADMEQDQEAP" FT misc_feature 110518..110808 FT /note="HMMPfam hit to PF00581, Rhodanese-like domain, score FT 3.7e-11" FT misc_feature 111304..111588 FT /note="HMMPfam hit to PF00581, Rhodanese-like domain, score FT 0.00039" FT misc_feature 111379..111414 FT /note="PS00380 Rhodanese signature 1." FT misc_feature 111490..111531 FT /note="PS00213 Lipocalin signature." FT CDS 112152..112796 FT /transl_table=11 FT /locus_tag="BPP4296" FT /product="hypothetical protein" FT /note="no significant database hits" FT /db_xref="UniProtKB/TrEMBL:Q7W2V5" FT /protein_id="CAE39575.1" FT /translation="MTTQPGTRTARDALLAARNGRIRAMLARVRKIAEPAITRAGLARI FT RDELLALAAERDLFPIEEFPPIEGGNSSMYCLAEDPDHRYALYVVAPAAGGFAPPHDHR FT TWAVIAGMYGREHNKLYRRLDDGSDPDQARLEVSGELDIVAGTAVALMPEDIHSIALGE FT DGPHGSLHLYGMSVEHCHDRRMYSLSKGTSRTFPAATGVVSAHGALRGGLA" FT CDS 112793..114013 FT /transl_table=11 FT /locus_tag="BPP4297" FT /product="putative dehydratase/racemase" FT /note="Similar to Brucella melitensis alpha-methylacyl-CoA FT racemase Bmeii1019 SWALL:Q8YB81 (EMBL:AE009734) (415 aa) FT fasta scores: E(): 3.3e-55, 40.74% id in 405 aa and to FT Agrobacterium tumefaciens L-carnitine dehydratase Caib FT SWALL:AAL43117 (EMBL:AE009163) (397 aa) fasta scores: E(): FT 5e-53, 42.56% id in 390 aa" FT /db_xref="GOA:Q7W2V4" FT /db_xref="HSSP:1PQY" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7W2V4" FT /protein_id="CAE39576.1" FT /translation="MNGARLPLAGIRVIDLSRVLAGPVCGALLGDMGADVIKVEDVEGG FT DESRHWAPQREGHSPVYVANNRNKRSIAVDLKAPEGRDIVAALIDTADVLIENFGTGAM FT ERLGLGYDTLAARNPRLVYCSIAAFGRQGPRADEAGYEALMQAFSGVMSITGEPGRPPV FT RCGVSALDIFTGTLAGFAVSNAILMRQTSGVGQRLDASLFDSAVGLLNFQAQNYLLCGQ FT KPAPMGSAHPSLVPYQCFLCHDHRWIFVAAGNDRLWRRLATAIGQPDLADDPRFLRNID FT RVAHRRELLKLLDGCFASLPLEDALERCRQAGVPAAPVNSVAQALADPQAAQLAALRPM FT AHPDLGEIEVVGLPVAFSAIPAMPCAPAPAHGADTQAILRDLGMDGDTYEALRLRRVLK FT GSPRDGT" FT misc_feature 113006..113575 FT /note="HMMPfam hit to PF02515, CAIB/BAIF family, score FT 6.7e-55" FT CDS 114036..115031 FT /transl_table=11 FT /locus_tag="BPP4298" FT /product="putative lipoprotein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) FT fasta scores: E(): 2.9e-43, 37.34% id in 324 aa and to FT Pseudomonas chlororaphis hypothetical 35.8 kDa protein FT SWALL:Q9L3W5 (EMBL:AJ271325) (336 aa) fasta scores: E(): FT 1.4e-38, 36.06% id in 305 aa" FT /db_xref="GOA:Q7W2V3" FT /db_xref="InterPro:IPR018130" FT /db_xref="UniProtKB/TrEMBL:Q7W2V3" FT /protein_id="CAE39577.1" FT /translation="MSRILQKIYATTAHLGLAAALGLSCTASTAAPANPQGRAVQLVIP FT FAPGGVTDLIARLIQPRLSEALGQTVVISNRPGAGGVVATSYVAKSEPDGHTLFLSWDS FT HTINSIAMKDLPYDIFRDFAPVTLMVRMPLIMGAWGGLPVDNLQGLLELARRNPGKYNF FT ASIGVGSSNRLHAELLNATAGVDIVHVPYAGGGPATTAIRSGEVAYGFFSYGALRNFIQ FT EGRIKPLAVTGAKRLPELPDVPTLQESGFPGFEAYSWVGIYVPAATPAAEIKRLNQAFV FT AVLRDPEIEQKLSKLSVEVVASSPQALRDFERGDYEKWLAFTRQRNMSFD" FT misc_feature 114036..114125 FT /note="Signal peptide predicted for BPP4298 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.754 between residues 30 and 31" FT misc_feature 114078..114110 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 114198..115019 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 4.6e-93" FT CDS complement(115104..116309) FT /transl_table=11 FT /locus_tag="BPP4299" FT /product="putative dehydratase/racemase" FT /note="Similar to many including: Rhodococcus spAD45 FT putative racemase IsoG SWALL:Q9RBP6 (EMBL:AJ249207) (405 FT aa) fasta scores: E(): 2.6e-46, 35.12% id in 410 aa and to FT Streptomyces coelicolor putative dehydratase Sce66.09 FT SWALL:Q9K3T4 (EMBL:AL359989) (391 aa) fasta scores: E(): FT 2.4e-39, 35.26% id in 397 aa" FT /db_xref="GOA:Q7W2V2" FT /db_xref="HSSP:1Q7E" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7W2V2" FT /protein_id="CAE39578.1" FT /translation="MKGPLDGVRIVDLTTVLMGPFATQMLGDMGADVIKIEAPHGDVSR FT QIWPYRHPGMGHMFMNVNRNKRSVVLDLKHAEARKALFALLAGADALIYNIRPRAMARI FT GLSYDEVARHNPRLLYVGAFGYSQRGPYAAKPAYEDLIQGTVGLPHLFQRQGSQWPHYA FT PINLADRTVGLQIVNAVCAGLFCRERTGQGQRIDVPMFEAMLALVMGEHLGGAGFEPPV FT DGLGYNRILTADRRPFATRDGHICVLIYNDKQWQGFCRLIGRPELAADPRYATAASRSQ FT QYSEINGLLASEFAQRDTQDWIAAFEAADIPVQKMNDLQDILDDPHLNAIDYFQEHPHP FT TEGTIRTTAPPVEWSGTPGGYRRHAPRLGEHTLEVLREAGIGQGDIDALLASGAARCAV FT SG" FT misc_feature complement(115536..116105) FT /note="HMMPfam hit to PF02515, CAIB/BAIF family, score FT 1.4e-20" FT CDS complement(116306..116554) FT /transl_table=11 FT /locus_tag="BPP4300" FT /product="putative glutaredoxin" FT /note="Similar to Mycobacterium leprae glutaredoxin FT electron transport component of NrdEF SWALL:Q9CBP8 FT (EMBL:AL583923) (80 aa) fasta scores: E(): 0.00036, 32% id FT in 75 aa and to Corynebacterium ammoniagenes NrdH-redoxin FT SWALL:O69271 (EMBL:Y09572) (75 aa) fasta scores: E(): FT 0.0004, 33.33% id in 72 aa" FT /db_xref="GOA:Q7W2V1" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q7W2V1" FT /protein_id="CAE39579.1" FT /translation="MNMAHDIVVYATPFCAPCERLKKFLQDKQVPFRSVDLMMDEEAAE FT KLEDLGIRSSPVLEVDGRYYHGGQLQPDTLAALLGLP" FT CDS complement(116551..117468) FT /transl_table=11 FT /locus_tag="BPP4301" FT /product="putative reductase" FT /note="Similar to Clostridium sticklandii proline reductase FT PrdB SWALL:Q9Z4Q7 (EMBL:AJ130879) (242 aa) fasta scores: FT E(): 2.9e-11, 26.44% id in 208 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W2V0" FT /protein_id="CAE39580.1" FT /translation="MNMAAHCQEPCMGTPVRYIDKTRDYYLSQGYEKPYQWAQYDDVPF FT TPLGKPLSECRVTLISTSEISIVGDTHPEDETRMGIVGGTYTIPSSLPASQLYSPSRSF FT DQAATTLEDVDAFFPTTHLHAAAQAGRIGGVTERFHGVFNAYSQRRTRERDAPLVLERC FT KEDGADVAILVPVCPVCHQTISLVSRHLEANGIPTVILAAARDIVEHVGVARVVHTDFP FT LGNPCGEPGNAAQQREILEYGFQLLERAFLPRTTVQSPMRWSAGEAWKDLVFTPQQPWK FT SGETEQDWLRKKELYKKLKQEGKV" FT CDS 117827..118702 FT /transl_table=11 FT /locus_tag="BPP4303" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3782" FT /db_xref="GOA:Q7W2U9" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W2U9" FT /protein_id="CAE39581.1" FT /translation="MIVPFPPGGSTDVMARVLARTLQDSLGQPVVVQNRAGAGGVIGTD FT ATAKSAANGYTLLLSSSAPLAVGLSLMPSIPYKVLEDLVPVSMVGDVPLVLVTNPKLKL FT DSLDALIAQCKARPGEVTFALNALGSQAHLLTELFQLRTGAAINMIPYKGSGPAVVDLL FT GGVVAADIENMPAVLEHIRSGSLRALAILSSDRSTHFPAVPTMAELGYPEFVASPWFAV FT MAPKGTDPKIIVLLNRHINEALQSKAVVEAFAAQGATPVIATPDQTRGFIADEIQRWAG FT VVRETGAKLK" FT misc_feature 117866..118690 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 7.1e-101" FT CDS 118979..119788 FT /transl_table=11 FT /gene="ptxA" FT /locus_tag="BPP4304" FT /product="pertussis toxin subunit 1 precursor" FT /EC_number="2.4.2.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3783" FT /db_xref="GOA:Q7W2U8" FT /db_xref="HSSP:1BCP" FT /db_xref="InterPro:IPR003898" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2U8" FT /protein_id="CAE39582.1" FT /translation="MRCTRAIRQTARTGWLTWLAILAVTAPMTSPAWADDPPATVYRYD FT SRPPEDVFQNGFTAWGNNDNVLEHLTGRSCQVGSSNSAFVSTSSSRRYTEVYLEHRMQE FT AVEAERAGRGTGHFIGYIYEIRADNNFYGAASSYFEYVDTYGDNAGRILAGALATYQSE FT YLAHRRIPPENIRTVTRVYHNGITGETTTTEYPNLRYVSQQTRANTNPYTSRRSTASIV FT GTLVRMAPVTGACMARQAESPEAMAAWSERTGEAMVLVYYESIAYSF" FT misc_feature 118979..119080 FT /note="Signal peptide predicted for BPP4304 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 1.000 between residues 34 and 35" FT misc_feature 119084..119782 FT /note="HMMPfam hit to PF02917, Pertussis toxin, subunit 1, FT score 2.9e-167" FT CDS join(119828..120334,120338..120508) FT /pseudo FT /transl_table=11 FT /gene="ptxB" FT /locus_tag="BPP4305" FT /product="pertussis toxin subunit 2 precursor (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP3784" FT /db_xref="PSEUDO:CAE39583.1" FT misc_feature 119828..119908 FT /note="Signal peptide predicted for BPP4305 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.994 between residues 27 and 28" FT misc_feature 119861..119893 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 119867..120175 FT /note="HMMPfam hit to PF03440, Aerolysin/Pertussis toxin FT (APT) domain, score 3.8e-66" FT misc_feature join(120176..120334,120338..120502) FT /note="HMMPfam hit to PF02918, Pertussis toxin, subunit 2 FT and 3, C-terminal domain, score 1.2e-86" FT variation 120335..120337 FT /note="In-frame TGA stop codon in parapertussis; TGG in FT pertussis and bronchiseptica" FT CDS 120502..120960 FT /transl_table=11 FT /gene="ptxD" FT /locus_tag="BPP4306" FT /product="pertussis toxin subunit 4 precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3785" FT /db_xref="GOA:P0A3R6" FT /db_xref="InterPro:IPR015355" FT /db_xref="UniProtKB/Swiss-Prot:P0A3R6" FT /protein_id="CAE39584.1" FT /translation="MLRRFPTRTTAPGQGGARRSRVRALAWLLASGAMTHLSPALADVP FT YVLVKTNMVVTSVAMKPYEVTPTRMLVCGIAAKLGAAASSPDAHVPFCFGKDLKRPGSS FT PMEVMLRAVFMQQRPLRMFLGPKQLTFEGKPALELIRMVECSGKQDCP" FT misc_feature 120502..120627 FT /note="Signal peptide predicted for BPP4306 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.994 between residues 42 and 43" FT CDS 120972..121334 FT /transl_table=11 FT /gene="ptxE" FT /locus_tag="BPP4307" FT /product="pertussis toxin subunit 5 precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3786" FT /db_xref="GOA:Q7W2U7" FT /db_xref="HSSP:1BCP" FT /db_xref="InterPro:IPR015356" FT /db_xref="UniProtKB/TrEMBL:Q7W2U7" FT /protein_id="CAE39585.1" FT /translation="MHTIASILLSVLGIYSPADVAGLPTHLYKNFTVQELALKLKGKNQ FT EFCLTAFMPGRSLVRACLSDAGHEHDTWFDTMLGFAISAYALKSRIALTVEDSPYPGTP FT GDLLELQICPLNGYCE" FT misc_feature 120972..121034 FT /note="Signal peptide predicted for BPP4307 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.981) with cleavage site FT probability 0.784 between residues 21 and 22" FT CDS 121417..122100 FT /transl_table=11 FT /gene="ptxC" FT /locus_tag="BPP4308" FT /product="pertussis toxin subunit 3 precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3787" FT /db_xref="GOA:Q7W2U6" FT /db_xref="HSSP:1BCP" FT /db_xref="InterPro:IPR020063" FT /db_xref="UniProtKB/TrEMBL:Q7W2U6" FT /protein_id="CAE39586.1" FT /translation="MLINNKKLLHHILPILVLALLGMRTAQAVAPGIVIPPKALFTQQG FT GAYGRCPNGTRALTVAELRGNAELQTYLRQITPGWSIYGLYDGTYLGQAYGGIIKDAPP FT GAGFIYRETFCITTMYKTGQPAADHYYSKVTATRLLASTNSRLCAVFVRDGQSVIGACA FT SPYEGRYRDMYDVLRRLLYMIYMSGLAVRVHVSKEEQYYDYEDATFQTYALTGISLCNP FT AASIC" FT misc_feature 121417..121500 FT /note="Signal peptide predicted for BPP4308 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.972 between residues 43 and 44" FT misc_feature 121459..121767 FT /note="HMMPfam hit to PF03440, Aerolysin/Pertussis toxin FT (APT) domain, score 2.5e-65" FT misc_feature 121768..122094 FT /note="HMMPfam hit to PF02918, Pertussis toxin, subunit 2 FT and 3, C-terminal domain, score 8.1e-89" FT CDS 122156..122464 FT /transl_table=11 FT /gene="ptlA" FT /locus_tag="BPP4309" FT /product="pertussis toxin transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3788" FT /db_xref="GOA:Q7W2U5" FT /db_xref="InterPro:IPR007039" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2U5" FT /protein_id="CAE39587.1" FT /translation="MNPLKDLRASLPRLAFMAACTLLSATLPDLAQAGGGLQRVNHFMA FT SIVVVLRGASVATVTIAIIWAGYKLLFRHADVLDVVRVVLAGLLIGASAEIARYLLT" FT misc_feature 122156..122248 FT /note="Signal peptide predicted for BPP4309 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.977 between residues 31 and 32" FT misc_feature join(122198..122266,122285..122353,122396..122458) FT /note="3 probable transmembrane helices predicted for FT BPP4309 by TMHMM2.0 at aa 15-37, 44-66 and 81-101" FT CDS 122483..122797 FT /transl_table=11 FT /gene="ptlB" FT /locus_tag="BPP4310" FT /product="pertussis toxin transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3789" FT /db_xref="GOA:Q7W2U4" FT /db_xref="InterPro:IPR007792" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2U4" FT /protein_id="CAE39588.1" FT /translation="MRDPLFKGCTRPAMLMGVPATPLAVCSGTIALLGIWFSIAFLALF FT PVALLAMRIMIRRDDQQFRLIWLYLRMRWLSRDRTHAFWQSTVYAPLRYAERRRRLRKP FT " FT misc_feature 122567..122635 FT /note="1 probable transmembrane helix predicted for BPP4310 FT by TMHMM2.0 at aa 29-51" FT CDS 122794..125268 FT /transl_table=11 FT /locus_tag="BPP4311" FT /product="putative bacterial secretion system protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3790" FT /db_xref="GOA:Q7W2U3" FT /db_xref="InterPro:IPR018145" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2U3" FT /protein_id="CAE39589.1" FT /translation="MNRRGGQTAFAAIARNERAIAAFIPYSSHLTDTTLITHGADLVRT FT WRVQGIAFESAEPELVSQRHEQLNGLWRAISCEQVALWIHCIRRKTQAGLDARYENPFC FT RALDASYNARLNARQAMTNEFYLTLVYRPGHAALGKRAHHGQAEVRRQLLAHVRRMDEI FT GSLIETTLRSHGENHEQAITVLGCETDSAGRRYSRTLTLLEFLLTGHWQPVRVPAGPVD FT AYLGSSRILAGAEMMELRSPTCRRYAQFIDFKEYGTHTEPGMLNALLYEDYEYVITHSF FT SAVGKRQALAYLQRQRAQLANVQDAAYSQIDDLAHAEDALVNGDFVIGEYHFSMMILGA FT DPRQLRRDVSSAMTRIQERGFLATPVTLALDAAFYAQLPANWAYRPRKAMLTSRNFAGL FT CSFHNFYGGKRDGNPWGPALSLLSTPSGQPFYFNFHHSGLDEDCRGQMMLGNTRIIGQS FT GSGKTVLLNFLLCQLQKFRSADADGLTTIFFDKDRGAEICIRALDGQYLRIRDGEPTGF FT NPLQLPCTDRNVMFLDSLLAMLARAHDSPLTSAQHATLATAVRTVLRMPASLRRMSTLL FT QNITQATSEQRELVRRLGRWCRDDGAGGTGMLWWVFDNPNDCLDFSRPGNYGIDGTAFL FT DNAETRTPISMYLLHRMNEAMDGRRFVYLMDEAWKWIDDPAFAEFAGDQQLTIRKKNGL FT GVFSTQMPSSLLGARVAASLVQQCATEIYLPNPRADRAEYLDGFKCTETEYQLIRSMAE FT DSHLFLVKQGRQAVVAQLDLSGMDDELAILSGNARNLRCFEQALALTRERDPNDWIAVF FT HRLRREASAGLR" FT misc_feature 123325..123954 FT /note="HMMPfam hit to PF03135, CagE, TrbE, VirB family, FT component of type IV transporter system, score 1.3e-62" FT misc_feature 124159..124182 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 125276..126667 FT /transl_table=11 FT /locus_tag="BPP4312" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3791" FT /db_xref="GOA:Q7W2U2" FT /db_xref="InterPro:IPR007688" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2U2" FT /protein_id="CAE39590.1" FT /translation="MAGLSRILLSCTLACLLAGQAAQASVDDPTRAGGDNRVRALRADQ FT ARRDVLLTACRDDPGHRRGEPDCVNAERAQALQQWQAAAMTSVDAAFSDLAGALRNAAP FT RRMEAAIVRLTRQLQPLVYSMMTLLVLLTGYALLARRDRPFEWHIRHALLVAVVTSLAL FT SPDHYLSTVVAGVQDVAGWLSGPWTAPDGAAGRGGLAQLDQFAAQAQAWVAQLAGQAAN FT DANPGSAVNWLLCAMIVATSAGGWLCLAASLLIVPGLIVTLLLSLGPLFLVLLLFPALQ FT RWTNAWLGALVRALVFMALGTPAVGLLSDVLAGALPAGLPQRFATDPLRSTMLAATLCA FT TATLMLLTLVPLASSVNAGLRRRLWPNAAHPGLAQAHRQAAARQYAPRPAAAAAAAGPH FT QAGTYAASATPAPAPARPAPSFPAHAYRQYALGGARRPPPRVRRDDRPAPAPDRRVLPR FT KPNLP" FT misc_feature 125276..125347 FT /note="Signal peptide predicted for BPP4312 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.807 between residues 24 and 25" FT misc_feature join(125624..125692,125957..126025,126038..126106, FT 126143..126211,126269..126337) FT /note="5 probable transmembrane helices predicted for FT BPP4312 by TMHMM2.0 at aa 117-139, 228-250, 255-277, FT 290-312 and 332-354" FT CDS 126664..126849 FT /transl_table=11 FT /locus_tag="BPP4312A" FT /product="putative bacterial secretion system protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3792" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2U1" FT /protein_id="CAE39591.1" FT /translation="MIHAHSNARLLRWAILAIAPVTLGACAPNGPPGLPYPDGKPLIPI FT NTAAPEQGSSCQTRAP" FT CDS 126828..127529 FT /transl_table=11 FT /locus_tag="BPP4313" FT /product="putative bacterial secretion system protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3793" FT /db_xref="GOA:Q7W2U0" FT /db_xref="InterPro:IPR007430" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2U0" FT /protein_id="CAE39592.1" FT /translation="MPDPRPLTPDQTHGRGHAEAAVDWEASRLYRLAQSERRAWTVAWA FT ALAVTALSLIAIATMLPLKTTIPYLIEVEKSSGAASVVTQFEPRDFTPDTLMNQYWLTR FT YVAARERYDWHTIQHDYDYVRLLSAPAVRHDYETSYEAPDAPDRKYGAGTTLAVKILSA FT IDHGKGVGTVRFVRTRRDADGQGAAESSIWVATVAFAYDQPRALTQAQRWLNPLGFAVT FT SYRVDAEAGQP" FT misc_feature 126942..127010 FT /note="1 probable transmembrane helix predicted for BPP4313 FT by TMHMM2.0 at aa 39-61" FT CDS 127526..128347 FT /transl_table=11 FT /locus_tag="BPP4314" FT /product="putative bacterial secretion system protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3794" FT /db_xref="GOA:Q7W2T9" FT /db_xref="InterPro:IPR014148" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2T9" FT /protein_id="CAE39593.1" FT /translation="MMAARMMAAGLAATALSAHAFRIPTPGEQDARIQTVPYHPEEVVL FT VRAWNGYVTRIVFDEQEKIIDVAAGFADGWQFSPEGNVLYIKAKSFPAQGSPAQAPEPG FT LWNTNLLVKTDRRLYDFDLVLASADAATPQALQRSRMAYRLQFRYPAAPQAASRASPVG FT PAVPAGALNRRYAMQVGNGSDGIAPIAAYDDGRHTWLTFRPGQPFPAVFAVAPDGTETL FT VNLHIDNQSLVIHRVAPVLMLRSGASVIRIVNQNGDASASPAFECHAEPAL" FT misc_feature 127526..127585 FT /note="Signal peptide predicted for BPP4314 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.974) with cleavage site FT probability 0.695 between residues 20 and 21" FT CDS 128328..129452 FT /transl_table=11 FT /locus_tag="BPP4315" FT /product="putative bacterial secretion system protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3795" FT /db_xref="GOA:Q7W2T8" FT /db_xref="InterPro:IPR005498" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2T8" FT /protein_id="CAE39594.1" FT /translation="MLNRPSSPDGGEAHAWPPDPEIPVFANAEHAHRRPLRWMFALVAV FT ALSCLLATGIWRSRAAPPHAATQTVAPAGQALPPGRMFTVHPREPEPAPLPDMPAAPNP FT ILPQPRPAPPVPPPPIRAPYDYDEPAPRRDSAALKSGPAMMVATAARLGQTERAGMAED FT GVSADAATLIGRSVSRATRSGGRDYRLLPGTFIDCILQTRIVTNVPGLTTCIVSRDVYS FT ASGKRVLVPRGTTVVGEYRADLAQGSQRIYVAWSRLFMPSGLTIELASPAVDGTGAAGL FT PGVVDDKFAQRFGGALLLSVLGDATSYMLARATDARHGVNVNLTAAGTMNSLAASALNN FT TINIPPTLYKNHGDQIGILVARPLDFSILRGTNE" FT misc_feature 128442..128474 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 129445..130464 FT /transl_table=11 FT /locus_tag="BPP4316" FT /product="putative bacterial secretion system protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3796" FT /db_xref="GOA:Q7W2T7" FT /db_xref="InterPro:IPR001482" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2T7" FT /protein_id="CAE39595.1" FT /translation="MNDAAPDRQASVDFHLQALHPWLSRQDIAEICVNRPGQLWYEDRN FT GWNRQESGALTLDHLHALATATARFCDRDICPERPLLAASLPGGERVQIVVPPACEPGT FT LSLTIRKPARRIWPLSELLRDTLDLPGVPGASQARPDPLLDPWRRGAWDDFLRLAVQAG FT KAILVAGQTGSGKTTLMNALSGEIPPRERIVTIEDVRELRLDPATNHVHLLYGTPTEGR FT TAAVSATELLRAALRMAPTRILLAELRGGEAFDFLQACASGHSGGISTCHAASADMALQ FT RLTLMCMQHPNCQMLPYSTLRALVESVIDIVVVVERRAGQGARRRVVDIWYRDGLPAP" FT misc_feature 129694..130323 FT /note="HMMPfam hit to PF00437, Type II/IV secretion system FT protein, score 8.1e-06" FT misc_feature 129940..129981 FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT misc_feature 129952..129975 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT tRNA 130521..130596 FT /note="tRNA Asn anticodon GTT, Cove score 87.19" FT CDS complement(130670..131704) FT /transl_table=11 FT /locus_tag="BPP4317" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3797" FT /db_xref="GOA:Q7W2T6" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W2T6" FT /protein_id="CAE39596.1" FT /translation="MRPMLRHCPGAGARSRAKKRKIRQSRRPRLAHTCGRRPLRRRPVL FT PTIVNLTLYLLTVLIWGTTWIAIKLQLGVVAIPVSIFYRFALAALIMMAALALLRKLQK FT LDLRGHLLCLGQGLFLFCLNFLCFYAATQWIPSGLVSVVFSAATIWNAVNARLWFGTPI FT APRVMLGGACGLAGLLLLFWPELASHAAEAGTLKGLGLALLGTLCFSTGNMLSAAQQRA FT GIRPLTGNAYSMTYGALILLAGTLAAGVPFAFDPSPTYVGALLFLAVPGSIVGFTAYLT FT LVGRMGPARAAYCTVLFPVVALTISTFVEGYRWTPQALAGLALVMLGNVLVFARWRART FT ARAA" FT misc_feature complement(130703..131086) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 3.8e-10" FT misc_feature complement(join(130706..130762,130778..130834, FT 130856..130921,130952..131017,131057..131107, FT 131153..131203,131225..131290,131306..131371, FT 131411..131476,131507..131572)) FT /note="10 probable transmembrane helices predicted for FT BPP4317 by TMHMM2.0 at aa 44-66, 76-98, 111-133, 138-160, FT 167-184, 199-216, 229-251, 261-283, 290-309 and 314-333" FT misc_feature complement(131156..131530) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 3.8e-14" FT CDS 131805..132596 FT /transl_table=11 FT /locus_tag="BPP4318" FT /product="AraC family regulatory protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3798" FT /db_xref="GOA:Q7W2T5" FT /db_xref="HSSP:1D5Y" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q7W2T5" FT /protein_id="CAE39597.1" FT /translation="MAAAQWRRAGHEVVDYDHPGHHTLSLYLHGGEKSFRVGNDGYGGA FT GKFCVLPSEHRSRWNMNDTVRFLHLYIAPQRLAREAVWRLDCEPRELALRDRTYIQDPA FT LGQACHILLDADWTDPSQRLAASAASETVLHHLLVQGTGRRPGMPARGGLAPVVRRRMR FT DYIEAHLHEPLTLERLAAQAALSTYHFARMFHVSFGVPPHLWVQARRLARAQALLRAPG FT QAGLDAVAQASGFGSASHLSRVFRQATAATPGQYRAGARAH" FT misc_feature 132288..132425 FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family, score 7e-05" FT misc_feature 132432..132563 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 132444..132578 FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family, score 1.5e-07" FT CDS 132679..133053 FT /transl_table=11 FT /locus_tag="BPP4319" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3799" FT /db_xref="InterPro:IPR010652" FT /db_xref="UniProtKB/TrEMBL:Q7W2T4" FT /protein_id="CAE39598.1" FT /translation="MPIATSAYEHAYSDRRFWRKLRGHAAGAGRQALEKALWLYFAVQN FT PATPKWARRVIYGALGYFVLPLDAIPDLAPLVGYTDDLGVMTAALATVAFAITDDVKAQ FT ARGKLDQWLGPAANDAAGNG" FT CDS 133031..134440 FT /transl_table=11 FT /locus_tag="BPP4320" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3800" FT /db_xref="UniProtKB/TrEMBL:Q7W2T3" FT /protein_id="CAE39599.1" FT /translation="MMPPATGSTHRSAVWLAETVRLREEHWGPLEDADAVRQARQLAPD FT FTLRILARAQALGRREGLQDLLVHWRQGAALTFVVLAVAALLAGVGAALGALGSGARPV FT NVLWALGALLGLHALTFVLWLASFALRPRAAGLGGIWLWATRKLARGPDAALIPQALLD FT LLARAGALRWLLGAVSHILWLAALCAALATLLIVLSTASYRFVWATTLLQPETFVTLTQ FT ALGWLPGQLGFALPDAALVRASDGAQVLPATAQVQWSIWLLGALVCYGIAPRLLAALYC FT LAMAARALRGLRLDTSLPGYAVLRDRLLPPAASTGIDRPADPLHAPRMVAAQVLPDLAN FT RPVLAALELAPDQPWPPAGLPANVFDAGNLDTRKQRSALLDALARSAASRLLIACDARQ FT TPDRGTLALLAELSDKAAQTRVWLLQAGAAGAGQGRGSLWQARLLDAGLPEAAILRDAD FT HPLRWLEAAHD" FT misc_feature join(133253..133321,133340..133408,133556..133624, FT 133643..133711,133808..133876) FT /note="5 probable transmembrane helices predicted for FT BPP4320 by TMHMM2.0 at aa 75-97, 104-126, 176-198, 205-227 FT and 260-282" FT CDS 134433..135815 FT /transl_table=11 FT /locus_tag="BPP4321" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3801" FT /db_xref="GOA:Q7W2T2" FT /db_xref="InterPro:IPR002917" FT /db_xref="UniProtKB/TrEMBL:Q7W2T2" FT /protein_id="CAE39600.1" FT /translation="MTEAALRIAVVGHTNTGKTSLLRTLTRNPDFGEVADQPGTTRHVE FT GARLAIDNAAAIEWFDTPGMEDSIALLEYLERLQAPGERLDGPARVRRFLESPEAHRRF FT EQEARVLRKLLECDAGLYVIDARDPVLGKHRDELAILASCARPLLPVLNFVNAPEHRAD FT QWREAMARLGLHAVLEFDTVAPPLDGEAQLYARLAALLDRHAAMLQRLAQALAQQREQR FT RQAACILVADLLVDVAALHVSSPGDEAALQEAAATLREQVRRREQACVDALLALYNFHR FT DDYDGAELPLQGERWGMDLFHPQALKDMGVQLGVGMAAGAMAGAAVDLLSAGLSLGTGM FT LIGAAAGGLWQGVERLGKRVAGKLRGYRELSVDDPIVRLLALRQRQLIHALERRGHAAR FT TPVQLQRPDDRAWQSGPLPDGLKEARSRPEWSALGDRYQEDERRKRVVAQLARQLAQAD FT DA" FT misc_feature 134466..134489 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 135994..137754 FT /transl_table=11 FT /locus_tag="BPP4322" FT /product="putative extracellular solute-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3802" FT /db_xref="GOA:Q7W2T1" FT /db_xref="HSSP:1B52" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q7W2T1" FT /protein_id="CAE39601.1" FT /translation="MLCAPASIAPRRNLPTAFRLTKQYALPRPPYPTTGALSLPAHTAR FT RTRSTRAMRISPFIKHTALALAIAAAGLSATANAKTFRWSYQGDATSMDPMALNETFTL FT GFQGNIYETLAGYDGELKLVPLLAESWENTEPTKWVFKLRKGVKFHDGSPFTADDVIFS FT WKRSLTPGSDMKGYGAKASEIRKIDDHTIEVITATPNPILPREWVFLYIMSKSWSEKNK FT TTEATNVKGDNQGNYANLHTNGTGPFMVTERQPDVKTVLKRFDGYWDKNIKTNIDEVVF FT QPISQEATRVAALISGEMDLVQPVPVQDWKRLDDAPGVRPLTAPEARAIFIGMDQARDE FT LLFSDVKGKNPFKDARVREAVVLAVDTKAINDKIMRGAAKPLGSLIATAINGYDDSFGA FT PIKPDVERAKKLLAEAGYPKGFTVTLDCPNDRYVNDEKVCQAVAGMLARVGIKINLLAQ FT TKSKYFGKILLQAGNQTSMYMLGWTPSSIDAHNALLNLAACRDAKTAAGQFNLGGYCNK FT KVDELTAQIGVETDQAKRNAMIKEAFEIVRKEYGYLPLHQQPMSWGVKDNIKLIQRADD FT VLDLRNVVMP" FT misc_feature 136177..137748 FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5, score 1.3e-46" FT CDS 137790..138803 FT /transl_table=11 FT /locus_tag="BPP4323" FT /product="putative transport system permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3803" FT /db_xref="GOA:Q7W2T0" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2T0" FT /protein_id="CAE39602.1" FT /translation="MGDPRRTRQTRAPDMLAFIARRLFQSLLVMLTVALIAFSMFRYVG FT DPIASMVGQDTTPQQRAQLRVDLGLDDPFVVQFARFVGNAVQGDFGISYRQPRPVAELL FT EERLPATLELSFVSALMALVFGIPMGIYTALRRHGVLSKTFMALSLAGISLPTFLIGIL FT LILVFGVQLRWLPSFGRGEVISLGWWSTGLLTRSGLAALIMPAITLALFQMTLIMHLVR FT AEMLEVLRTDFIKFARARGLPERLINFRHALKNTLVPVITITGLQLGSIIAFAIITETV FT FQWPGMGLLFIQAISMVDIPVMAAYLVLIAFFFVVINLIVDMLYFAVDPRLRVQSK" FT misc_feature join(137856..137924,138135..138194,138231..138299, FT 138384..138452,138552..138620,138705..138773) FT /note="6 probable transmembrane helices predicted for FT BPP4323 by TMHMM2.0 at aa 23-45, 116-135, 148-170, 199-221, FT 255-277 and 306-328" FT misc_feature 138462..138677 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 5.1e-05" FT CDS 138814..139740 FT /transl_table=11 FT /locus_tag="BPP4324" FT /product="putative transport system permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3804" FT /db_xref="GOA:Q7W2S9" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2S9" FT /protein_id="CAE39603.1" FT /translation="MIARLAPYFARASDSDLWHSFKRSPGAIISAVVTLIIVLGALAAP FT LVAPHNPFDLASLNIMDANTPPAWEADGNSAFVLGTDDQGRDILSAILYGSRVSLLVGF FT ASVLFAMVLGVTLGLISGYAGGRVDSIIMRIADVQLSFPAILVALLIDGVARGLLPRDM FT HDKLALYVLIFAIGISGWVQYARTVRGSTLVERNKEYVQAARLIGIGPFTILRRHILPN FT VMGPVLVIATIHLAIAIITEATLSFLGVGVPPTAPSLGTLIRIGNSYLFSGMWWISIFP FT GIALVALVLSVNLLGDWLRDALNPKLR" FT misc_feature 138814..138942 FT /note="Signal peptide predicted for BPP4324 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.798) with cleavage site FT probability 0.797 between residues 43 and 44" FT misc_feature join(138889..138957,139114..139182,139201..139269, FT 139312..139365,139468..139536,139633..139701) FT /note="6 probable transmembrane helices predicted for FT BPP4324 by TMHMM2.0 at aa 26-48, 101-123, 130-152, 167-184, FT 219-241 and 274-296" FT misc_feature 139387..139617 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.9e-06" FT misc_feature 139390..139476 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 139748..141469 FT /transl_table=11 FT /locus_tag="BPP4325" FT /product="probable ABC transporter, ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) FT BP3805+BP0167" FT /db_xref="GOA:Q7W2S8" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2S8" FT /protein_id="CAE39604.1" FT /translation="MALLDIDSIRIEFPSRRGTLVAVDGVSLSLEKGEILGVVGESGAG FT KSTIGNAVIGLLEAPGRLAGGEVLLEGRRIDTLSNAEQRKVRGRRIGMIFQDPLTSLDP FT LQTVESQLVETMQVHLDLNHEQARQRAVELLRQVGIDEPELRVKQYPHQFSGGMRQRVV FT IALALSCGPEVIIADEPTTALDVSIQAQILDLLRKLCREKQVGMIIITHDMGVIADVTD FT RVAVLYRGKLVEQGPTAKILGNPDHPYTRSLISAVPRPDVKLRRFPVVTYIEDVKRPTV FT ELDIATHWLGQRREFARRAAGPLVEVEDLGMRFVLRNAFLARNRRTLDAVKQVNLSINE FT GEVFGLVGESGSGKSTVARLIAGLYTPTNGRVLFNGVDLTGLKDEKRMNAFRRQIQMVF FT QDPYSSLNPRMRVQEIVAEPIRFHRLAEGEAQTRRVVADLLDVVGLGASAAQRYPHEFS FT GGQRQRICIARALATRPRFLICDEPTSALDVSIQAQILNLLKDLQEQLGLTMLFISHDL FT PVIRQMCDRVGVMLHGQLLETAATETLFTHPEHDYTRHLLSLMPRLQSLQPVPSAG" FT misc_feature 139844..140437 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.7e-58" FT misc_feature 139865..139888 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 140207..140251 FT /note="PS00211 ABC transporters family signature." FT misc_feature 140768..141346 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.6e-69" FT misc_feature 140789..140812 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 141116..141160 FT /note="PS00211 ABC transporters family signature." FT CDS complement(141476..142294) FT /transl_table=11 FT /locus_tag="BPP4326" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0168" FT /db_xref="InterPro:IPR007621" FT /db_xref="UniProtKB/TrEMBL:Q7W2S7" FT /protein_id="CAE39605.1" FT /translation="MPEFGARVVDQSGVLDAAQRQRLEAQLAALEQRKGAQVAVLIVPS FT TAPETIEQYATRAFEKWKIGRDKVDDGVLLLMASDDRALRIEVGYGLEGAIPDSAAGRI FT INEYIVPRLRAGDWPGAVQAGVTALERRIEGEELPPPAASGRDEGSRLAGIRGWLGENG FT IAALVVLLILPGPIAAALAGVGVAIYMQSISAGLAMALLVLGIKVIIKALPSGGGGGGG FT GGGGSGGGGFGGWRGGSRGGSGSGSGSGGFGGFRGGGGGRSGGGGASGRW" FT misc_feature complement(join(141650..141715,141737..141802)) FT /note="2 probable transmembrane helices predicted for FT BPP4326 by TMHMM2.0 at aa 164-186 and 193-215" FT CDS complement(142380..143009) FT /transl_table=11 FT /locus_tag="BPP4327" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0169" FT /db_xref="InterPro:IPR007156" FT /db_xref="UniProtKB/TrEMBL:Q7W2S6" FT /protein_id="CAE39606.1" FT /translation="MTITRWLGAGLLALLTTLLSGCGYNAIQAADEQVKASWSQVLNQY FT QRRADLVPRLVKVVDAYMTHERQVLVEVTEARAKVGRVQLTADQLDDPAAVQRFQQAQG FT ELSSALSRLLVVTENYPQLKAEGLFRDLQTELAGTENRLAVERERYVRSVQAYNVLVRQ FT FPEVITAKVFGYAPKANFGVDNEAEITRAPKVKFSNEGGSAPRPAQ" FT misc_feature complement(142923..142988) FT /note="1 probable transmembrane helix predicted for BPP4327 FT by TMHMM2.0 at aa 7-29" FT misc_feature complement(142923..143009) FT /note="Signal peptide predicted for BPP4327 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.770 between residues 29 and 30" FT misc_feature complement(142944..142976) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 143340..144785 FT /transl_table=11 FT /gene="rhlE" FT /locus_tag="BPP4328" FT /product="putative ATP-dependent RNA helicase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0170" FT /db_xref="GOA:Q7W2S5" FT /db_xref="HSSP:1HV8" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:Q7W2S5" FT /protein_id="CAE39607.1" FT /translation="MRAIADTGYTAPTPIQAQAIPLVLQGGDLLAAAQTGTGKTAGFTL FT PILHRLMQTKPAARKPGRPRCLILTPTRELTAQVAESVQTYGKYASLSSMVMFGGVNIN FT PQISALKKPLDILVATPGRLLDHAGQKTVDLSGVEILVLDEADRMLDMGFIRDIRKVLA FT LLPKQRQNLLFSATFSDEIRSLARGVLNDPGEVSVTPRNTATELVTQTVHLVEQHHKRD FT LVSHLIRESGWHQVLVFTRTKHGANRLAEKLVKDGLSAAAIHGNKSQSARTRALSGFKD FT GSVAVLVATDIAARGLDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGATGAAVSLVDDS FT EIKLLKAIERLIKKPIERRAVDGWTPPAGGPTAEDRADREREMRDDDRGRGRRGDRGGD FT RGQRAGGDNRAPQARDGQRRATGAHPQGSAPRNAAGPRADAKRNDAGRPQGRAPGETGA FT ARAPAPARDRPVGNGTRGVLLGK" FT misc_feature 143343..143972 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase, FT score 8e-79" FT misc_feature 143436..143459 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 143763..143789 FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT misc_feature 144108..144323 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 2.7e-29" FT CDS 144819..145448 FT /transl_table=11 FT /locus_tag="BPP4329" FT /product="LysE family efflux protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0171" FT /db_xref="GOA:Q7W2S4" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/TrEMBL:Q7W2S4" FT /protein_id="CAE39608.1" FT /translation="MTLSTWLTFFVASWAISFSPGAGAISAMSSGLKYGFARGYWNTAG FT LILGILFQFLIVAVGLGAVLATSELAFTLVKYAGVVYLIYLGMRQIRTDAAPVTVDAGD FT PHRASIRELVGRGFLINTMNPKGTVFLLAVVPQFVDPAQPLTQQYLALAGTLAFTDLVA FT MGVYTLLAAKVLRMLRKAHHIRWMNRVFGSLFILAGVFLATFRRHS" FT misc_feature 144819..144890 FT /note="Signal peptide predicted for BPP4329 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.990) with cleavage site FT probability 0.432 between residues 24 and 25" FT misc_feature join(144846..144914,144948..145016,145026..145079, FT 145167..145235,145263..145331,145368..145436) FT /note="6 probable transmembrane helices predicted for FT BPP4329 by TMHMM2.0 at aa 10-32, 44-66, 70-87, 117-139, FT 149-171 and 184-206" FT misc_feature 145023..145343 FT /note="HMMPfam hit to PF01810, LysE type translocator, FT score 2.2e-15" FT CDS 145497..147104 FT /transl_table=11 FT /gene="prfC" FT /gene_synonym="tos" FT /gene_synonym="miaD" FT /locus_tag="BPP4330" FT /product="peptide chain release factor 3" FT /note="ortholog of Bordetella pertussis (BX470248) BP0172" FT /db_xref="GOA:Q7W2S3" FT /db_xref="InterPro:IPR004161" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2S3" FT /protein_id="CAE39609.1" FT /translation="MNIPQEVARRRTFAIISHPDAGKTTLTEKLLLFAGAIQIAGSVKA FT RKASRHASSDWMEIEKQRGISVASSVMQMEYRDCVINLLDTPGHQDFSEDTYRVLTAVD FT AALMVIDAANGVEPQTIRLLQVCRARNTPIITFINKLDREVREPLELLSEIEGHLGMDT FT VPFSWPVGMGKAFGGVFDIRRNRMRIFRAGQERRGEDDEFIDGLDNPEIPRRFGAAFAQ FT ASGEIELINEAAPAFDREAFLAGKQTPVFFGSAINNFGVQEVLDALVDQAPAPGPRQAL FT EREVRPDEPKFTGVVFKVQANMDPAHRDRVAFVRVSSGRFERGMRLKVARTGKEMRPNN FT VVSFLSQRRELLDEAYASDVIGIPNHGVLQLGDVLTEGESLRFTGLPFFAPELFQAVEV FT KDPLRTKQLRVGLTQLGEEGAIQVFRPEAAGGALLLGAVGQLQFEVVAHRLKTEYGVDA FT RMMPSRYTSARWITSDDPRALRKFMDANAAHIAYDVVDAAAFLITSPAQLRVAEDLYPN FT VKFHALREHGGKVFGDKA" FT misc_feature 145518..146324 FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 1.8e-60" FT misc_feature 145659..145706 FT /note="PS00301 GTP-binding elongation factors signature." FT misc_feature 146376..146624 FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain FT 2, score 7.5e-12" FT CDS 147129..147812 FT /transl_table=11 FT /locus_tag="BPP4331" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0173" FT /db_xref="UniProtKB/TrEMBL:Q7W2S2" FT /protein_id="CAE39610.1" FT /translation="MRVAMSWRLLIATLLVALGAAAWGGIQLGDWLVAHAPQAAPAPGQ FT EGDTSQQPVLDANGRPYVAQPPQPRVDGTLGVPDQPASRDWAVNTVSLFDTTGDPAVQI FT SRDSITMDRAREIAANSDVPLPSGNSDITTLDLQALGGQAPIVPQEAIPASGMQQNPAA FT VAQVAPQTNRAGGGNWQDALRRELAHCATQGFFERPSCSWAARNKYCAPNRAWGTMAEC FT PRRPD" FT misc_feature 147129..147200 FT /note="Signal peptide predicted for BPP4331 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.746 between residues 24 and 25" FT misc_feature 147147..147206 FT /note="1 probable transmembrane helix predicted for BPP4331 FT by TMHMM2.0 at aa 7-26" FT CDS complement(147894..148370) FT /transl_table=11 FT /gene="bfr" FT /locus_tag="BPP4332" FT /product="bacterioferritin" FT /note="ortholog of Bordetella pertussis (BX470248) BP0174" FT /db_xref="GOA:Q7W2S1" FT /db_xref="HSSP:1BFR" FT /db_xref="InterPro:IPR009040" FT /db_xref="UniProtKB/TrEMBL:Q7W2S1" FT /protein_id="CAE39611.1" FT /translation="MKGDKTVIQFLNKQLTNELTAINQYFLHARMLRHWGFNKLGKHEY FT EESIGEMKHADRLIERIFMLDGLPNLQDLHKLLIGEDVPELLACDLKLEQAAQATVKEA FT IAHCESVRDYVSRDLFQDILDDTEEHIDYLETQIGLVDQVGLQNYLQSQMEVDG" FT misc_feature complement(147909..148370) FT /note="HMMPfam hit to PF01334, , score 1.5e-96" FT CDS complement(148709..149638) FT /transl_table=11 FT /locus_tag="BPP4333" FT /product="putative integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0136" FT /db_xref="GOA:Q7W2S0" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W2S0" FT /protein_id="CAE39612.1" FT /translation="MKTTSAAAAAGAWRGAPDRAATPWGAIAVFCLLWSSAFAAAKIAV FT HDGPPLVLLSARFLLAGVLLLAVARLGAGWRPPAPRELAVLALLGVLNNALYLGLSWTG FT LTTVSSAFMAVLISTNPLLIGILAGPVLGERLGWRKLAGLCLGLLGVALVLRSRLSGMH FT EDLHGALLAGGALLALVAGTLLYKRMAPAAGLWTATGVQSLAGGLALLPVALSLESVAD FT VRLTAGLVGSMAYMVVAVSMGGYYLWFLILGRASATSASALHFLMPPLGLLFGWALLGE FT PVSRLDLLGIVPIALGIWLATRRGRAPG" FT misc_feature complement(148730..149110) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 1.6e-14" FT misc_feature complement(join(148733..148789,148802..148867, FT 148883..148948,148994..149059,149081..149131, FT 149162..149218,149240..149305,149321..149386, FT 149423..149488,149519..149575)) FT /note="10 probable transmembrane helices predicted for FT BPP4333 by TMHMM2.0 at aa 21-40, 50-72, 84-106, 111-133, FT 140-159, 169-186, 193-215, 230-252, 257-279 and 283-302" FT misc_feature complement(149171..149545) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 3.5e-22" FT misc_feature complement(149579..149638) FT /note="Signal peptide predicted for BPP4333 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.983) with cleavage site FT probability 0.774 between residues 20 and 21" FT CDS 149746..150624 FT /transl_table=11 FT /locus_tag="BPP4334" FT /product="probable LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0135" FT /db_xref="GOA:Q7W2R9" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W2R9" FT /protein_id="CAE39613.1" FT /translation="MHFPERTAVDLDLLHSFVSVVDAGGFTRAGERVHRTQSTVSQQIR FT KLEDALGCALFIREGRGVRLTEDGERLLGYARRMLALSNEIREVVSGERRLEVVRLGLP FT DDLAVTRLTHMVADFARRHPQVRLSMRCDLSANLHRAQARGELDLVLLKREPGAGPSRA FT AWPERLHWLCAAGGPATLPDPIALVAFPQGCQYRNRAIHALESAGRRWRIAYESPNLSG FT LQAAVEGGLGVALLEQRCQTPAMARCDALLPRPAPSELALCMSDTGSRAVHELARLIMD FT FCGDDKLRQAA" FT misc_feature 149776..149955 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2.4e-26" FT misc_feature 149818..149910 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 150019..150597 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 4.8e-24" FT misc_feature 150343..150396 FT /note="PS00216 Sugar transport proteins signature 1." FT CDS complement(150652..150954) FT /transl_table=11 FT /locus_tag="BPP4335" FT /product="putative bacterioferritin-associated ferredoxin" FT /note="ortholog of Bordetella pertussis (BX470248) BP0134" FT /db_xref="InterPro:IPR007419" FT /db_xref="UniProtKB/TrEMBL:Q7W2R8" FT /protein_id="CAE39614.1" FT /translation="MPIIVLMYICICNAVTERQVRACVDAGAATLGDLQFELGVATCCG FT CCAATATEYLPGGRASSVCEVRSVAVPVNPPAALEPVGTPQPAANGFPIPLVAVA" FT CDS complement(151047..152486) FT /transl_table=11 FT /gene="rpoN" FT /gene_synonym="glnF" FT /gene_synonym="ntrA" FT /locus_tag="BPP4336" FT /product="RNA polymerase sigma-54 factor" FT /note="ortholog of Bordetella pertussis (BX470248) BP0133" FT /db_xref="GOA:Q7W2R7" FT /db_xref="InterPro:IPR007634" FT /db_xref="UniProtKB/TrEMBL:Q7W2R7" FT /protein_id="CAE39615.1" FT /translation="MQNIVPMTRPALELRPGQHLTLTPQLQQSIRLLQLSSLELEAELS FT QALAENPLLERDEDPAREEQADPEREASVEADEAPDTELRLDEMPGSGGVLPDDDSDLP FT QAARPDTLREHLLGQLALTRAAPRGAALCGLLIDELDENGYLDSPLEEILTWLPAEAQA FT DLDELRAALALLQSFDPAGIGARDMAECLQLQLRQPDPARLPEAADAEVLACARRICAQ FT HLPLLATGNVARVREAVQCDEAVVRAAHALILRLEPRPGRAWTVPAADYAIPDVIVRRT FT RQGWQAVLNSAVVPRLHVNAVYAQVLGGQRQGGNAGLQAQLQQARWMIRNVEQRFDTIL FT RVAQAIVAHQQAFFTQGPAAMRPLILKDIAGELDLHESTISRATTQKYMLTPFGTLELK FT RFFGAGVSTDGGDATSATAVQAVIRQMVADEDRAKPLSDSQIMQRLADQGIVIARRTVA FT KYREALRIAPATLRKAHAAGR" FT misc_feature complement(151065..152468) FT /note="HMMPfam hit to PF00309, Sigma-54 factors family, FT score 9.2e-177" FT misc_feature complement(151104..151127) FT /note="PS00718 Sigma-54 factors family signature 2." FT misc_feature complement(151341..151400) FT /note="PS00717 Sigma-54 factors family signature 1." FT CDS 152485..153132 FT /transl_table=11 FT /locus_tag="BPP4337" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0132" FT /db_xref="UniProtKB/TrEMBL:Q7W2R6" FT /protein_id="CAE39616.1" FT /translation="MMNPTSPERIRQDGRLIGQALLKLALPRLIFRIVVVAIAAVIWLL FT VAAWLLAFGKSLSFEGMHALGQQTVDMLTRVNPYFWWGVVAIWSLIVFFSIRAWLGSSI FT AAGRAAVVPTDVLSDLAPRLSPEVLDVLRWVWGEREEPLTVGDSQRAHTELRHNRIGKI FT ALVREQSGILDAPAHRPGPDERPGAARHAEPRITEPRAVEPRLAEPHIGPAR" FT misc_feature join(152569..152637,152719..152787) FT /note="2 probable transmembrane helices predicted for FT BPP4337 by TMHMM2.0 at aa 29-51 and 79-101" FT CDS 153559..155265 FT /transl_table=11 FT /gene="leuA" FT /locus_tag="BPP4338" FT /product="2-isopropylmalate synthase" FT /EC_number="2.3.3.13" FT /note="ortholog of Bordetella pertussis (BX470248) BP0131" FT /db_xref="GOA:Q7W2R5" FT /db_xref="InterPro:IPR000891" FT /db_xref="UniProtKB/TrEMBL:Q7W2R5" FT /protein_id="CAE39617.1" FT /translation="MMLANPATKYVPFQPFARDFAERTWPSRRITQPPIWMSTDLRDGN FT QSLIEPMSVERKVRFFEQLVKIGFKEIEVGFPSASQTDFDFVRKLIDEKRIPDDVTIIV FT LTQSREDLISRTVEAAAGARQAMIHLYNACAPAFRKIVFNMSRDEIKNIAVTGTRMVKQ FT YMAKYPQTQWRYEYSPEVFSTTEPEFALDVSNAVADEWYATPQRKMVLNLPATIEATSP FT NMYADQIEWMHKNLARRDSIVLSVHPHNDRGTAVAAAEFAVMAGADRIEGCLFGSGERT FT GNVDLVTLALNLYTQGVHPGLDFSDIDEVRRCAEYCNQLPVHPRHPYAGDLVFTAFSGS FT HQDAIKKGFAQQQADAPWEVPYLPIDPADLGRSYDAVIRVNSQSGKGGVSYLLEQEHGL FT VLPRRLQIEFSRAIQRVTDETGREVSSDDVYTIFDSEYLAQQQPWQLVRHRIDGDPSAG FT EGKHFSIEAELSFNGERRIVKGSGDGAISAFVAALDVPVRIMDYHEHAIGTGTDTRAAC FT YVEVRVGDSPTGFGVGIDRDIVTASFKAVLGAVNRHHVAATQATETEAVAA" FT misc_feature 153676..154548 FT /note="HMMPfam hit to PF00682, HMGL-like, score 8.1e-95" FT misc_feature 153679..153729 FT /note="PS00815 Alpha-isopropylmalate and homocitrate FT synthases signature 1." FT misc_feature 154288..154329 FT /note="PS00816 Alpha-isopropylmalate and homocitrate FT synthases signature 2." FT CDS complement(155406..156671) FT /transl_table=11 FT /locus_tag="BPP4339" FT /product="amidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0130" FT /db_xref="GOA:Q7W2R4" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q7W2R4" FT /protein_id="CAE39618.1" FT /translation="MGKAMNLNRISASEAARLLNRRDLTAEQLARACLARIEQREPEVQ FT AWTALRPDAVLAAARELDRGPIRGVLHGLPLGVKDMFDTADLPTAYGSGIYQSHQPRAD FT AAAVALCRDAGALVLGKTATTEFATYHPGPTRNPRNTAYTPGGSSSGSAAAVAGDMVPL FT ALGTQTAGSVIRPAAYCGVVGYKPSFGRISRAGLKSLAETLDTVGMFARSVDDVALLAS FT VLMRDARLRELRYDGTPRVAMFRSPQWRHTLPETRAAFERAARALSQAGAVVEELAPLH FT SDVMAYEAAQALAFERIHYPSQLSTKLAAMLEAGAALTAEQYLAHLAQAGQARAKVAEW FT LQRYDVLLAPSATGEAPFYDQGTGDPLFCRAWTLFGVPCVHLPFAQGPQGLPVGLQVVG FT GFRDDQRLLAIARWMNGVLAAD" FT misc_feature complement(155448..156590) FT /note="HMMPfam hit to PF01425, Amidase, score 1.5e-86" FT misc_feature complement(156306..156329) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 156927..157964 FT /transl_table=11 FT /locus_tag="BPP4340" FT /product="probable LacI-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0129" FT /db_xref="GOA:Q7W2R3" FT /db_xref="HSSP:1CJG" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:Q7W2R3" FT /protein_id="CAE39619.1" FT /translation="MSRKPPGRPSIIEIARKAGVSPATVSRAFNQPALLKPDTLAHIEA FT VAQRSGFRPNRVGRSLRAGRSRTIGLLLPTLTNPVFADCFEGAEQYARRAGYSVMMATT FT NYQPAIEADAVQALIDHQIDDLILTVGNPARNATLQALEQAQVPHVLAYNESGSHPFVS FT VDNRAAARDMVQRLADLGHRRIALVTGPLAASDRARRRLEGARAAARTLGLEPVAHLAM FT PTHTASNLSTLQQAVQAAHAPTALFCSNDLLATAVIAHLVELGLRVPRDISVCGFDGVA FT IGALMVPTLCTVAQPSRDIGAAACARLLAHMEQGVPIESARLPYRIFPGGTVAAAPRPE FT EEPSP" FT misc_feature 156945..157028 FT /note="HMMPfam hit to PF00356, Bacterial regulatory FT proteins, lacI family, score 2.7e-05" FT misc_feature 157122..157934 FT /note="HMMPfam hit to PF00532, Periplasmic binding proteins FT and sugar binding domain of the LacI family, score 2.1e-15" FT CDS 157961..158971 FT /transl_table=11 FT /locus_tag="BPP4341" FT /product="probable periplasmic solute-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0128" FT /db_xref="GOA:Q7W2R2" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q7W2R2" FT /protein_id="CAE39620.1" FT /translation="MKRIIQAALRGTLLALAIGAGAAQAQNAICYNCPPEWADWATQLK FT AIKEATGITVPGDNKNSGQALASIAAEKANPVADVVYYGVTFGIQADKDGLVQSYKPAH FT WDAIPDGMKDPDGKWFAIHSGTLGFMVNVDALRGKPVPKSWADLQKPEYRGMVGYLDPA FT SAFVGYVGAVALNRALGGTLDNFDPAIDWFKKMRANRPIVPKQTAYARVLSGEIPILID FT YDFNAYRAKYKDEANVDFVIPAEGTIAVPYVMSLVANAPHADNGRKVLDFTLSERGQAI FT WANAFLRPVRAEAISAEAQKKFLPASEYARAGTVDYVKMSAAQRGFSERYAKEVN" FT misc_feature 157961..158035 FT /note="Signal peptide predicted for BPP4341 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.996 between residues 25 and 26" FT misc_feature 158054..158956 FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding protein, score 0.00091" FT CDS 158973..159788 FT /transl_table=11 FT /locus_tag="BPP4342" FT /product="probable Binding-protein-dependent transport FT system, permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0127" FT /db_xref="GOA:Q7U368" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7U368" FT /protein_id="CAE39621.1" FT /translation="MQRRGWLLFAAPAAALFLAFWLRPMASLALTGATVEEGHSAYYIV FT VTSPQYWRSLFNTVALSLVATLATLLLSLPIGRFLAWHREFPGRRALVALLMFPLAFPG FT VVVGFLIILLAGRQGVIGSLTEWMTGEPMVFAYGMGGLFLGYLYFSLPRTIGMISAAAQ FT QIDVSLLEAARTLGARPWRRFVDIELPALTPALLGAGAMSFATSMGAFGTAFTLATQID FT VLPLTIYNEFTNYANIPVAAALSIVLGLATWAVLYAAHSLAGARAGAGA" FT misc_feature 158973..159059 FT /note="Signal peptide predicted for BPP4342 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.688 between residues 29 and 30" FT misc_feature join(158985..159038,159144..159212,159246..159314, FT 159357..159425,159558..159626,159684..159752) FT /note="6 probable transmembrane helices predicted for FT BPP4342 by TMHMM2.0 at aa 5-22, 58-80, 92-114, 129-151, FT 196-218 and 238-260" FT misc_feature 159453..159671 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.3e-08" FT CDS 159785..160633 FT /transl_table=11 FT /locus_tag="BPP4343" FT /product="ABC transporter, permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0126" FT /db_xref="GOA:Q7W2R1" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2R1" FT /protein_id="CAE39622.1" FT /translation="MREAGMSAMYSKTDARLGLTVTLAVAAFLIGPVVLSVLAGLTRNY FT FVGLESGLTLRWVIEVWDLYADTIWRSFAVALLTLLVCTLTGVPAAWVLTLHHGRMARA FT LEELLTLPVAVPGLASALALIVSWGTVSGLRGSIWFIVIGHVLFTLPFMVRATRASMAG FT ADLATLDEAAATLGASRLRRFLTVVVPNAAPGIVTGALTVLTLSIGEFNLTWLLHTPLT FT KTLPVGLADSYASMRLEIASAYTLVFLLMLMPLLVGLQWLADRGERHAANAPITNEKTA FT T" FT misc_feature join(159833..159901,160004..160072,160109..160177, FT 160190..160246,160343..160411,160502..160570) FT /note="6 probable transmembrane helices predicted for FT BPP4343 by TMHMM2.0 at aa 17-39, 74-96, 109-131, 136-154, FT 187-209 and 240-262" FT misc_feature 160262..160486 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 6.3e-09" FT CDS 160630..161613 FT /transl_table=11 FT /locus_tag="BPP4344" FT /product="probable ABC transporter, ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0125" FT /db_xref="GOA:Q7W2R0" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2R0" FT /protein_id="CAE39623.1" FT /translation="MSASVSITLENCAKTWPDGSRALQALDLHIPGGEILALLGPSGCG FT KTTLLRLICGLEQPDAGTRILYGDEDVTALAPEARGVGVVFQSYALFPNMTVADNVGYG FT LRVRGMAEAARTARVRQMLELVQLQALAGRRISQLSGGQRQRVALARALAIEPRVLLLD FT EPLTALDAKLREHLRVELAQMLRGLDITTIIVTHDQDEAMMLGDRIAVMSAGRLEQIGH FT AETLYREPATDFVGEFLGTLCRVRAATRDGLLVAGDEPLAFRPHHARLQAPCDGALHAR FT VLARFFLGGSVRYEIGLDDGQQFAAIAAPDSTYQTGQSVSVVLAAH" FT misc_feature 160726..161274 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 4.1e-67" FT misc_feature 160747..160770 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 161044..161088 FT /note="PS00211 ABC transporters family signature." FT CDS 161636..162457 FT /transl_table=11 FT /locus_tag="BPP4345" FT /product="putative cAMP phosphodiesterase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0123" FT /db_xref="GOA:Q7W2Q9" FT /db_xref="InterPro:IPR004843" FT /db_xref="UniProtKB/TrEMBL:Q7W2Q9" FT /protein_id="CAE39624.1" FT /translation="MLIAQISDLHIRMPGQKAYRVVETDRYLPPAVAALNRLEPAPDLV FT IVSGDLTDFGRPQEYTHLKQMLDALRAPYHVLPGNHDDRVQLAATFADHPYLREAGEFV FT QYTIEDQPLRFIVLDTVVPQQSHGALCERRLQWLAQRLAEQPGRPTVIVMHHPPFRTGI FT AHMDAIGLLAGAPELEALVARHSNVERIMCGHLHRTIFQRFGGTIASTCPSPAHQVALD FT LRPDGPSAFVMEPPGFHLHEWRDGALVTHHAYIESYPGPYPFHEGGELIDE" FT misc_feature 161636..162232 FT /note="HMMPfam hit to PF00149, Calcineurin-like FT phosphoesterase, score 2.7e-17" FT CDS 162563..163603 FT /transl_table=11 FT /locus_tag="BPP4346" FT /product="sugar ABC transporter, ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0122" FT /db_xref="GOA:Q7W2Q8" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2Q8" FT /protein_id="CAE39625.1" FT /translation="MSHLVLDDLTKQYGEAAAISGVSFTAPAGSFTVLLGPSGCGKSTT FT LRMIAGLDTPTSGRIRIGDRDVTDLPPAKRRISMVFQSYALFPHLSVRENILFGLKVRK FT EPARDYERRLARVAGLLGLQALLDRKPAQLSGGQQQRVALGRAVISEAPVCLMDEPLSN FT LDAQLRHDMRREIRALQQELGITMVYVTHDQTEAMSMADQVVLMRGGRIEQLDTPDGLY FT ARPATEFAARFIGTPPMNLIALDTHDSRPVVAGTQGPALANAPAGAATLGLRPEHIRID FT ADGMPAVIESVEYFGADSVAVCRLGSCGGVAVRVNGHLRSAPGTTVCLAWPDERQHFFA FT ADAAVL" FT misc_feature 162647..163192 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1e-65" FT misc_feature 162668..162691 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 162962..163006 FT /note="PS00211 ABC transporters family signature." FT CDS 163646..164938 FT /transl_table=11 FT /locus_tag="BPP4347" FT /product="probable extracellular solute-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0121" FT /db_xref="GOA:Q7W2Q7" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q7W2Q7" FT /protein_id="CAE39626.1" FT /translation="MRRIVLKTLAAGLAGAFLALPAQAQQPVEVEFYYPVAVGGPITKI FT VDDMVADFHKENPDIRIKPIYAGTYQDSIAKALTALKGGTPPQLAVLLSTDMFTLIDED FT AIVPVDGLAKSDADKKWLGGFYDAVMQNSRTGGHVWGVPFQRSTIVMYYNKDLFKEAGL FT DPERAPATWDELVEYGKKLTKKDANGNVSQWGVKIPSGGAFAYWLFQALTTPNDAILMN FT EEGSQVYLDKPAVVEAAQFWQDLSVKHGVMPKGTIDWGTTPKDFLEKKAAIVWTTTGNL FT TNIRKNADFPFGVAMMPKKKRGGSPTGGGNFYIFKSGTPAQQQAALKFAQWATTPERAT FT DWSIATGYVAVTPAAWQTERMKKYAQEVPAATVARDQLEVSVAEFSTHENQRVTKVLND FT ALQAALTGSKTPQQALTDAQREADRVLRSYK" FT misc_feature 163646..163717 FT /note="Signal peptide predicted for BPP4347 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 1.000 between residues 24 and 25" FT misc_feature 163757..164893 FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding protein, score 4.6e-61" FT CDS 164949..165824 FT /transl_table=11 FT /locus_tag="BPP4348" FT /product="inner membrane component of FT binding-protein-dependent transport system" FT /note="ortholog of Bordetella pertussis (BX470248) BP0120" FT /db_xref="GOA:Q7W2Q6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2Q6" FT /protein_id="CAE39627.1" FT /translation="MSRTTQAVYGWLLLLPAVVLLAAFTHYPALATLWHSFFSTPKGSR FT PARFVGLENYALLRDDPVFWQSLWNNLWFALGTIPTSIAIALAMALWVNGKLHGRGFLR FT MAYFTPTVLPMVAVANIWLFFYTPQYGLIAQVMQWFGLAGPNWLGSRDTALPALMMVTV FT WKESGFFMIFYLAALQTVSPSLREAAMLEGASRWQYFRRVLWPLLMPTTLFVLVNALIN FT AFRLVDHVVVMTRGGPDNASTLLLFYIYQVGFSFWDTAYAATLTVVLLAVLAATALIKF FT RWLDRRTHYQ" FT misc_feature 164949..165014 FT /note="Signal peptide predicted for BPP4348 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.912) with cleavage site FT probability 0.365 between residues 22 and 23" FT misc_feature join(164967..165035,165162..165230,165249..165317, FT 165414..165482,165543..165611,165723..165791) FT /note="6 probable transmembrane helices predicted for FT BPP4348 by TMHMM2.0 at aa 7-29, 72-94, 101-123, 156-178, FT 199-221 and 259-281" FT misc_feature 165477..165701 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.1e-13" FT CDS 165821..166621 FT /transl_table=11 FT /locus_tag="BPP4349" FT /product="inner membrane component of FT binding-protein-dependent transport system" FT /note="ortholog of Bordetella pertussis (BX470248) BP0119" FT /db_xref="GOA:Q7W2Q5" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2Q5" FT /protein_id="CAE39628.1" FT /translation="MNRTLDTLGAWLLGLLWILPLAYAAWAAFHPPAYATRFDLLAPLT FT LENFARAWNAAPFPRYFLNTFLLVTMVLAAQLVLSTLAGYAFARFEFRGRDFVFMLVLL FT QLMVMPDVLLVENYRSMSLLGVRDTVFAVGLPYFASAFGIFLLRQTFKTVPRELEEAAR FT VEGASPWQVLMKVYVPLARPIYVAYGLVSVSHHWNNFLWPLIITNSVESRPLTVGLQVF FT SSTDQGIDWSVITAATLLSAAPLLVGFLLFQRQFVQSFMRAGIR" FT misc_feature 165821..165892 FT /note="Signal peptide predicted for BPP4349 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.983) with cleavage site FT probability 0.879 between residues 24 and 25" FT misc_feature join(165839..165907,166016..166084,166109..166165, FT 166208..166261,166370..166438,166511..166579) FT /note="6 probable transmembrane helices predicted for FT BPP4349 by TMHMM2.0 at aa 7-29, 66-88, 97-115, 130-147, FT 184-206 and 231-253" FT misc_feature 166268..166498 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.2e-13" FT misc_feature 166271..166357 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS complement(166862..167179) FT /transl_table=11 FT /locus_tag="BPP4350" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0117" FT /db_xref="UniProtKB/TrEMBL:Q7W2Q4" FT /protein_id="CAE39629.1" FT /translation="MRSEVTVVFDARRTVDLSVDVEPSVQAAAAARDWFDSAWEMLGCE FT PLRPSGKVLLLDKILGVADALGYDTLSGDAKESREFAEQAALALGKARIVVDLPGLIVG FT H" FT CDS complement(167270..167617) FT /transl_table=11 FT /locus_tag="BPP4351" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0116" FT /db_xref="InterPro:IPR014991" FT /db_xref="UniProtKB/TrEMBL:Q7W2Q3" FT /protein_id="CAE39630.1" FT /translation="MLITFHSKVAAEVLMRTDDAAPLLRAAGKSFRDAIPERGVFTADQ FT LQSAITGLERAIAAADRSPPDDDEPHPDKEPVHPIELAVGLHQRAFPLLDMMRKTAAAG FT ADLTWEVSRGW" FT CDS 167905..169590 FT /transl_table=11 FT /gene="argS" FT /locus_tag="BPP4352" FT /product="arginyl-tRNA synthetase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0115" FT /db_xref="GOA:Q7W2Q2" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Q2" FT /protein_id="CAE39631.1" FT /translation="MLLEQQKQLISLIQAAVAQCLPEAQAQVQLERPKVAAHGDIATNV FT AMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQA FT VASQADAYGRAPRNGEKVLVEFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTRE FT FYYNDAGNQIDNLAISVQARGRGIAPDAPDYPTDGYKGDYIVEIARDFAARKSVQASDG FT QPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYFLESSLYASGRVQETVDT FT LVAKGHTYEEGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHA FT VNIQGSDHHGTVARVRAGLQGLEAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVT FT MRDLIDWVGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNS FT GASAAEIAQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHA FT WYNAERVLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM" FT misc_feature 167923..168183 FT /note="HMMPfam hit to PF03485, Arginyl tRNA synthetase N FT terminal domain, score 8.4e-22" FT misc_feature 168187..169191 FT /note="HMMPfam hit to PF00750, tRNA synthetases class I FT (R), score 1.9e-65" FT misc_feature 168295..168324 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT CDS 169651..170283 FT /transl_table=11 FT /locus_tag="BPP4353" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0114" FT /db_xref="InterPro:IPR007730" FT /db_xref="UniProtKB/TrEMBL:Q7W2Q1" FT /protein_id="CAE39632.1" FT /translation="MYGVLAGLLIGLIVAAAVAFYVTKAPMPFVDRATRQPDQGKLPDP FT RNAPDPNQGLYGRDGAAGTPPTGPTATAPSPLPGVTPGAPSRQPDDLGALIATLPNLDR FT APAPAATPAPAAKSAKPAAPAASATPAAPASGTYFLQAGAYRVLEDAEALRARIILLGL FT PVVMQRAEVNGVQVNRVRVGPFGRLDDMNRARSRLGENDIKSAVVRQ" FT misc_feature 169651..169722 FT /note="Signal peptide predicted for BPP4353 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.976) with cleavage site FT probability 0.639 between residues 24 and 25" FT misc_feature 169660..169719 FT /note="1 probable transmembrane helix predicted for BPP4353 FT by TMHMM2.0 at aa 4-23" FT CDS 170345..170974 FT /transl_table=11 FT /gene="dsbA" FT /locus_tag="BPP4354" FT /product="thiol:disulfide interchange protein DsbA FT precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP0113" FT /db_xref="GOA:Q7W2Q0" FT /db_xref="InterPro:IPR012335" FT /db_xref="PDB:3HD5" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2Q0" FT /protein_id="CAE39633.1" FT /translation="MQSTTFTRLLAAAALAATTLFAPATQAQGAQQYVNINPPMPSDTP FT GKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIAFNAGMKPLQQLYYTLQA FT LERPDLHPKVFTAIHTERKRLFDKKAMGEWAASQGVDRAKFDSVFDSFSVQTQVQRASQ FT LAEAAHIDGTPAFAVGGRYMTSPVLAGNDYAGALKVVDQLIVQSRK" FT misc_feature 170345..170425 FT /note="Signal peptide predicted for BPP4354 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.862 between residues 27 and 28" FT misc_feature 170360..170965 FT /note="HMMPfam hit to PF01323, DSBA oxidoreductase, score FT 2.4e-10" FT misc_feature 170492..170548 FT /note="PS00194 Thioredoxin family active site." FT CDS complement(171056..172249) FT /transl_table=11 FT /gene="metC" FT /locus_tag="BPP4355" FT /product="cystathionine beta-lyase" FT /EC_number="4.4.1.8" FT /note="ortholog of Bordetella pertussis (BX470248) BP0112" FT /db_xref="GOA:Q7W2P9" FT /db_xref="HSSP:1GC0" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/TrEMBL:Q7W2P9" FT /protein_id="CAE39634.1" FT /translation="MTDESRHIDTLLQHLGTAPFDPDTGAAPVNLPSMRASTVRFRDLA FT ALEQAQRRKAGGDRAVTYGRMGMDTHAALEHVFKELEAGTHCYLASSGMGAVTMAFLSL FT LSAGEHALVADCVYGPVYELDNAVLKRMGIELTFFAPGDDLQALVRPNTRLLYVESPGS FT LLFQMLDLLALAEFARRNQLVLATDNTWGSGYIYRPLELGAQVSVIAGTKYVGGHSDLM FT LGAVVTNDEAVAQRLNRTQYAMGYSVSADDAWLALRGVRTLPIRMAQHARHAQRVCEFL FT QGRPEVARIYHPAWPQDPGHALWLRDCSGSNGMLAVELRLSQPAARVFVESLQLFGIGF FT SWGGFESLVQLVTPGELARHYYWQGGGNALVRLHIGLESPEDVIADLTQALARAASA" FT misc_feature complement(171074..172225) FT /note="HMMPfam hit to PF01053, Cys/Met metabolism FT PLP-dependent enzyme, score 5.6e-104" FT misc_feature complement(171593..171637) FT /note="PS00868 Cys/Met metabolism enzymes FT pyridoxal-phosphate attachment site." FT CDS 172423..173049 FT /transl_table=11 FT /locus_tag="BPP4356" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0111" FT /db_xref="GOA:Q7W2P8" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/TrEMBL:Q7W2P8" FT /protein_id="CAE39635.1" FT /translation="MLPFDTLTAFFGIAVLLALTPGPDNLFVLMQSAIWGRAAGLFVVL FT GLCTGLLGHTAAVAVGLAAVFAASPAAFTALKLAGAAYLAYLAWQVLRAPAGGGGGQRP FT EPLARGALYRRGIIMNLANPKVLLFFFAFLPQFTRPEAGPMGWQIVELGAVFMLATLLV FT FGAIAVFSGGFGRLLQRSARAQRWLNRLAGLVFIGLALRLATASR" FT misc_feature join(172441..172509,172543..172611,172621..172689, FT 172768..172836,172879..172947,172981..173040) FT /note="6 probable transmembrane helices predicted for FT BPP4356 by TMHMM2.0 at aa 47-69, 81-103, 107-129, 156-178, FT 193-215 and 227-246" FT misc_feature 172630..172959 FT /note="HMMPfam hit to PF01810, LysE type translocator, FT score 1.3e-14" FT CDS complement(173073..174131) FT /transl_table=11 FT /locus_tag="BPP4357" FT /product="metallo-beta-lactamase family protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0442" FT /db_xref="GOA:Q7W2P7" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q7W2P7" FT /protein_id="CAE39636.1" FT /translation="MNPNEQKLQYPWDQTQPEPGVALVVAEGVKWIRMPLPFALDHINL FT WLLRDEIDGRQGWTIVDCGIARDEVKTIWEQVFENELEGLPVLRVLVTHMHPDHIGLAH FT WLCERWNAPLWISMTDFMVASLWSRRTDGGASGGQAAVEHFARHGLTDTDAQEQIRQRA FT GYYPNLVPAVPSRYTRLLHGDEVAIGGHPWRVIVGYGHAPEHVSLFSPAHKVLISGDMV FT LPRISTNVSVFDHEPDANPLPLYLRSLDRYDDLPADTVVLPSHGRPFVGLHERIAQQHA FT HHDERLAEVLQACATPQSTADIVPVLFKRKLDLHQLTFAMGEALAHLHALYFEGKLKRR FT TDADGIVRFQAA" FT misc_feature complement(173337..174020) FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily, score 2.2e-14" FT CDS 174206..174580 FT /transl_table=11 FT /locus_tag="BPP4358" FT /product="MerR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0441" FT /db_xref="GOA:Q7W2P6" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:Q7W2P6" FT /protein_id="CAE39637.1" FT /translation="MSTWTISELAREFDITPRTIRFYEDQGIVSPLRDGRNRVYSTRDR FT ARLKLALRGKRLGLLLSEIRSLIDMYDGPGDTAPQLRHYLTILAQHRATLEQQQRDIED FT TLAEISQQELQCQRLLAQKQ" FT misc_feature 174224..174325 FT /note="HMMPfam hit to PF00376, Bacterial regulatory FT proteins, merR family, score 0.00041" FT CDS 174788..175966 FT /transl_table=11 FT /gene="ivd" FT /locus_tag="BPP4359" FT /product="isovaleryl-CoA dehydrogenase" FT /EC_number="1.3.99.10" FT /note="ortholog of Bordetella pertussis (BX470248) BP0440 + FT BP0444" FT /note="Similar to Homo sapiens isovaleryl-coa FT dehydrogenase, mitochondrial precursor ivD SWALL:IVD_HUMAN FT (SWALL:P26440) (423 aa) fasta scores: E(): 8.3e-93, 61.81% FT id in 385 aa" FT /db_xref="GOA:Q7W2P5" FT /db_xref="HSSP:1IVH" FT /db_xref="InterPro:IPR006092" FT /db_xref="UniProtKB/TrEMBL:Q7W2P5" FT /protein_id="CAE39638.1" FT /translation="MDIPGLNFNLGEDLDMLRDAVRTFANAEIAPRAAEIDRSDQFPMD FT LWRKFGDLGVLGMTVSDEYGGTGLGYLAHMVVMEEISRASASVALSYGAHSNLCVNQIF FT RNGSEAQKARYLPKLVSGEHVDALAMSEPGTGSDVVSMRLRADRKGDRYVLNGTKMWIT FT NGPDADTLVVYAKTDPEAHQRGITAFLVEKGFKGFSVAQKLDKLGMRGSHTGELVFEDC FT EVPEENVLGQVNGGVRVLMSGLDYERAVLSGGPLGIMQGVMDVVVPYIHDRKQFGQAIG FT EFQLIQGKIADMYSVLQASRAFCYAVGRNLDQLGAGHVRQVRKDCAALILYTAEKATWM FT AGEGVQILGGNGYINEYPVGRMWRDAKLYEIGAGTSEIRRMLIGRELYAETA" FT misc_feature 174815..175168 FT /note="HMMPfam hit to PF02771, Acyl-CoA dehydrogenase, FT N-terminal domain, score 4.9e-46" FT misc_feature 175172..175477 FT /note="HMMPfam hit to PF02770, Acyl-CoA dehydrogenase, FT middle domain, score 3.1e-60" FT misc_feature 175487..175951 FT /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, FT C-terminal domain, score 3.5e-51" FT misc_feature 175823..175882 FT /note="PS00073 Acyl-CoA dehydrogenases signature 2." FT CDS 176005..177807 FT /transl_table=11 FT /gene="aceK" FT /locus_tag="BPP4360" FT /product="isocitrate dehydrogenase kinase/phosphatase" FT /EC_number="2.7.1.116" FT /note="ortholog of Bordetella pertussis (BX470248) BP0445" FT /db_xref="GOA:Q7W2P4" FT /db_xref="InterPro:IPR010452" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2P4" FT /protein_id="CAE39639.1" FT /translation="MIYSGDVQRIEPAPVAGPAPLDVAHLILAGFDRHYALFRYSAQRA FT KSLFESGDWHGMQRLSRERIEYYDMRVRECATQLDSALRGSDARTADGSRANGSAALSE FT AQTAFWQAVKQEFVGLLADHRQPECAETFFNSVSCRILHRDYFHNDFLFVRPAIATDYL FT DSRIPSYRVYYPVAEGLHKSLIRMVADFGLAVPYADLPRDAGPRLASDCQIQVLGSLFF FT RNTGAYIVGRLINQGTVYPFAVALRRNPAGQVCLDALLLGTDDLSTLFSFTRAYFLVDM FT ETPAAVVNFLASLLPRKPKAELYTMLGLQKQGKTLFYRDFLHHLTHSRDAFDIAPGIRG FT MVMCVFTLPSYPYVFKLIKDRIDKDGMDHATVRRKYQMVKLHDRVGRMADTWEYSQVAL FT PRSRFAPRLLEELRRLVPSLIEENGDTVVIRHVYIERRMMPLNLYLRHASDPLLEVAVR FT EYGDAIRQLATANIFPGDMLYKNFGVTRLGRVVFYDYDEIQRMTEMNFRAIPPAPNEEA FT ELSSEPWYAVGPNDVFPEEFGRFLLGDPRVRQAFLRHHADLLAPQWWQACRARVAQGRI FT EEFFPYDTDRRLHPQAAPPPRAAA" FT misc_feature 176926..176949 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 177842..179023 FT /transl_table=11 FT /locus_tag="BPP4361" FT /product="acetyl-CoA acetyltransferase" FT /EC_number="2.3.1.9" FT /note="ortholog of Bordetella pertussis (BX470248) BP0447" FT /db_xref="GOA:Q7W2P3" FT /db_xref="HSSP:1DLU" FT /db_xref="InterPro:IPR002155" FT /db_xref="UniProtKB/TrEMBL:Q7W2P3" FT /protein_id="CAE39640.1" FT /translation="MSDPIVIVSVARTPMGGMLGSLSGLAAHELGSAAIKAAIERAGIK FT PEQVDEVIMGNVLQAGQGQAPARQAALGAGLPLGVGCTTIHKVCGSGLKAAMFGHDLLT FT AGSVDVVVAGGQESMSNAPYLLLKGRQGYRYGHNTVYDHMALDGLEDAYDRGKAMGVFA FT EDCATKYSFTREQQDAFSLESLRRARAASEDGSFKWEITPVTVAGRKGDTVIDTDEAPT FT KAMPEKIPTLKPAFKKDGTVTAANSSSISDGAAAMVLMRASTAEKLGVKPLARIVAHAQ FT HAQEPNWFTTAPVGALKNLFKKTGWQASDVDLYEINEAFAVVTMAAMKDFDLPHDKVNV FT HGGATALGHPIGASGARLMATLVGALRKTGGKRGVATLCIGGGEAVAMAIEML" FT misc_feature 177845..178630 FT /note="HMMPfam hit to PF00108, Thiolase, N-terminal domain, FT score 5.4e-120" FT misc_feature 178643..179017 FT /note="HMMPfam hit to PF02803, Thiolase, C-terminal domain, FT score 2.8e-54" FT misc_feature 178961..179002 FT /note="PS00099 Thiolases active site." FT CDS 179124..180731 FT /transl_table=11 FT /gene="accB" FT /locus_tag="BPP4362" FT /product="carboxyltransferase subunit of acetyl-CoA FT carboxylase" FT /EC_number="6.4.1.4" FT /note="ortholog of Bordetella pertussis (BX470248) BP0448" FT /db_xref="GOA:Q7W2P2" FT /db_xref="InterPro:IPR011762" FT /db_xref="UniProtKB/TrEMBL:Q7W2P2" FT /protein_id="CAE39641.1" FT /translation="MPIIESRIDTRSQDYADNARAMQAQLDDLNQKLARTAQGGSETAR FT AKHVGRGKLLPRERVEQLVDPGSPFLELSPMAAHGMYGDEAPGAGMITGVGRIAGTECV FT IVCNDATVKGGTYYPMTVKKHLRAQEIAAQNRLPCVYLVDSGGANLPRQDEVFPDRDHF FT GRIFYNQAVMSSQGIAQIAVVMGSCTAGGAYVPAMCDESIIVRDQGTIFLGGPPLVKAA FT TGEEVSAEDLGGGDVHTRLSGVVDHLAANDMHALQLARNAVARLNRAKPAALALAPVRE FT PRYDASELNGIIPADTRKPYDVREVIARIVDGSEFDEFKARYGTTLVTGFAHIHGMPVG FT IVANNGILFSESAQKGAHFIELCAQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVT FT AVATAAVPKFTILIGGSFGAGNYGMCGRAYSPRMLFMWPNARISVMGGEQAASVLATVK FT RDGIEARGAQWSGAEEDAFKQPIREQYEREGHPYYATARLWDDGIIAPADTRRVLGLAL FT SAALNAPIEDTRFGVFRM" FT misc_feature 179220..180722 FT /note="HMMPfam hit to PF01039, Carboxyl transferase domain, FT score 3.8e-219" FT CDS 180778..182799 FT /transl_table=11 FT /gene="accA" FT /gene_synonym="accC" FT /gene_synonym="FabG" FT /locus_tag="BPP4363" FT /product="biotin carboxylase subunit of acetyl-CoA FT carboxylase" FT /EC_number="6.4.1.4" FT /note="ortholog of Bordetella pertussis (BX470248) BP0449" FT /db_xref="GOA:Q7W2P1" FT /db_xref="HSSP:1BNC" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/TrEMBL:Q7W2P1" FT /protein_id="CAE39642.1" FT /translation="MFSTLLIANRGEIACRVAATARRMGLRTVAVYSDADANARHVAAC FT DVAVHIGGAEPRASYLRADAILQAARDTGAQAIHPGYGFLSENEGFAEAVAQAGMVFVG FT PPAGAIAAMGSKSAAKALMERAGVPLVPGYHGEDQDPQFLRQQADAIGYPVLIKASAGG FT GGKGMRVVEESAAFADALASCQREASASFGDDRVLIERYLQKPRHIEIQVFADSHGNCV FT YLFERDCSVQRRHQKVIEEAPAPGMTPERRRAMGEAAVAAARAVGYVGAGTVEFIAEPD FT GRFYFMEMNTRLQVEHPVTEMITGHDLVEWQLRVAAGQPLPAAQDELRLDGHAIEARIY FT AENPEKGFLPSIGTLAYLGLPAHTAFANGEVRVDGGVRMGDTITPYYDPMIAKLIVHGA FT DREQARARMIQALAHTQAVGVQTNAAFLGRLMRDEAFATADLDTGLIERRRATLLPEPQ FT PAGADVLALASAAVLVRQGLAQPQGEVGKAADPWDARDGWRLGGRYRQTLCWVDNGERR FT DIEITREGGQWRIGAAPAAGQAFSWRAQPSANPQLSYGLRITLDGRESAGTVVLHAGKA FT YVFHDGATHILDLYDALAHAQDDAEGHGGGLTAPMPGKIISIAVAVGDKVEKGQALLVM FT EAMKMEHTITAPAAGEVAGLFYAVGDQVGEGAALIEVK" FT misc_feature 180778..181116 FT /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthase FT L chain, N-terminal domain, score 6.6e-40" FT misc_feature 181120..181764 FT /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase FT L chain, ATP binding domain, score 4.3e-109" FT misc_feature 181234..181278 FT /note="PS00866 Carbamoyl-phosphate synthase subdomain FT signature 1." FT misc_feature 181633..181656 FT /note="PS00867 Carbamoyl-phosphate synthase subdomain FT signature 2." FT misc_feature 181783..182118 FT /note="HMMPfam hit to PF02785, Biotin carboxylase FT C-terminal domain, score 3.3e-45" FT misc_feature 182590..182793 FT /note="HMMPfam hit to PF00364, Biotin-requiring enzyme, FT score 1.6e-20" FT misc_feature 182662..182715 FT /note="PS00188 Biotin-requiring enzymes attachment site." FT CDS complement(182833..183078) FT /transl_table=11 FT /locus_tag="BPP4364" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0450" FT /db_xref="InterPro:IPR012868" FT /db_xref="UniProtKB/TrEMBL:Q7W2P0" FT /protein_id="CAE39643.1" FT /translation="MAMQDFRPGVYRHYKGDHYLALGLARADETDEVVVVYTRLYARAG FT LPMSTRLLRIWNETVDTGAGPQPRFAYVGHVTPEQG" FT CDS complement(183092..184282) FT /transl_table=11 FT /gene="argM" FT /gene_synonym="astC" FT /gene_synonym="cstC" FT /locus_tag="BPP4365" FT /product="succinylornithine transaminase" FT /EC_number="2.6.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP0451" FT /db_xref="GOA:Q7W2N9" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2N9" FT /protein_id="CAE39644.1" FT /translation="MEFSQFKVNALMEITACPDLVFVRGQGSWLEDHAGKRYLDFVQGW FT AVNTLGHCAPEMKRALAEQADKLMNPSPAFYNLPSIELAQRLTSASCFDRVFFANSGAE FT ANEGAIKLARKWGRVNRNGAYKIITMNHGFHGRTLATMSASGKPGWDTMFAPQVEGFPK FT AEINDLDSVRALIDAQTVAVMLEPVQGEAGVIPATREFMQGLRKLADEHGILFIVDEVQ FT TGMGRTGSLFAYQQFDVIPDIMTLAKGIGGGIPLAALLAREEVCVFAHGDQGGTYNGNP FT LCAAVGVAVFDTITAPGFMEAAQARTRQLSEGLLALSAKRGLRGERGMGLLRALVLDRD FT DAPAIVEAARMLAPEGLLLNAPRGNLLRFMPALNVTEADMARMLEQLDGVIAAVRK" FT misc_feature complement(183098..184261) FT /note="HMMPfam hit to PF00202, Aminotransferase class-III, FT score 3.2e-127" FT misc_feature complement(183524..183637) FT /note="PS00600 Aminotransferases class-III FT pyridoxal-phosphate attachment site." FT CDS 184415..185443 FT /transl_table=11 FT /locus_tag="BPP4366" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0452" FT /db_xref="GOA:Q7W2N8" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W2N8" FT /protein_id="CAE39645.1" FT /translation="MPAGGLRPLRPPRSTVFRAVNMNRVFAGLCAGLALAAASFAAHAD FT YPERPIRMLVPFPPGQATDIFARALAEKLGADLKQPIVVENRAGAGSNIGMGEAARATP FT DGYTLVVAGSAAAVNQTLYKNINYSLTKDFAPVSGVFSVPLVFLATPASGIDSLQKLVT FT QARAHPGELAYASAGIGGTQHLSAEMFKAAADIDIRHIPYKGSGPAQADFLGHQVPLMV FT DSVTAGLPHIKTGKAVPLAVTTASRLAQLPDVPTVAESGYPGFEAIGWAAVLAPAGTPP FT AVTELLSRHIGQALGSAELARFLRERGAEPMPTTPQATSQFIAAEVQKWGDAVRRSGAQ FT VD" FT misc_feature 184415..184546 FT /note="Signal peptide predicted for BPP4366 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.987 between residues 44 and 45" FT misc_feature 184487..184546 FT /note="1 probable transmembrane helix predicted for BPP4366 FT by TMHMM2.0 at aa 25-44" FT misc_feature 184610..185431 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 9.2e-102" FT CDS complement(join(185466..185969,185971..186591)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP4367" FT /product="low-specificity D-threonine aldolase FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP0453" FT /db_xref="PSEUDO:CAE39646.1" FT CDS 186815..187777 FT /transl_table=11 FT /locus_tag="BPP4368" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0454" FT /db_xref="InterPro:IPR011852" FT /db_xref="UniProtKB/TrEMBL:Q7W2N7" FT /protein_id="CAE39647.1" FT /translation="MSMKSWIKTLTLALAVAGAATSANAQQFFRIGTGGTAGTYYPVGG FT MIANSISQPGKLIATAVASNGSVANINGILGGSLEAGFTQSDVAYWAYSGTGTFDGKPK FT AQDLRLIATLYPESIHLVARKGSGIKTVADLRGKRVSMDEPGSGTLVDVRLILGAFGMT FT DKDIKAEYLKPNQAGDKLKDGGLDAFFFVGGAPAGAISELASSGAGIELVPIVGPEIDK FT LRSQQEFFTPDTIAANTYQNVGEVKTISVNAQLVTSAKLPEQTVYDIVKALYSDATRKT FT LDNGHAKGKLITKENAVKGAGIPFHAGAEKYYKEVGLLK" FT misc_feature 186815..186889 FT /note="Signal peptide predicted for BPP4368 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.989 between residues 25 and 26" FT CDS 187892..189925 FT /transl_table=11 FT /locus_tag="BPP4369" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0455" FT /db_xref="InterPro:IPR011853" FT /db_xref="UniProtKB/TrEMBL:Q7W2N6" FT /protein_id="CAE39648.1" FT /translation="MQLMQIDHDKTQQLTEKYDSEIRFRPLDKTATWIVSILLVTLSIF FT HYYTAGFGLLREATHRGVHLAFVLSLIFLVFGFSKAHYQREPKSTLLRPGGVPLYDWAI FT AIVLALSVLYIPYIFEDLAFRVGNPLPMDVAMGTILIVGLLEGTRRAMGWPLPIIAMVF FT LAYAAFGPYFPGLLQHAGNNWPQIVNHMYLTSQGIYGVAVGVVATYVFHFVLFGVLATR FT IGLGQLFLDVASTIAGRYAGGPAKVSVFGSAMFGMLSGSSVANAVTVGSLTIPAMIRIG FT YPRHFAAGVEAASSTGGQITPPIMGAAAFLMIEFLGIPYQQIAIAGIFPAFLYFFGMFM FT QVHFEAKREGLRGLTEEEMPALKASFKKRWPTLLPLIMLIGVLASGRTPYLAAFAGITG FT CIVVGLLNPMQRLRLRDLYEAFETGAKYALAVGAAAGTVGLVIGVVTLTGVGFKISYIV FT ISAAQAIAGGVGTIIPDVVANTQTLTLIAALVMTGIVCILMGCGIPTTANYIIMVAVAA FT PTLVQLGVQPIAAHFFVFYFGILADITPPVALAAYAAAGMAGSDPFKTGNTAFRLGITK FT LIVPFVFVFSPSLLISVQGFTWYDFFTTLVGCMVGLVLLSAAFSRYMLVEMKSWERWVC FT TLGALLTILPGLTSGLVGLAICIPVFLRQLAQLKLENGAKAA" FT misc_feature join(187988..188056,188075..188128,188186..188248, FT 188267..188326,188354..188422,188483..188551, FT 188843..188911,188996..189049,189059..189112, FT 189173..189241,189251..189319,189338..189397, FT 189407..189466,189485..189553,189596..189664, FT 189683..189751,189809..189877) FT /note="17 probable transmembrane helices predicted for FT BPP4369 by TMHMM2.0 at aa 33-55, 62-79, 99-119, 126-145, FT 155-177, 198-220, 318-340, 369-386, 390-407, 428-450, FT 454-476, 483-502, 506-525, 532-554, 569-591, 598-620 and FT 640-662" FT CDS join(190122..192293,192295..192366) FT /pseudo FT /transl_table=11 FT /gene="hemC" FT /locus_tag="BPP4370" FT /product="putative heme receptor (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP0456" FT /db_xref="PSEUDO:CAE39649.1" FT misc_feature 190122..190208 FT /note="Signal peptide predicted for BPP4370 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.901 between residues 29 and 30" FT misc_feature 190158..190190 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature join(192027..192293,192295..192361) FT /note="This hit extended beyond the end of the feature by 0 FT aa and was clipped." FT /note="HMMPfam hit to PF00593, TonB dependent receptor FT C-terminal region, score 3.4e-16" FT misc_feature 192222..192287 FT /note="PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate FT attachment site." FT misc_feature 192310..192361 FT /note="This hit extended beyond the end of the feature by 0 FT aa and was clipped." FT /note="PS01156 TonB-dependent receptor proteins signature FT 2." FT CDS 192645..193103 FT /transl_table=11 FT /locus_tag="BPP4371" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0457" FT /db_xref="InterPro:IPR007456" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2N5" FT /protein_id="CAE39650.1" FT /translation="MFDILVYLFENYYTPQACPAADVLAKRLAAAGFEHEDIDDALGWL FT YGLAETTERCVELAHAPATGIRIYTDAEYQQLGTESIGFITFLESAGVLPAPLREIVID FT RALASPETPISLSKIKIIALMVLWSQEAEIDNLVLEELLDDEGSRRLH" FT CDS 193120..194079 FT /transl_table=11 FT /locus_tag="BPP4372" FT /product="probable aminoacyl-tRNA synthetase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0458" FT /db_xref="GOA:Q7W2N4" FT /db_xref="HSSP:1J09" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2N4" FT /protein_id="CAE39651.1" FT /translation="MARRPVLARHRIDFRNRVNYIGRFAPSPSGPLHAGSLVAALASWL FT DARAHHGLWRLRIEDVDTPRTVPGAAGVIMDQLRALHLHWDGEIMWQSRRGAAYQQAFD FT ALAARGLIYGCGCTRREIADSALRGTADVDGERPYPGTCREGLPASRQARAWRVRVPPG FT VETFVDRWLGPQQQDVAAAVGDFALRRADGLWAYQLAVVVDDADQGVTDVVRGADLLGS FT TARQRVLGRLLGLAPPRVMHVPLIVDPATGLKLSKQNGAPALDCSQPLRMLQQAWSGLG FT FAPLAAATPEAFLQAAAAQWAQRFGMRHAAVPASPKAD" FT misc_feature 193186..194064 FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q), score 3.1e-06" FT CDS complement(194066..196750) FT /transl_table=11 FT /locus_tag="BPP4373" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0459" FT /db_xref="InterPro:IPR018677" FT /db_xref="UniProtKB/TrEMBL:Q7W2N3" FT /protein_id="CAE39652.1" FT /translation="MYPVAAVPPQLARMIRAENRGMQVDTHQQAGSELYAWRQFLGRAT FT LWLGVVLLGSAVVCWVAANWPAMTKIQRFAGAQGLLALSAVIAAWVAWRLREAAGVRRH FT GVGALLVLAGLFLGALLALLGQTYQTGADTWELFAWWALLLLPWALAGASQALWLLWAL FT ILNVAVALWLGERLLSWWWSLSGAGFPALVLAALNLAMLACWEWVAHHRHVSTRVGPRV FT LALLAQGVLVAALLFDFGALADLASATGIAWIATTLGMGFYYQQVRRDLVILALLAAAM FT ICVSLRVVGAWLLELEPGVWAALPLAGLLMAEAVWAVRWLRRLGEQSTRAAVDAEPAGA FT SAGNALDPTEAGAPVLELAPEDARGAAETPWYVHGLLGLSAWLATWLLLLFVAASGIVA FT SKEGALVAGLGLCIVAVAVLRTDSGPFWRQCATAMGFAGQILVMVGLWDSASFASACFF FT ILALGAVVYALTPDLLLRFLSGWMIALAGAGLIWCGLTPGMGDKQLLGLLLEFDALRAA FT FVWLPVAVVGAWGAAVAFSLGHRWSRIRPQQLDPLGWALALAVQSMVWLAGGVTAMQLR FT ALWALHPSTAVLTVAGALLPVAVALSVLWPRRRQLTAGMLWGVPLALLVLALFWLPSPG FT VAFALAWLLLGFGLHKPRLTMLGVISLLAYLMIYYYQLQIPLLDKALWLAGGALLLFLC FT RLLVWLVPQWMRTAAPATRAPMGPPSRALRWRVALVLAGLAVTLAVVNGNIWQREALLA FT KGRVAILELAPVDPRSLMQGDYMALRFAAGEDIERWRNDRPADGQDAAAFAHIDGYVVL FT APDERGVARPVRIQEQAAPRDGNEIVLRYRLRASGVRLVTNAYFFPEGEQQRYQRARYG FT EMRVDDGGTGLLVRMLGEDLNPL" FT misc_feature complement(join(194513..194578,194639..194704, FT 194732..194788,194834..194899,194936..195001, FT 195032..195097,195137..195202,195263..195319, FT 195341..195397,195410..195475,195491..195541, FT 195572..195637,195791..195856,195872..195937, FT 195959..196015,196028..196084,196148..196213, FT 196274..196339,196376..196441,196472..196528, FT 196550..196615)) FT /note="21 probable transmembrane helices predicted for FT BPP4373 by TMHMM2.0 at aa 45-67, 74-93, 103-125, 137-159, FT 179-201, 222-241, 245-264, 271-293, 298-320, 371-393, FT 403-420, 425-447, 451-470, 477-496, 516-538, 551-573, FT 583-605, 617-639, 654-673, 682-704 and 724-746" FT CDS 196751..199378 FT /transl_table=11 FT /gene="topB" FT /locus_tag="BPP4374" FT /product="DNA topoisomerase iii" FT /EC_number="5.99.1.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP0460" FT /db_xref="GOA:Q7W2N2" FT /db_xref="HSSP:1ECL" FT /db_xref="InterPro:IPR006154" FT /db_xref="UniProtKB/TrEMBL:Q7W2N2" FT /protein_id="CAE39653.1" FT /translation="MNKTLIIAEKPSVALDISRALGGFAREGDYFESDRYVLASSIGHL FT LSLVAPNDPVKGKWSFTHLPVIPPAFELGPTDKKSAERLKLLVRLAKRKDVDAIINACD FT AGREGELIFRYIVQFAGVKKPIQRLWLQSMTQQAIRDAFANLRDDEQLKPLEAAARSRA FT EADWLVGINGTRAMTAFNSKDGGFFKTPVGRVQTPTLAIVNERENRIRSFVSRDYWEVH FT ATFVAAAGLYEGRWIDPAFKKDERDPEKRESRLWSLAAAQSVVAACRAQSGSVTEESKP FT STQMSPALYDLTSLQREANGRFGFSAKTTLALAQTLYERHKALTYPRTDSRYLPEDYIN FT TVRQTMQVLAQGDSNAVGALSRHADTVLAQNWVKPNRRIFDNKKVSDHFAIIPTLQVPR FT DLSEAEGKLYDLVLKRFLAVFFPAAEYRVTTRLTEVQGHRFKTEGKVLVTPGWLAVYGK FT EAQGEDANLVPVADGETVRAEDVEAVGLATKPPARYNEATLLSAMEGAGKLVDDEELRE FT AMSERGLGTPATRAAIIEGLLNEAYLRRDGRDLVPTAKARQLMTLLSGLDVSELTSPEL FT TGEWEHKLKQIEQGALDRAAFMREIAQMTQVIVKRAKEYERDTVPGDYATLQTPCPKCG FT GVVKENYRRFACTQCDFSIGKHPGGRTFELPEVEELLAKREIGPLQGFISKMGRPFAAI FT LRISGEYKLEFDFGQNDEEDNEAVDFSGHTSVGACPKCSARVFEHGMSYVCEKSVGPQK FT SCDFRSGKVILQQEISREQMEKLLTAGRTDLLDGFVSSRTNRKFKAFLVRQPDGKVGFE FT FEPRGDKPGRPGAAAKKAAGKTATKTAAKAPAKTAAKKAVKKAAPKKAATKTAARKTAK FT KSAA" FT misc_feature 196757..197146 FT /note="HMMPfam hit to PF01751, Toprim domain, score FT 4.5e-14" FT misc_feature 197192..198448 FT /note="HMMPfam hit to PF01131, DNA topoisomerase, score FT 1.1e-103" FT misc_feature 197693..197740 FT /note="PS00396 Prokaryotic DNA topoisomerase I active FT site." FT misc_feature 199229..199252 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 199530..200594 FT /transl_table=11 FT /locus_tag="BPP4375" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0461" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q7W2N1" FT /protein_id="CAE39654.1" FT /translation="MTALRSPRGATRRRFLAGSGALMAVGLAGSRLSWAQPALGRVAYG FT QGSIDPFFAAGYVALKQGYFAADGLEVEYLNSQSGPRTNQLLAAGQIVFGATAATAAPA FT LTLAGKPAALVFGFDRKLTYANIIVRRADYESGKIRTLADLAGKRVGATQPQSSTWLMA FT LYLMQKAGVADKVDIRPLGDLATMLGALKTGSVSASMATLSMMEQAVQEGWGMPIFDAT FT TEASWQEFMGGDVPGIAALTLQDTIQKRPEVVQAFVGALVKAQDFISANSAAAVTDLIY FT DDYLNAYARPAIEKTIGLYQQTVFLRDNIITEDAYARMTAIMGDGRQFSNEELKKVPYS FT ACVDMRFVRKARGL" FT CDS 200591..201364 FT /transl_table=11 FT /locus_tag="BPP4376" FT /product="ABC-transporter, ATP-binding component" FT /note="ortholog of Bordetella pertussis (BX470248) BP0462" FT /db_xref="GOA:Q7W2N0" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2N0" FT /protein_id="CAE39655.1" FT /translation="MMIELEHVGKVYQARNATVHAVGEVSLRIDDGEFVAIVGPSGCGK FT STLLNMIAGFLPPTTGTVRVAGAPVAGQVPPALGYIFQKDTLLPWFNVRKNVALGLRFQ FT GVDSARIARRVDELLELGHLSGFANAYPHQLSGGMRRRVALLMSLAVEPRILLLDEPFG FT ALDTHTKTHLHRELGEIWRKLGQTIVMVTHDLDEAITLADRVVVLSGPPSRVLLDERIA FT IAHPRDVFTLRDTPQFTAHMRSLWAVLGQQFRNAA" FT misc_feature 200684..201223 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 6.7e-59" FT misc_feature 200705..200728 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 200993..201037 FT /note="PS00211 ABC transporters family signature." FT CDS 201373..202230 FT /transl_table=11 FT /locus_tag="BPP4377" FT /product="ABC transporter, permease component" FT /note="ortholog of Bordetella pertussis (BX470248) BP0463" FT /db_xref="GOA:Q7W2M9" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2M9" FT /protein_id="CAE39656.1" FT /translation="MSSDSPLPDALRDGLRQDREHGARRRLRVTAWQLLILALILGAWE FT GLTRVPWFVQNTIFDPFFISQPSRVAQRLWQWMQPGPRSVWPHLWLTLQATLLGLAVGV FT GSGFVVGLALSRSRMLADVFNPFIVAFNSMPRIAFVPLITMFFGLGMASKVVTSWFVVF FT FLVFFNTYKGGRSVERELVDFCRTLGGSPRQILWRVRIPTAAAWTFAALPNAISFALIG FT VVLAEFVGSTTGMGYLMITALATLNATDMFAAVTLLSVVGIVLVYCVTWLERRLLHWAP FT EFRD" FT misc_feature join(201463..201531,201640..201708,201808..201876, FT 202018..202086,202123..202191) FT /note="5 probable transmembrane helices predicted for FT BPP4377 by TMHMM2.0 at aa 31-53, 90-112, 146-168, 216-238 FT and 251-273" FT misc_feature 201889..202122 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.0068" FT CDS 202243..203022 FT /transl_table=11 FT /gene="idnO" FT /locus_tag="BPP4378" FT /product="gluconate 5-dehydrogenase" FT /EC_number="1.1.1.69" FT /note="ortholog of Bordetella pertussis (BX470248) BP0464" FT /db_xref="GOA:Q7W2M8" FT /db_xref="HSSP:1FJH" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W2M8" FT /protein_id="CAE39657.1" FT /translation="MISLPYLQRFALSGQVALVTGSARGLGLRIAQALAGSGAHVLLNG FT RDAHAVEAAVSDLCQQGLRASALPFDVSDEQATEQAFARIDAEHGRLDILVNNVGARNR FT KPLAETSPAEIRAMMDTNLVAGILLARLAAQHMVRQRYGRLIAITSVAGELARANDAVY FT PAAKQGLTGMMRALAVEFGRHGITSNAIAPGAFATETNAAMANDPQAGAAMAARNPTGR FT WGDPEEIAGAAVFLASPAASYVNGHVLVVDGGLSVQF" FT misc_feature 202279..203007 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 3.3e-81" FT misc_feature 202690..202776 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 203057..204529 FT /transl_table=11 FT /locus_tag="BPP4379" FT /product="probable aldehyde dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0465" FT /db_xref="GOA:Q7W2M7" FT /db_xref="HSSP:1BI9" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q7W2M7" FT /protein_id="CAE39658.1" FT /translation="MQDFPNILQRWYSMKQHFIDNASVPGSSGERIPVIDPSTGQEFDS FT IARGNAADIDLAVQAARRAYEGAWGRLSAAERGRLMLALSLKVLEHRDELTALESRDCG FT KPLKQARADVLAIARYFEYYGGAADKLHGETIPYQQGYTVLTLREPHGVTGHVVPWNYP FT LQIFGRSVGAALAAGNACVVKPAEDACLSLLRVAELAAETGFPAGALNIVTGYGHEAGD FT ALTRHPGIDHISFTGSPRVGVLVTQTAAERHVPVTLELGGKSPQIVFADADLDALVPVA FT VNAIVQNAGQTCSAGSRLLVERGAYERVLERLGAAFAALRAGPAQSDLDCGPLIRKTQQ FT ERVRGFLDLARGDGIATVAQGRIVPEAPAEGYYQAPTLLRDVPVDHPLAQEEVFGPVLA FT AIPFDDEADAVRIANATEYGLAASVWTRDGGRQLRIARKVRSGQVFINNYGAGGGIELP FT FGGVKASGHGREKGFEALYGFTVLKTISIKHD" FT misc_feature 203120..204523 FT /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase FT family, score 4e-174" FT misc_feature 203828..203851 FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT misc_feature 203912..203947 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT CDS 204557..205315 FT /transl_table=11 FT /locus_tag="BPP4380" FT /product="alcohol dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0466" FT /db_xref="GOA:Q7W2M6" FT /db_xref="HSSP:1Q7B" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W2M6" FT /protein_id="CAE39659.1" FT /translation="MRLNGKTAIVTGAGSGFGEGIAATFAREGAKVVVADINEAGGQRV FT AAAINAAGGQAVFVRADVSDNAAVANLLAATLKAFGGLDIVVNNAGTTHRNRPMLEVEE FT DEFDRIYAINVKSIYLTARHMVPHFRAHGGGSFINIASTAAIRPRPGLTWYNGSKGAVV FT TTSKSMAAELGPDNIRVNCVNPVIGATGLLADFMGVPDTPENRKRFLATIPLGRFSTPQ FT DIANACLYLASDEAAFITGACLEVDGGRCV" FT misc_feature 204557..204622 FT /note="Signal peptide predicted for BPP4380 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.716) with cleavage site FT probability 0.441 between residues 22 and 23" FT misc_feature 204566..205306 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 7.8e-75" FT misc_feature 205028..205075 FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT CDS complement(205458..207308) FT /transl_table=11 FT /locus_tag="BPP4381" FT /product="acetolactate synthase large subunit" FT /EC_number="2.2.1.6" FT /note="ortholog of Bordetella pertussis (BX470248) BP0467" FT /db_xref="GOA:Q7W2M5" FT /db_xref="HSSP:1JSC" FT /db_xref="InterPro:IPR012000" FT /db_xref="UniProtKB/TrEMBL:Q7W2M5" FT /protein_id="CAE39660.1" FT /translation="MVSMNDRLHTSTLSALQQAEHAAAVNGAKILLHTLIERGVDTVFG FT YPGGAVLPLYDALYAEPRLRHVLVRHEQAAVHAAEGYARTTGRPGVVFVTSGPGMANTT FT SGLLDAMCDSVPVLCISGQVSTAAIGTDAFQECDAIGISRSVTKWNTQIRAVQDVAEVV FT GRAFDLTRQGRPGPVLVDFPKDIQLASPADALQGEADPARRQLAALRARRQGGKAATRV FT PQGAVRRAAALLAQARRPVFYGGGGLVNSGPQACAAFTELVRQSGAPCTLTLMGLGAFP FT ASDPQFVGMLGMHGTLEANLAMHNADLVVCIGARFDDRITGKLSEFCPHARKIHIDIDP FT ASINKVVRVDVALVGDCLPLVQALRDELAASPLPAQRLGPWWQRIDTWRARDCLAYTPA FT ADEILPQHLMHRLGAALDGRDAIVSTDVGQHQMWAAQYLRFDRPNRWLTSGGAGTMGYG FT VPAAIGAQIAHPGKTVVCVSGDASVLMNIQELSTAMQHDVPVKIVLCNNGYMGMVRQWQ FT ELIHGGRYSHSYNASLPDFVALARAFGWGAARVERPQDLDAALAACLEHPGPYFLDVAV FT AEQENCFPMMPAGHGHHRMMLAEGQWYEEPPLPESPGPQA" FT misc_feature complement(205587..206117) FT /note="HMMPfam hit to PF02775, Thiamine pyrophosphate FT enzyme, C-terminal TPP binding domain, score 1.7e-77" FT misc_feature complement(205863..205922) FT /note="PS00187 Thiamine pyrophosphate enzymes signature." FT misc_feature complement(206154..206642) FT /note="HMMPfam hit to PF00205, Thiamine pyrophosphate FT enzyme, central domain, score 6.8e-54" FT misc_feature complement(206727..207242) FT /note="HMMPfam hit to PF02776, Thiamine pyrophosphate FT enzyme, N-terminal TPP binding domain, score 3.1e-81" FT CDS 207402..207878 FT /transl_table=11 FT /locus_tag="BPP4382" FT /product="AsnC-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0468" FT /db_xref="GOA:Q7W2M4" FT /db_xref="HSSP:1I1G" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q7W2M4" FT /protein_id="CAE39661.1" FT /translation="MKLDKFDLAILKALQDNARASLNDIGAAVGLSSTPCWNRIKRMEG FT AGIIRGYTVDIDPASIGFTDTVIVHVTLESHSEETLYEFGRALAQIPEVLEAFLVSGDY FT DYYIRIAVRDTRDYERLLRERLYRIPGIRHSKSCFVLRSLKETRLPLTPPPEQA" FT misc_feature 207462..207542 FT /note="PS00519 Bacterial regulatory proteins, asnC family FT signature." FT misc_feature 207480..207791 FT /note="HMMPfam hit to PF01037, AsnC family, score 1.5e-39" FT CDS complement(207895..208851) FT /transl_table=11 FT /locus_tag="BPP4383" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0469" FT /db_xref="InterPro:IPR007913" FT /db_xref="UniProtKB/TrEMBL:Q7W2M3" FT /protein_id="CAE39662.1" FT /translation="MWLPKFRCSQIVMIVRPRPTAWGLLFILRGSVIPHIAAKVAVIVA FT LSCVVAWLHARQWFAPGHLNAVPFSLFGLALSVFLGFRNNVCYDRWWEARKQWAELSAQ FT CRSLARETAAVLSGAADAPRQARIVRRLIGFNHALVARLRGGDPLTAARPWLPDDESMA FT LAGHRNVPDAILRAVTGDLHEGGPQRRYGEVVYQGLQQRVLACAQVQAACERIKTTPTP FT FAYSLLLHRTAWLFCLLLPFGLVGTLGPLTPLAVAFVAYTFFGLDALGDELEEPFGLAE FT NDLPLAALARDLEIDLLEGLGAHPLPAPLLPRGYVLT" FT misc_feature complement(join(208084..208149,208612..208677, FT 208723..208788)) FT /note="3 probable transmembrane helices predicted for FT BPP4383 by TMHMM2.0 at aa 21-43, 58-80 and 234-256" FT CDS 208913..209422 FT /transl_table=11 FT /locus_tag="BPP4384" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0470" FT /db_xref="InterPro:IPR001214" FT /db_xref="UniProtKB/TrEMBL:Q7W2M2" FT /protein_id="CAE39663.1" FT /translation="MHPMTEIIKPWHSVRRSRLHGNGVFATRKIPAGTRIIEYGGKRIS FT AAEADRRHPTNPDDPFHTFFFSLSSGRVIDGGDEGNDARWINHSCDPNCEAQEDRHGKR FT VYIVALRDIARGEELFYDYGLVLDGRITRKLKEGYRCLCGTTPCRGTMLALPEKKKTKA FT RSAEKA" FT misc_feature 208919..209302 FT /note="HMMPfam hit to PF00856, SET domain, score 3.3e-32" FT CDS 209796..210488 FT /transl_table=11 FT /gene="ribB" FT /gene_synonym="htrP" FT /locus_tag="BPP4385" FT /product="3,4-dihydroxy-2-butanone 4-phosphate synthase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0471" FT /db_xref="GOA:Q7W2M1" FT /db_xref="InterPro:IPR000422" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2M1" FT /protein_id="CAE39664.1" FT /translation="MSNVVPTPVSPLFAQPFATRLERALQHLRIGRPVILMDDFDRENE FT ADLIVAADKLTVPVMAQLIRDGSGIVCLCLPGETLDRLELPPMVDSNRSRYSTAFTVSI FT EAREGVTTGVSAVDRVTTIRAAIAPGARSGDVVSPGHVFPLRAQPGGVLTRRGHTEGSV FT DLAALAGLRPAGVLCELMNADGTMMRGASLERYAAKEGLVALAIDELAAHLQARGATGA FT PAELAVAA" FT misc_feature 209856..210443 FT /note="HMMPfam hit to PF00926, 3,4-dihydroxy-2-butanone FT 4-phosphate synthase, score 4.9e-97" FT misc_feature 210135..210164 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT CDS complement(210502..211017) FT /transl_table=11 FT /locus_tag="BPP4386" FT /product="conserved hypothetical" FT /note="ortholog of Bordetella pertussis (BX470248) BP0472" FT /note="Similar to several proteins of unknown function FT including: Pseudomonas aeruginosa hypothetical protein FT Pa0145 SWALL:Q9I6Y7 (EMBL:AE004452) (172 aa) fasta scores: FT E(): 1.3e-30, 56.54% id in 168 aa, and to Ralstonia FT solanacearum hypothetical protein Rsc0745 SWALL:Q8Y1E5 FT (EMBL:AL646060) (161 aa) fasta scores: E(): 1.4e-30, 56.7% FT id in 164 aa" FT /db_xref="InterPro:IPR007710" FT /db_xref="UniProtKB/TrEMBL:Q7W2M0" FT /protein_id="CAE39665.1" FT /translation="MRRVYLAGFDVFRADALAHGERLKALCREYGFEGCYPLDNQAPGS FT LAGRALAEWILRQNLALIDRADLVMANLNPFRGHEPDSGTAFEVGYAVALGKPVWAYTA FT QAASLVEQLGARRAPHDPSRHVDAQGYTVEDFGLNLNLMLACTARVVAGDAVQCLAAMA FT AQARASTS" FT CDS complement(211075..211599) FT /transl_table=11 FT /locus_tag="BPP4387" FT /product="possible membrane protein" FT /note="Similar to several proteins of unknown function e.g. FT Agrobacterium tumefaciens hypothetical protein Atu1998 FT SWALL:AAL42991 (EMBL:AE009151) (158 aa) fasta scores: E(): FT 3.1e-18, 41.83% id in 153 aa" FT /db_xref="InterPro:IPR009959" FT /db_xref="UniProtKB/TrEMBL:Q7W2L9" FT /protein_id="CAE39666.1" FT /translation="MADHARPGPFSVNWMFVYPRPMMRKTLHTLALSMATVACLMSAAP FT AYSQSTQENKDLVLAFFRMMFQDRNVEEAARRYLSPAYVQHNPYMADGVSPLVDFFLPY FT FEQNPEASVEIKRVIAEGELVVVHNLWKESPGDRGQAVVDIFRVQNGKIVEHWDVSQEI FT PENPANKNGMF" FT misc_feature complement(211456..211599) FT /note="Signal peptide predicted for BPP4387 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.994) with cleavage site FT probability 0.948 between residues 48 and 49" FT CDS complement(211616..212227) FT /transl_table=11 FT /locus_tag="BPP4388" FT /product="conserved hypothetical protein" FT /note="Similar to several proteins of undefined function FT including: Agrobacterium tumefaciens hypothetical protein FT Atu1999 SWALL:AAL42992 (EMBL:AE009151) (203 aa) fasta FT scores: E(): 4.3e-38, 55.94% id in 202 aa and to Ralstonia FT solanacearum hypothetical protein Rsp0525 SWALL:Q8XSF1 FT (EMBL:AL646079) (203 aa) fasta scores: E(): 4.4e-43, 62.56% FT id in 203 aa" FT /db_xref="GOA:Q7W2L8" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W2L8" FT /protein_id="CAE39667.1" FT /translation="MKIALIGITGRVGSRLADELLRRGHHVTGIARDPASVRPQPNLTA FT RQGDAAVPEDLAPILAGHDAVISAARFVSLDAKPLLAAIRQAGVPRLLVVGGAGSLQVA FT PGVALIDTPEFPDAYKPEARAGVVFLDTLRREQEVEWTFLSPSALFEPGERTGEFRLGA FT DLLLADDEGKSWILMEDYAIALVDELETPRHARRRFTVGY" FT CDS complement(212341..213270) FT /transl_table=11 FT /locus_tag="BPP4389" FT /product="putative oxidoreductase" FT /note="Similar to many e.g. Ralstonia solanacearum putative FT oxidoreductase protein Rsc0174 SWALL:Q8Y307 (EMBL:AL646057) FT (313 aa) fasta scores: E(): 7.5e-60, 58.3% id in 307 aa and FT to Lactococcus lactis putative 2-dehydropantoate FT 2-reductase Ll1323 SWALL:PANE_LACLA (SWALL:Q9CFY8) (312 aa) FT fasta scores: E(): 5.4e-12, 24.66% id in 296 aa" FT /db_xref="GOA:Q7W2L7" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W2L7" FT /protein_id="CAE39668.1" FT /translation="MRILVLGAGGTGGYFGGRAAQAGADVTFLVREARAARLREQGLRI FT KSPRGDATLAPRLVTAATPSDGYDVVVLSCKAYDLDSAIEAIRPAMGEHTAVLPIMNGV FT LQYDVLEREFGAHRVLGGLCQINASLGPEGEIVHMGQNASLVFGERAGQADSARCVALR FT QALADAAFDCRLSEDIHQDVWEKFVFLTSLAAATCLMRATVGQICSTGDGVDFMRALLR FT ESQQVAAASGHPVRPAADASALKVLTDPAQPMTASMFRDLRQGRPVEADHIVGDMARRG FT SLLGVDTPNLRVACIHLQAYQAQRAIDA" FT misc_feature complement(212362..213126) FT /note="HMMPfam hit to PF02558, Ketopantoate reductase FT PanE/ApbA, score 1.7e-34" FT CDS complement(213317..214258) FT /transl_table=11 FT /locus_tag="BPP4390" FT /product="possible integral-membrane protein" FT /note="Similar to many DedA family membrane proteins FT including: Pseudomonas aeruginosa hypothetical protein FT Pa1209 SWALL:Q9I4C9 (EMBL:AE004551) (311 aa) fasta scores: FT E(): 6.7e-58, 55.55% id in 306 aa and to Ralstonia FT solanacearum probable transmembrane protein Rsp0396 FT SWALL:Q8XSS1 (EMBL:AL646078) (326 aa) fasta scores: E(): FT 4.9e-42, 40.86% id in 301 aa" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:Q7W2L6" FT /protein_id="CAE39669.1" FT /translation="MQDIHTLLLQYGDWLVFANVLIEQAGLPIPAYPLLIAAGALSGGL FT GAWLLAWLAATLACVLADSAWYLAGRRYGGRLLGMVCKVSLSQDSCIRQTQRLYLRVGV FT RALLVSKFLPGAGALSTVMAGLTGTPYRRFVAYDLAGSLLWTGSGLLLGALFHELVGDV FT LDLLDRYGGMGLALLGALLALYIVVLGLRRWVLVRSLRVIPRITIDELVRWRADGRTPV FT VVDVRPEAQRDEQRIPGAIAMDLRAPLQDLQFDPEAGDIVVYCACPNEVSAAQLAKKLR FT AAGYRNTFALRGGYEAWRRHAGNCPGDEQAGS" FT misc_feature complement(join(213671..213736,213776..213841, FT 213887..213952,214049..214114,214145..214210)) FT /note="5 probable transmembrane helices predicted for FT BPP4390 by TMHMM2.0 at aa 16-38, 48-70, 102-124, 139-161 FT and 174-196" FT misc_feature complement(213743..214219) FT /note="HMMPfam hit to PF00597, DedA family, score 9.3e-10" FT CDS complement(214382..214819) FT /transl_table=11 FT /locus_tag="BPP4391" FT /product="conserved hypothetical protein" FT /note="Similar to many proteins of undefined function FT including: Pseudomonas aeruginosa hypothetical protein FT Pa1428 SWALL:Q9I3R6 (EMBL:AE004572) (143 aa) fasta scores: FT E(): 5.7e-30, 58.04% id in 143 aa and to Salmonella FT typhimurium hypothetical acetyltransferase Yjab FT SWALL:YJAB_SALTY (SWALL:P40677) (145 aa) fasta scores: E(): FT 4.4e-19, 42.55% id in 141 aa" FT /db_xref="GOA:Q7W2L5" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q7W2L5" FT /protein_id="CAE39670.1" FT /translation="MNIRERNYGDDFVLADIWLRSVRATHTFLSEAQIQAMYPQVLKSY FT LPSVRVWVCEDGQGGIAGFMGMSGNKIEMLFVDADKRGRGAGRRLLNFARSLHDSLRVD FT VNEQNAQAVGFYLHSGFVETGRSDTDDAGQPFPIIHMRLDG" FT misc_feature complement(214454..214663) FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 1.6e-07" FT CDS complement(214840..216639) FT /transl_table=11 FT /locus_tag="BPP4392" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0482" FT /db_xref="GOA:Q7W2L4" FT /db_xref="InterPro:IPR000834" FT /db_xref="UniProtKB/TrEMBL:Q7W2L4" FT /protein_id="CAE39671.1" FT /translation="MAVVRTGRDAPGPEGCGNLFVILLEKTFDRTLDAWLHTYHDPAWR FT GATVHGWLFEGPQARRAAEARLAQAGVRARFRSAYKPLLHYFLEEADREGLVAVHVRYP FT VHPLAQPNRFTLEAYPLAALLAGVDLRFEAGSDALHYDVTLRYADGREHYECVHAPNQP FT APGADGVDGLSPCGWLRVCDAAGEPRLDAAQNTEFQAALRTIVDTVRAHAWGMREPYFE FT RLEIRVDIPGMEFDPGVDEELLSTYEAMHEDIYFSLLEFFQGYANRPSGDRGLQPGQII FT PLVRRTDGLARVRMSIEPFEPLEPVGPAALAGPLAQTTAPLDAGQIAGQMAQLGGVPFQ FT AVSRQGRPVLGAYVAGPGPAVFISGAQHANESSGVVGALRAAQALVAGGQAHFALIAAE FT NPDGYALHARLRAEHPRHMHHASRYSALGDDIAYRERAPFFEREGRHQARAISGAQLHI FT NLHGYPAHEWTRPLSGYLPRHFELWTIPRGFFLVLRHHPGRAVQARLLMEGVTARLAQR FT LPALVEFNARQLALFRVHAQDPGLALMNGIGVQIAESTQEDLPLTLISEFPDQTVYGER FT YVFAHTVQMETVLAATELYRAGV" FT CDS complement(216673..217518) FT /transl_table=11 FT /locus_tag="BPP4393" FT /product="AraC-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0483" FT /db_xref="GOA:Q7W2L3" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q7W2L3" FT /protein_id="CAE39672.1" FT /translation="MKPKTRLYYAERLEPVLAWLAARPDADADLHRLAELACLSPYHFH FT RVYRALMGETVHATVQRMRLARASVALAQGKGSLRQVADRAGYASEAAFSRAFSAQYGL FT PPGRYRAKRSSPFNPEELRMYPLTMEDFPGLSLATLAHQGDYQEIGNTFDRLALLAATQ FT DLVRDGMQPPPRYIGVYYDDPAQVARDALRSRAGVSLPPGTAAPAPFEPLDTPAMRCAV FT LEYTGPYSEIEAPYNWLFSQWLPASGQEPGDFPMFEEYLNDPKTTPAAQLKTRIYLPLA FT " FT misc_feature complement(217186..217317) FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family, score 9.5e-06" FT misc_feature complement(217201..217335) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature complement(217336..217473) FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family, score 0.033" FT CDS complement(217606..218769) FT /transl_table=11 FT /gene="lldD" FT /gene_synonym="lctD" FT /locus_tag="BPP4394" FT /product="L-lactate dehydrogenase" FT /EC_number="1.1.2.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP0484" FT /db_xref="GOA:Q7W2L2" FT /db_xref="HSSP:1GOX" FT /db_xref="InterPro:IPR017934" FT /db_xref="UniProtKB/TrEMBL:Q7W2L2" FT /protein_id="CAE39673.1" FT /translation="MTQNLSTITCIEDLRVIAQKRVPRMFYDYADSGAWTESTYRANES FT DFQRIKLRQRVAVDMEGRSLRTTMAGSDAVMPVAIAPTGLTGMQHADGEILAARAAAEF FT GVPFTLSTMSICSIEDVAQGSGKPFWFQLYVMRDREFVGDLIDRAKAAGCSALVLTLDL FT QILGQRHKDIKNGLSAPPKPTLRNLIDLAFKPRWCLGMLGTRRRTFGNIVGHAKGVTDL FT SSLSSWTAEQFDPRLSWDDVEWIKRRWGGKLILKGILDAEDARLAAESGADALIVSNHG FT GRQLDGAISSINALPAIAEAVGSRIEVWMDGGIRSGQDVLKAVALGARGTMIGRAFLYG FT LGAYGQAGVTRALEILYKEMDVTMALCGHKHISQIDRGILMPGTYPQ" FT misc_feature complement(217624..218718) FT /note="HMMPfam hit to PF01070, FMN-dependent dehydrogenase, FT score 6.9e-208" FT misc_feature complement(217918..217938) FT /note="PS00557 FMN-dependent alpha-hydroxy acid FT dehydrogenases active site." FT CDS 218924..219208 FT /transl_table=11 FT /locus_tag="BPP4395" FT /product="probable acylphosphatase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0485" FT /db_xref="GOA:Q7W2L1" FT /db_xref="HSSP:1APS" FT /db_xref="InterPro:IPR017968" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2L1" FT /protein_id="CAE39674.1" FT /translation="MSDAHMETVHVIVKGKVQGVGYRHAAVRRAHMLGVTGWVQNLPDG FT TVEAVVQGTADQVDHMLEWLRRGPPAAQVRELASERSFEEKRYKHFAQL" FT misc_feature 218936..219199 FT /note="HMMPfam hit to PF00708, Acylphosphatase, score FT 3e-16" FT misc_feature 219032..219082 FT /note="PS00151 Acylphosphatase signature 2." FT CDS complement(219222..220193) FT /transl_table=11 FT /locus_tag="BPP4396" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0486" FT /db_xref="GOA:Q7W2L0" FT /db_xref="InterPro:IPR000834" FT /db_xref="UniProtKB/TrEMBL:Q7W2L0" FT /protein_id="CAE39675.1" FT /translation="MFKASLKALALCALAVLPMAAPAAQADWPAKPVTLVVPFPPGGST FT DVIGRYFGARLGELLGQSIVVENRPGANTGIGATAVARAPADGYTFMISGAPTYTTNSL FT LYANLNYDPIKSYEYVAIAASAPFVILTNPQTGIATVQDIVRKSASQPLSFGSFGTAST FT PHLAGEYLAQHGGAKLLHVPYRGSAPAMTDLIGNQIPLSIDTLVAALPQIRAGKVRAVA FT LTSSARSPLLPELPTVAESGVAPYDFQTWFGIVAPHGTPQAVVQRMAQALQTMLAEPGT FT QARMRELGFEPEYVDAAGFRARVEQEMARNAGVIKAAGIRIE" FT misc_feature complement(219234..220052) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.7e-84" FT misc_feature complement(219642..219674) FT /note="PS00133 Zinc carboxypeptidases, zinc-binding region FT 2 signature." FT misc_feature complement(220116..220193) FT /note="Signal peptide predicted for BPP4396 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.794 between residues 26 and 27" FT CDS complement(220232..221413) FT /transl_table=11 FT /locus_tag="BPP4397" FT /product="probable amidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0487" FT /db_xref="GOA:Q7W2K9" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q7W2K9" FT /protein_id="CAE39676.1" FT /translation="MSRWMSKARGEPLGLLHGLPVAHKDSFLTAGMRTTHGSPVFADFV FT PERSSLVVTRQQAAGAITLGKTNLPEFGAGSQTFNAVFGPTRNPYDPAMTAGGSSGGAA FT AALACRMVPLADGTDMGGSLRNPASFCNVVGLRPSPGRVPMWPTAAPYNTLSVAGPMAR FT TVADAALMLAALAGPDTRVAYAPDWGGLPVDPAVGRVLQAQLPRWEELGCRVDQACPDF FT GQADSSFHALRGLAFAINQGETVRRHRDRVKDTVIWNTELGLNQSGAVLAQAERDRAQL FT FERMHDFMQQYEFLIGPVSQVPPFSADQAYIQRIGDVEMRNYIDWMRSGYYLSLTGHPA FT ISVPCGFTETGLPIGIQIVGRYRDERGVLQLAHAFEQLTQCWRQAPALRAPAA" FT misc_feature complement(220307..221413) FT /note="HMMPfam hit to PF01425, Amidase, score 5.3e-84" FT misc_feature complement(221030..221125) FT /note="PS00571 Amidases signature." FT misc_feature complement(221213..221236) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 221669..222460 FT /transl_table=11 FT /locus_tag="BPP4398" FT /product="transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0488" FT /db_xref="GOA:Q7W2K8" FT /db_xref="InterPro:IPR005471" FT /db_xref="UniProtKB/TrEMBL:Q7W2K8" FT /protein_id="CAE39677.1" FT /translation="MPAAAAALLAERADHPLYVASVEKGMRVLEAFDAARDSLSLTDIV FT QLTGMGKSAAQRFTHTWEALGYLAKDPQSRRYRLGPKVVELSYYFLRSDHLVSLAAPHL FT VALREHCGLAVNMSVLSGDDMIYLLRLPSRQLTLVEMLPGRRIPAWSNSAGRMLLSQRD FT DASVRDLLARAAPQPYTPRTQTDPQALLAEIRQAREDGYAITQDQVLLNQMGVATLLRD FT ERRQPLAAISVTAAADEYPRARLVAEIVPQMLKAAYAICGA" FT misc_feature 221897..222454 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator, score 2.5e-32" FT CDS complement(222577..225030) FT /transl_table=11 FT /gene="gyrB" FT /gene_synonym="parA" FT /gene_synonym="nalC" FT /gene_synonym="acrB" FT /gene_synonym="pcbA" FT /gene_synonym="himB" FT /gene_synonym="hisU" FT /locus_tag="BPP4399" FT /product="DNA gyrase subunit B" FT /EC_number="5.99.1.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP0489" FT /db_xref="GOA:Q7W2K7" FT /db_xref="HSSP:1AJ6" FT /db_xref="InterPro:IPR006171" FT /db_xref="UniProtKB/TrEMBL:Q7W2K7" FT /protein_id="CAE39678.1" FT /translation="MSDQQNTTPENTGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGL FT HHMVFEVVDNAIDEALAGHCDDIVVTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEI FT VMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVA FT PLTATGPTDKRGTEVRFLADPAIFTNIEYHYEILSKRLRELSFLNNGVKVRLVDQRQGK FT EENFAFSGGVKGFVEYINRSKSVLHPNVFAVSAESSAGGVLVGVEVAMQWNDSYSESVL FT CFTNNIPQRDGGTHLTGLRAAMTRVLNKYIADNELAKKAKVETTGDDMREGLACVLSVK FT VPEPKFSSQTKDKLVSSEVRPAVEDAVARTLETWLLEHPNDAKALCGKIVEAARAREAA FT RKAREMTRRKSVLEGAGLPGKLADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAIL FT PLRGKVLNVEKARFDRLIASEQIATLITALGTSIGPDFNIDKLRYHRLIIMTDADVDGA FT HIRTLLLTLLYRQMPELVARGHVYIAQPPLYKVKVGRDERYLKDDQEEAQFMLQLALKD FT AELIPSQGAAPIRGEALNELARQYVLADAVISRLSRVFDVAALSALAEGVEIDLEDAER FT TKASAQRLSDALHAASPANGVEVVAEYDDVAEKHRLAVRRMHHGNVRVSVLDADFVRDA FT DYAVLAKSAKTFLGLVGAGAIVARGEGDKRKEQFVSDFREAMQWLRGEAERGLSKQRYK FT GLGEMNPEQLWETTMDPKVRRLLRVQIEDAIAADEVFTTLMGDDVEPRRAFIETHALSA FT GNIDA" FT misc_feature complement(222613..222810) FT /note="HMMPfam hit to PF00986, DNA gyrase B subunit, FT carboxyl terminus, score 4.7e-44" FT misc_feature complement(223393..223737) FT /note="HMMPfam hit to PF01751, Toprim domain, score FT 0.00022" FT misc_feature complement(223699..223725) FT /note="PS00177 DNA topoisomerase II signature." FT misc_feature complement(223816..224340) FT /note="HMMPfam hit to PF00204, DNA gyrase B, score 1.1e-82" FT misc_feature complement(224476..224913) FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90-like ATPase, score 1.2e-30" FT CDS complement(225125..226240) FT /transl_table=11 FT /gene="dnaN" FT /locus_tag="BPP4400" FT /product="DNA polymerase iii, beta chain" FT /EC_number="2.7.7.7" FT /note="ortholog of Bordetella pertussis (BX470248) BP0490" FT /db_xref="GOA:Q7W2K6" FT /db_xref="HSSP:1MMI" FT /db_xref="InterPro:IPR001001" FT /db_xref="UniProtKB/TrEMBL:Q7W2K6" FT /protein_id="CAE39679.1" FT /translation="MTMQLVQTTRDALLKPLSTVAGIVERRHTLPILANILMRKEGNKV FT AFIATDLEVQITTHADFGVGPENESTTVAARKLLDILKALPDTGEVKLGLASNKLSVQS FT AKSRFALQTLAASEFPTVAQPEQWDVSLSMPQRMLRHLFNMVHFAMAQQDIRYYLNGML FT LVFEPGRVRAVATDGHRLAHCATEADGIAERHEVIVPRKTVLEMQRLLEDSDEPVALDV FT APGQIRFRFGDVELVSKLVEGKFPDFTRVIPTNYTRQFSVSREALQGSLQRAAILTTDK FT FKGVRLQLAQHQMKISSSNAEQEEAQEEIDIDYSFEPLDVGFNVSYLLDVLSNIKAENV FT QWSVMPDANASALITLSDDEQFKYVVMPMRI" FT misc_feature complement(225131..225496) FT /note="HMMPfam hit to PF02768, DNA polymerase III beta FT subunit, C-terminal domain, score 5.4e-35" FT misc_feature complement(225500..225844) FT /note="HMMPfam hit to PF02767, DNA polymerase III beta FT subunit, central domain, score 2.1e-41" FT misc_feature complement(225872..226234) FT /note="HMMPfam hit to PF00712, DNA polymerase III beta FT subunit, N-terminal domain, score 1.2e-24" FT CDS complement(226237..227646) FT /transl_table=11 FT /gene="dnaA" FT /locus_tag="BPP4401" FT /product="chromosomal replication initiator protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0491" FT /db_xref="GOA:Q7W2K5" FT /db_xref="HSSP:1J1V" FT /db_xref="InterPro:IPR013317" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2K5" FT /protein_id="CAE39680.1" FT /translation="MKEFWQTCVSRLEQELPPQQISAWIRPLVPLAYDEAQAVLRVAAP FT NRFKLDWVRKNFSHQIEALAAEWYQRPVQVTFELPGTSSAPRIPMAVPRPVAVSVPAVV FT AAVQQASEPAPPAPASADAANIVYERSRLNTDLTFENFVTGKANQLARAAALQVAENPG FT TSYNPLFLYGGVGLGKTHLIHAIGNAMVAAGTGVRVRYVHADQYVSDVVKAYQRKAFDD FT FKRYYHSLDLLLIDDIQFFSGKNRTQEEFFYAFEAMVAQRKQIIITSDTYPKELSGIDS FT RLISRFDSGLTVAIEPPELEMRVAILLRKAESEGVPMPEEVAFFIAKHLRSNVRELEGA FT LRKVLAYARFHGRDVLTVDVCKEALKDLLSVSNGQITVENIQKTVADFYKIKVADMYSK FT RRPANIALPRQVAMYLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKISDARAKQAELNH FT TLHVLEQTLKG" FT misc_feature complement(226309..226368) FT /note="PS01008 DnaA protein signature." FT misc_feature complement(226309..227250) FT /note="HMMPfam hit to PF00308, Bacterial dnaA protein, FT score 1e-172" FT misc_feature complement(227107..227130) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 228052..228186 FT /transl_table=11 FT /gene="rpmH" FT /gene_synonym="ssaF" FT /gene_synonym="rimA" FT /locus_tag="BPP4402" FT /product="50S ribosomal protein L34" FT /note="ortholog of Bordetella pertussis (BX470248) BP0492" FT /db_xref="GOA:Q7W2K4" FT /db_xref="InterPro:IPR000271" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2K4" FT /protein_id="CAE39681.1" FT /translation="MKRTYQPSVTRRKRTHGFRVRMKTRAGRAILNARRAKGRKRLAV" FT misc_feature 228052..228180 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00468, Ribosomal protein L34, score FT 1.7e-18" FT misc_feature 228055..228114 FT /note="PS00784 Ribosomal protein L34 signature." FT CDS 228282..228653 FT /transl_table=11 FT /gene="rnpA" FT /locus_tag="BPP4403" FT /product="ribonuclease P protein component" FT /EC_number="3.1.26.5" FT /note="ortholog of Bordetella pertussis (BX470248) BP0493" FT /db_xref="GOA:Q7W2K3" FT /db_xref="InterPro:IPR014721" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2K3" FT /protein_id="CAE39682.1" FT /translation="MPRATLPAEARLHRPSEFAAALKGRRLARGAFFIVSASPCAPADD FT QPARARLGLVIAKRFAARAVTRNTLKRVIREAFRARRLALPAQDYVVRLHSKLTPASLT FT ALKRSARAEVDAHFTRIAR" FT misc_feature 228297..228647 FT /note="HMMPfam hit to PF00825, Ribonuclease P, score FT 5.9e-07" FT CDS 228650..228922 FT /transl_table=11 FT /locus_tag="BPP4404" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0494" FT /db_xref="InterPro:IPR002696" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2K2" FT /protein_id="CAE39683.1" FT /translation="MIRRLLIAPIRFYRYFLSPWVGRQCRFTPTCSAYAIEAIERHGAW FT RGLWLAARRIGRCHPWSPGGYDPVPPGHGAGAQACCAHRHRTEPD" FT misc_feature 228653..228856 FT /note="HMMPfam hit to PF01809, Domain of unknown function FT DUF37, score 5.2e-41" FT CDS 228998..230662 FT /transl_table=11 FT /locus_tag="BPP4405" FT /product="probable inner-membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0495" FT /db_xref="GOA:Q7W2K1" FT /db_xref="InterPro:IPR019998" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2K1" FT /protein_id="CAE39684.1" FT /translation="MIFSFSLLLLWNNWQIHNGKPSLFGGPAPEAAATQQPKADANGTA FT ASSTASIPSSPAAAPAAASVPGAAAPAAAKSEQVVITTDVLRLTFDSNGAQLIRAELLK FT YPSSSQSDKPTVLMDRSADLVYVAQTGVVGAPQGESFPTHQTPFHLVSSERSLTGDTLD FT VVFEAESGGLKVTKTYTLHRGRYDVDVRHAMANTGGAPLSPALYLQLERDGTDPAGTSS FT FYHTFTGVAVYSEQDKFQKVTFSDIEKKKGTYIKQADNGWIGIVQHYFATAWIPAQGKQ FT RTNELLQVQQNLYAARTIEAVGTIAPGSSANVDAHLWVGPQDQKAMAAVAPGLELVVDY FT GWLTIIAKPLFTLMTWLHGLLGNWGWTIVALTVIIKAVFFPLAAASYRSMARMKQVAPR FT LQALKEKYGDDRQKLNQAMMEMYRTEKINPLGGCLPMVVQIPVFIALYWVLLASVEMRG FT APWILWVHDLSVRDPFFILPAIMMATMFLQIKLNPTPPDPVQAKVMMIMPLVFGGMMFF FT FPAGLVLYWCVNNTLSIAQQWTITRNLERQAAAAANR" FT misc_feature 230081..230632 FT /note="HMMPfam hit to PF02096, 60Kd inner membrane protein, FT score 8.4e-98" FT misc_feature join(230087..230155,230282..230350,230507..230575) FT /note="3 probable transmembrane helices predicted for FT BPP4405 by TMHMM2.0 at aa 364-386, 429-451 and 504-526" FT CDS 230918..232366 FT /transl_table=11 FT /gene="katA" FT /locus_tag="BPP4406" FT /product="catalase" FT /EC_number="1.11.1.6" FT /note="ortholog of Bordetella pertussis (BX470248) BP3852" FT /db_xref="GOA:P0A325" FT /db_xref="HSSP:1M85" FT /db_xref="InterPro:IPR018028" FT /db_xref="UniProtKB/Swiss-Prot:P0A325" FT /protein_id="CAE39685.1" FT /translation="MNAMTNKTLTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAH FT FDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGA FT ADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATA FT AWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQ FT GIACYTDGEAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDL FT TKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSY FT GDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHA FT AEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAGVPEEIQR FT RQLEHFRRADPAYAAGVAKALGLK" FT misc_feature 230945..232099 FT /note="HMMPfam hit to PF00199, Catalase, score 5.3e-288" FT misc_feature 231053..231103 FT /note="PS00438 Catalase proximal active site signature." FT misc_feature 231923..231949 FT /note="PS00437 Catalase proximal heme-ligand signature." FT CDS complement(232428..233309) FT /transl_table=11 FT /locus_tag="BPP4407" FT /product="ABC transporter permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3853" FT /db_xref="GOA:Q7W2K0" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2K0" FT /protein_id="CAE39686.1" FT /translation="MTNATLPLAIARPEYEQSLAPLPADIAIQAPLPWHERLLGHAWLR FT KVLILLLLALAWEAMARYTDNDLLLPGAWQTARAFFQELGSGQLPARAALSFSVLFKGY FT AAGVALAFVLTTLAVSTRFGRDLLSTLTAMFNPLPAIALLPLAMLWFGLGQGSLVFVLI FT HSVLWAMAVNMYSGFLTVSETLRMAGRNYGLTGLRYVLGILVPAALPSILSGLRIAWAF FT AWRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDRVFAGLAAVVLIGLAVENLVFDTL FT ERVTVRRWGMQR" FT misc_feature complement(join(232476..232532,232563..232628, FT 232644..232709,232770..232835,232851..232916, FT 232947..233012)) FT /note="6 probable transmembrane helices predicted for FT BPP4407 by TMHMM2.0 at aa 99-121, 131-153, 158-180, FT 200-222, 227-249 and 259-278" FT misc_feature complement(232563..232781) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.001" FT CDS complement(233306..234121) FT /transl_table=11 FT /locus_tag="BPP4408" FT /product="ABC transporter ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3854" FT /db_xref="GOA:Q7W2J9" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2J9" FT /protein_id="CAE39687.1" FT /translation="MGAHRFDSSAEPLLRADGVTLEYKTPRRRVRATHRVSFDVLPADR FT FILLGPSGCGKSTLLKAAAGFLAPSEGQFLLDGRPIDAPGPDRVVVFQEFDQLPPWKTV FT RENVAFGLVAARRLPRAQALERATHYLEKVGLGAFADAYPHTLSGGMKQRVAIARALAM FT QPRILLMDEPFAALDALTRRRMQEELLGLWEDASFTLLFVTHSIEEALVLGNRILLLSP FT HPGRVRAELNAQQFGLHSMGSAAFQAAAARIHGLLFDVEPQAVPQRAAA" FT misc_feature complement(233453..233995) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.8e-52" FT misc_feature complement(233639..233683) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(233951..233974) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(234123..235166) FT /transl_table=11 FT /locus_tag="BPP4409" FT /product="putative periplasmic protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3855" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:Q7W2J8" FT /protein_id="CAE39688.1" FT /translation="MRSHETVRQRLARYVSASLLGAFIAVLALASPTPALAEGRIRIAE FT QYGIVYLLLNVARDQQLIEKHGRQAGVDIDVQWTRLSGGAAVNDALLSGAIDIAGAGVG FT PLLTIWDRTLGRQNVRGVASLGNFPYYLVSNNPRVKTIADFTDKDRIALPAVGVSVQAR FT VLQLASAKLWGDEHYNRLDAISVALPHPDAAAAIISGGTEITGHFGNPPFQEQELAGNA FT NARIVLKSYDVLGGPGSSTVLFATEKFRRENPKTYAAFQAALQEAAQFASAHPEQAADI FT YIRLAGAKIDRDFLIRIISNPEVQFKVAPQNTYALAVFMHKVGAIKNKPQSWRDYFFDD FT AATAQGS" FT misc_feature complement(235056..235166) FT /note="Signal peptide predicted for BPP4409 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.886 between residues 37 and 38" FT CDS complement(235210..236133) FT /transl_table=11 FT /locus_tag="BPP4410" FT /product="putative taurine catabolism dioxygenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3856" FT /db_xref="GOA:Q7W2J7" FT /db_xref="HSSP:1GY9" FT /db_xref="InterPro:IPR003819" FT /db_xref="UniProtKB/TrEMBL:Q7W2J7" FT /protein_id="CAE39689.1" FT /translation="MSHANALRQPSIAFPPDVLAHGPSQDFTVRPLNDALGAEIVGIDL FT ARALSVADFARVRRAHLDHHLVVFRDQRITPRQHIDFSRRFGRLMIHVLHQFHLAHNPE FT ILVVSNIVENGAPVGLGDAGKYWHSDISYKPLPSLGSLLHAQELPAIGGDTLFANMHRA FT YETLPRALREAVDGRRAVHSYLAKYGQLQKEGNWRPTLSAAQLAQVQEVAHPVVRTHPE FT TGRRALFVSEGFTTRIEGVAADESRQILDELFAHSTRSEHIYRHQWRDHDLVFWDNRSL FT IHLAAGCPPELRRKLYRTTIEGDAPF" FT misc_feature complement(235216..236055) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02668, Taurine catabolism FT dioxygenase TauD, TfdA family, score 1.4e-52" FT CDS complement(236263..237462) FT /transl_table=11 FT /locus_tag="BPP4411" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3857" FT /db_xref="GOA:Q7W2J6" FT /db_xref="InterPro:IPR010168" FT /db_xref="UniProtKB/TrEMBL:Q7W2J6" FT /protein_id="CAE39690.1" FT /translation="MKTIEAIERAHADLTALRRDIHAHPELAFNETRTSALVSEKLREW FT GLEVHTGLGKTGVVGVLRAGSGGKRIGLRADMDALPMPEHNRFAHRSTIEGRMHGCGHD FT GHTAMLLGAAQYLAAHRDFDGTVHFIFQPAEEGGNAGARAMMEGGLFDRFPCDAVFGMH FT NMPGMPANTFGFRAGPAMASSNRWDIVINGVGGHAAQPHRSIDPIVIAAEMVQSLQTVI FT SRSKDPLDSAVLSITQIHAGDAYNVIPGSAVLRGTVRTYTVAALDRIEEDMRRIATTLP FT QVYGATGDLDFVRAYPPLVNWEAETAFAAQVAEQSFGSGQVDRDIPPFMGAEDFSFFLE FT KVPGCYLFLGNGDGDHRLETYHGMGPCQLHNSNYDFNDALLPVGASYWVKLVQAYLPSA FT " FT misc_feature complement(236467..237432) FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40, score 1.6e-44" FT CDS complement(237520..238536) FT /transl_table=11 FT /locus_tag="BPP4412" FT /product="putative transport ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3858" FT /db_xref="GOA:Q7W2J5" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2J5" FT /protein_id="CAE39691.1" FT /translation="MMDAPVLALRNLEMRFVQSVDLAGRIANLFGAGLRTQVVHAVADV FT DLDVAPGEVLGIVGESGCGKSTLGRMAAGILRPSGGTIAWRGAPVAQMGASQRRVYELG FT VQMIFQDSYASLNPRMRVRDIIGEAPVAHGMVLSRDKAEYVAGLMRQVGLDPAYAQRYP FT HQFSGGQRQRIGIARALALKPAVIVCDEAVAALDVSIQAQVINLFAQLRQDLGLTYLFI FT SHNLSVVSHISDRVAIMYLGRVVELAPTIQVFEHANHPYTQALLAELPTLRVQRRQYRP FT IKGELPSPLAPPPGCAFHPRCPHAMPRCSVERPLLREIAPGHTSACHLNDIAAAQQA" FT misc_feature complement(237811..238383) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.3e-56" FT misc_feature complement(237997..238041) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(238339..238362) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(238533..239534) FT /transl_table=11 FT /locus_tag="BPP4413" FT /product="putative transport system ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3859" FT /db_xref="GOA:Q7W2J4" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W2J4" FT /protein_id="CAE39692.1" FT /translation="MQASLSSPPESATRPVLEVKGLKTQFATRAGVVKAVDGVDMYLRH FT GEILGLVGESGSGKSITGFSLIGLLDEPGRVVEGEIRFDGEDLRQAAPARWRALRGDAM FT AMIFQDPMMTLNPVLRVDTQMVETVLAHRRVSRGEAYQRALQVLTMVGIPAPRERLRAY FT PHQLSGGMRQRVAIAIALLNSPRLIIADEPTTALDVTIQGQILYEMRKLCEETGTALIW FT ITHDLAVVAGLADRVAVMYAGRIVETGSAADVIEHAMHPYTHGLIASIPTPDTRGKPLD FT QIPGMTPSLLNLPAGCAFRTRCPRASQACLQAPEPVEVRPAHWVRCWHAGEA" FT misc_feature complement(238806..239399) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 4.6e-54" FT misc_feature complement(238992..239036) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(239355..239378) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(239561..240481) FT /transl_table=11 FT /locus_tag="BPP4414" FT /product="putative transport system permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3860" FT /db_xref="GOA:Q7W2J3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2J3" FT /protein_id="CAE39693.1" FT /translation="MTVPVQLSPVPAPVGEEAPLRRFLSDFCASKLALLGLALLLVVVG FT AAVFAPWIAPQNPYDIGGLDILDSKLPPGSEAGDGSMRYWLGTDGLARDVLSAIIYGMR FT TSLIVGTVSVLAAFAIGATVGLIAAYFGGRIDALLMRIVDIQLSFPAILVALILLAILG FT KGVDKVIIALVVVQWAYFARAARGAALVERGKECVEAARCLSLGWGRVLLRHVLPNCMP FT PLIVIATIDLAHAIALEATLSFLGVGVPVTEPSLGMLIANGFEYLLSGHYWISFFPGIA FT LAIAIIAINLVGDHLRDVLNPRNAG" FT misc_feature complement(join(239603..239668,239768..239833, FT 239996..240046,240092..240157,240320..240385)) FT /note="5 probable transmembrane helices predicted for FT BPP4414 by TMHMM2.0 at aa 32-54, 108-130, 145-162, 216-238 FT and 271-293" FT misc_feature complement(239687..239917) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 6.4e-08" FT CDS complement(240478..241452) FT /transl_table=11 FT /locus_tag="BPP4415" FT /product="putative transport system permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3861" FT /db_xref="GOA:Q7W2J2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W2J2" FT /protein_id="CAE39694.1" FT /translation="MLATIIRRLLQTVVVMLVMSALVFAGIYMVGDPVSMLASPEATEA FT QRSAIRVSLGLDQPLWKQYLIFMGQAVRGDFGNSFLTGEPAMRLILERMPATLELACVA FT MLLSVLIGVPLGIRAGLKPKAPASRVIMTGSVLGFSLPNFWVGLMLIMIFAVTLGWLPA FT SGRGQTVSVAGLSLSVLTLDGWASLILPAATIALAKCAMIIRVTRAATRESLPQDYIKF FT ARAKGLPEKRVLGVHLLKNILIPIVTVAGLEFGQVVAFAVVTETVFSWPGMGKLLIDSI FT INLDRPVVVAYLLLIVFFLVMLNLVVDIIYTVLDPRVRLDSRQ" FT misc_feature complement(join(240511..240576,240664..240729, FT 240859..240924,240970..241035,241099..241164, FT 241360..241425)) FT /note="6 probable transmembrane helices predicted for FT BPP4415 by TMHMM2.0 at aa 9-31, 96-118, 139-161, 176-198, FT 241-263 and 292-314" FT misc_feature complement(240607..240822) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.0018" FT misc_feature complement(241378..241452) FT /note="Signal peptide predicted for BPP4415 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.980) with cleavage site FT probability 0.622 between residues 25 and 26" FT CDS complement(241472..243058) FT /transl_table=11 FT /locus_tag="BPP4416" FT /product="putative extracellular solute-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3862" FT /db_xref="GOA:Q7W2J1" FT /db_xref="HSSP:1B52" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q7W2J1" FT /protein_id="CAE39695.1" FT /translation="MISRLSRVVTCGSVIVALALGGASAALARDLVVALKTEPSSMDPQ FT YHALTPNTQISQTIFDPIVRVDEQLKPQPTLAESWTVDGKVWMFKLRPDVKFSDGTPFT FT AEDVVFTYDRIPKVPNSPSPFTLYLGAVAKTEAVDPLTVRITTKDVTPLLLVNLAQLPI FT MSKKAASGPAPEGKTTTELNSGNGLIGTGPYKFVSWKRGAEFVLARNENYWGKPPAWDK FT VTYRPMTNAAARVAALLAGDVDMIEDPPTDDLPKLKADKKLYVEETPSVRVVYLALDQY FT AEPSPGVQGTDKNPMKDKRVREALSLALNRDAIVDRVMGGVAKPAGNLLPYPMFGSSKE FT HSQAPKADVEKAKALLKEAGYPNGFSITLGSPSGRYVNDAKVAQAIASMWTRIGVKTSV FT DSMAPPVFFKNRDSYAFSAYLAGWSVTSGEMSNALTSLLVTRNPEAGLGTTNRSRYSNP FT AMDELVKQASSTMDDAKRAELLQKASNLAMDDYAMLPVHFELSVWAMKNDIRYTGRPDQ FT TTLVQYATVKK" FT misc_feature complement(241478..243058) FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5, score 4.1e-87" FT misc_feature complement(242525..242548) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(242975..243058) FT /note="Signal peptide predicted for BPP4416 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.924 between residues 28 and 29" FT misc_feature complement(242978..243043) FT /note="1 probable transmembrane helix predicted for BPP4416 FT by TMHMM2.0 at aa 5-27" FT CDS 243175..244527 FT /transl_table=11 FT /gene="trmE" FT /gene_synonym="thdF" FT /gene_synonym="mnmE" FT /locus_tag="BPP4417" FT /product="putative tRNA modification GTPase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3863" FT /db_xref="GOA:Q7W2J0" FT /db_xref="InterPro:IPR004520" FT /db_xref="UniProtKB/Swiss-Prot:Q7W2J0" FT /protein_id="CAE39696.1" FT /translation="MSLYAPIAAIATAPGRGGIGVVRISGPDLAELAQRLFGRPLTPRH FT AHYLPFRAADGEVIDEGLAIYFRAPHSYTGEDVLELQGHGGPAVLRRILARCLQAGHDL FT GLRPAEPGEFTRRAFLNERLDLAQAEAVADLIDASSEAAARGAMASLSGEFSQRVNDLS FT DRIIHLRMLVEATLDFPEEEIDFLEKYQARPTLQALTHDLDTLIAQARQGVILREGLHV FT VLAGKPNVGKSSLLNALAGDDIAIVTPIAGTTRDKVVQEIHIDGVPLHIVDTAGLRDTD FT DAVESIGIERTWKEIERADLILHLQDVTQPPDHLDAQIVRRLPARTPVLNVFNKVDLLD FT AAFQGQPDSLAISARGGIGLDALRQRLLQLAGWNPGAESPWLARERHLHALQQAAQHLE FT IATEHAREDDRVLDLFAEELRLAHEALTGITGKFTSDDLLGEIFSSFCIGK" FT misc_feature 243568..244266 FT /note="HMMPfam hit to PF01926, GTPase of unknown function, FT score 1.6e-06" FT misc_feature 243850..243873 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(244472..245746) FT /transl_table=11 FT /locus_tag="BPP4418" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3864" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7W2I9" FT /protein_id="CAE39697.1" FT /translation="MTRHSTPFAGRQVLAASFVMAIYGWGMGFYGPPVFLHAVVERTGW FT PLQWVAGMVTLHFVAGALAVANLRRLYRLAGIPMVTFCGALGSALGTFGWAVAATPWQL FT AIAALVSGASWAALGAAAINALIEPWFVVRRPAALGMAYNGASVGGIVFSPLWALLIQA FT WGFAWAAGVVGASMVLVIAVLASLVFTRTPANTGQAPDGEAVAPRPAANPAPPARPAGR FT LREDRRFVTLAAAMSLGLFAQMGLVAHLYSLLVPTLGPGTAGLAMGAATGCAIAGRTIV FT GRIAGAGSDRRLLASHAYAIQALGALLLLAAGDTPALVWLGLLLFGSGIGNATSLPPLI FT AQNEFDPASVRRVVPLIVALSQAAYAFAPAVFGMLRGVSDAASAPWLFVAAAALQAAAI FT ACLLAGRATCRCRNSKRSRPASRRW" FT misc_feature complement(join(244526..244591,244622..244687, FT 244727..244792,244808..244864,244901..244966, FT 244997..245062,245183..245248,245264..245329, FT 245366..245431,245462..245524,245546..245611, FT 245642..245707)) FT /note="12 probable transmembrane helices predicted for FT BPP4418 by TMHMM2.0 at aa 13-35, 45-67, 74-95, 105-127, FT 139-161, 166-188, 228-250, 260-282, 294-313, 318-340, FT 353-375 and 385-407" FT CDS 246304..246984 FT /transl_table=11 FT /locus_tag="BPP4419" FT /product="putative response regulator protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3865" FT /db_xref="GOA:Q7W2I8" FT /db_xref="HSSP:1KGS" FT /db_xref="InterPro:IPR001867" FT /db_xref="UniProtKB/TrEMBL:Q7W2I8" FT /protein_id="CAE39698.1" FT /translation="MRILLIEDEAELARWLSRSLARHAGFVVEWADDGLLAERRLAVEE FT FDAIILDLGLPGMDGHTLLTRIRARDDRTPVLVLTARDSLAERVGTLHQGADDFLPKPF FT VLEELEARLTALIRRSRGREHPRLTLGDLALDTASQRFTVKGQPLALSPREHAVLRALI FT QRSGEPLNKQQILDRIQSSDSDVNLEAIEVLVHRLRKKLADTGVQIVTMRGMGYCLENA FT VDNP" FT misc_feature 246304..246666 FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 7.1e-32" FT misc_feature 246742..246951 FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal, score 7.1e-15" FT CDS 246971..248434 FT /transl_table=11 FT /locus_tag="BPP4420" FT /product="putative sensor kinase protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3866" FT /db_xref="GOA:Q7W2I7" FT /db_xref="HSSP:1BXD" FT /db_xref="InterPro:IPR003594" FT /db_xref="UniProtKB/TrEMBL:Q7W2I7" FT /protein_id="CAE39699.1" FT /translation="MTTRRQEKTRHRTLKTVLLWWLIPALVFVMTGALWLSNQQLRNQV FT DIAYDRSLSGALRSIDHNISTASGGLSLEQPYLMLEFFELTANGNVYYRVATEDGLAEI FT GNPQLPLPPQPLVSGQPQFFYAEYLGQPVRVAALARPMDPPLYNDKGGRIIVQVAESLE FT TRQDFLHRALVRSVERDLAVVMISVLVVIWSVFMALRPLERLREEVASRSADDLSPVSA FT SEMPGEVQPLIHAVNLHMARFTALARVQRQFLDDASHQLRTPLSVLRTQTAYALRETDP FT QEVRTALLAMQDGLDRAVRTTNQMLALARAKDASLAEGGLPLETVDLAELADGVIRALL FT PAARARQLDLGLDVQAAPVRVQAVEWLLREALSNLVDNAIRYTARGSEVTVKVHAEGGH FT AWLVVEDNGPGMSAEDIARASVRFRRGAAGKNKSGAGLGLAIVRTIIEIHGGQLVLENR FT QPQPGLRAALVFSLGFKGNAALPHEIVVI" FT misc_feature 246971..247078 FT /note="Signal peptide predicted for BPP4420 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.940) with cleavage site FT probability 0.578 between residues 36 and 37" FT misc_feature 247019..247078 FT /note="1 probable transmembrane helix predicted for BPP4420 FT by TMHMM2.0 at aa 17-36" FT misc_feature 247715..247912 FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 3.5e-11" FT misc_feature 248057..248389 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90-like ATPase, score 1.7e-30" FT CDS 248555..249559 FT /transl_table=11 FT /locus_tag="BPP4421" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3867" FT /db_xref="GOA:Q7W2I6" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W2I6" FT /protein_id="CAE39700.1" FT /translation="MHTLAKFRATAAALAGLCALFIGNAAHAASDEPRRPECIAPAQPG FT GGFDLTCRLATEGLKQSGALKAPMRIVYMPGGIGAVAYNNIVAQHPGEAGTIVAFSGGS FT LLNLAQGKFGKYSVDDVRWLAGIGADYGVAVVRNDSPYTDLKGLMEAFKQDPTKIVLGA FT GGTVGSQDWMKAALTAKAAGVDFKKMRFVAFEGGGEAVTALRGGHIQAYMGDAAEAFTM FT LEGGAPIRVLAVFNSERLPGKLNNVPTAKEQGYDIVWPIIRGFYVGPKVSDKDYQFWVD FT AFDKTMTSPEYAKLREQQGLFPFSKTGKDLDDYVKQQVKNYAELADSFGLIKK" FT misc_feature 248555..248638 FT /note="Signal peptide predicted for BPP4421 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.996 between residues 28 and 29" FT misc_feature 248705..249547 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.5e-07" FT CDS 249610..250101 FT /transl_table=11 FT /locus_tag="BPP4422" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3868" FT /db_xref="UniProtKB/TrEMBL:Q7W2I5" FT /protein_id="CAE39701.1" FT /translation="MRTQSGRSAPCSRIGYGIMNDRMLGVFALILAAFMTWAGWDIEAP FT FAYEPVGPRAFPMLVALIIGLCGLRLAYKGGHQVETNSAGANARIALMVAYAAAYAFLF FT QWLGFVIATALMTVAVGRLFGGNWIKCAIGGLIMGVLFFLLFDKVLDVVLPAGLLEGLL FT " FT misc_feature 249610..249723 FT /note="Signal peptide predicted for BPP4422 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.641) with cleavage site FT probability 0.637 between residues 38 and 39" FT misc_feature join(249676..249729,249772..249825,249883..249951, FT 249979..250047) FT /note="4 probable transmembrane helices predicted for FT BPP4422 by TMHMM2.0 at aa 23-40, 55-72, 92-114 and 124-146" FT CDS 250098..251621 FT /transl_table=11 FT /locus_tag="BPP4423" FT /product="putative membrane protein. Also similar to FT BP3051, 42.886% identity (43.776% ungapped) in 492 aa FT overlap." FT /note="ortholog of Bordetella pertussis (BX470248) BP3869" FT /db_xref="InterPro:IPR002823" FT /db_xref="UniProtKB/TrEMBL:Q7W2I4" FT /protein_id="CAE39702.1" FT /translation="MSGILDHLAIGFGVAFSLTNVLVAAIGSFFGTMVGVLPGLGPING FT VAMLIPIAFAMNLPPETALILLAAVYVGAEYGGRITSILLNVPGEASAIMTTLDGYPLA FT RQGLANVALSLSAWSAFFGAIVSVTGIILLAPLLAKWALAFGPAEYFVLMVFAFCCLTS FT LLGKQPVKGVLAAMIGLGISVVGVDSNSGVYRYIFDSVHLSDGIDFVVVVIALFAVSEM FT LEMLEKVVAGHSIEVKPSGRKLFNLKELSFTWWSVVRSSLVGFGVGVLPGAGASVAAAV FT AYSQEKRIIESKDPDAKFGKGDMRGLVAPESAATASAIGSFVPMLTLGVPGSGTTAVMM FT GALTLYNITPGPVLFDSKPELVWGLIASLFIANVLLFIMNVPMVRVFSKVLAVPAWMMV FT PGILCISYIGVYAINAGTFDLLMVVAIGALGYFLRKFGVPMAPLVLGVVLGDMMEQNLR FT RALSITNGDPVVLYSSPVSIGLWIAAAVVVIVPQLMRRLSARRRQAAQS" FT misc_feature join(250131..250199,250242..250310,250428..250496, FT 250524..250592,250611..250679,250881..250949, FT 251052..251120,251178..251246,251265..251333, FT 251376..251444,251502..251570) FT /note="11 probable transmembrane helices predicted for FT BPP4423 by TMHMM2.0 at aa 12-34, 49-71, 111-133, 143-165, FT 172-194, 262-284, 319-341, 361-383, 390-412, 427-449 and FT 469-491" FT misc_feature 250155..251432 FT /note="HMMPfam hit to PF01970, Integral membrane protein FT DUF112, score 6.8e-29" FT CDS complement(251697..252890) FT /transl_table=11 FT /locus_tag="BPP4424" FT /product="probable aminotransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3870" FT /db_xref="GOA:Q7W2I3" FT /db_xref="HSSP:5BJ4" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q7W2I3" FT /protein_id="CAE39703.1" FT /translation="MLVHIPTIAMIRSKLPDVGTTIFTVMSRLAIEHKAINLGQGFPDF FT DPDPELCALVGKAMAAGHNQYPYMPGVAPLREAIAAKVKTLYGHAYDPETEITVTSGAT FT EALMATVLAAVGPGDEVVVIEPCYDSYLPAIRLAGGTAVPVPLRAPTRDDPYYRIDWQR FT VRDAIGARTRLLMLNFPHNPTGAVLDESDLDALESIVRETGVLLLSDEVYEHIVFDGKP FT HASLSRRPLLAEHAFVIASFGKTYHTTGWKVGYCCAPRQLSAELRKVHQFMVFTVSSPM FT QFALAEYMANPKPYLDLPAFYQAKRDRLAAGLANTRFRPLPSPGTFFMLADYSEITKHA FT EADFARHLTIDHGVTVIPVSAFYQNPAAPESNHHLVRFCFAKQDATLDAAIERLAHV" FT misc_feature complement(251706..252638) FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 3.6e-18" FT CDS 253263..253469 FT /transl_table=11 FT /locus_tag="BPP4425" FT /product="putative cold shock-like protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3871" FT /db_xref="GOA:Q7W2I2" FT /db_xref="HSSP:1HZB" FT /db_xref="InterPro:IPR019844" FT /db_xref="UniProtKB/TrEMBL:Q7W2I2" FT /protein_id="CAE39704.1" FT /translation="MAQKGKVKWFNADKGYGFITPDSGGTDVFAHFSAIQGRGYRSLNE FT GQEVEFEVKDGPKGPQAAEIRPL" FT misc_feature 253266..253463 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00313, 'Cold-shock' DNA-binding FT domain, score 1.9e-39" FT misc_feature 253308..253367 FT /note="PS00352 'Cold-shock' DNA-binding domain signature." XX SQ Sequence 255260 BP; 42597 A; 89418 C; 83408 G; 39837 T; 0 other; cccggcgcgc ggcggccgcc gggccgccgc gccagaacca taccctggag aatgcaatga 60 ccgaaccgac ctttgccacc cgcgccgcgg cgctgcgcca gcgcaacgac gagctggccg 120 ccagccagcc cggccagcgc gcccgcaacc tggcccaggc gctcggcgtc tcggaagccg 180 aatggatcgc ggccggctgc aacggcgcgc gcgtcaccgc gctgcgcggc aagccgcagg 240 ccatcttccg cgacctgggc gagctgggcg aagtcatggc cctcacccgc aacgactggt 300 gcgtgcatga acggcacggc cgctacgagg acatccaggc cgaggggccg gtgggcctgg 360 tgctggggcc ggatatcgac ctgcgcgtgt tcttcaactg ttgggccagc gcctgggccg 420 tcgaacagga cggccacacc agcctgcaat tcttcgacgg cgcgggcgtg gcggtgcaca 480 aggtgtaccg caccgaagcg accgacggcg cggcctggga ggcgctggtc gcccgctacg 540 cgggcgagcc cgaatggccc gagccgcagc cctatccgcc cgccgacgac gccgccgccg 600 tggacgatcc ggccgcgctg cggcgtgact ggctggccat gcaggacacg cacgagttct 660 tcccgctgct gcgcaggctg aaggtcgggc ggctggcggc cctgaaggcc gccggcgccg 720 acctggcgca acaggtgccg gccgagacgg tcgagcgcat gctgacgcag gccgcggcca 780 gcggcctgtc catcatgtgc ttcgtcggca accgcggcat gatccagatc cacaccggtc 840 cggtcgagaa gctgcgccgt accggcccct ggtacaacgt gctggacccg cgcttcaacc 900 tgcacctgaa caccgagacc gtcgattcgg cctgggtggt cagcaagccc accagcgacg 960 gctgggtcac ctcgctggag ctgtacacgg ccggcggcga gctgatcgtg cagttcttcg 1020 gcgagcgcaa gcccggcaag cccgaactga ccgcctggcg ccaactgctg tctggcctgt 1080 gcggccagcc gctggccgag tgaggcaggc catgaagcgc ttgctggcat ggctattggc 1140 gatggcctgc gccggggccg cggcgcaggg cgcgccggcg cggcgcgtcg tcacgctggg 1200 cggcaccgtt accgaaatcg tctatgcgct gggccagggc ggccgcctgg tcggcgacga 1260 cctgtccagc ctgtacccgc aggcggccac gcaactgccg cgcatcggct actaccgggc 1320 ggtgccggtt gagggcgtgc tggcgctcga acccgacctg gtgctggcct ccgaacaggc 1380 cggaccgccc gacgccatcg agcgcctgaa ggcggtgggc gtccgtgtcg cggtcgtctc 1440 cgaccaggcg tcggtgcagt cgctgcatgc gcgcatacgc gccatcgccc aggcgctgga 1500 tgccgtgccc gagggcgagc gcctggccgc ccagctcgat gccgagctgg cccggaccga 1560 ggcgctgccg gcctcgggcg cgcgcgcact gctgctgatg aaccgcaccg gcacgcccct 1620 gggcgccggg cgcgacaccg cggcggacct gctgctgcgc ctgtcggggc tggccaacgc 1680 gctggccggc caggagggct acaagcccgt gtcggccgaa gcgctcgggg cgctggcgcc 1740 cgaggtcatc gtggtgaccg cggcctcgct ggcggcatcg ggcggcctgg agaagctgcg 1800 cgcgcaacca ggaatcgccg ccacgcccgc cgcgcaacgc cagtgcatcg tggtcatgga 1860 cgacctgctg gcgctgggaa ccggcccgcg cctgccgcag gcgatccgcc aactcaagga 1920 gacgccttgt gtcgctggcc acggcacccc gcccgcccgc tagccggcgc catccggtcg 1980 cgctgctgct ggcgctgggc gctgccttgc tggcggtggc cgtcctcgcc gccgccagcg 2040 gcgcggtgca tattccgctg gccgacctgg cgcgcctgat cggcggcgac agtacgccgc 2100 gcgatgcgct gtggcgcaac gtgctgttcg acatccgcct gccgcgcgtg ctgttcgcgg 2160 ccaccgcggg cgcggcgctg gcgatctgcg gcgcggccat gcaggcgctg tttcgcaatc 2220 cgctggccga gcccgggctg gtgggcattt cggccggcgg cgcgatgggc gcggtgctag 2280 ccatcgtgct gacttccggc ggcttcgcca tcacggcgcc ggcggccttc gccggcagcc 2340 tgctggctac cggctgcgcc tacgtgctgg gacgccgcgc gcatggcgtg gcgggcctgc 2400 tgctggccgg catcgccatc aacacggtgg ccggcagcgt gatcggcctg ctgaccttca 2460 tggcctcgga cgcgcaactg cgcgacctca cgttctggag catgggcagc ctggccggcg 2520 cgcgctggtc gctgctggcg tttctggcgc cctggacctt gctgtggtcg tggtggctga 2580 tgcgccagtg gcgcgccatg aatgccctgc taatgggcga gcgcgaggcg caccacctcg 2640 gtttcgcgct gcgctcggta cggcggcaac tggtgctggc caccgcgctg atcgtcggcc 2700 ccctggtggc ggccaccggc ggcatcgggt ttgtcggcct ggtcgtgccc cacctgatac 2760 gcatgacgct gggcgccgac caccgctggc tgctgcccgc ctcgatgctg gccggcgccc 2820 tggccctgac gctggcggac tggctggcgc gggtggtcat cgtgccggcg gaactgccca 2880 tcggactggt caccagcctg gtgggcggcc cctttttcct gtggctgctg gcgcgcggcc 2940 gccgtctctg accgcagcaa cgcccatgac cctgcaagcc cgcaatctga ccttggcgcg 3000 cggcggcgcg cccatcctca ccgacgtgtc gctgacgctg gcgcccggca cgctggtggg 3060 gctgctgggc gccaatggcg ccggcaagtc caccctgctg gcggcgctgg ccggcgaact 3120 ggcgccgcgc tcgggccagg tctacctggg cgatgcggac ctggcgacgt tgaacgcgcg 3180 gcagctggcg cgccgccgcg ccgtgctgcc gcaaaaaccc tcgctgtcgt tcgacctggg 3240 tgtcagcgac gtggtcggca tgggcgccta tccgtttccg gaactggatc cggccgccgt 3300 gcgccagctg gtgcgcgacg cgctggagca ggcgagcgtg acccacctgg cgcagcggcg 3360 ctatccgcag ctgtccggcg gcgagcagca gcgcgtgcag ttcgcgcgcg tgctggcgca 3420 gtgccatgcc atgcacgcgc ccggccagac ccgctacctg atgctggacg aacccatttc 3480 caatctggac cccaggcacc agatggaatt gctggccacg gcgcgggcgc tggcccacga 3540 ggccggcatg ggcgtgctgg tgatcgtgca tgacatcaat caggcggcgc gctggtgcga 3600 cacgctggcg ctgctggccg atggccggct ggccgcgctg gggccgcccg ccgacgtgct 3660 gacgccggac cacatgcggc gcgtctatgg catcgaggcc gatgtgctgg cgcatcccac 3720 cctgcccggc cgcctgctgg tgctggcgcg ctgagcctca agcgccggtt tcgagttggc 3780 gcagccaggc ctgggcggcg tcgagctcgt gctcgctgaa cacgcgcacg ccgacgcgcg 3840 tcaggcaagc cgccgtcacg ccttcgcgcg cgatgcgcgc gccgctgaaa ctgccgtcgt 3900 acgtgtaccc gctgccgcac gacgggctgc cctccttgag cacggcaacg cggatgccgc 3960 gctcgcgcac cagcgccagc gcctgccgcg cgccctcgac gaaagcggcg ctgacgtcga 4020 cgcccgaggc ctcgcgcacc tgcgccaggc cgtcgagcac cgcggcgccc ccggcgccgg 4080 cggcgatttc cgccggcgga cgcggcgtgg gcaatccgcc ggcgacttcc gggcacaccg 4140 ccaccacgcg ccgctcggcc tgccagcgcg ccagcaccgg atgtccggtc gcggcatcac 4200 gtccgtcgta gcgcaccggc cggcccagca ggcaggcact gaccaagacc cattccatcg 4260 cggctctccc ggcgcccggc gggcgccaca gccgctactg tagcgctgtc gcgccgcccc 4320 cggcgcgggc gcgggggtac ggccgaattc ggacgcaagc cgccggaggc cggcgcggcc 4380 gcgcggcgct agactggccg gtatggatac ttgcccgaac acggtgcagg cgcgcatcgg 4440 cgcgctggac tggccggccc tggaaaccgc gctcgatgcg cgcggcgccg ccgtcgcgca 4500 cggcctgctg gatgcgcgcg aatgcggcga gctggccgcc ctgtacacac agccgcggct 4560 gttccgcagc cgcatcgtca tggcccggca cggcttcggc cgcggcgagt accagtattt 4620 cgcctatccg ctgccgccgc tggtggcgca gctgcgcacg gcgttctatc cgccgctggc 4680 ggccgtggcc aaccgctgga atgcggcgct gcgcgacccc atgcgctatc cggcgcggca 4740 tgccgactgg ctgcatacct gccaccaggc cggccaggcg cgccccacgc cgctgctgct 4800 caagtatggg ccgggcgatt acaactgcct gcaccaggac ctgtacggcg aacgggtgtt 4860 ccccttgcag gtggccatcc tgctgtcgcg gcccggccgc gacttcgacg gcggcgagtt 4920 cgtgatgacc gagcagcgct ccggacacgc ggcgcgcgcc gaggtcatgc cgctggcgca 4980 gggcggcgcg ctggttttcg cggtcaaccg gcggccggcg caaggcgcgc gcgggctggt 5040 gcaggccagc ctgcgccatg gggtgagcga actgcgggcc ggccaacgct ataatacgat 5100 aggcatcatc ttccacgacg ccacctgaga cgcagcgcca tgcaagccga cctcttcgac 5160 gccgagcaaa ccggcatccg cacgcgcctg ggcgagcagg cgtgggtgct gcggggtttc 5220 gccctgccct ggctggacgc cttgctgccc gccttgcgcg cggtcatcgc gcaggcgccg 5280 ctgcgccata tggccacgcc aggcggtttc accatgtcgg tggcgctgac caattgcggc 5340 gcgctgggct ggaccaccga cgcgcacggc taccgctacc ggcccgacga tccgcagacc 5400 ggcttgccgt ggccgccgat gccacaggcg tttgcgcaac tgacgcgcga ggcggcggcg 5460 caggcgggct ttgccggctt cgatcccgac gcctgcctgg tcaaccgcta tgcgcccggc 5520 gcgcgcatgt cgctgcacca ggacaagaac gagcgcgact tcggcgcgcc catcgtgtcg 5580 gtgtcgctgg gcctgcccgc catgttcctg ttcggcggcg cgcggcgcga cgagcggccc 5640 gcccgcatac cgctgctgca cggcgacgtg gccgtatggg gtggcgtgga ccggctgcgc 5700 taccacggcg tgatgccgct ggccgagggc caacatccgc tgctgggccg ccagcgcatc 5760 aacttcacgc tgcgccgcgc cggcgcctga attcggccgc aagcgccggg atgcgcggca 5820 cgcgcgcgcc gcatacagtc aaggcgccat caaaccagga gcgcatcatg catttctttc 5880 aggcccaact cgaatcgccc ctcggcgccc tgagcctggt caccgacgac cggcagcagg 5940 tacgcgcgct ggagttcgcc gactcgccgc aacgcctgcg gcggctgctg cacctgcact 6000 acgggacatg caccctgcgc gaggcgccgg ccccggcggc catcgccgcg gcgctggcgc 6060 actacttctc ggggcagtgc gacgcgctgg acggcattgc caccgccacc ggcggcagcg 6120 cgctgcagca gcgggtctgg caggcgctgc gccggattcc ggtcggcgag gtcaccagct 6180 acggcgcgct ggcgcggcaa ctggggcatg acgaccgcca ggccgcgcgc gccatcggcg 6240 gcgccaacgc ggccaacccc atcgccctca tcgtgccgtg ccaccgcgtc atcggcaagg 6300 atggcgcgct caagggctat gcctgggggc tggagcgcaa gcgctggctg ctggcgcacg 6360 agaacgccgc ggcggggctg ttgcgcgagg ccggctgagc cgtttgcaac gccggcaacg 6420 gcgccatata caagcgggca aggacgttgt accgtcgcgg aacttcttct cccgcatcct 6480 ggcgcccgcc gcatgtaccg caccgaccgc ctctacagcc cccctgcctg gcctgtaacc 6540 cgctggctgg ccgatcccgg acggaacgtg ccggacgaca tccgccaggc gctgctcgca 6600 ggcctgttcg gcacgatttc gatcttcgtg ggcggcgtgc tcaacagcgt gctggtggcg 6660 ctgatcatcg ccatccgcct gccgcaggcg ccgttcatcg catggctggc gttcgagctg 6720 gcctgctgcc tggcgcgcgc cgtcgtgctg gtgtcggcgc gccgcgccgc cgcggccggc 6780 cggcccaccc ataccgacgc ctatatcgtg ctgaccgtgc tgtgggcgtg cagcgtgggc 6840 tacggcacgc tcatcagcgt ggccagcggc gactgggtcg cggcgatcct ggcctgcctg 6900 tccgccgccg ccatggtggg cggcatctgt ttccgcaatt tcagcgcgcc gcgcctgacc 6960 gcgctgatga tctgcgtgag cctggggcct tgcaccaccc tgccctggtt caccggcgag 7020 cacagtctgt ggatcgtcag cgtgcaattg ccgctctacc tggccagcat gacggtggcg 7080 gcgtaccgct tcaatcgcat gctggtggcg accatgcagg ccgaacgcga cagcgaccgg 7140 ctggcgcggt gcgatgcgct gaccgggctg ctgaatcgct tcggcctggg cttcgcgctg 7200 gagcgcgccg tggcggcaac gcgccgcgac ggaaacgagt tcgccctgct gtacctggac 7260 ctggatggtt tcaagtcggt caacgacacc cacggccatg ccgccggcga ccggctgctg 7320 cgcgacgtgg cggcgcggtt gacggagctg gcgccggccg acgcggcgat cgcgcgcatc 7380 ggcggcgacg agttcgtgct gctggtgcgg aattgcgacg aggcctgcgc caccgcgttg 7440 gacgatcgca tcgtggcgcg gatctgcgag ccttacgacc tggggacgcc gcgcccggtc 7500 cgcattggcg gcagcgtcgg catcgcgctg gtgccccgcc atggccagga gatgacggcc 7560 atcctcaagg ccgccgaccg ggcgctgtac ctggccaagt cggccggcaa gtcgcgcacc 7620 gcgctggccg cctgagcggc caggctactg cgcgaccggc tgccagccgg ccaggtcggt 7680 acgcatgccc accgcgcccg cgccgcccag gtcgcgctgc agcacctggc cgctggtgtc 7740 ggcggcaaag gtgtacacgc cgctgcgccg gtattgggcc ggccaggcca ccacgcggaa 7800 atccttgccg tcgggcgcag cctccacccg gaaccggtag ccggcatacg cctggtcgag 7860 cggcgtatcc gcgcccatgg ccagggcgtc gggcccgaag ggcggcgcgt cggcctggtc 7920 cgccgccggc cagtacaggc cgtcgcgatg ctcgggccgg ctgaccagcc ggcttgcgta 7980 gcgcccctgc cccggcccct gcgcatagcg cgcctgcgcc tgcgccagtt gcctcacgcc 8040 gtcgatggcg gccagttcgt tgcgcccgat ggtgcgccgg cgcatttcgg ccacgcccgc 8100 ctgcaggtcg aagcgccatt gcccctggcc gccgcgcgcc atcggaaccg gaaaggtcca 8160 gcccgagagc cccaccgcca gccaggcgcg ccggtcgccc tcgctctgga tgtcgtggcg 8220 gtcggcccac gcggccagga aacggtagat cgcctgcgtg tgatcgccgg ccgggaacac 8280 ctggcggtaa ttggcgccca gcacgcgcgc cagcgccgtg tcgtcggacg tggcgatggc 8340 gtcgaccagc gcatcgccgg cggcctgggc cgtggggtaa ggcgcctggg ccatggccgc 8400 gccggcggtc gcccaggtca gcgccagggc gcccaggacg cgccggacca tcggatgctt 8460 gttgtgcatg ctcatctccg gccatgaccg aaatggtggg cgccgccgcc catgccgccg 8520 cggccgccaa agccgccgcg ctgttgcgcg aagtcgccgc gctgggtctg ctggcgcatg 8580 cgcgcgccgt cgccggcgtc gtgcagcgcc ggcgtgcggt tgaattgctc ggctcgctcg 8640 cgcgccgcgg cctggtcggc gtgctggcgt tgcatgccgt ccgcgtgagc cggattgtgc 8700 tggcccggtt ggcgctgccc ggcgcccgcc tggcccggcc ggctgccgct cggccgggcg 8760 tcgcgcccag gcgccccggc gcgctcgccg ccatgcccgg gaccgccgta accggcgacg 8820 gcatggccgg tatggccttc gaacgcctgc gcggcgcgct gccgctcggc gtcgatcgac 8880 cctccgcccg cgcgctggcc ggcctgcgcg cggcgctgct ggccggcctg gcgctgcgcg 8940 tcgaagcgct ggcggctggc gctgtcggcg taggccgcgc tgccgcgatt ggcggcgttg 9000 tgctgccagt ccacccgcgt gttgctggtg tcgatacgat ggttgatgtt gacgttgttg 9060 tagcgattga cgtcgatatc gacgtcattg tgtccccagt cgaagccgcc ccacatggcg 9120 tcgaccgccg ccacgcccag gccgaagccg atgccgccga ccagggcggt cgcgaaggcc 9180 gagccgggcg gcggcggata gtaatagggc ggataggccg gatacggcca ggcgccgtac 9240 accacggtgg ggttgtagct gggaacgtag accacctgcg gatcggccgg ctcgaccacc 9300 acgacggtct tgccggcgct ttcggtggtg gtgactttct gctgcttgtt gctggtcagc 9360 gtgccggcct tcctggcttc ggtgcgcagg cgctgcacgg aatccatgac gtcgtcgggc 9420 tgcgccagga aggcatcgcc cagcgacttg acccattgcg gctggcgccc catcagatcc 9480 atgaccgacg gaaacgccac cagggacttg acgctgggat cccacggctg gccttcggcg 9540 gccttgacgg cggcgtcgcc cgaatccttg ggatgatcgg cggaccattt ggccgcggcg 9600 gccacgtcgt cgggataggt ggcggccatc agcacctgcg acagcagcga atcgggatac 9660 agggccaccg gcgccagcaa ctggtcgagc cgggcgttgt ccagcttggc ctgcgcctgc 9720 gcggaaccgg cccatatcgc ccccagatac agcagactca caagcagata gcgcaatcgc 9780 aacatatccc actcccagga gtttgcccgt cggacggcca gcggcccccg ggtccgggga 9840 acgccgtttg ccagcgtaac ggctggcgcg caatttgaga agcggcgcgt ggcgctcagg 9900 cgtaggccgc cacccgcgca atgcagcgat gcaacacatc gcgcaccacc cggttcatgg 9960 cccgcgcccg gcgttcggcc agcacgatca ggcccacggt cggcatgcgg aacgggacgg 10020 gaaacgcctt gcagcgcacg ccgccccagc gctcgagctc ctgtccgata tcgagcggca 10080 gcaggcccag cgacgccata ttgctgctga tggccgagtg gaccaggcgc gccgaagtgg 10140 tttcgatgcg cgccaccggc gcgacggcat tgcggctgac gaaggcctcc acgaacgcca 10200 tgcgcgtcgg gctggacgcg ggcggcagca cccacggatg gccgtgcagc gacgccagcg 10260 tcaggctggc gcgccgctcg tacagcgcct cgctcatcac gatcgacgcg gtctgcgaga 10320 acaggccctc ctgcgccagc gtgtcggcgc cggcgtccgc cgaaagccgc ccgatcacga 10380 tgtcgagctc ctggcgccgc agcgcaagca ccaactggtc cgtggctcct tcgaaggtgc 10440 tcaccgacat gcgcaagggc tcgcccgtga gggtcttgag cacttcctgc atcagggcgt 10500 tggacacgaa cggaatcacc cccaggcgca ggtgggcgcc gcgcccttcc tcgaacgcgc 10560 gcaactcgct gtgcagcgcg ccggcgtcgg ccatcagcag gtccacgcgc gccaggatgt 10620 gccggcccac cgcggtgggc gccagccgcg cgccccgctc gcgcgagaac acctgggcgc 10680 ccagttccgc ctcgatgtcg cgcaaggtac ggctgagcgc cggctgcgtg agcccgcgcc 10740 gttcggccac ggcggtcagg gagcgggccg cggcgatctc gcgcagcaac tgcagatcgc 10800 gaaaccgcag ccgggcaaac ggaaccgggt cgctaggggc ggaatcgtac attacgggta 10860 aaccctgggt tttgcataac aaaaatggta tcacttcaaa caactgaatc acacgaaaat 10920 catgcaactc aggaaaacca ccatacgggg aatgccatgc agcatctaca cagacctacg 10980 cggctcatgg gcgcgatagc catcatcacc accgcgttcg cgctggccgg cgtgccggcg 11040 caggccggcg ccgcgccgtc cgaccagccc ctgcgcatcg tcgtccccta cgcccccggc 11100 ggcaccggcg acgtcatcgc caggctggtc gcgaagaaac tgggcgagca atccgggcaa 11160 tcggtcgtgg tcgagaacaa gcccggcgcg gccggctcga tcggcgcgtc gaccgtggcc 11220 cgcgcggcgg ccgacggcaa taccctgctg ctgggctaca cctccgagat ggtcatcaac 11280 cccatcgtgc aaaaaggcgt gagctacgac gtggcgcgcg acttcgcgcc cgtggcgatg 11340 gcgggttcga cgccgctgct gctggtggcc aacccgacgg tcggcgccaa ctcgatcgcc 11400 gagctggtcg cgctggccaa ggccaggccc aatcgccttt cgtatgcctc ggcaggcccc 11460 ggcagcccgg cccatatcgc cggcgcgctg ctggcgcgcg aggcaggcat acagctgctg 11520 cacgtcccat acaagggcgg cagccaggcg gtcaccgaca cggtgggcgg cgtggtcagc 11580 atctacttct cgggcatgcc gccggcggtt ccgttcgtca agaacggcaa gctgaccgcg 11640 ctgggcgtca ccgcccgcca gcccagcccc gccctgcccg atgtgccggc gctggccgcg 11700 caggactacc cgcggctgga tctggccggc tggttcggct ttttcgcgcc gcgcgaggtg 11760 ccggcgccgg tgcaggccgc gctgcacgac cgcatcaccg ccgccctggc cgccgacgac 11820 atcaggcagg cgctggccgt gcagggcgtg gaaacccggc cgatgagcgc gcaggccttc 11880 ggcgacttcg tggccgccga acagaagaag tacgcgcgct tcatcgacga actcggcatc 11940 gcggccgaat aacgaggaac aagcatgaat ctgtggttac tgggcaccgg aacgcccacg 12000 ccgtccttgc ggcgcatgtg ttcgggctat ctcgtgcgcg tcggcgacga atacctggtc 12060 ttcgaccacg ggttcggcgc gcaccatcgc atgctcgaac tgggcgtgcg cgccacccag 12120 gtctcgcacg ccttcttcag ccatcaccat tacgatcaca tgggcgacta tccgcgcctg 12180 ctgctgaccc gctgggacca gggcgtgggc agggtcgacg acatggacgt ctacggaccg 12240 ccgccgctga agctgatcac cgagcgcctg atcggcgacg acggcgcctt cggcccggac 12300 ctgatctcgc gcacggagaa ccagtgcagc atcgacgtgt accaggcgcg cggcggcacg 12360 ggcatgcgcg cccgcccgca gccccgcctg cacgaactgg ccgcggatgc ggtggtgcgc 12420 acgccgggct ggaccgtgcg cgtggcgccc gtgaaccact tcgcgccgca cctggtgtcg 12480 tatggctacc gcctggacgc ggacggacag tccttcgtgt attccggcga taccggcccc 12540 agccgcgcgc tgcgcgagct ggcccaggat tgcgacgtgc tggtccatat gtgccactac 12600 gtctcgggca ccgcccccag caagaccttc gccgcgttca cgatggggca ccgtgagctg 12660 gccgagctgg ccgccgaggc caacgtccgc aacctggtca tctcgcacgt gaccgaacag 12720 ttcgaccacc ccggcatgcg cgagcggatc gtgcgcgaag tcggggaaat ctaccggggc 12780 aatatcttct tcggcgagga cggcatggag attcccttcg ccggtccgcg ccagacccgg 12840 ctggattgaa cgcggcggcg ccggaacgaa acggcgccgc gcccgcccgc gcctacccgg 12900 cccgatgggc gtcgaccgcc gccaggatcc ggccgaacag cgcgtccgcg taggcggcat 12960 ccagccagcg cacgatgacc accatgcgcc gctcgggctc gacccaggtg aacgagctgc 13020 ccgcgccgat gccgaagaaa ctggacgccg gcacgctggg aaacaccttc ctttcgtggt 13080 tgagccagat caggtagccg tagtagggcg cgatgtcgca gggagtgcgc atcgcctgga 13140 tccaggccgg cgacagcacc tgccggccat cggccgcgcg gccttcgtcg agcagcatgc 13200 ggccgatcag cgcctggtcg cgcgcgctga tcgacatgcc gccgccccag tgcgtgccgc 13260 ccggcaccga cggcatgcgc acgccgtcga tatccaccca ggcattgtcg tagcccaccc 13320 actgccagtc ctcgctggcg cccagcggcc tcgtgaccgc ctcgcggaac acctcgggca 13380 agggccggcg aaacagatgc agcagcgcat acgaaagctg gttgatgcgt acgtcgttgt 13440 attcccagta ggtgccgggc tcctgcagcg gccgtgcgtc gcccttcctg ccgtcgggcg 13500 ggatgccgaa ggccaccgcg cggtagcggt cggcctggtc gggcacgccg aagcgctcgc 13560 cctcccattc gctggtctgc tgcagcaagt ggcgccaggt gatccgcgca ttgcggccgg 13620 cgtcgaaacc gatgcccggc acgcgccggc ccaccggctc gtccacgtcc ggcaacaatc 13680 cgcggtcgtg cgccacgccg gccaggatgg acaggtacag cttggccacg ctgaaggtca 13740 ggtcggcgcg ctcgggctcg ccccacgacg ccagcgtctg gccgtcgacc acgaccacgc 13800 ccgagaccgg gccgcgatcg tgcaccggac ccagcaggcg gttccagggc ggcggatcat 13860 cgaggtgcac gccgaagttg ccctggacgc tgcggtccca ggcggtttcg tgatcgttgg 13920 cgaactggat cgcctgctgc atgagggggt tcatcgctat cctctccatg atgcggttca 13980 ggcaggctgc ccggacgggg tctgggccag gaacgccatg gcggcctgca cgccgccggc 14040 gcggtgcggc acacccgcgg ccgccaggcc catctcgacg ccggccagcg tgccgcacag 14100 catcaagtcg ttgaaataac ccaggtggcc gatgcggaat acgcggtcgg ccagcttgcc 14160 caggccctgc cccagcgaga tatcgaagcg ctccagcgcc cgctggcgga atgcatcggc 14220 gctgtggccg cccggcatca gtaccgccgt gagcgccggg ctgcattgcg ccggatccag 14280 gcacagcagc tccagctccc aggcggccac cgccagccgc gtggcgtgcg cgtggcggcg 14340 gtggcgcgca tagacctgcg gcaggccttc ctcgcgcagc atcgccagcg cttcgtgcag 14400 gccataaagc aggttggtgg cgggcgtgta cgggaagtag ccgcgctcgt tggccgccag 14460 catctcgcgc cagtcccagt acgaacgcgg caggcgggcc tgcccggcag cggccagcgc 14520 gcgcgggccg atggcgttga acgacagccc gggcggcaac atcaggcctt tctgcgagcc 14580 cgccacggtt acgtccacgc cccattcgtc gtagcgataa tcgatcgagc cgagcgagga 14640 aatcgtatcg accatcagca aggcggggtg cccggcctgg tcgatggccg cgcgcaccgc 14700 cgcaatgtcg ctggtgacgc cggtggaggt ttcgttgtgc accacgcaca cggccttgat 14760 gcggtgttgc gtgtcctgcg ccagcctggc gccgatggcc tgcgggtcgg ccggatggcg 14820 ccagtcgctt tccaggcaat cgacctccag gcccaggcgg ccggccagcc ggcgccacag 14880 gctggcgaaa tggcccgtct cggccatcag cacggtatcg cccggcgaca gcgtattgac 14940 caatgcggcc tcccaggcgc cggtgccgga cgcggggaag atgagcaccg gcgactcggt 15000 gcgaaacacg tgcttcagtc cggccagcac cgccagcccc aactggccga acgcggggcc 15060 gcgatggtcg atggtgggct ggtcgatggc gcgcagcacg cgatccggca cattggtggg 15120 gccgggaatc tgcaggaagt ggcgaccgga cggatgcggg ttcagggcga acatacgggg 15180 cctcgcattg gattattggt ataccaactc aagccgcgac gcgggcgggc gatacgggcc 15240 cggccatccc gcgccgggct cgtgccactc tagcctattg aattggcgcg atggcctagg 15300 gtattcacgc atgatcgcga cgcgatcgag gcacgtatag tcgtgggcag acccccgaaa 15360 cctggtatac caatgagcct cgaagtcagc ctgccgccct cggccagcgc ctgcgccgaa 15420 ggcgccgcgg gcggcggcac cctgcccgcc accgtggccg cccgcctgcg cgaacgcatc 15480 atccagggtg atttcccgcc cggcgcgcgg ctcaacgaac gcgcgctgtg cgaccagctc 15540 ggcgtatcgc gcacgccgct gcgcgaggcg ctgcgcgcgc tggccgccga gggcctggtg 15600 cgcatcgaac cgaaacgcgg cgcccaagtg gtggccctgt ccgccgccga tatccgcgaa 15660 gccttcgaag tcatcggcgg gctggaggag atgtcgtgcc gcctggcctg cgcgcgcgcc 15720 accgaccagg agatcgccga gatccgcgcg ctgacctacg agatgatggc cagccacgcg 15780 cggcgcgacc tgccgtcgta cttccgcgcc aaccgcgcca tccacgagcg catcggcctg 15840 gccgcgcgca acgccctgct caagcagctg tacgacgcgc agaacgcgcg catccagaac 15900 ctgcgctacg tttccaacga agaccgccac aaatgggacc aggcgatgcg cgagcacatg 15960 gcgatggccg acgccctgca ggcgcgcgac gccgaacggc tggccgacct catgcgcggc 16020 cacctgcggc gcaagtgcga ggcggcgctg cgcagcctgg cggcggcgtc cgggatccgt 16080 tgatcgccgc ggtccccgcg gcgccaggat cctgctcatt caaacagcgt gtcggccgcg 16140 cccaggcgcg gcgccctgga tgggcccgtg cccagcgcct ggcggatgtc ggtctcgaag 16200 gcacaggtgc ggcgccggtc caggtagcgc gccagccgca cctggcggcg gccgcaatgc 16260 agccacagcg attcgtccgc ggccgaccag gcgcggtggc ggatgacgcg cgcgcggccg 16320 cggtcgaaga catggcgcga cacgcgttcg ccgtcgtgga cctcgacgac cagcgtgccg 16380 tcggcccgca gttcgatgtc ctcgccatcg cgcgcatggc gcgcgaaatg ccagccggcc 16440 agcgcgatga acgccagctc gaccacgcac caggcggtga tcgcccacaa tccgtaggcc 16500 gcgcccgcca gccccaccag cacggcgatg gccgccatga tgcccatgcc ggccatgaac 16560 tgggccggcg ccacgctgct gcgccgcagg ctccagcggc acggcgcggc gccctgcgcg 16620 ccggcctgcg gcagaagagg atgggaaagc gtgtcgcgca tggcctgcca gcctgggggt 16680 tccggggcct acttgacctc gggcggcgtc acgaacgtat gatgcggcgc gggcgacggc 16740 acggtccact ccagcccctc ggcgccgtcc cacggcttgg ccgtggccac ctcgcccttg 16800 ccgcggtagc agcgcagcgc cgcccagacg aagatgaact gcgacaggcc gaaccagatc 16860 gcgccgatgg tggccacctg gtggaaggtg gtgaactgcg cggcgtagtc ggcgtagcgg 16920 cgcggcatgc cggccaggcc caggaagtgc atcgggaaga aggtcacgtt gaacgagatc 16980 atggtggacc agaagtgcag cttgcccagc ttctcgtcgt acatgcggcc ggtccatttg 17040 ggcagccagt aatacgcgcc ggcgaacagc gcgaacagcg agcccgccac cagcacgtag 17100 tggaagtgcg ccaccacgta gtaggtgtcg tgcacctgga tgtcgatcgg cgccaccgcc 17160 aggatgaggc cggtgaagcc gccgaccgtg aacacgaaga tgaaacccac cgcgaacagc 17220 atcggcgtct cgaagctgag cgagccgcgc cacatggtgg ccacccaatt gaacaccttc 17280 acgccggtcg ggatcgagat cagcatggtg gcgtacatga agaacagctg gccgaccacc 17340 gggatgcccg tggtgaacat gtggtgcgcc cacaccagga acgacagcac cgcgatcgac 17400 gccgtggcgt acaccatgga tgcatagccg aacagcttct tgcgcgagaa cgccggcacc 17460 acggccgata cgatgccgaa ggccggcagg atcatgatgt agacctcggg atgcccgaag 17520 aaccagaaca cgtgctggta catcaccggg tcgccgcccg ccgccgcgtt gaagaagccg 17580 gtgccgaaat ggcggtcggt cagcagcatg gtgatgcccg ccgccagcac cggcatcacg 17640 gccagcagca ggaacgcggt gatcagccag gtccagcaga acagcggcat gcgcatcagc 17700 gtcatgccgg gcgcgcgcat gttgaggatg gtcaccatga tgttgatcgc gcccatgatg 17760 gacgaggcgc ccatgatgtg caccgcgaaa atggtcaggt ccatgcccgg gcccatctgc 17820 agcgacagcg gcgcgtacag cgtccagccg gcggcggtgg cgccgccgtc gacccagaac 17880 gaactgagca ggagcaccga agccaccggc agcagccaga agctgaagtt gttcatgcgg 17940 gcgaacgcca tgtcggaggc gccgatctgc aaggggatca tccagttggc gaagcccacg 18000 aacgccggca tgatggcccc gaagatcatg atcaggccgt gcatggtggt gaactggttg 18060 aacagctcgg ggcggaagaa ctgcaggccc ggctcgaaca gctcggtacg cacggccagc 18120 gccagcacgc cgcccaccat gagcatcacc agcgagaaga tcaggtacat cgtcccgatg 18180 tccttgtggt tggtcgcgaa caaccatcgt cgccacccgc tgggcgcggc gtgatggtcg 18240 gcatggccgg ccgaaggact gtgatcgtgg acaatggtac tcatgtcgcg cctccgggaa 18300 catggcggcg ccaccggccg ggcctatgct gccgagcccg ccgccagggt ggcggccggg 18360 agccggatcg gctccagcgc tcagttgtac gccttatggc gccgctgcgc caccgcaagc 18420 acaccgccag catggtcttt gatgcggccc cataaggcat gccgcgcgca ccgcgcggcc 18480 gcgccgcatc attgacgccg tcaatatatc cataccaact atccattagt cgtatctgcg 18540 ccggctacct accattttgt caggcccgcc cggaccgcca gcgccaagcg cgcgcgcggc 18600 cggaccaccc ccctgcacac cggcgggccg gcacaaagga gacaacgaga tgaagaagaa 18660 ggtatgccaa gcggccggca tcctcgcgct ggcctgcgcc acggcggcgg cgacggcggc 18720 ctggcccgac aagcccgtgc aagtcgtggt gccgtacaac ccgggcggcg gcgtcgatac 18780 gttcacgcgc ccggtggccg ccaagctggg agaggaactg ggccagacgg tggtggtgga 18840 caaccgcccg ggcgccggcg gcaccatcgg cgtgcaacgc gccgccaccg cgccgcccga 18900 cggctatcac ctgctggccg gcggcgtgca ccagatgatg gccgagggcc tctacccgaa 18960 ccgcggctac gacatggacc gcgatttcgt gccggtggcg ctggtggcca aagtgcccaa 19020 cgtgctggtg gtcaccaaca aggcgccgtt tcgcaacgtc gaggaactga tcgcatatgc 19080 caggaagaac cccggcaagc tgaactattg ctcgtcgggc agcggcaccg cgcaacacat 19140 cgtggccgcc accttcagcc agctggccgg cgtttccatg acgcacattc cgtaccgcgg 19200 caccgcgccc gccatgcagg acctgatcgg cggccagtgc gacctgatgt tcgacgggct 19260 gggcacctcc gcgccacagg tgaggaccag caacatcagg ctgctggccg tcacgtccaa 19320 cgcccgcagc ccggcctttc ccgatgcgcc cacgctcaag gaggccggag gaccggcgat |