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EBI DbfetchID BX640434; SV 1; linear; genomic DNA; STD; PRO; 344805 BP. XX AC BX640434; XX DT 09-AUG-2003 (Rel. 76, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Bordetella parapertussis strain 12822, complete genome; segment 12/14 XX KW complete genome. XX OS Bordetella parapertussis OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. XX RN [2] RP 1-344805 RA Sebaihia M.; RT ; RL Submitted (06-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: RL ms5@sanger.ac.uk XX RN [3] RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., RA Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., RA Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., RA Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., RA Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., RA Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., RA Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., RA Barrell B.G., Maskell D.J.; RT "Comparative analysis of the genome sequences of Bordetella pertussis, RT Bordetella parapertussis and Bordetella bronchiseptica"; RL Nat. Genet. 35(1):0-0(2003). XX DR EMBL-CON; BX470249. DR RFAM; RF01118; PK-G12rRNA. DR SILVA-LSU; BX640434. DR SILVA-SSU; BX640434. XX FH Key Location/Qualifiers FH FT source 1..344805 FT /organism="Bordetella parapertussis" FT /strain="12822" FT /mol_type="genomic DNA" FT /db_xref="taxon:519" FT CDS complement(93..4487) FT /transl_table=11 FT /gene="dnt" FT /locus_tag="BPP3543" FT /product="dermonecrotic toxin" FT /note="ortholog of Bordetella pertussis (BX470248) BP3439" FT /db_xref="InterPro:IPR008430" FT /db_xref="UniProtKB/TrEMBL:Q7W4W3" FT /protein_id="CAE38827.1" FT /translation="MDKDESALRQLVDMALVGYDGVVEELLALPSEESGDLAGGRAKRE FT KAEFALFSEAPNGDEPIGQDARTWFYYPKYRPVAVSNLKKMQVAIRARLEPESLILQWL FT IGLDVYLGVLIAALSRTAISDLVFEYVKARYEIYYLLNRVPHPLAAAYLKRRRQRPVDR FT SGRLGSVFEHPLWFAYDELAGTVDLDADIYEQALAESIERRMDGEPDDGSLDTAEHDVW FT RLCRDGINRGEQAIFQASGPYGVVADAGYMRTVADLAYADALADCLHAQLRIRAQGSVD FT SPGDEMPRKLDAWEIAKFHLAATQQARVDLLEAAFALDYAALRDVRVYGDYRNALALRF FT IKREALRLLGARRGNASTMPAVAAGEYDEIVASGAANDAAYVSMAAALIAGVLCDLESA FT QRTLPVVLARFRPLGVLARFRRLEQETAGMLLGDQEPEPRGFISFTDFRDSDAFASYAE FT YAAQFNDYIDQYSILEAQRLARILALGSRMTVDQWCLPLQKVRHYKVLTSQPGLIARGI FT ENHNRGIEYCLGRPPLTDLPGLFTMFQLHDSSWLLVSNINGELWSDVLANAEVMQNPTL FT AALAEPQGRFRTGRRTGGWFLGGPATEGPSLRDNYLLKLRRSNPGLDVKKCWYFGYRQE FT YRLPAGALGVPLFAVSVALRHSLDDLAAHAKSALYKPSEWQKFAFWIVPFYREIFFSTQ FT DRSYRVDVGSIVFDSISLLASVFSIGGKLGSFTCTQYGNLRNFVVRQRIAGLSGQRLWR FT SVLKELPALIGASGLRLSRSLLVDLYEIFEPVPIRRLVAGFVSATTVGGRNQAFLRQAF FT SAASSSAGRTGGQLASEWRMAGVDATGLVESTSGGRFEGIYTRGLGPLSERTEHFIVES FT GNAYRVIWDAYTHGWRVVNGRLPPRLTYTVPVRLNGQGHWETHLDVPGRGGAPEIFGRI FT RTRNLVALAAEQAAPMRRLLNQARRVALRHIDTCRSRLASPRAESDMDAAIRIFFGEPD FT AGLRQRIGRRLQEVRAYIGDLSPVNDVLYRAGYDLDDVATLFNAVDRNTSLGRQARMEL FT YLDAIVDLHARLGYENARFVDLMAFHLLSLGHAATASEVVEAVSPRLLGNVFDISNVAQ FT LERGIGNPASTGLFVMLGAYSESSPAIFQSFVNDIFPAWRQASGGGPLVWNFGPAAISP FT TRLDYANTDIGLLNHGDISPLRARPPLGGRRDIDLPPGLDISFVRYDRPVRMSAPRALD FT ASVFRPVDGPVHGYIQSWTGAEIEYAYGAPAAARKVMLTDNVRIISIENGDEGAIGVRV FT RLDTVPVATPLILTGGSLSGCTTMVGVKEGYLAFYHTGKSTELGDWATAREGVQALYQA FT HLAMGYAPISIPAPMRNDDLVSIAATYDRAVIAYLGKDVPGGGSTRITRHDAGAGSVVS FT FDYNAAVQASAVPRLGQVYVLISNDGQGARAVLLAEDLAWAGSGSALDVLNERLVTLFP FT APV" FT misc_feature complement(516..539) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(4688..5536) FT /transl_table=11 FT /locus_tag="BPP3544" FT /product="IclR family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP3438" FT /db_xref="GOA:Q7W4W2" FT /db_xref="InterPro:IPR005471" FT /db_xref="UniProtKB/TrEMBL:Q7W4W2" FT /protein_id="CAE38828.1" FT /translation="MSRIPNATARGPGSHSDDGAGQHPIAIQVIDRAMRLLDALAAQPE FT PVTLKELSATTGLHASTAHRILNDLVVGRYVERVDNGLYQLGMRLLELGSLVKGRLNVR FT EAAIGAMRSLHKQTGQTINLSVQQGDEIVYIDRAWSERSGMQVVRAIGGRAPLHLTSTG FT KLFLSTYDTRLVRAYALRTGLAGHTRNSLTELDRLERELALVRRHGYARDNEELELGVR FT CIAAGIYDDTGKLVAGLSISAPAERLQDEWIRLLVDAAASISEALGYEPGVNGIHAPAA FT A" FT misc_feature complement(4739..5287) FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator, score 2e-51" FT misc_feature complement(4847..4912) FT /note="PS01051 Bacterial regulatory proteins, iclR family FT signature." FT CDS complement(5695..6507) FT /transl_table=11 FT /locus_tag="BPP3545" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3437" FT /db_xref="GOA:Q7W4W1" FT /db_xref="InterPro:IPR001453" FT /db_xref="UniProtKB/TrEMBL:Q7W4W1" FT /protein_id="CAE38829.1" FT /translation="MAAESARRIGLIIVGDEILSGRRQDKHFSKVVELLGARGLKLSWA FT ELLPDDRATLAAVLRRSFASGDIVFSCGGIGGTPDDHTRQAAAEALDLPLALHPEAEQA FT IALRAAEMAAKGQGTADMGTPENQQRLQMGMFPRGCEIVPNPYNRIPGFFVRDHTFVPG FT FPVMAWPMLEWTLDTRYRALHHQVRHAEHSFLVFDMPESRITPAMVEIEQRWPGVRAFS FT LPSVGETGGPSHIDLGVKGEPEAAAQALAFLRAEVVRLGGKLAPPAQN" FT CDS complement(6562..7362) FT /transl_table=11 FT /locus_tag="BPP3546" FT /product="putative inner membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3393" FT /db_xref="UniProtKB/TrEMBL:Q7W4W0" FT /protein_id="CAE38830.1" FT /translation="MTVPRPESIIPPAGNAATGAAGIARAFKRALVSQCHPNMLFAVLL FT PFLIALLGAILLLWLFWTPLNEWLRFEASQWQAINQVDDWMVAAGLFSLKIYLVPVIAA FT AILLPISGILGLAIAAVFVMPLVLRHVGGREYAGLARQGRNATAVSVWNALWVSLAFGA FT GWLLTLPFWLIPPMAVILSVFWWAFAFTRMLRLDAIVEHASPAERAILLKRHNSGFWLI FT GLVCSLLNLLPPAWIILPVFSGLVYAHYGLDALQRLRQERTIDV" FT misc_feature complement(join(6643..6708,6793..6849,6862..6918, FT 6982..7074,7177..7242)) FT /note="5 probable transmembrane helices predicted for FT BPP3546 by TMHMM2.0 at aa 40-62, 96-127, 148-167, 171-190 FT and 218-240" FT CDS 7361..7807 FT /transl_table=11 FT /locus_tag="BPP3547" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3394" FT /db_xref="GOA:Q7W4V9" FT /db_xref="InterPro:IPR017936" FT /db_xref="UniProtKB/TrEMBL:Q7W4V9" FT /protein_id="CAE38831.1" FT /translation="MARPENGYAGYDSQTRCDLPTMPLHVPGSDIPTLRAALARSDAWL FT VACFCAAWCDTCQQYRPKLLELARARPGHTFAWIDIEDHPDLLGEEDVENFPTLLVQAH FT GKVLFYGPMLPHIGHLERLLDSLDPQGRPVATGLPDVARLLAAA" FT CDS complement(7819..9252) FT /transl_table=11 FT /locus_tag="BPP3548" FT /product="putative ATP-dependent RNA helicase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3395" FT /db_xref="GOA:Q7W4V8" FT /db_xref="HSSP:1HV8" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:Q7W4V8" FT /protein_id="CAE38832.1" FT /translation="MTESTSSDAPVTDAPTRTFADFGLHPLLLKSIADTGYTNPTPIQA FT QAIPVVVEGRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRE FT LADQVYESVKRYSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQKNV FT NLSQVGILVLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNH FT PVEIEVAARNATADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLAR FT QLERDGVKAESIHGDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDL FT PYNAEDYVHRIGRTGRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPADLVA FT RSHGRDRDAPRERGADRHRGERRTSGAAAPRQPVDELFYKPYEPANGQPASPETPKQEG FT RSNAPKRQLAVLLGGSRKG" FT misc_feature complement(8179..8394) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 7.3e-34" FT misc_feature complement(8530..9165) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase, FT score 1.1e-83" FT misc_feature complement(8713..8739) FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT misc_feature complement(9049..9072) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(9459..9788) FT /transl_table=11 FT /locus_tag="BPP3549" FT /product="putative conserved inner membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3396" FT /db_xref="InterPro:IPR008407" FT /db_xref="UniProtKB/TrEMBL:Q7W4V7" FT /protein_id="CAE38833.1" FT /translation="MSDRDLYVYGAILLLTLCSVLTRAGFMLFGDYIPLPDGVRRALRY FT APAAALTAIVVPDLLPWKAGLGPAFDYKLVAGVLAIMAFLRTRSAVLVIVVGMVALWGL FT RWLAG" FT misc_feature complement(join(9477..9542,9702..9767)) FT /note="2 probable transmembrane helices predicted for FT BPP3549 by TMHMM2.0 at aa 7-29 and 82-104" FT CDS complement(9791..10393) FT /transl_table=11 FT /locus_tag="BPP3550" FT /product="putative inner membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3397" FT /db_xref="InterPro:IPR011606" FT /db_xref="UniProtKB/TrEMBL:Q7W4V6" FT /protein_id="CAE38834.1" FT /translation="MRAITPALIATGTWGMVTGVVMVKSGLTESMALAMTLLMYAGSAQ FT LTSLPLIATGAPLWLIFAAGFVVNPRFLIFGAALHPYFRHMSWPRRLGLGYFTTDMGFV FT LFMPRFGDAAERGTREQLWFFLGTVAPGWMVWQVTSIVGIYLGSLVPEAWSLDFAAVLA FT LLAITVPLANSKPMLVSMLAAGIVAGIWAERFFKGRT" FT misc_feature complement(join(9806..9862,9878..9934,9956..10021, FT 10067..10117,10157..10222,10268..10333)) FT /note="6 probable transmembrane helices predicted for FT BPP3550 by TMHMM2.0 at aa 20-42, 57-79, 92-109, 124-146, FT 153-172 and 177-196" FT misc_feature complement(9893..10381) FT /note="HMMPfam hit to PF03591, AzlC protein, score 6.3e-21" FT misc_feature complement(10325..10393) FT /note="Signal peptide predicted for BPP3550 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.653) with cleavage site FT probability 0.234 between residues 23 and 24" FT CDS 10657..11577 FT /transl_table=11 FT /gene="ilvE" FT /locus_tag="BPP3551" FT /product="branched-chain amino acid aminotransferase" FT /EC_number="2.6.1.42" FT /note="ortholog of Bordetella pertussis (BX470248) BP3398" FT /db_xref="GOA:Q7W4V5" FT /db_xref="HSSP:1IYE" FT /db_xref="InterPro:IPR005785" FT /db_xref="UniProtKB/TrEMBL:Q7W4V5" FT /protein_id="CAE38835.1" FT /translation="MSMSDRDGFIWYDGKLVPWREATTHVLTHSLHYGLSVFEGVRAYE FT TAAGTAIFRLQDHTNRLFNSAHIYQIPLPYDRDTLNEAQREVVRANGLASCYLRPLAFY FT GSEKMGVSPKGAQVHVAIAAWPWGAYLGETALAQGIRVKVSSFARQHVNVTMPRAKVAT FT TYANSIIANAEALQDGYDEALLLDTEGFVAEGAGENIFIVKDGVLCEPEIASALTGITR FT STIHALAADLGLRVVTKRLTRDDVYIADEAFFTGTAAEVTPIREVDNRQIGAGRRGPVT FT EKLQQAFFDLVNGRNPKYQHWLTPV" FT misc_feature 10693..11523 FT /note="HMMPfam hit to PF01063, Aminotransferase class IV, FT score 1.3e-91" FT CDS 11624..11836 FT /transl_table=11 FT /locus_tag="BPP3552" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3399" FT /db_xref="UniProtKB/TrEMBL:Q7W4V4" FT /protein_id="CAE38836.1" FT /translation="MTAAAQAAVPAHDAIEVGAEDLPVYCAGPKAPLWSMHPRVFLDVT FT HTGQASCPYCGAAYRLKPGTVVHGH" FT CDS 11859..12281 FT /transl_table=11 FT /locus_tag="BPP3553" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3400" FT /db_xref="UniProtKB/TrEMBL:Q7W4V3" FT /protein_id="CAE38837.1" FT /translation="MFATPDEAEHAFYEALEHADLDRLMQVWSDDEEIACIHPGGLRIV FT GHTAVHESWQQVLANGPLHLRPLRPLVMQSMMCAVHVLVEQVTVMTREGAQFANCYATN FT VYHKGPAGWRMVLHHASQAPAEAGVLDLHDFPDRLH" FT CDS 12298..13398 FT /transl_table=11 FT /locus_tag="BPP3554" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3401" FT /db_xref="GOA:Q7W4V2" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7W4V2" FT /protein_id="CAE38838.1" FT /translation="MAASRIDLTPCPVPPWLPDRHSQTVYAAVLAQYHRIAFVRERVDT FT PDTDFVDFDWTGPGLFPHKTAEGAAPAGPAPQGNGRIAAARWITATDWASLPQTADTPA FT LILFHGLEGGSTSRYAQSIAHYFRARGWIVVIAHFRGCSGVPNRLARAYYSGDSAEVGF FT MLDTVRARIPHARWHAVGVSLGGNALLKYLGEHHDEASWLAAAAGVSVPLDLVAGGKAL FT CTGFIARRIYTAYFLKTMRRKVLEKAKRFPGAIDVIRIAHARDLRDFDDAYTARMHGYR FT NALDYWTRASSKPWLAHIKTPTLVLNARNDPFLPESALPIPAECSDSVLLHQPAEGGHA FT GFPTGPFPAHLNWLPQRLGRFFEMGS" FT CDS complement(13495..15012) FT /transl_table=11 FT /locus_tag="BPP3555" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3402" FT /db_xref="GOA:Q7W4V1" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:Q7W4V1" FT /protein_id="CAE38839.1" FT /translation="MNRWNLTFSPSLGRRALAAALSLALGLPVAPAVGQPSGLPSMGAA FT SASELSPMLERQLGDAIMAQGRRDPTYINDPELRQYLTTMGRKLASFAPGAAPHVEMFG FT VRDPEINAFAMPGGYIGVNTGLIVSSASESELAAVLAHEIGHVAQRHIARGMTQQNQNS FT MVMLASLAGALLAALAGGGGNLAMGVAAFGQAAAINRQLGFSRDAEREADRTGLQMLAK FT AGYDPDGMAQMFSRLMNASRLNEGMGGGAWASTHPLSIDRMSDVQNRIRGLPGSRHVDS FT DDFWFIRAKMRVAQGRDALSLRTAQQQLQDESRALSGVRQAAAFYGLALYAFQRNDLAQ FT ARAFLEQAGAGGRSSPQMARLAIDVAVAAKDNDQALALAQAAVKRWPDRKALGIAYAQA FT LQAAGRHADAQAYLRERARQWGGDEPSLYQLLAQSEERTGHPVDARRNMARYYDLTGAY FT ASAESQLQQARGLSNDFYEQSQIDVSIREIKQKLADERQLLERFKSG" FT misc_feature complement(14404..14478) FT /note="PS00583 pfkB family of carbohydrate kinases FT signature 1." FT misc_feature complement(14911..15012) FT /note="Signal peptide predicted for BPP3555 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.802 between residues 34 and 35" FT CDS 15088..15927 FT /transl_table=11 FT /locus_tag="BPP3556" FT /product="putative UTP--glucose-1-phosphate FT uridylyltransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3403" FT /db_xref="GOA:Q7W4V0" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/TrEMBL:Q7W4V0" FT /protein_id="CAE38840.1" FT /translation="MQVVRKAVFPVAGMGTRFLPATKAMPKEMLPVVDKPLIQYAVEEA FT VAAGITDLIFVTGRNKRAIEDHFDAAPELETDLEAKGKHELLALVRDILPAHVNCLYIR FT QSAPLGLGHAVLTAAPAVGNEPFAVLLADDLIDADTPVLKQLIDVAVARQGSVLGVQEV FT PREDTRKYGIVASQPVDARTERVTHIVEKPAPEQAPTTLAVVGRYVLEAAIFDHLRATT FT VGAGNEIQLTDGIAALLRERDVYAHRYDGKRYDCGSKAGMFQATVALGRKYHGLIPE" FT misc_feature 15103..15903 FT /note="HMMPfam hit to PF00483, Nucleotidyl transferase, FT score 8.4e-19" FT CDS complement(15949..16830) FT /transl_table=11 FT /locus_tag="BPP3557" FT /product="putative inner membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3404" FT /db_xref="InterPro:IPR019108" FT /db_xref="UniProtKB/TrEMBL:Q7W4U9" FT /protein_id="CAE38841.1" FT /translation="MTRMDWLEWLIPWEFSPTLVAAFVVAIVLFVRGQHVHHVTAARQW FT LFWSGMVLLYLSMHTRLDYYAERMFFIHRAQHLVLHHLGPLLVMAAFPGSAMRAGLPMA FT WRVRLRDFLRTGTGRALAAVLTHKVFVPTLFVFLVLVWLLPSVQFYSMLDWRLYRLMNW FT SVVISGFMYWNLILDRRPSPPAAMTPGGRVLSPALTMAPQMVAGAVIAFTERDLYPLFE FT LCGRAIAMSAQTDQTIGGLTMWIPAALVEVVGLLVALGTLMRLSGKGRLRPQDRAARAR FT QRAAGSPTSPAA" FT misc_feature complement(join(16045..16110,16195..16260,16300..16356, FT 16402..16467,16528..16593,16639..16695,16735..16800)) FT /note="7 probable transmembrane helices predicted for FT BPP3557 by TMHMM2.0 at aa 10-32, 45-64, 79-101, 121-143, FT 158-177, 190-212 and 240-262" FT CDS complement(16912..18006) FT /transl_table=11 FT /gene="ompQ" FT /locus_tag="BPP3558" FT /product="outer membrane porin protein OmpQ" FT /note="ortholog of Bordetella pertussis (BX470248) BP3405" FT /db_xref="GOA:Q7W4U8" FT /db_xref="InterPro:IPR002299" FT /db_xref="UniProtKB/TrEMBL:Q7W4U8" FT /protein_id="CAE38842.1" FT /translation="MRRLLVVAAMAAGSSSVFWSVAPARAANQLELYGVVDVGLATTRV FT SGLGTRQQVLGGGQTDNLWGLRGTEELDGGWRASFGLESGFDAANGTRNDDARLFDYGT FT WVGLGHAGVGELSLGRQQSIGLQYGGQLEIASWRDMGMGALFKASDNYRVNNLVNYLSP FT EFSGWQWGVGYAFDVESGDTGRFDRSPAFSTGLKYEDGPLLAAFTWDKLNLHDTSATGG FT RSPQALQAGFTYDFEALKMALAWSRQRNGFVGLNGGGQIGLGPEPFAHGGAINAWLLGL FT EVPVHGNGAWLVQGSMARPDWHWANGQQASKAYVVTLGYRQDLSARTSLYAYGGYMKGY FT DPEDPFASDVGRATRFGVGMTQRF" FT misc_feature complement(16918..17934) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00267, Gram-negative porin, score FT 0.024" FT misc_feature complement(17929..18006) FT /note="Signal peptide predicted for BPP3558 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.963 between residues 26 and 27" FT CDS complement(18264..18623) FT /transl_table=11 FT /locus_tag="BPP3559" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3409" FT /db_xref="UniProtKB/TrEMBL:Q7W4U7" FT /protein_id="CAE38843.1" FT /translation="MRFFDLFLRRAGVDRTHALSQRRGTSRLTFVCPRDALGAVRKQIC FT LDFSAAGLSVAQFQVDSGRDAELASACITVSCPPELRAELMSQARRLSANPAVQQLRFG FT AAEPASARACAEAVA" FT CDS complement(join(19005..19583,19585..20043)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP3560" FT /product="putative inner membrane protein (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP3410" FT /db_xref="PSEUDO:CAE38844.1" FT misc_feature complement(join(19012..19077,19105..19170,19183..19248, FT 19384..19449,19588..19644,19732..19797,19843..19908, FT 19948..20013)) FT /note="8 probable transmembrane helices predicted for FT BPP3560 by TMHMM2.0 at aa 10-32, 45-67, 82-104, 133-152, FT 198-220, 265-287, 291-313 and 322-344" FT misc_feature complement(join(19515..19583,19585..19977)) FT /note="HMMPfam hit to PF01699, Sodium/calcium exchanger FT protein, score 4.5e-06" FT misc_feature complement(19960..20043) FT /note="Signal peptide predicted for BPP3560 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.790) with cleavage site FT probability 0.613 between residues 28 and 29" FT CDS 20330..21670 FT /transl_table=11 FT /locus_tag="BPP3561" FT /product="putative Xaa-Pro aminopeptidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3411" FT /db_xref="GOA:Q7W4U6" FT /db_xref="HSSP:1A16" FT /db_xref="InterPro:IPR007865" FT /db_xref="UniProtKB/TrEMBL:Q7W4U6" FT /protein_id="CAE38845.1" FT /translation="MSLPPDDIAPFAARRRRLMDHMRAAGGGIAILPTAPQALRNRDAE FT YPYRHDSDFFYLTGFTEPEAWLVLVAGATDRALLFCRDKHPEHEIWEGFRFGPEAAAAR FT FGFDDAHGIGTLDELVPALLLDQPALWTPVAASAALDERARGWLAAARAQGRSGRLAPA FT VLRDPAPVLAGMRLVKDAAEIAAMRRAAKISAAAHQRAMRAARPGMREYELEAELLYEF FT RRQGAQSVAYNSIVAAGANACVLHYPAGDAELRDGDLVLIDAGCEYDSYAADITRTFPV FT NGRFSGPQRALYDLVAHAQEAAVAATGPGRSWNDGREAAVRVLAQGMLDEKLLTGSLDG FT VLESGAYSRFYMHRTGHWLGLDVHDVGDYRGAGPAGAPRPWRMLEPGMMLTVEPGIYVR FT AADDVPARFWDIGIRIEDDALVTEEGCELITRGVPVQAREIEALMRE" FT misc_feature 20858..21646 FT /note="HMMPfam hit to PF00557, metallopeptidase family M24, FT score 1e-80" FT misc_feature 21386..21424 FT /note="PS00491 Aminopeptidase P and proline dipeptidase FT signature." FT CDS complement(21680..22132) FT /transl_table=11 FT /locus_tag="BPP3562" FT /product="putative inner membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3412" FT /db_xref="UniProtKB/TrEMBL:Q7W4U5" FT /protein_id="CAE38846.1" FT /translation="MTQAHLSVPGAARRPRSKIALGLLACALGWIGAHWWYLGRRRAWM FT VTLAAILCLAATQWFPVWYDNPAFFLLFIPMIDGFIEGVVFSLMPDEKFDRLYNPGLGQ FT VSRTGWGPVLVAIFGVLVGAIASMFAVAMVVVYTWVAMGWLDGYVF" FT misc_feature complement(join(21710..21802,21866..21931,21947..22003, FT 22019..22072)) FT /note="4 probable transmembrane helices predicted for FT BPP3562 by TMHMM2.0 at aa 20-38, 43-62, 67-89 and 110-141" FT CDS 22229..23410 FT /transl_table=11 FT /locus_tag="BPP3563" FT /product="putative monooxygenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3413" FT /db_xref="GOA:Q7W4U4" FT /db_xref="InterPro:IPR018168" FT /db_xref="UniProtKB/TrEMBL:Q7W4U4" FT /protein_id="CAE38847.1" FT /translation="MRCMTLPAYDIAILGAGPVGRVLALLLARLTPQPQRIALLQGGAG FT LPPTPAGTLGPAADPRVLALNHGSRVLLESLRAWPAHAAEIRHIHVSQRGRLGRTVIDR FT EDFDVPQLGNVVAYAALHAQLEQAVQDCGVTVLSGPPARVDGQDGEGLTVRQGDAALHC FT RLAVQCDGAGGSDVRRDYAQHAVLTSAHATLPRSGWAWERFTNEGPLAMLPHPQTPEAY FT SVVWCCAPPRAQRLAGLDDEAFSRELTEAFGTRLGRLRSAAPRHVFPLELKARHAQAHG FT RLATIGNAAQTLHPVAGQGLNLGLRDAAQLAHALPDWLAAPQADPSPLLAAFARARLAD FT RWVTAGLTDLMPRIFATGLAPVEHACGLALLGLDIAAPLRAPLARHLLQGLRV" FT misc_feature 22712..23275 FT /note="HMMPfam hit to PF01360, Monooxygenase, score FT 6.4e-08" FT misc_feature 23108..23149 FT /note="PS01304 ubiH/COQ6 monooxygenase family signature." FT CDS 23470..24501 FT /transl_table=11 FT /locus_tag="BPP3564" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3414" FT /db_xref="GOA:Q7W4U3" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q7W4U3" FT /protein_id="CAE38848.1" FT /translation="MRMRIGPWSLPNNVLVAPMAGVTDRPYRQLCKRLGAGYAVSEMAA FT SNPRLWDSVKTSRRLNHEGEIDPISVQIAGADPTMMAEAAAFNVAKGARIIDINMGCPV FT KKVCNVASGSALLRHEDLIVRILEAVVAACAPLGVPVTLKTRTGWDREHRNALRVGRLA FT EQAGIAALTLHGRTRADLYTGQAEYDTIRAVKAELKIPVIANGDIDSPEKARQVLDYTG FT ADAVMIGRAAQGRPWIFREIDHYLRTGARLAPPSYGEMRDLLLEHLDDHYRFYGEHTGV FT RTARKHIGWYLDDLPGAAAFCARMNQIDNTREQWRAVADWFDTILREGRDQQAFVAQPL FT LAA" FT misc_feature 23512..24447 FT /note="HMMPfam hit to PF01207, Uncharacterized protein FT family UPF0034, score 3.5e-123" FT misc_feature 23755..23811 FT /note="PS01136 Uncharacterized protein family UPF0034 FT signature." FT CDS 24542..24781 FT /transl_table=11 FT /gene="fis" FT /locus_tag="BPP3565" FT /product="DNA-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3415" FT /db_xref="GOA:Q7W4U2" FT /db_xref="HSSP:1ETY" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/TrEMBL:Q7W4U2" FT /protein_id="CAE38849.1" FT /translation="MSKKDVLEECVRASLERYFEDLGDSEPHDMWDMVMRCVERPVLEV FT ALERSGGNQSRASEMLGITRNTLRKKLLAHNIQP" FT misc_feature 24644..24766 FT /note="HMMPfam hit to PF02954, Bacterial regulatory FT protein, Fis family, score 1.9e-13" FT CDS 24851..26440 FT /transl_table=11 FT /gene="purH" FT /locus_tag="BPP3566" FT /product="bifunctional purine biosynthesis protein" FT /EC_number="2.1.2.3" FT /EC_number="3.5.4.10" FT /note="ortholog of Bordetella pertussis (BX470248) BP3416" FT /db_xref="GOA:Q7W4U1" FT /db_xref="HSSP:1PKX" FT /db_xref="InterPro:IPR011607" FT /db_xref="UniProtKB/TrEMBL:Q7W4U1" FT /protein_id="CAE38850.1" FT /translation="MKIETALLSVSDKTGIVEFARALTARGVRLLSTGGTARLLSEAGL FT AVTEVAQHTGSPEILEGRVKTLHPKIHGGLLARRDSAEHMDTIAACGIDRIDMLVVNLY FT PFRETVAKPDCTFADAIENIDIGGPAMLRAAAKNHGTDAGGVTVVIDPADYSRVLAQMD FT QGGSTSYALRLELAAKVYSHTAAYDGAIAAYLTSLAEAAPAQDAVPARNEWPGTLTIQV FT RQEQALRYGENPHQTAAFYVDAQRPAGLLGNYRQLQGKELSYNNIADADAAWECVRSFD FT STACVIVKHANPCGVAIGDGTLHAYQQAFKTDPTSAFGGIIAFNRPVDAATAEAVSGQF FT LEVLLAPAYDGAALAILAAKKNVRVLEVPAGPGQNAFDIKRVGCGWLVQSPDAYNVPRD FT ALKVVSKRQPTEQEMNDLAFAWKVAKYVKSNAIVFVGGGMTLGVGAGQMSRIDSARIAS FT IKAENAGLTLRGSAVASDAFFPFRDGLDVVVAAGTTCVIQPGGSVRDDEVIAAADEHGI FT AMVLTGTRHFRH" FT misc_feature 24866..25240 FT /note="HMMPfam hit to PF02142, MGS-like domain, score FT 1.4e-52" FT misc_feature 25118..25147 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature 25253..26233 FT /note="HMMPfam hit to PF01808, AICARFT/IMPCHase bienzyme, FT score 4.8e-151" FT CDS 26440..26988 FT /transl_table=11 FT /gene="ruvC" FT /locus_tag="BPP3567" FT /product="crossover junction endodeoxyribonuclease" FT /EC_number="3.1.22.4" FT /note="ortholog of Bordetella pertussis (BX470248) BP3417" FT /db_xref="GOA:Q7W4U0" FT /db_xref="InterPro:IPR002176" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4U0" FT /protein_id="CAE38851.1" FT /translation="MRVLGIDPGLRRTGFGVIDAEGMRLRYVASGTIVVPPALSLPERL FT KVILDNLREVARETRPDVAALEIVFLNTNPASTLLLGQARGAALCALADSALDVHEYTA FT LQIKKAVVGTGRAAKEQVQMMVQRLLSLDGTPAPDSADALACAICHAHVGPLHDRLDRL FT GTAAQLGSRPRLRNGRLVG" FT misc_feature 26446..26889 FT /note="HMMPfam hit to PF02075, Crossover junction FT endodeoxyribonuclease RuvC, score 4e-69" FT misc_feature 26875..26892 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS 27069..27641 FT /transl_table=11 FT /gene="ruvA" FT /locus_tag="BPP3568" FT /product="holliday junction DNA helicase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3418" FT /db_xref="GOA:Q7W4T9" FT /db_xref="InterPro:IPR000085" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4T9" FT /protein_id="CAE38852.1" FT /translation="MIGRITGTLIEKSPPVVCVDVNGVGYEIDVPMSTLYALPETGARV FT TLFTHLVVREDAQLLYGFGSSAERSTFRELIKVTGIGARTALAVLSGLSVAELSQAITL FT QETGRLTRVPGIGKKTAERLLLEMRGKLGADIGATPHAAGGHQSDILNALLALGYSDKE FT SQAALKKLPEGVDVSEGIRLALKALVR" FT misc_feature 27069..27257 FT /note="HMMPfam hit to PF01330, RuvA N terminal domain, FT score 1.1e-29" FT misc_feature 27261..27479 FT /note="HMMPfam hit to PF02904, RuvA central domain II, FT score 1.8e-31" FT CDS complement(27660..28571) FT /transl_table=11 FT /locus_tag="BPP3569" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3419" FT /db_xref="GOA:Q7W4T8" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W4T8" FT /protein_id="CAE38853.1" FT /translation="MRILVIGGTGFIGRHLVARLAAQEHKVLVPTRRYNKGRDLQVLPT FT VTLIEADVHDDAELDRLMHRCDAVVNLVGVLHGGRGRPYGAGFARAHVLLPERIAQACV FT RNGVARMLHVSALGADSGGPSMYLRSKGDGEAAIQRVFGATGGWTLFRPSVVFGPDDNF FT TRMFARLARLFPVLPLAGARSRMQPVYVGDVADAMMAALANGHTAGKIYELCGPQVYTL FT GEIVRLCALWSGHPRPVCEMPMALGRMQALLFECLPGDPLVSRDNLDSLTRDNVASGAA FT PSGLAAPPAALEAVAPAYLARR" FT CDS complement(28647..29615) FT /transl_table=11 FT /locus_tag="BPP3570" FT /product="putative serine/threonine dehydratase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3420" FT /db_xref="GOA:Q7W4T7" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/TrEMBL:Q7W4T7" FT /protein_id="CAE38854.1" FT /translation="MQPQLPTYADVEQAAATLAGVAHRTPVLTSATADAMAGAQVFFKC FT ENFQRMGAFKFRGGYNAIARLTPEQRRAGVVTFSSGNHAQAIALAARLQGVQATIIMPQ FT DAPAAKRAATEGYGGRIVTYDRYSEDREAIARRLQEETGATLIPPYDHADVIAGQGTAA FT KELFDEVGELDYLFVCLGGGGLLAGSALAARALSPACRVYGVEPAAGNDSQHSLRKGEI FT VTIAAPKSIADGAVTTHLGRLTFAIIQQQVADILTVSDAELVQSMRFFAERMKMVVEPT FT GCLAATAALRKLIPEAAGKRVGVIISGGNVDLPVYARLLAD" FT misc_feature complement(28689..29564) FT /note="HMMPfam hit to PF00291, Pyridoxal-phosphate FT dependent enzyme, score 6.2e-77" FT CDS 29738..30811 FT /transl_table=11 FT /gene="ruvB" FT /locus_tag="BPP3571" FT /product="holliday junction DNA helicase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3421" FT /db_xref="GOA:Q7W4T6" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4T6" FT /protein_id="CAE38855.1" FT /translation="MAIQSDSLSSLPDSPRIVAPQPVSPNEESIERALRPKALEEYVGQ FT QRAREQLEIFIAAARKRGEALDHVLLFGPPGLGKTTLAHIIAHEMGVQLRQTSGPVLER FT PGDLAALLTNLERNDVLFIDEIHRLSPVVEEILYPALEDFQIDILIGEGPAARSVKLDL FT QPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYNTDELARIVTRSASLLNADITADGAHE FT VARRSRGTPRIANRLLRRVRDYAQVKAHGVIDQDAAGRALAMLDVDPQGLDVMDRKLLE FT AIVHKFDGGPVGVDSLAAAIGEERDTIEDVIEPYLIQHGYLQRTPRGRTATLTTWRHLG FT LNPPAAASGGTGELFSK" FT misc_feature 29939..30478 FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA), score 1.3e-32" FT misc_feature 29954..29977 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(30818..32638) FT /transl_table=11 FT /locus_tag="BPP3572" FT /product="ATP-dependent DNA helicase" FT /product="putative ATP-dependent DNA helicase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3422" FT /db_xref="GOA:Q7TTP1" FT /db_xref="HSSP:1OYY" FT /db_xref="InterPro:IPR018982" FT /db_xref="UniProtKB/TrEMBL:Q7TTP1" FT /protein_id="CAE38856.1" FT /translation="MSDPRALGVLARVFGYESFRGDQQAIVDHVIGGGDALVLMPTGGG FT KSLCYQVPALVREGTGIVVSPLIALMQDQVDALTELGVRAAFLNSTQDWRVAREVEQAF FT LAGELDLLYVAPERLLTDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHE FT RWPEVPRIALTATATAATRSEIAQRLALDEARHFVASFDRPNIRYRIVEKNEVRRQLLD FT LIRSEHEGESGVVYGLSRARVEETADFLCANGVNALPYHAGLSPAVRAANQARFLREDG FT IVMVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGLPASAWLAYGLQDVV FT QQRRMIDESPGDDAYRRRLGQQLDAMLGLCETVECRRVCLLAYFGQTITACGNCDVCLE FT PPQAWDGTVAAQKVLSAVYRLWKERGQRYGAGHIIDILRGKSTDRTRQHDHETLSVFGV FT GADLSENAWRGVLRQLLAQGLLAVDHEGFGTLALTEGSRAVLKGEHQLMLRREAEKKPR FT GSRAGARARPDPIDLPAEAKPVFESLRSWRGEVAKSNGVPAYVIFHDATLREIALARPE FT SLDDLSHISGVGARKLEAYGEEILRCVQRP" FT misc_feature complement(30824..31042) FT /note="HMMPfam hit to PF00570, HRDC domain, score 9.4e-16" FT misc_feature complement(30935..31021) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT misc_feature complement(31664..31879) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 1.1e-23" FT misc_feature complement(32006..32614) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase, FT score 2.8e-34" FT CDS complement(32715..34193) FT /transl_table=11 FT /locus_tag="BPP3573" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3221" FT /db_xref="UniProtKB/TrEMBL:Q7W4T5" FT /protein_id="CAE38857.1" FT /translation="MPIYQESLQMPRSGIPTLVRVMLACEREHRGVSRVAVAAVLAGNM FT ALAACAMPDPPDISRAPAGLEAGPETAAIDTTPPETAAPRPAGRAYARAADDVARYGIS FT VLAPASSQPVAPAPVLQERAIPEPCRMLPAETGADASVHAAAPALGHDPAVPLPPAGDG FT ADAPASMPLGCEDLFPDVPPAEPNYSFGLETDDLTGKRSVYLMTGVAQPRRPWFSSASA FT VPTVSYGDRSWVYRPVTGPSLAMGNVVSKAPGWGSTAPIGGVQLSDRLSPGGLLPEGQL FT GYSSVFGRLNNMDPAATSGAVDYGASAGSGMVRYGLTPSLTLEGQMQSAPSLTTRGVGT FT TYAAGELGTFQVGATQSTFDAVNAWRYRFGYNVNLADDAVTLGVATEEVGAGFGDLASF FT QDGGFAHRQMRNTLSAGVPISGWGTLSGTYQASGMGVDSVTERRFGLQHSMLLAPSVKF FT AVGADRDVISGDYEMRANISMPVDAFMRGRWLGF" FT misc_feature complement(34044..34076) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 34324..35025 FT /transl_table=11 FT /gene="ompR" FT /gene_synonym="ompB" FT /gene_synonym="kmt" FT /locus_tag="BPP3574" FT /product="transcriptional regulatory protein OmpR" FT /note="ortholog of Bordetella pertussis (BX470248) BP3222" FT /db_xref="GOA:Q7W4T4" FT /db_xref="HSSP:1B00" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4T4" FT /protein_id="CAE38858.1" FT /translation="MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARI FT TRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYL FT GKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGE FT INLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQ FT TVWGIGYRFSP" FT misc_feature 34339..34698 FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 4.6e-40" FT misc_feature 34786..35007 FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal, score 3.5e-25" FT CDS 35025..36440 FT /transl_table=11 FT /locus_tag="BPP3575" FT /product="putative two-component sensor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3223" FT /db_xref="GOA:Q7W4T3" FT /db_xref="HSSP:1BXD" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q7W4T3" FT /protein_id="CAE38859.1" FT /translation="MKLPRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMED FT VAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQE FT DEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAP FT SPSPDDAPPLREWLVIPLERLDPPVATPLIVSWVGGIGLVLAWFSWHITRPLTRLADAA FT DQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMW FT LRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAW FT QGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPIEVSLRRDADMAVLE FT VSDHGPGIAPERRTEALRPCARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSG FT GLLVRITLPLAAA" FT misc_feature 35025..35111 FT /note="Signal peptide predicted for BPP3575 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.872 between residues 29 and 30" FT misc_feature 35070..35138 FT /note="1 probable transmembrane helix predicted for BPP3575 FT by TMHMM2.0 at aa 16-38" FT misc_feature 35601..35795 FT /note="HMMPfam hit to PF00672, HAMP domain, score 1.4e-09" FT misc_feature 35805..35981 FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 0.0048" FT misc_feature 36105..36431 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90-like ATPase, score 2.2e-28" FT CDS complement(36457..37515) FT /transl_table=11 FT /locus_tag="BPP3576" FT /product="putative cytochrome oxidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3224" FT /db_xref="GOA:Q7W4T2" FT /db_xref="InterPro:IPR003317" FT /db_xref="UniProtKB/TrEMBL:Q7W4T2" FT /protein_id="CAE38860.1" FT /translation="MIATLAASLGLSPDDPSFWMPLVFVGLLLLLMAAGIVLDGFDIGV FT GLLLQLAPSEERGRMMGLLSPWRDANEFWPLLGLGLFVSAFPFAWGVVLGKLFGPLTVM FT ALGMVLRSVSFEFRIRARTEIKPRWIFGFWVGSLLTALGQGMVLGRIATDYQADAGYGW FT FAFFVGLCAMAAYALLGACWLVMRVDGGELQRRAAGWARHSIRWTAAGMVAIAVTLGLA FT NAGIFYKWSNTAHLGVAAMVWALMLLGFVAAEMLLARLPGKADGFSWLPFVLCVMLFVL FT MLCGLAYSFFPYLILDDMTIWDGSGALDSMRLVLAGTVIGVPVVLVFNILAYRSVFGKE FT RRPVPLLPPPGA" FT misc_feature complement(36493..37458) FT /note="HMMPfam hit to PF02322, Cytochrome oxidase subunit FT II, score 6.2e-12" FT misc_feature complement(join(36517..36582,36643..36708,36745..36801, FT 36832..36897,36961..37026,37057..37122,37186..37251, FT 37402..37467)) FT /note="8 probable transmembrane helices predicted for FT BPP3576 by TMHMM2.0 at aa 16-38, 88-110, 131-153, 163-185, FT 206-228, 238-257, 269-291 and 311-333" FT CDS complement(37512..38903) FT /transl_table=11 FT /locus_tag="BPP3577" FT /product="putative transmembrane cytochrome oxidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3225" FT /db_xref="GOA:Q7W4T1" FT /db_xref="InterPro:IPR002585" FT /db_xref="UniProtKB/TrEMBL:Q7W4T1" FT /protein_id="CAE38861.1" FT /translation="MQAVPHMPETGSKLPPIMNIPPLLLARAQFTASLGFLALFLAISL FT ALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACTVPVLIQLGSLWSGLMD FT KIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVL FT ALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQ FT ALRRPLDDGERHAFRAGLAVALLASLLLGPLAAGMGEVTARLQPAKAAAAAGFWHSGAE FT PELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLR FT LALGLGLLMLAASCATLALTCRRGFDPAALPRWWLRVLSLLMFAGALGVVATWCYDLAG FT MQPYAVNRAVTQSEVLGPVTTPALLYSLAGHVALYAVLLAAFVGMLFHAARYGVVPVRK FT TGGSS" FT misc_feature complement(37527..38831) FT /note="HMMPfam hit to PF01654, Bacterial Cytochrome FT Ubiquinol Oxidase, score 4.9e-27" FT misc_feature complement(join(37557..37622,37719..37784,37821..37886, FT 38124..38189,38250..38315,38397..38462,38499..38564, FT 38610..38675,38736..38801)) FT /note="9 probable transmembrane helices predicted for FT BPP3577 by TMHMM2.0 at aa 34-56, 76-98, 113-135, 147-169, FT 196-218, 238-260, 339-361, 373-395 and 427-449" FT CDS 38968..40731 FT /transl_table=11 FT /gene="glnS" FT /locus_tag="BPP3578" FT /product="putative glutaminyl-tRNA synthetase" FT /EC_number="6.1.1.18" FT /note="ortholog of Bordetella pertussis (BX470248) BP3226" FT /db_xref="GOA:Q7W4T0" FT /db_xref="HSSP:1GTR" FT /db_xref="InterPro:IPR020061" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4T0" FT /protein_id="CAE38862.1" FT /translation="MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQG FT QPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVD FT AIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRG FT TLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRV FT RHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGK FT LARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSI FT RLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNHPEGRSETCS FT APRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFT FT KDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHP FT DGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNR FT IVTLRDSWQAA" FT misc_feature 39118..40599 FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q), score 2.4e-164" FT misc_feature 39139..39174 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT CDS 40843..41721 FT /transl_table=11 FT /gene="minC" FT /locus_tag="BPP3579" FT /product="putative cell division inhibitor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3227" FT /db_xref="GOA:Q7W4S9" FT /db_xref="InterPro:IPR005526" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4S9" FT /protein_id="CAE38863.1" FT /translation="MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFF FT ENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEDANLQGARDAGLVPVELSTPV FT ARAPQVIDTAPPNDVATPVPSVPEATAEAAAKAGPQDDEADGEQADEAPAHNPESVPTR FT AARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNV FT HVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLD FT GDTLRIEALKG" FT CDS 41834..42649 FT /transl_table=11 FT /gene="minD" FT /locus_tag="BPP3580" FT /product="putative septum site-determining protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3228" FT /db_xref="GOA:Q7W4S8" FT /db_xref="HSSP:1G3Q" FT /db_xref="InterPro:IPR002586" FT /db_xref="UniProtKB/TrEMBL:Q7W4S8" FT /protein_id="CAE38864.1" FT /translation="MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRN FT LDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEK FT VIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAK FT SRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASN FT QGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK" FT misc_feature 41861..41884 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 42068..42412 FT /note="HMMPfam hit to PF00991, ParA family ATPase, score FT 8e-05" FT CDS 42653..42904 FT /transl_table=11 FT /gene="minE" FT /locus_tag="BPP3581" FT /product="putative cell division topological specificity FT factor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3229" FT /db_xref="GOA:Q7W4S7" FT /db_xref="HSSP:1EV0" FT /db_xref="InterPro:IPR005527" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4S7" FT /protein_id="CAE38865.1" FT /translation="MSFLSFLLGQKKSSASVAKERLQIILAHERGRGDSPDYLPQLQQE FT LVAVISKYVKIDPEDIKVHLERQDTLEVLEVKIEMPQN" FT CDS complement(43040..43261) FT /transl_table=11 FT /gene="osmB" FT /locus_tag="BPP3582" FT /product="osmotically inducible lipoprotein B precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3231" FT /db_xref="UniProtKB/TrEMBL:Q7W4S6" FT /protein_id="CAE38866.1" FT /translation="MKIGTLSKACMAALLAVSMAGCSSWDSMSRRQKSTVGGAALGGVA FT GAVITNGGILGTVGGAAIGGVIGDQVGK" FT misc_feature complement(43190..43261) FT /note="Signal peptide predicted for BPP3582 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.472 between residues 24 and 25" FT misc_feature complement(43196..43228) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(43459..43998) FT /transl_table=11 FT /locus_tag="BPP3583" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3232" FT /db_xref="GOA:Q7W4S5" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:Q7W4S5" FT /protein_id="CAE38867.1" FT /translation="MSALLQANQATLLIVDMQGRLMPAIHDGQAVLAAAHKLAQAARLL FT DVPVVATEHHARMLGVTVAPLDTQIQARFPKMHFSATREPGFTAWLPPARKTILVAGCE FT AHICVLQTVLGLLEEGYRALLVSDAAGSRKPADHHAALRRARGAGAEIVTTEMAIFEWM FT ETCEHPRFRDVLRLVK" FT misc_feature complement(43519..43986) FT /note="HMMPfam hit to PF00857, Isochorismatase family, FT score 9.5e-05" FT CDS complement(44019..45692) FT /transl_table=11 FT /locus_tag="BPP3584" FT /product="putative ABC transport ATP-binding subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP3233" FT /db_xref="GOA:Q7W4S4" FT /db_xref="HSSP:1US8" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W4S4" FT /protein_id="CAE38868.1" FT /translation="MAQYVYTMNRVGKIVPPKRQILRDISLSFFPGAKIGVLGLNGSGK FT STLLKIMAGVDKEIEGEAIPMPGLNIGYLPQEPELNPEHTVRQSVEEGLGAVFNAKQRL FT DEVYAAYAEPDADFDALAAEQAELEAVIAAAASSGADDIEHQMEIAADALRLPPWDAMV FT GKLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAESVEWLEQFLHKFPGTVVAVTHDR FT YFLDNAAEWILELDRGYGIPWKGNYSSWLEQKEDRLKQEEATESARQKTIKKELEWVRQ FT NPKGRQAKAKARIARFEELSSYEYQKRNETQEIFIPVGDRLGNEVIEFNHVSKAYGDRL FT LIDDLSFKVPAGAIVGIIGPNGAGKSTLFRMLAGREQPDSGEVKLGQTVKLAYVDQSRD FT SLEGNKTVFDAVADGADLLTVGKFEMPSRAYLGRFNFKGGDQNKIVGQLSGGERGRLHL FT AKTLIAGGNVLLLDEPSNDLDVETLRALEDALLEFPGSVMVISHDRWFLDRIATHILAF FT EGDSQVVFFDGNYQEYEADKKHRLGEEGAKPKRLRYKALK" FT misc_feature complement(44133..44639) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.1e-45" FT misc_feature complement(44595..44618) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(44979..45599) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.1e-48" FT misc_feature complement(45153..45197) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(45555..45578) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(45787..46704) FT /transl_table=11 FT /locus_tag="BPP3585" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3234" FT /db_xref="GOA:Q7W4S3" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W4S3" FT /protein_id="CAE38869.1" FT /translation="MRSIPSPPGAAQPQPRHMAFPLLATTIWSVNMVVTKMAADVIAPA FT SIGFYRWVLAGLLLAPFALPGVLRQWPQIRPNLGRLAVLGGLGMALYQGLMYVAAGTTT FT ATNMGIITAMVPLLTVVVGSLVLRERPALTAILGAVVSLAGLGILLGEGNPLRLLALGG FT SRGDALMGLAALAYALYGVLLRKWPMSVGPWQSLFVQVLFGIVFQLPAFLLTPASPLNA FT QNIPLVLYAGIFPSLFAPFLWMQGVRYLGPNRASIFLNLMPVVTVAIAAAFLGETPHLY FT HIAGGLMALAGVSLAQWRPARRRA" FT misc_feature complement(45811..46182) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 6.1e-24" FT misc_feature complement(join(45817..45867,45883..45933,45973..46029, FT 46060..46116,46153..46206,46252..46308,46324..46389, FT 46405..46461,46501..46557,46588..46644)) FT /note="10 probable transmembrane helices predicted for FT BPP3585 by TMHMM2.0 at aa 20-39, 49-68, 81-100, 105-127, FT 132-151, 166-184, 196-215, 225-244, 257-274 and 279-296" FT misc_feature complement(46252..46629) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 5.9e-23" FT CDS 46817..47332 FT /transl_table=11 FT /locus_tag="BPP3586" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3235" FT /db_xref="UniProtKB/TrEMBL:Q7W4S2" FT /protein_id="CAE38870.1" FT /translation="MSASAQPPASLTHFSPAELDMLAKTADALSAYLGKPVQAEVALGD FT EGTEWVTFGVALDTDADETDDAAPHVQMGGAGARLLGGRGGLPDSDTESYDCLYLWAVQ FT ISLVEGERFIKLDQDGDECAWSDQLTDVLPFALSEDELPPDDDEDDEDDEDGADDDGPG FT HNGDTHRH" FT CDS 47453..48934 FT /transl_table=11 FT /locus_tag="BPP3587" FT /product="probable hydrolase" FT /note="Similar to Agrobacterium vitis indoleacetamide FT hydrolase ta-IaaH SWALL:HYI2_AGRVI (SWALL:P25016) (467 aa) FT fasta scores: E(): 9.5e-50, 42.04% id in 459 aa" FT /db_xref="GOA:Q7W4S1" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q7W4S1" FT /protein_id="CAE38871.1" FT /translation="MTSTPPPAFPAGAKRPDLASLTAYEAARELAAGEIGSEALTAAYL FT ARIAAHPELNAFITVDADGALAQARAWDAARAAGAAAQPLGGVPIAIKDNIHVAGLPNT FT AGTPALRGFVPRAHAPVVQRLVQAGAVILGKTNMHELAYGVSGYNTAFHGERTVGVRNA FT YDTARIAGGSSAGSGAAVGARLAPAALGTDTGASIRLPAALNGGVGLRPTVGRYDAAGI FT TPISHTRDTPGPMANSVTDVMLLDAVISGEPAPAPIPATRIRLGLPAWFWTGLDPAIAA FT VARAALDKLRAAGVDLIELDMPGLKEQNQEISFVLALYEQKMDLIDYLRRYEAGPDFDG FT VVAQIASPDVRAIFTDMIAPLRLPGPDGAGLDLEPLYREAIATGRPALIGIYRDAFARH FT RIDALLFPTVPVGAPLAGPDASSLENFARLARNVDPGSNAGLPGLSLPAGLDAHGLPVG FT LELDGLPGEDRKVLAIGLMLETILGRLAPPAIAAA" FT misc_feature 47567..48868 FT /note="HMMPfam hit to PF01425, Amidase, score 4.1e-114" FT misc_feature 47837..47860 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 49067..49564 FT /transl_table=11 FT /locus_tag="BPP3588" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 17.7 FT kDa protein sc5h1.10C SWALL:Q9X7R8 (EMBL:AL049863) (160 aa) FT fasta scores: E(): 2.4e-28, 50.64% id in 156 aa" FT /db_xref="InterPro:IPR009725" FT /db_xref="UniProtKB/TrEMBL:Q7W4S0" FT /protein_id="CAE38872.1" FT /translation="MARLTRIVPCLWFDHQAEEAARYYADIFDNSRVGAISRYGETGKE FT VHGRAPGSVMTVQFELDGTPFTALNGGPAFQFSPAISLQVSCATQEEIDHYWERLGAGG FT DPRAQQCGWLADQYGLSWQIVPAMVAEWMTGDPAGVQRAMAALLGMKKLDIAALRRAYD FT GA" FT CDS complement(49577..50569) FT /transl_table=11 FT /locus_tag="BPP3589" FT /product="putative ABC transport ATP-binding subunit" FT /note="Similar to Rhizobium meliloti putative oligopeptide FT transport ATP-binding ABC transporter protein r02599 or FT smc02424 SWALL:Q92ML4 (EMBL:AL591791) (334 aa) fasta FT scores: E(): 8.9e-63, 60.42% id in 331 aa, and to Bacillus FT subtilis oligopeptide transport ATP-binding protein AppF FT SWALL:APPF_BACSU (SWALL:P42065) (329 aa) fasta scores: E(): FT 2.8e-51, 49.69% id in 326 aa" FT /db_xref="GOA:Q7W4R9" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W4R9" FT /protein_id="CAE38873.1" FT /translation="MNAPLVQVRDAARWFDVSAPWLERVLARKPRQMLRAVDGVSFEIA FT RGETLALVGESGCGKSTVARMLVGLYGLTRGAIQFDGQPLSALATPQGKQLRSRLQMIF FT QDPYASLNPRWRVGRIIAEPLLTHASLAPAQRQERVGELLRQVGLDPADQHRYPHQFSG FT GQRQRISIACALAARPQFLVCDEPTSALDVSVQAQVLNLMKDLQRELGLTYLFISHNLA FT VVHHVADRVGVMYLGKLVEVAPRDELFAQPRHPYTRMLLEAIPDLNGAGRPRTAVAGEV FT PNPLNPPTGCAFHPRCPHANARCKSEAPRALGHGLAVVACHAVEEGRPA" FT misc_feature complement(49859..50431) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 8e-58" FT misc_feature complement(50045..50089) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(50387..50410) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(50566..51540) FT /transl_table=11 FT /locus_tag="BPP3590" FT /product="putative ABC transport ATP-binding subunit" FT /note="Similar to Agrobacterium tumefaciens ABC FT transporter, nucleotide binding/ATPase protein atu4700 or FT agr_l_360 SWALL:AAL45494 (EMBL:AE009398) (324 aa) fasta FT scores: E(): 3.5e-75, 68.67% id in 316 aa, and to Bacillus FT subtilis dipeptide transport ATP-binding protein DppD or FT DciaD SWALL:DPPD_BACSU (SWALL:P26905) (335 aa) fasta FT scores: E(): 3.6e-52, 48.91% id in 323 aa" FT /db_xref="GOA:Q7W4R8" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W4R8" FT /protein_id="CAE38874.1" FT /translation="MSALLEVKNLSVEFPTRRGTLKALDDVSFTIAPGEVLGVVGESGA FT GKSLTGAAIIGLLEPPGRISAGQILLAGRRIDNLREDQMRRVRGREIGAVFQDPLTSLN FT PLYTVGRQLAETIVTHLPLSWSQARERAIELLAATGIPAARERIDHFPHQFSGGMRQRV FT VIALALAAEPRLVVADEPTTALDVSIQAQIIELLKKLCREQGASVMLITHDMGVIAETA FT DRVAVMYAGRLAEIGPVGDVIHRPRHPYTEGLMGSIPALDSHAERLVQIDGSMPRLNAI FT PPGCAFNPRCKVRLPRCGSERPELMPAGASRAACWLHDAREAA" FT misc_feature complement(50848..51441) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2e-55" FT misc_feature complement(51034..51078) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(51397..51420) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(51548..52462) FT /transl_table=11 FT /locus_tag="BPP3591" FT /product="putative binding-protein-dependent permease" FT /note="Similar to Agrobacterium tumefaciens ABC FT transporter, membrane spanning protein atu4697 or agr_l_366 FT SWALL:AAL45491 (EMBL:AE009398) (315 aa) fasta scores: E(): FT 5.1e-64, 55.96% id in 302 aa, and to Vibrio cholerae FT peptide ABC transporter, permease protein vc0173 FT SWALL:Q9KVH3 (EMBL:AE004107) (312 aa) fasta scores: E(): FT 1.8e-59, 50.33% id in 298 aa" FT /db_xref="GOA:Q7W4R7" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W4R7" FT /protein_id="CAE38875.1" FT /translation="MRAVLKRWWDSDLAWSWRYSSVAMVATLVLALLLVSAFGARWVAP FT HNPFDLTTVELLDALLPPAWSDNGQPQYLLGTDSQGRDLYSAILYGTRVSLLIGLASVA FT LSMLIGVVLGLVSGYAGGRLDALIMRVADVQLSFPAILIALLIDGVARAAVPRELHEVI FT AFPVLIGAIALAGWPQYARTVRGSTLVEKNREYVQAARVIGVAPPVIMFRHVLPNVMGP FT VLVLATVHLATAIITEATLSFLGVGVPPTAPSLGTLIRIGNDFLFSGEWWITIFPGAAL FT VLLVLSVNLVGDWLRDALNPRLN" FT misc_feature complement(join(51587..51652,51752..51817,51911..51976, FT 52022..52084,52106..52171,52334..52399)) FT /note="6 probable transmembrane helices predicted for FT BPP3591 by TMHMM2.0 at aa 21-43, 97-119, 126-147, 162-184, FT 215-237 and 270-292" FT misc_feature complement(51662..51901) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.0056" FT misc_feature complement(51812..51898) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT misc_feature complement(52346..52462) FT /note="Signal peptide predicted for BPP3591 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.945) with cleavage site FT probability 0.670 between residues 39 and 40" FT CDS complement(52462..53448) FT /transl_table=11 FT /locus_tag="BPP3592" FT /product="putative binding-protein-dependent permease" FT /note="ortholog of Bordetella pertussis (BX470248) BP3236" FT /db_xref="GOA:Q7W4R6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W4R6" FT /protein_id="CAE38876.1" FT /translation="MLAFILRRILQAAAVMLTVALLAFVLFQYVGDPVTIMLGQDATDA FT ERVELRERLGLDDAPPVQFARFVGNALQGDFGISLRQSEKVSSLIQARLPATLELSLVA FT AVLALVVGLPLGVYTALRRHGLLAQLVLAGSLLGVSLPTFLIGILLILVFSVQLGWLPS FT YGRGDTVSFGWWTSGLFTATGWKHLILPSITLSLFQMTLVLRLVRSEMLEVLRSDYIKF FT ARARGLRQRAIHFGHALKNTMVPVITITGLQLGGIIAFAIVTETVFQWPGMGLLFIQAV FT QFADVPVMAAYLCLIALVFVVINLIIDLLYFVVDPRLRSGLSRNGGH" FT misc_feature complement(join(52519..52584,52645..52710,52828..52884, FT 52990..53055,53095..53160,53356..53421)) FT /note="6 probable transmembrane helices predicted for FT BPP3592 by TMHMM2.0 at aa 9-31, 96-118, 131-153, 188-207, FT 246-268 and 288-310" FT misc_feature complement(52603..52818) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.0023" FT misc_feature complement(53365..53448) FT /note="Signal peptide predicted for BPP3592 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.986) with cleavage site FT probability 0.397 between residues 28 and 29" FT CDS complement(53528..55099) FT /transl_table=11 FT /locus_tag="BPP3593" FT /product="putative binding-protein-dependent transport FT protein (periplasmic)" FT /note="ortholog of Bordetella pertussis (BX470248) BP3237" FT /db_xref="GOA:Q7W4R5" FT /db_xref="HSSP:1B52" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q7W4R5" FT /protein_id="CAE38877.1" FT /translation="MRRTMIAIAIAAACALPSIGQAKTFRWASQGDILTFDPHSQNEGM FT TIAANSYVYEPLVAYDKDFKVVPARATEWTQVSPTLYRFKLREGVKFHDGAPFTAEDAV FT FSIHRAMAPTSNYKAYTTGIKEARKIDDYTIEIETSAPNPVLLRQLPNVFIMNKAWSEK FT HNVAKPQDFVNKEETFAARNTNGTGAYKLKSREVDVRTVFVENTEWWNKDRKIGNVTEV FT VFTPIKQNATRTAALLSGEIDFVLDPAAQDLERLRQQAKVVEGNEYRTIYIGFDQKRPE FT LLYSSVKGKNPFADVRVREALYRAIDVEAIKRAVMRGLSAPTGTMIAPQVHGWTEALHK FT RVPYDPEKARALLKEAGYDGTLSFTLDCPNNRYINDEAICQAVVGMWAKVGVKASLNAM FT PRATYFPKVQSRDTSAFLFGWGVPTFDAMYTLQNLVRTKGEGADGMYNLGDYSNKEADA FT IIDRIKTETDPTKRDADIVRALEIHAQEFGHIPLHDQVIPWAMRKNVTVIHRADNRLSA FT DWVRID" FT misc_feature complement(53534..55096) FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5, score 1.2e-49" FT misc_feature complement(55034..55099) FT /note="Signal peptide predicted for BPP3593 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.836 between residues 22 and 23" FT misc_feature complement(55058..55090) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(55217..56152) FT /transl_table=11 FT /locus_tag="BPP3594" FT /product="putative glycosyl transferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3238" FT /db_xref="GOA:Q7W4R4" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q7W4R4" FT /protein_id="CAE38878.1" FT /translation="MIDSQFQFTVLTPTYNRAVTLHRVFQSLQRQTCRDFEWVVVDDGS FT TDNTHEVVRAWQAQADFPIRYVWQHNQHKKTAFNRGVREARGMLVVGLDSDDEIPPDAL FT AILKDAWEGIPADRRETYVAVTGLCARPDGSIVGDRFPQDVFDSTAVDMYFRYRVQGEK FT FGAMRADVLRRFPFPEDVAGFVPESLVWWAISRAGYLSRFINRVVRVYHDTPGGLSQGG FT VSLSSNIQGLYLLAWDMLQHHLDWFRYRPREFIMAAARYTRFRLHLDNSGLPTAVQAYR FT LTQPSARLLVLLMWPLGYLLYRRDRRRGVA" FT misc_feature complement(55628..56128) FT /note="HMMPfam hit to PF00535, Glycosyl transferase, score FT 1.1e-28" FT CDS 56278..57285 FT /transl_table=11 FT /locus_tag="BPP3595" FT /product="putative LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP3239" FT /db_xref="GOA:Q7W4R3" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4R3" FT /protein_id="CAE38879.1" FT /translation="MAYSYFAIGRGTLAPYLSDPVMQAQTVQLNDIALFVEVAKRKSFS FT LAARALDMPTSTLSRRINQLEKAIGLRLINRNTRRLELTDAGTVYLLRCQGLIDETRLA FT REQLESLTGRPKGRLNISMPYSLAIWLLPTSLGAFLDSYPEIDCEFDLNLNASATSQGA FT PFDVILRFGRDSGDDETPDPNTVVDEIISLDSYLYASEDYLARYGEPRDPADLDRHECL FT RTAIDPEHSHWTLHNGERIERVEVSGHVAGNNISVVGTLAGLGLGITRLPHCQALDPVI FT ERNSLRRVLPQWRVQPISIYAVYPSPILPGRTRVFMDFVRPMLGPAPTGPQPRA" FT misc_feature 56362..56541 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 3.5e-18" FT misc_feature 56404..56496 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 56611..57252 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.6e-28" FT CDS complement(57355..57570) FT /transl_table=11 FT /locus_tag="BPP3596" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3239A" FT /db_xref="UniProtKB/TrEMBL:Q7W4R2" FT /protein_id="CAE38880.1" FT /translation="MPSYSDFRRRLFAPAMAGAGAAAIPLEIIMAERKRVRRNTLERRC FT LGKAFKRLFVKSPKGVFKMLEKIKRV" FT misc_feature complement(57484..57540) FT /note="1 probable transmembrane helix predicted for BPP3596 FT by TMHMM2.0 at aa 10-29" FT misc_feature complement(57505..57570) FT /note="Signal peptide predicted for BPP3596 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.837) with cleavage site FT probability 0.328 between residues 22 and 23" FT CDS 57854..63571 FT /transl_table=11 FT /gene="uvrA2" FT /locus_tag="BPP3597" FT /product="putative excinuclease ABC subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP3240" FT /db_xref="GOA:Q7W4R1" FT /db_xref="HSSP:1F2U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W4R1" FT /protein_id="CAE38881.1" FT /translation="MSSQIRIVGARQNNLKNLDLTIATGELVVVTGVSGSGKSSLAFDT FT LYAEGQRRYVETFSPYARQFLDRMDKPQVDRIEGILPAIAIDQTNPVRSSRSTVGTMTE FT LNDHLKLLFARGARLYCRGCGKQVRRDTPESVFHSLAGRAAALGDPRLVVTFPIAVPAN FT FTEDEVRGFLDQQGYTRVHAEEAASAAAPAPKARRGKSAKGAKDGAAPVARRILHVVQD FT RFRFAAAERERVMEALDTALRMGAGHLAVYAMGEEGGADQAVWKYSDRLHCADCDIEYT FT DPLPSSLSFNSPLGACEACRGFGRVIGIDIGLVIPDENKTLLEGAIKPWQTPSFKECQD FT DMVKYAPRAGIPLSVPWKSMTPEQRGWVLHGDPDWKGGNQAWKTQWYGVHKFFAWLESK FT AYKMHVRVLLSKYRSYTPCPTCHGARLKPDALLWRLGSRAEADTVLPPGEGRYQRFMPA FT GTSWSRPQLEALDGLSVHDVMQLPIERVRRFFDGLRFEGVLDAAADLLMTEVRARLKFL FT CDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMHRVVE FT VMHRLRDAGNTLVVVEHDPQVMVAADRIIDIGPGPGERGGRIVFDGSPAQLRAANTLTG FT DYLGGRQRVEAPRPMPVANNTPRLILEGATAHNLNNVSIELPLGRLVCVTGVSGSGKST FT LVQDVLYPALLKQKGKPSEAPGAFDRLLGAEQIADVVMVDQTPIGKTARSNPASYVGAF FT DAIRKLYAQAALSKERGYTAGTFSFNSGDGRCPTCGGTGFEHVEMQFLSDVYLRCPDCD FT GKRFRPEVLEVRVEHLGKSASIDQVLEMTVSEALEFFKGLRDVQTGLAPLADVGLEYVR FT LGQPVPTLSGGEAQRLKLAGHLAEAARSGISTAKVAKKGSLFLFDEPTTGLHFDDVARL FT MRAFRKLLAAGHTLLVIEHNLDVIRAADWLIDLGPEGGDAGGEVVGVGTPQDLMANDRS FT HTGLALRDYEGSILPVAPVSALAEPAAAYGEEAGTPLQSLMRRRRQAAQSIEIRNAREH FT NLKNVNVEIPRDKFTVITGVSGSGKSTLAFDILFNEGQRRYLESLNAYARAIVQPAGKP FT DVDAIFGIPPTVAIEQRTSRGGRKSTVATMTEIHHFLRLLYVKLGTQYCPDCKVAVEPQ FT NADQIVARLLREHKGQHIGVLAPLVTARKGYYTDLAKWAGSKGHTHLRVDGAFIPVSPW FT PRLDRYKEHTIELPVADVVVDPGNEAALRDAVRQALEHGQGVLSVVYPLDRLRAGLDGD FT LQQQHFSVKRACPSCGVSFPEPDPRLFSYNSKHGWCGGCFGTGLQLQGFDAEQTGEETA FT WNAWYEGEARTCTVCHGQRLNRVALAVRWRDRSIAELAALPVSDAHTFFTGLVTRGREG FT EIARDILAEIRGRLNFMQEVGLSYLALDRAAPTLSGGEAQRIRLAAQLGSNLQGVCYVL FT DEPTIGLHPRDNRILLDALARLEGNGNTLVVVEHDDDTIRRASHIIDIGPGAGIRGGRV FT VAQGSVQDLIDAPESVTGRYLAKPLAHPLNGRRAVTADTPMIRVHGARLHNLRSVDASI FT PIGRLSVVTGVSGSGKSTLAREVLLDNLVQAVSQGKAPGWSGCERITGWEVIDRVLEVD FT QTPIGKTPRSCPATYVGFWDDVRKQFADTREARMRGWTAARFSFNTGDGRCPICEGQGM FT RTIEMSFLPDVKVPCDACNGARFSSDTLSVQMRGKNAGELLAMEVDDAIGYFAAHPKIH FT RPLQLMQDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKARLTEGVITTGRASRAPHTL FT YVLDEPTVGLSMADVEKLIHVLHRLVEAGNTVVVIEHNLDVIAEADWLLDLGPEGGSGG FT GQLVAEGSPEHVVSLRERSHTGRVLSEFLQQ" FT misc_feature 57926..59683 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.9e-06" FT misc_feature 57947..57970 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 59888..60745 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 4.5e-24" FT misc_feature 59909..59932 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 61031..62389 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 4.9e-07" FT misc_feature 61052..61075 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 61916..61933 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature 62159..62203 FT /note="PS00211 ABC transporters family signature." FT misc_feature 62597..63454 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.3e-15" FT misc_feature 62618..62641 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 63188..63232 FT /note="PS00211 ABC transporters family signature." FT CDS 63577..64704 FT /transl_table=11 FT /locus_tag="BPP3598" FT /product="putative chorismate-binding enzyme" FT /note="ortholog of Bordetella pertussis (BX470248) BP3241" FT /db_xref="GOA:Q7W4R0" FT /db_xref="HSSP:1K0G" FT /db_xref="InterPro:IPR019999" FT /db_xref="UniProtKB/TrEMBL:Q7W4R0" FT /protein_id="CAE38882.1" FT /translation="MECRFEDRLAGRALRLAGDPIRIEARSADAVAPALREIERARAGG FT RWIALLLDYELGEWLLPEALRAPASGAAPAPREDGRARLTALAFERAEVEAPWPAPATP FT AARIVSVAPRMARDDYLRAVDAIRELIAAGELYQVNYTQPLDVRIEGDPRLLYRQIAAR FT HPVGNGAYIEDGERTILSFSPELFVARQGERLVTRPMKGTAPRHADPAEDARLGRELLA FT SDKNGAENLMIVDLLRNDLGRLATPGSVKVDALFSLERYPTVWTMTSTVSAHAPHAGLA FT DVLRALFPCGSITGAPKIAAMRRIRQMEAAPRGLYCGSIGWLAPDGDFSLNVAIRTLVL FT DRAGHGVYGVGGGIVHDSDAAQEWQECHWKARILG" FT misc_feature 63922..64698 FT /note="HMMPfam hit to PF00425, chorismate binding enzyme, FT score 7.1e-83" FT CDS 64760..65386 FT /transl_table=11 FT /locus_tag="BPP3599" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3242" FT /db_xref="GOA:Q7W4Q9" FT /db_xref="InterPro:IPR001544" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q9" FT /protein_id="CAE38883.1" FT /translation="MQPELIETILVTADRQLPLLGRHLARLLTSCQALRYRCNEPAVES FT AIMAAVRGLHAPGPHRLRLLLARDGSHDIQTAPLAPLPPDQEVMLAPEALDADEPLLRY FT KTTYRPWYAHTIEWLPSHPRVFDLLYLNQHGELCEGSRSNVYLELGGRWYTPPIASGCL FT PGVQRAELIDQGKVQERTLTMSDLRSAESIRLSNALRGWIEVQYH" FT CDS complement(65558..66268) FT /transl_table=11 FT /locus_tag="BPP3600" FT /product="putative oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3244" FT /db_xref="GOA:Q7W4Q8" FT /db_xref="HSSP:1Q7B" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q8" FT /protein_id="CAE38884.1" FT /translation="MSRPVVLVTGASRGIGRAIAQRLLADGYDVVNFSRGKPADVLPGE FT RFVPVDLSDTEAARRTATELAAQREVLHLVNNAGLIEVAGIDQVAPDAMQRTLALNLVA FT PLVLLQALLPGMRARGYGRVVNIGSRAALGKPGRSAYGASKAGLAGMSRTWALELAPAG FT ITVNVVAPGPIATELFNQSNPPGDPRTRQLEAAIPVGRVGRPDEVAHAVASLLDPRAGF FT ITGQVLYVCGGMTV" FT misc_feature complement(65567..66265) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 1.7e-55" FT CDS complement(66265..67269) FT /transl_table=11 FT /locus_tag="BPP3601" FT /product="putative conserved membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3245" FT /db_xref="GOA:Q7W4Q7" FT /db_xref="InterPro:IPR000209" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q7" FT /protein_id="CAE38885.1" FT /translation="MKRTPGQWRACRAAVRALIVACMATLAAQAGAAGYPEHPVTVVVP FT YPPGGAADIFGRAIAHAMQPHLKQTVLVENRPGAGGNVGMTYVTRSKPDGYTLGLGTIG FT TQSINQFLYADMPYDPGRDLVPVALVSTTPNVLAVSARSPYRTLADVIEAARQRKDNKL FT TYASPGVGSSVHLTGAYFEAVAGISLLHVPFKGTSASLPAVAGGQVDLLFDNLPGALAQ FT IKDGSLVRGIAITSAQRDPSVPDLPTFAEAGVAGFDVTAWFALYAPRGTPQPVVEQLVA FT AARQGLQAPELARQFGAMGARPGDKFGAQLGQFEQAERQKWGELIKQRGIRAQ" FT misc_feature complement(66277..67107) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 9.2e-98" FT misc_feature complement(66652..66684) FT /note="PS00138 Serine proteases, subtilase family, serine FT active site." FT misc_feature complement(67165..67230) FT /note="1 probable transmembrane helix predicted for BPP3601 FT by TMHMM2.0 at aa 13-35" FT misc_feature complement(67174..67269) FT /note="Signal peptide predicted for BPP3601 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.488 between residues 32 and 33" FT CDS 67365..68996 FT /transl_table=11 FT /locus_tag="BPP3602" FT /product="putative fatty acid CoA ligase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3246" FT /db_xref="GOA:Q7W4Q6" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q6" FT /protein_id="CAE38886.1" FT /translation="MRAALAPLPEAAMPAAELFATRPDTHARERPEAVALIDRDRPVTH FT AALRAGVLDLAGGLAALGVCRGERVALWLPNCAHWVTMFLACARLGALTLAVNTRFRAQ FT ELGDILGRGQADWLVYWPGFKGIDFAGILAAVPPAARARLRGAIVVDGSGAQATPGPAG FT LAAHALAALHGPAPLPAPNAGVLCFTTSGTTSLPKFVLHDQDTLLRHGDAIARSYGYDD FT DSRILASAPFCGAFGFATLVGALARGVPVICEPAFDAARSVAAVRRHRVTHTYANNEAL FT VQMFRLGERADFATARLFGFASFAPALGDLLPLARAQGVPLTGLYGSSELIALVAAQPR FT EPADGDVSVRYEPGGALIHPEARVRARDPQDGRILADGESGEIEILAPSLMRGYLDNPQ FT ASAGALTDDGYFRTGDLGYTLGTRQFVFQTRMGDSLRLSGFLVNPAEIEQAVEALPGIR FT ACQVVGATRDGKTVPYAFVLLDAGASPDPPGWMAACRQGMAGFKVPAGFQVLEAFPVVE FT SANSAKIQKHKLREQAEALLAAAPAA" FT misc_feature 67494..68750 FT /note="HMMPfam hit to PF00501, AMP-binding enzyme, score FT 2.6e-64" FT misc_feature 68754..68777 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 68999..69736 FT /transl_table=11 FT /locus_tag="BPP3603" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP3247" FT /db_xref="GOA:Q7W4Q5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q5" FT /protein_id="CAE38887.1" FT /translation="MSAARLFARSPQPLYLQAAAVFRGHIQTGVWRPGRQIPPLDALAA FT RYGIARSTVRQALGLLEADGLIRRSRGSGTFVEDTLPETPTLLIPKNWAETVALSRQLG FT TVALHESSAQQPLPDDLGIPCDFARDGRFQYLRRLHTAAAGPFCFSEVYLESALFRKHR FT AEIRASTVTPVLDRHYRARLSHARQVLNVIEAGAASAQALRIPVSAPVAELRRYVCIDA FT RVVYFARLEFPFHKVRMEFDLLR" FT misc_feature 69050..69229 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 3.1e-16" FT CDS complement(69824..70696) FT /transl_table=11 FT /locus_tag="BPP3604" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3248" FT /db_xref="GOA:Q7W4Q4" FT /db_xref="HSSP:1JW9" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q4" FT /protein_id="CAE38888.1" FT /translation="MAPMNSQPSVIAPACEADAERRFGGLARLYGPDAPAALRGAHVAV FT AGLGGVGSWTAEALARCGVGALTLIDLDHIAESNVNRQIHALSDTLGQAKIEAMAQRIG FT QINPACAVTRVDEFVAPDNVMQVLGGPYAAIVDCTDQAAAKIAMILHARQRGVPLLLCG FT GAGGKTDPLALRAGDLSEAVNDALLAKLRNKLRREHGFPRASDANGKVRKRVPRMGVRA FT LWFDQPAILPDAWTRAVEGEDDMGAAGTRAAPQGLSCAGYGSVVTVTAAMGLAAANEVL FT GWVVGKPGA" FT misc_feature complement(70169..70582) FT /note="HMMPfam hit to PF00899, ThiF family, score 1.9e-34" FT CDS 70965..72185 FT /transl_table=11 FT /locus_tag="BPP3605" FT /product="putative inner membrane efflux protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3249" FT /db_xref="GOA:Q7W4Q3" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q3" FT /protein_id="CAE38889.1" FT /translation="MSTSDPTPSRPTHGPELSGAGYLCLLAMLNHMALTGGRITVSLTA FT LKLGLSTFTVGMLVAVFAVLPMFASVHAGRWVDKIGVVRPLVIGSSLVTFGTALPFVSQ FT TQAALLVASCCIGIGFMLHQVATQDLLGHAEPRERLRNFSWMSLALAASGFSGPLIAGL FT AIDHLGTRLAFGMLALGPMLSLVGLYLLRQPLRTMNGALTGGSNRPAERRRITELLAVP FT PLRRILMVNTILSGAWDTHLFVVPIFGVAIGLSATTIGVILAAFAAATFVIRLVLPFIQ FT TRVRSWTLVRAAMATAAIDFLLYPFFTDVGMLIGLSFVLGLALGCCQPSMLSLLHQYSP FT PGRAAEAVGLRMALINASQVSLPLTFGALGAVIGVAPLFWAYALALVAGGWANRNPPQE FT SDSSKSS" FT misc_feature join(71019..71087,71106..71174,71202..71270,71289..71348, FT 71391..71459,71478..71537,71736..71804,71865..71933, FT 72048..72116) FT /note="9 probable transmembrane helices predicted for FT BPP3605 by TMHMM2.0 at aa 19-41, 48-70, 80-102, 109-128, FT 143-165, 172-191, 258-280, 301-323 and 362-384" FT CDS 72182..72841 FT /transl_table=11 FT /locus_tag="BPP3606" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3250" FT /db_xref="InterPro:IPR006840" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q2" FT /protein_id="CAE38890.1" FT /translation="MNTQSPPSPHDPHGAAALPFRLWTAEERRASLDTALREWRDGEDV FT WVYGYGSLIWRPDFDFVERRLATLHGHHRALCLWSRVNRGTPECPGLVFGLDRGGSCRG FT VVYRLAGRQVPDYFPALWDREMSTGAYLPRWLRCATEHGPVNALVFIMNRANPAYIRAL FT PEPELLAIVRRASGRYGPCTEYVVQTAQALRQAGIRDARLEQIARQLEAEVHPLGV" FT CDS 72913..73545 FT /transl_table=11 FT /gene="pdxH" FT /locus_tag="BPP3607" FT /product="pyridoxamine 5'-phosphate oxidase" FT /EC_number="1.4.3.5" FT /note="ortholog of Bordetella pertussis (BX470248) BP3251" FT /db_xref="GOA:Q7W4Q1" FT /db_xref="HSSP:1NRG" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4Q1" FT /protein_id="CAE38891.1" FT /translation="MSVSDLRQSYEKGVLVEEQAAASPFQQFARWFDEAVAARVPEPNA FT MTLATVNAEGQPSARIVLIKGYDDAGFVFFTNYESRKGLDLDANPRASLLFFWQPLERQ FT VRIEGVIEKVSAAESDEYFHSRPLGSRLGAWASRQSQPITRDELEAREREFRDRYGEHP FT PRPPHWGGYRLKPNRFEFWQGRPSRLHDRLRYEPDGKQGWTIDRLSP" FT misc_feature 72916..73539 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF01243, Pyridoxamine 5'-phosphate FT oxidase, score 2.8e-100" FT misc_feature 73447..73488 FT /note="PS01064 Pyridoxamine 5'-phosphate oxidase FT signature." FT CDS 73575..74093 FT /transl_table=11 FT /locus_tag="BPP3608" FT /product="putative monooxygenase component" FT /note="ortholog of Bordetella pertussis (BX470248) BP3252" FT /db_xref="GOA:Q7W4Q0" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:Q7W4Q0" FT /protein_id="CAE38892.1" FT /translation="MSAAFPPAFDAAFFRTALGRFATGVTVVTTAGPDGQPVGLTVSSF FT NSVSLNPPLILWSLARTSSSLAAFERCQRYVVNVLSASQIALARRFATGKTPERFAGLT FT LAQAPAGTPMLGEGCAAWFECRNRSRYEEGDHIIMVGQVEHCGHSGVPPLVFHAGSFDL FT TPPHGGASS" FT misc_feature 73626..74069 FT /note="HMMPfam hit to PF01613, Flavin reductase like FT domain, score 1.2e-47" FT CDS 74104..75213 FT /transl_table=11 FT /locus_tag="BPP3609" FT /product="putative conserved exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3253" FT /db_xref="GOA:Q7W4P9" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q7W4P9" FT /protein_id="CAE38893.1" FT /translation="MSTDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSS FT RNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLD FT SIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAEND FT GAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPQD FT SIPPEYLCKGSYFTLAGRAPFSRLIYPVPQHAGLGVHLTLELGGQAKFGPDTEWITTED FT YTLDPRRADVFYAAVRSYWPALPDGALAPGYTGIRPKISGPHEPAADFAIAGPASHGVA FT GLVNLYGIKSPGLTASLAIAEETLARLAA" FT misc_feature 74104..74175 FT /note="Signal peptide predicted for BPP3609 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.813) with cleavage site FT probability 0.780 between residues 24 and 25" FT misc_feature 74116..75195 FT /note="HMMPfam hit to PF01266, FAD dependent FT oxidoreductase, score 0.0018" FT CDS 75260..76114 FT /transl_table=11 FT /locus_tag="BPP3610" FT /product="putative formyltetrahydrofolate deformylase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3254" FT /db_xref="GOA:Q7W4P8" FT /db_xref="HSSP:1GRC" FT /db_xref="InterPro:IPR004810" FT /db_xref="UniProtKB/TrEMBL:Q7W4P8" FT /protein_id="CAE38894.1" FT /translation="MQHNDYILTLSCPDRTGIVFRVSGLLFELGCNIRDSQQFGDEETG FT RFFLRVHFDLPRAAAESALREQFAALANGYDMQWQIHDAHRKARLLIMVSKQGHCLNDL FT LFRVSSGQLRAEVAAIVSNHNDYASLAASYGIPFHHMPVTPDTKAAQERQVLELVEREQ FT IDLVVLARYMQILSADMCQALAGRAINIHHSFLPSFKGARPYHQAHARGVKIIGATAHY FT VTSDLDEGPIIEQDIERVDHTMTAADLTQVGSDIESLVLSRAVRSHVEHRILLNRSKTV FT VFR" FT misc_feature 75275..75487 FT /note="HMMPfam hit to PF01842, ACT domain, score 7e-09" FT misc_feature 75521..76054 FT /note="HMMPfam hit to PF00551, Formyl transferase, score FT 1.3e-40" FT CDS complement(76116..77018) FT /transl_table=11 FT /locus_tag="BPP3611" FT /product="putative LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP3255" FT /db_xref="GOA:Q7W4P7" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4P7" FT /protein_id="CAE38895.1" FT /translation="MDLEPRLLRYFIAVAQERNFSRAAQRLHISQPPLSYAIRQLETQL FT GARLFERSSRHVALTDAGRVLYGEALSLLRQGEEVGRLVRHAEAGLQGRLRIGFVGSML FT YRGLPDLLAALRAELPDVEQVLAERNSHDQLEALRRGELDLGFIHANPPPEGVSARDLV FT AEPFVVCLPDTHRLAGQRSLRLADLAGEDFVFFAQAASPSYYETVLSLCVAAGFHPAVR FT HEVRHWLSVAALVASGLGVSIVPACLARAGLAGTCYVAFEHQARSVCQIAWPSLAPTSL FT QATALQAALRHFAPPPVRA" FT misc_feature complement(76134..76757) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.5e-45" FT misc_feature complement(76827..77006) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2.9e-28" FT misc_feature complement(76872..76964) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 77128..78837 FT /transl_table=11 FT /locus_tag="BPP3612" FT /product="putative oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) FT BP3256+BP0255" FT /db_xref="GOA:Q7W4P6" FT /db_xref="InterPro:IPR013764" FT /db_xref="UniProtKB/TrEMBL:Q7W4P6" FT /protein_id="CAE38896.1" FT /translation="MDTLSSTDTSATAASPVPDARGLNLFRADPYAAGLARCYLPADLC FT DHLLPHLDRLGALAGGRMDELAMTADRHPPTLSVRHRTGTDESRIDKHPAYVELERLAY FT SEFGLAALSHRGGVLGWPDPMPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGD FT PALVEQVLPQVITQDFDQLQQGAMFMTEQGAGSDVSATTVTAQAQADGRWALHGDKWFC FT SNPDAGFAMVLARSEPDAGLRGVSLFLLPRRLPDGSPNHYRILRLKDKLGTRSMASGEI FT RLEGALAWLVGQRGQGFKHMADMINNSRLSNGMRAAGLMRRALTEAVFFAQQRRAFGKR FT LIDMPLMRRQLAKMAMRAEQARSVMFQTAQALAAADRGEGEAALPRILTPLIKFRACRD FT ARQVTGDAMEVRGGCGYIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRKADALPA FT LQRHVQALLAAGAPCPPELAPIQARAFDGAYALAAHAAAHERDDLARQAASALYHVVAI FT AALRWEAARDPRLASRAALADLALRHRLAPRDPCALPADDDAACRAVLQTAL" FT misc_feature 77692..78000 FT /note="HMMPfam hit to PF02770, Acyl-CoA dehydrogenase, FT middle domain, score 3.8e-08" FT misc_feature 78010..78480 FT /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, FT C-terminal domain, score 3.9e-49" FT misc_feature 78352..78411 FT /note="PS00073 Acyl-CoA dehydrogenases signature 2." FT CDS 78873..79853 FT /transl_table=11 FT /locus_tag="BPP3613" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0254" FT /db_xref="GOA:Q7W4P5" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W4P5" FT /protein_id="CAE38897.1" FT /translation="MQQLIRSLVLAAGLALLGGAAAPALADYPDRPVTLVVPFPPGGPT FT DAMARRLAEGLKTQLDQTVVVENRGGAGGNIGAELVAHAKPDGYTLLFGTSGPLAINIS FT LYKKQNYDPRTSFAPIVRIGHLPNILVVHPSVPANNVQELIAYAKANPDKLSYASSGNG FT ASSHLAGVLFNRMAGTRILHVPYKGTGPALNDLLGGQVSMSFTDILTALPHIQAGKLKA FT IGLASAQRSQALPELPTIAEQGLAGYDVSVFFGIVAPKGTPDAIVQKLNAAFIAALDAP FT EVRDTLRKQGIVPAPERTPQALAGFINEEVDKWGELIRAAQISLD" FT misc_feature 78873..78950 FT /note="Signal peptide predicted for BPP3613 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.989 between residues 26 and 27" FT misc_feature 78891..78950 FT /note="1 probable transmembrane helix predicted for BPP3613 FT by TMHMM2.0 at aa 7-26" FT misc_feature 79014..79841 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 3.5e-122" FT CDS 79867..80991 FT /transl_table=11 FT /locus_tag="BPP3614" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0253" FT /db_xref="GOA:Q7W4P4" FT /db_xref="HSSP:1PQY" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7W4P4" FT /protein_id="CAE38898.1" FT /translation="MAVAALPPGALQGCRVIDLSRVLGGPYCTQILADHGADVLKIEPP FT GGDETRGWGPPFSGQTASYFIGVNRNKRGMALDLSQPAGQELLRGLLADADVLVENFKP FT GTLEKWGLGYDTLSQAFPRLVHCRVSGFGADGPLGGLPGYDACAQAMCGLMSVNGEADG FT PATRVGLPVVDMVTGLNAAVAVLLALQERQRSGLGQFLDITLYDCALSLLHPHAPNYFY FT SGRVPTRTGNAHPNIAPYETLPTGAGPIFLAVGNNRQFAALADALGAPQLAQDARFASN FT AERLAHRDALCAALTELLRPHEAASLAERLLRLGVPAAAVLDVAQALDHPHARHRGMLL FT EAGDYRGIASPIKLSRTPARLRSVPPTLQEPAGA" FT misc_feature 80089..80658 FT /note="HMMPfam hit to PF02515, CAIB/BAIF family, score FT 2e-64" FT CDS complement(80999..82753) FT /transl_table=11 FT /gene="ggt" FT /locus_tag="BPP3615" FT /product="gamma-glutamyltranspeptidase" FT /EC_number="2.3.2.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP0252" FT /db_xref="GOA:Q7W4P3" FT /db_xref="InterPro:IPR000101" FT /db_xref="UniProtKB/TrEMBL:Q7W4P3" FT /protein_id="CAE38899.1" FT /translation="MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERA FT QAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVH FT YDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHR FT QHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVG FT HRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVRE FT PVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFA FT DRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAI FT EVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVA FT NRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIA FT LPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPR FT REGLALGD" FT misc_feature complement(81014..82558) FT /note="HMMPfam hit to PF01019, FT Gamma-glutamyltranspeptidase, score 1.4e-176" FT misc_feature complement(82688..82753) FT /note="Signal peptide predicted for BPP3615 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 22 and 23" FT CDS 82860..83756 FT /transl_table=11 FT /locus_tag="BPP3616" FT /product="LysR family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0251" FT /db_xref="GOA:Q7W4P2" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q7W4P2" FT /protein_id="CAE38900.1" FT /translation="MRLRHIEIFEAIRRTGSLTEAAALHISQPAASKLLAHAEAQLGFK FT LFERVKGRLVATRETEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGL FT LPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANDHPGLTRTSLGHTE FT LVHLSRRPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVA FT CALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIER FT LRQACSVLQAQPAPQPE" FT misc_feature 82866..83042 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 4.5e-11" FT misc_feature 83112..83720 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 5.4e-33" FT CDS complement(83821..84804) FT /transl_table=11 FT /locus_tag="BPP3617" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0250" FT /db_xref="GOA:Q7W4P1" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W4P1" FT /protein_id="CAE38901.1" FT /translation="MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGS FT TDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNP FT ACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSLG FT TCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKL FT RAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALK FT DPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD" FT misc_feature complement(83833..84660) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.9e-104" FT misc_feature complement(84727..84783) FT /note="1 probable transmembrane helix predicted for BPP3617 FT by TMHMM2.0 at aa 7-26" FT misc_feature complement(84730..84804) FT /note="Signal peptide predicted for BPP3617 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.968 between residues 25 and 26" FT CDS 84940..85920 FT /transl_table=11 FT /locus_tag="BPP3618" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0249" FT /db_xref="GOA:Q7W4P0" FT /db_xref="InterPro:IPR004776" FT /db_xref="UniProtKB/TrEMBL:Q7W4P0" FT /protein_id="CAE38902.1" FT /translation="MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRH FT KLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWL FT AGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAV FT YGLARHSGNGLLRELARNPLLVSTLLGLACNLAGLSLPGPIDTVMARLGAAALALGIMC FT VGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTAS FT AAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN" FT misc_feature join(84976..85044,85102..85161,85198..85266,85372..85440, FT 85477..85545,85558..85626,85651..85719,85747..85815, FT 85828..85896) FT /note="9 probable transmembrane helices predicted for FT BPP3618 by TMHMM2.0 at aa 13-35, 55-74, 87-109, 145-167, FT 180-202, 207-229, 238-260, 270-292 and 297-319" FT CDS complement(85937..87328) FT /transl_table=11 FT /gene="fumC" FT /locus_tag="BPP3619" FT /product="fumarate hydratase class II" FT /EC_number="4.2.1.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP0248" FT /db_xref="GOA:Q7W4N9" FT /db_xref="InterPro:IPR000362" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4N9" FT /protein_id="CAE38903.1" FT /translation="MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVA FT AMARLKRAAAKVNAELGELDPQVADAIMRAADEVVAGKWPDEFPLSVWQTGSGTQSNMN FT MNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPAL FT KALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLH FT QLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALK FT TLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVM FT GNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITE FT LVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDM FT TNARR" FT misc_feature complement(85961..87298) FT /note="HMMPfam hit to PF00206, Lyase, score 2.5e-197" FT misc_feature complement(86354..86383) FT /note="PS00163 Fumarate lyases signature." FT CDS 87480..88016 FT /transl_table=11 FT /locus_tag="BPP3620" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0247" FT /db_xref="HSSP:1HTW" FT /db_xref="InterPro:IPR003442" FT /db_xref="UniProtKB/TrEMBL:Q7W4N8" FT /protein_id="CAE38904.1" FT /translation="MSAPPTTLCLHLPDEAATEDLARQLAPLVDGRRGGQPGGQIHLQG FT DLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAG FT FRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVP FT PPTARSLPAPPPADA" FT misc_feature 87531..87917 FT /note="HMMPfam hit to PF02367, Uncharacterised P-loop FT hydrolase UPF0079, score 2e-37" FT misc_feature 87612..87635 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 88088..89332 FT /transl_table=11 FT /gene="amiC" FT /locus_tag="BPP3621" FT /product="N-acetylmuramoyl-L-alanine amidase" FT /EC_number="3.5.1.28" FT /note="ortholog of Bordetella pertussis (BX470248) BP0246" FT /db_xref="GOA:Q7W4N7" FT /db_xref="InterPro:IPR002508" FT /db_xref="UniProtKB/TrEMBL:Q7W4N7" FT /protein_id="CAE38905.1" FT /translation="MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAA FT LNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDL FT YPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAP FT PIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQ FT PYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGAS FT STQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKI FT NRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDR FT YFTANPPLARVGDVS" FT misc_feature 88814..89293 FT /note="HMMPfam hit to PF01520, N-acetylmuramoyl-L-alanine FT amidase, score 8.5e-60" FT CDS complement(89475..90113) FT /transl_table=11 FT /gene="dedA" FT /locus_tag="BPP3622" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0245" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:Q7W4N6" FT /protein_id="CAE38906.1" FT /translation="MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPF FT LPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLD FT RNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVI FT SLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ" FT misc_feature complement(join(89496..89561,89592..89657,89850..89915, FT 89976..90041)) FT /note="4 probable transmembrane helices predicted for FT BPP3622 by TMHMM2.0 at aa 24-46, 66-88, 152-174 and FT 184-206" FT misc_feature complement(89553..90032) FT /note="HMMPfam hit to PF00597, DedA family, score 2.5e-22" FT CDS 90200..92089 FT /transl_table=11 FT /gene="mutL" FT /locus_tag="BPP3623" FT /product="DNA mismatch repair protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0244" FT /db_xref="GOA:Q7W4N5" FT /db_xref="HSSP:1BKN" FT /db_xref="InterPro:IPR014790" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4N5" FT /protein_id="CAE38907.1" FT /translation="MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARA FT IEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALA FT SIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRS FT EATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVDHVLP FT VQAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQP FT AYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPD FT GAAPDAAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAG FT IPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRG FT LVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELG FT FEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACH FT GSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ" FT misc_feature 90263..90655 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90-like ATPase, score 4.3e-10" FT misc_feature 90488..90508 FT /note="PS00058 DNA mismatch repair proteins mutL / hexB / FT PMS1 signature." FT misc_feature 90836..91177 FT /note="HMMPfam hit to PF01119, DNA mismatch repair protein, FT C-terminal domain, score 2e-29" FT CDS 92086..93027 FT /transl_table=11 FT /gene="miaA" FT /gene_synonym="trpX" FT /locus_tag="BPP3624" FT /product="tRNA delta(2)-isopentenylpyrophosphate FT transferase" FT /EC_number="2.5.1.8" FT /note="ortholog of Bordetella pertussis (BX470248) BP0243" FT /db_xref="GOA:Q7U372" FT /db_xref="InterPro:IPR018022" FT /db_xref="UniProtKB/Swiss-Prot:Q7U372" FT /protein_id="CAE38908.1" FT /translation="MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMD FT IGTAKPSAAERAQVPQHLLDIRDPAQSYSAAKFRADALRLIAEIHARGRIPLLAGGTML FT YYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQ FT RALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAG FT LVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLT FT WLRAQPERVIIDCLAGDAVARTVDAMARALPD" FT misc_feature 92086..92160 FT /note="Signal peptide predicted for BPP3624 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.996) with cleavage site FT probability 0.522 between residues 25 and 26" FT misc_feature 92116..92139 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 92197..92970 FT /note="HMMPfam hit to PF01715, IPP transferase, score FT 2.5e-119" FT CDS complement(93133..94182) FT /transl_table=11 FT /gene="purM" FT /gene_synonym="purG" FT /locus_tag="BPP3625" FT /product="phosphoribosylformylglycinamidine cyclo-ligase" FT /EC_number="6.3.3.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP0242" FT /db_xref="GOA:Q7W4N4" FT /db_xref="InterPro:IPR004733" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4N4" FT /protein_id="CAE38909.1" FT /translation="MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLVGIG FT GFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEP FT LYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAV FT GAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDV FT VMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPK FT LFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQ FT DGMAQTVVV" FT misc_feature complement(93142..93654) FT /note="HMMPfam hit to PF02769, AIR synthase related FT protein, C-terminal domain, score 1.1e-50" FT misc_feature complement(93682..94164) FT /note="HMMPfam hit to PF00586, AIR synthase related FT protein, N-terminal domain, score 1.7e-66" FT CDS 94390..95136 FT /transl_table=11 FT /locus_tag="BPP3626" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0241" FT /db_xref="GOA:Q7W4N3" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W4N3" FT /protein_id="CAE38910.1" FT /translation="MRRAPRSGKPVLSPYMNRQLLLDVLPAPAPTLNNYIAGPNGQALA FT AAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMP FT RLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRL FT GWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDR FT YSLATGRPITTPLLRAMLADPHSQAT" FT CDS 95133..95831 FT /transl_table=11 FT /locus_tag="BPP3627" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0240" FT /db_xref="GOA:Q7W4N2" FT /db_xref="InterPro:IPR006385" FT /db_xref="UniProtKB/TrEMBL:Q7W4N2" FT /protein_id="CAE38911.1" FT /translation="MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRND FT DLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTAQAVDVVRGH FT LAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVR FT VNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVID FT LFDHLEDAKS" FT CDS 95832..97187 FT /transl_table=11 FT /gene="pcnB" FT /locus_tag="BPP3628" FT /product="poly(A) polymerase" FT /EC_number="2.7.7.19" FT /note="ortholog of Bordetella pertussis (BX470248) BP0239" FT /db_xref="GOA:Q7W4N1" FT /db_xref="InterPro:IPR002646" FT /db_xref="UniProtKB/TrEMBL:Q7W4N1" FT /protein_id="CAE38912.1" FT /translation="MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCD FT VLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVV FT FGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEV FT IDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMAS FT LIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELA FT LERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTE FT KLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVL FT AQWWMDLANGDDATRAEMIEETAHLPREASDAPAQKRRRPRRRPSNRPREPQ" FT misc_feature 96165..96644 FT /note="HMMPfam hit to PF01743, Poly A polymerase family, FT score 6.3e-53" FT misc_feature 96690..96713 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 97184..97675 FT /transl_table=11 FT /gene="folK" FT /locus_tag="BPP3629" FT /product="2-amino-4-hydroxy-6-hydroxymethyldihydropteridi FT ne pyrophosphokinase" FT /EC_number="2.7.6.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP0238" FT /db_xref="GOA:Q7W4N0" FT /db_xref="HSSP:1CBK" FT /db_xref="InterPro:IPR000550" FT /db_xref="UniProtKB/TrEMBL:Q7W4N0" FT /protein_id="CAE38913.1" FT /translation="MNGSPASALAYVGLGANLGDAAATLRSVLAELAAAPGILACKASR FT LYRTAPVDAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLL FT LYGEQAIDHPRLSVPHPRIHERAFVLAPLCELAPGLRLAQGDCAALLAALEDQAIEPLR FT " FT misc_feature 97184..97249 FT /note="Signal peptide predicted for BPP3629 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.640) with cleavage site FT probability 0.365 between residues 22 and 23" FT misc_feature 97208..97594 FT /note="HMMPfam hit to PF01288, FT 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK), FT score 2.8e-50" FT misc_feature 97460..97495 FT /note="PS00794 FT 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase FT signature." FT CDS complement(97694..98650) FT /transl_table=11 FT /locus_tag="BPP3630" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0237" FT /db_xref="GOA:Q7W4M9" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W4M9" FT /protein_id="CAE38914.1" FT /translation="MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDAL FT ARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQ FT VPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQAL FT ATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTG FT SKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQML FT ERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP" FT misc_feature complement(97703..98518) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 6.5e-90" FT misc_feature complement(98582..98650) FT /note="Signal peptide predicted for BPP3630 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.998 between residues 23 and 24" FT CDS complement(98677..100071) FT /transl_table=11 FT /locus_tag="BPP3631" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0236" FT /db_xref="GOA:Q7W4M8" FT /db_xref="InterPro:IPR005656" FT /db_xref="UniProtKB/TrEMBL:Q7W4M8" FT /protein_id="CAE38915.1" FT /translation="MTMNQAVSPLAGTPAVSAELARFAATSRWEDVPQAVRHEGRRSLL FT NYFAVALAAARDPVLDTATRTYARFASDARASLVGRARRLDMLNAAALNAMAANVYDFD FT DTHHPTIIHPTAPVAPALFALAETRPLSGAQLLHAFVLGVEATCRIGNAMSPGHYARGW FT HITSTCGVFGAALGAARCLGLPGDAMVAALGCAAVQAGGLVETLGTAAKSISVGNAARN FT GLLSALLAAEGFDGPPQPLEGVRGYLRVAADAPDIAAVSAGLGERWEVLNNTYKPYPCG FT VVLNPVIDACLALAADPRIAGGGWAAIERIELTGHPLLKQRTDRPGVATGRQSQVSAQH FT AVAVALVRGRAGLPEFSDEAVADAGLRALGLRLGFRDDASMSVDAVKVRIAFQDGTLLE FT REVQAARGSRERPLQDGEIEEKLRELCRHGGARVDADRLIEAVWTLDEAGDAAAVMRLA FT AEQPAA" FT misc_feature complement(99388..99432) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(100021..100071) FT /note="Signal peptide predicted for BPP3631 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.786) with cleavage site FT probability 0.529 between residues 17 and 18" FT CDS complement(100068..102170) FT /transl_table=11 FT /locus_tag="BPP3632" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0235" FT /db_xref="GOA:Q7W4M7" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q7W4M7" FT /protein_id="CAE38916.1" FT /translation="MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRAC FT GALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQ FT VELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWM FT PELAVSVGIVVFCMSILVDIYRLSPPAQAWRRWLTPTLLALLAAALVALGANAVPMAAG FT GRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVAS FT MMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGG FT LLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDM FT IERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACF FT MLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAA FT IGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVV FT NLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFL FT VLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMW FT LPQQVK" FT misc_feature complement(join(100089..100154,100218..100283, FT 100344..100409,100473..100526,100635..100700, FT 100764..100829,100875..100940,101004..101069, FT 101142..101207,101247..101312,101358..101423, FT 101439..101489,101502..101567,101607..101672, FT 101751..101816,101877..101942,101973..102038)) FT /note="17 probable transmembrane helices predicted for FT BPP3632 by TMHMM2.0 at aa 44-66, 76-98, 118-140, 166-188, FT 201-223, 227-244, 249-271, 286-308, 321-343, 367-389, FT 410-432, 447-469, 490-512, 548-566, 587-609, 629-651 and FT 672-694" FT CDS 102341..103381 FT /transl_table=11 FT /locus_tag="BPP3633" FT /product="putative solute-binding periplasmic protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0234" FT /db_xref="GOA:Q7W4M6" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q7W4M6" FT /protein_id="CAE38917.1" FT /translation="MSQRFPLPRGFQAALAAAALCTASWSGAAAQTYDLTMAVITSPGD FT GYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEP FT RMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIH FT KVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLE FT FWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVS FT NAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTL FT GKSASN" FT misc_feature 102341..102430 FT /note="Signal peptide predicted for BPP3633 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.711 between residues 30 and 31" FT misc_feature 102449..103306 FT /note="HMMPfam hit to PF03480, Bacterial extracellular FT solute-binding protein, family 7, score 2.2e-24" FT CDS 103425..104168 FT /transl_table=11 FT /locus_tag="BPP3634" FT /product="GntR family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0233" FT /db_xref="GOA:Q7W4M5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4M5" FT /protein_id="CAE38918.1" FT /translation="MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVG FT RFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIY FT QVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDG FT AGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSL FT HVRNAASVAIAILQDSLADAAATAE" FT misc_feature 103524..103700 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 1.2e-18" FT CDS complement(join(104185..105003,105003..105125)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP3635" FT /product="probable oxidoreductase (Pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP0232" FT /db_xref="PSEUDO:CAE38919.1" FT misc_feature complement(104533..104556) FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT CDS complement(105180..105590) FT /transl_table=11 FT /gene="pcaC" FT /locus_tag="BPP3636" FT /product="4-carboxymuconolactone decarboxylase" FT /EC_number="4.1.1.44" FT /note="ortholog of Bordetella pertussis (BX470248) BP0231" FT /db_xref="GOA:Q7W4M4" FT /db_xref="InterPro:IPR003779" FT /db_xref="UniProtKB/TrEMBL:Q7W4M4" FT /protein_id="CAE38920.1" FT /translation="MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKL FT VTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVL FT QAAIYCGVPAALDAMKAVREVVETMEKEGAFA" FT misc_feature complement(105219..105509) FT /note="HMMPfam hit to PF02627, Carboxymuconolactone FT decarboxylase, score 2.4e-28" FT CDS 105718..106545 FT /transl_table=11 FT /locus_tag="BPP3637" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0230" FT /db_xref="GOA:Q7W4M3" FT /db_xref="InterPro:IPR000209" FT /db_xref="UniProtKB/TrEMBL:Q7W4M3" FT /protein_id="CAE38921.1" FT /translation="MNCAPFDVYAIRYARHSGRIAADNYLGKVDFHDAESDLDYYVWAL FT RRGDEVYVVDTGFAEDAARQRGRELLMRPAQGLALIGIDATQVRDVILTHLHYDHAGTL FT GDFPAATFHVQDAEPAYATGHCMCHGPLRHPYDVEDVVGFVRKVYAGRVSFHNGQTELA FT PGLSLHLVGGHTGGLQIVRVWTQRGWVVLASDASHLYGNIGHDAPFPAVYHVGDMLEGY FT HTVRRLADSEAHIVPGHDPQVMQRYPAPSPELHGKVVRLDVAPTPDGLVPEAA" FT misc_feature 105820..106434 FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily, score 0.0015" FT misc_feature 105868..105900 FT /note="PS00136 Serine proteases, subtilase family, aspartic FT acid active site." FT CDS 106542..107342 FT /transl_table=11 FT /locus_tag="BPP3638" FT /product="beta-D-hydroxybutyrate dehydrogenase" FT /EC_number="1.1.1.30" FT /note="ortholog of Bordetella pertussis (BX470248) BP0229" FT /db_xref="GOA:Q7W4M2" FT /db_xref="HSSP:1Q7B" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W4M2" FT /protein_id="CAE38922.1" FT /translation="MNPARPLHGRCALITGAEAGLGLAIADTLARSGADIVMHCLQANE FT SARQAQAALAREHGVRVLLLQADLRDVDQIEAMAAQALAELPRLDILVNNAVVRHFEPA FT HELPRAHWDESLAVNLSAAFHLARLALPGMLAQGWGRIINLSSVYGAGAAANRVGYVTT FT KTALLGLTRALAVETAASGITCNAVAPGTAPTPAIVGRIAEIARRDGVAQEQAEREYLA FT AARQPTGRFVAMENVAALVAFLCSDAGRDITGATLPIDGGWTAA" FT misc_feature 106563..107330 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 1.7e-70" FT misc_feature 106980..107066 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 107395..108309 FT /transl_table=11 FT /locus_tag="BPP3639" FT /product="putative 2-hydroxy-3-oxopropionate reductase" FT /EC_number="1.1.1.60" FT /note="Similar to Salmonella typhi FT 2-hydroxy-3-oxopropionate reductase GarR or sty3430 FT SWALL:Q8Z3K1 (EMBL:AL627278) (294 aa) fasta scores: E(): FT 7.1e-26, 35.15% id in 293 aa, and to Escherichia coli FT 2-hydroxy-3-oxopropionate reductase GarR or b3125 FT SWALL:GARR_ECOLI (SWALL:P23523) (294 aa) fasta scores: E(): FT 2.8e-25, 35.15% id in 293 aa" FT /db_xref="GOA:Q7W4M1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W4M1" FT /protein_id="CAE38923.1" FT /translation="MTTEKHLGFVGIGRMGTPIAERLLEAGYTLTVYDTQAPALQALAA FT KGAHIADSPKAVADRAETVLVSLPTPDIVLAVALGEDGLARGNAVRTVIDLSTSGSQAA FT RTLADGLAAQNIASIDCPVSGGVTGAKRGTLALMVSGPRERYDALHDMFGVIGKPVYVG FT ERAGMAQTMKVINNLISVTALSITSELMVMGVKAGLDPDIMLQVINSGSGRTNASEDKI FT PRFVLTRSFDFGFAIGLSAKDVRLCLEESEQLGVPLRVGDAARRLLNDARDKFGNDADL FT TEIIRYVEDNAGVQVRGKAADAA" FT misc_feature 107404..107886 FT /note="HMMPfam hit to PF03446, NAD binding domain of FT 6-phosphogluconate dehydrogenase, score 0.0057" FT CDS 108306..109106 FT /transl_table=11 FT /locus_tag="BPP3640" FT /product="putative oxidoreductase" FT /note="Similar to Yersinia pestis putative short chain FT oxidoreductase ypo1287 SWALL:Q8ZGK4 (EMBL:AJ414147) (271 FT aa) fasta scores: E(): 7e-21, 38.21% id in 246 aa, and to FT Streptomyces sphaeroides NovJ novJ SWALL:Q9L9F8 FT (EMBL:AF170880) (262 aa) fasta scores: E(): 5.3e-20, 36.4% FT id in 250 aa" FT /db_xref="GOA:Q7W4M0" FT /db_xref="HSSP:1P33" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W4M0" FT /protein_id="CAE38924.1" FT /translation="MSTAGVAVITGGASGIGAACARRFAAQGMAVAILDVAREAGEALA FT AELGAQGAPARFYACDVADAAAVQACADAVSAELGETALLVTSAALIPNTESVLDMDLA FT EHDRMWRVNYHGTVHACRSFGRILRARRAGHIVTLGSINSRNALPLPAYNPGKAALARL FT TELLAQELGRHGVRVNSVAPTYVMTPALQARIDAGQRDLAAMMSVHALDALPTPADIAD FT AVAFLCSPQARLITGVLLPVDAGWASGVSYRTYAGGMPPQSHGA" FT misc_feature 108306..108380 FT /note="Signal peptide predicted for BPP3640 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.821) with cleavage site FT probability 0.464 between residues 25 and 26" FT misc_feature 108312..109043 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 1.7e-51" FT CDS 109141..110127 FT /transl_table=11 FT /locus_tag="BPP3641" FT /product="putative exported protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 FT aa) fasta scores: E(): 1.3e-45, 42.37% id in 328 aa, and to FT Variovorax paradoxus, and 2,4-diphenoxyacetic acid gene FT cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: FT E(): 2.5e-41, 40.12% id in 314 aa" FT /db_xref="GOA:Q7W4L9" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W4L9" FT /protein_id="CAE38925.1" FT /translation="MSGSFLKALRRAPLLALCLALLPAAAARAAYPERPVRVIVPFAAG FT GGADIVARLVFKGVSEQLGQPFIIDNRGGAGGIIGTDAVAKAEADGYTLLLGQSGPNAI FT NPSVYSKLPYDARKDFAPVTQLTSYPYVVAIKNGLAPNNLRELIELAKREPGTLTLSTA FT GQGSSAHLAVELFMRQAGIVVIPVPYKGAGPALLDVVGGVVDMTFGDAASASKQAQAGK FT IKALAVTGARRSPLIPDVPTVQEAGVPGYEASAWHAVLAPRGTPQPVIQTLYTAIAKVL FT ADPQLKARLAQDGIEAVGSEPQAFGQALNAEIDKWQKVVEDAGIKLE" FT misc_feature 109141..109227 FT /note="Signal peptide predicted for BPP3641 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.683 between residues 29 and 30" FT misc_feature 109291..110115 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 7.7e-110" FT CDS complement(110161..111075) FT /transl_table=11 FT /locus_tag="BPP3642" FT /product="putative sugar kinase" FT /note="Similar to many eg. Escherichia coli hypothetical FT sugar kinase YihV or b3883 SWALL:YIHV_ECOLI (SWALL:P32143) FT (298 aa) fasta scores: E(): 2.1e-11, 33.44% id in 296 aa, FT and to Escherichia coli, and ribokinase RbsK or b3752 or FT z5253 or ecs4694 SWALL:RBSK_ECOLI (SWALL:P05054) (309 aa) FT fasta scores: E(): 7.6e-05, 24.11% id in 311 aa" FT /db_xref="GOA:Q7W4L8" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q7W4L8" FT /protein_id="CAE38926.1" FT /translation="MAAPGPAPAALFVGHAYIDVTLLADEWPGGDDKRVARDYAVSFGG FT NAVTAAFACARLGLAPDLICPQAPDWLGHMFADMAASHGVRVHPRPVRRSSLSFIMPRD FT GKRAILRARDTDYLQSFPLLEVGGYRVLHLDGHQPDAALHYARACRAAGVLTSLDGGGL FT RSNTAELMRHIDVAVCAERLCEQMGLSAEALLEWLRDCGCRIGAVTQGERGMLWYDEAG FT VVSRLPALDIPASAVVDTSGAGDVFHGAYVWSYAARPQLPWREHFRFARAAAAYKIQHL FT GNEAGLPGQDDVAAVMARWPEKA" FT misc_feature complement(110206..111057) FT /note="HMMPfam hit to PF00294, pfkB family carbohydrate FT kinase, score 6.6e-19" FT misc_feature complement(110320..110361) FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2." FT CDS complement(111079..111918) FT /transl_table=11 FT /locus_tag="BPP3643" FT /product="putative citrate lyase beta subunit" FT /EC_number="4.1.3.6" FT /note="Similar to Pseudomonas aeruginosa probable acyl-CoA FT lyase beta chain pa0883 SWALL:Q9I562 (EMBL:AE004522) (275 FT aa) fasta scores: E(): 6.3e-54, 59.48% id in 274 aa, and to FT Homo sapiens citrate lyase beta subunit Clb SWALL:AAL84703 FT (EMBL:AF428253) (340 aa) fasta scores: E(): 3.8e-09, 28.81% FT id in 295 aa, and to Leuconostoc mesenteroides citrate FT lyase beta chain CitE SWALL:CILB_LEUMC (SWALL:O53078) (302 FT aa) fasta scores: E(): 0.00016, 32.86% id in 286 aa" FT /db_xref="GOA:Q7W4L7" FT /db_xref="InterPro:IPR005000" FT /db_xref="UniProtKB/TrEMBL:Q7W4L7" FT /protein_id="CAE38927.1" FT /translation="MMQTVVRTALFVPASRPERIPKALASGADAVIVDLEDAVEHLAKD FT SAREALCDFLGTHPDARLWVRINDASTAWHDDDLKACRGRPGVRGILLPKAESLMQVRH FT AAQSGIPIVPIIETARGVLNAADVAGTPGVARLAFGSLDYALDLGLTPDTEAAGVALDQ FT ARVQVLLHSRAAGLAQPLDGVHPGVQDTAGLRAAATRARDMGFAGMLCIHPTQVPIVHE FT ALLPPLAELDWARRVVAAHRDSGAGTFMLDGKMVDAPVIARARQLLARAGEPAGQEA" FT CDS complement(111915..113111) FT /transl_table=11 FT /locus_tag="BPP3644" FT /product="putative CAIB/BAIF-family enzyme" FT /note="Similar to Pseudomonas aeruginosa hypothetical FT protein Pa0882 SWALL:Q9I563 (EMBL:AE004522) (400 aa) fasta FT scores: E(): 5e-115, 76.33% id in 393 aa, and to FT Streptomyces coelicolor putative dehydratase SCE66.09 FT SWALL:Q9K3T4 (EMBL:AL359989) (391 aa) fasta scores: E(): FT 2.2e-91, 61.99% id in 392 aa" FT /db_xref="GOA:Q7W4L6" FT /db_xref="HSSP:1PQY" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7W4L6" FT /protein_id="CAE38928.1" FT /translation="MSDVPAIRPLDGITVVSLEHAIAAPFCTRQLADMGARVIKIERPG FT SGDFARGYDERVRGLSSHFVWTNRSKESLTLDLKRPGADEVLERLLASADVLAQNLAPG FT AAARLGLSFEQLHARFSRLIVCDISGYGQGGPYQDKKAYDLLIQSESGFVSVTGTPDEP FT VKAGCSISDIAAGMYAYSGILNALLLRGKTGVGSRIDVSMLESTVEWMGYPMYYAFDDA FT PPPPRAGAAHATIYPYGPFPVGDGATIMLGLQNEREWRAFCERVLRQPELADDERYASN FT SRRAANRDALRALIVAVFARLDIGEVTARLEQAQIANARVNQMRDVWEHPQLQARQRWR FT EVDSPAGTLPALLPPATSNAFAARMDAVPAVGENTAAVLASLGYAPDEVARLRAAEVV" FT misc_feature complement(112326..112892) FT /note="HMMPfam hit to PF02515, CAIB/BAIF family, score FT 1.1e-50" FT misc_feature complement(112533..112556) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(113108..113938) FT /transl_table=11 FT /locus_tag="BPP3645" FT /product="conserved hypothetical protein" FT /note="Although not ubiquitous, this protein is conserved FT in prokaryotic and eukaryotic genomes. Similar to FT Pseudomonas aeruginosa hypothetical protein Pa0878 FT SWALL:Q9I567 (EMBL:AE004522) (275 aa) fasta scores: E(): FT 5.4e-68, 62.77% id in 274 aa, and to Schizosaccharomyces FT pombe hypothetical 34.7 kDa protein spbc1105.15C FT SWALL:Q9Y814 (EMBL:AL096851) (300 aa) fasta scores: E(): FT 8.8e-09, 27.5% id in 280 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W4L5" FT /protein_id="CAE38929.1" FT /translation="MTATSLAAWIGSSECVQDSLDPIAVGRVAATLGEPAPGAGQPLPP FT LWQWAFFISTVGPDGLGRDGHPARGGFLPPADDRNRMWAGGRVEFRQPLRVGVPAERLS FT TVASIQEKTGRTGALLFVTVRHEYRQEGELAILEEQDIVYRQPSPPKLAGTEPAPAAQW FT RETMTPSEVLLFRYSAVTFNGHRIHYDYPYVTGVEGYPGLVVHGPMIATMMVAAFRRAH FT PGARLDHLSYRGLRPLIAPRPFEVAGAVAEPGLARLWAQQDDTLAHQGELRFTA" FT CDS complement(114181..115704) FT /transl_table=11 FT /locus_tag="BPP3646" FT /product="putative fumarate hydratase" FT /note="Similar to Ralstonia solanacearum probable fumarate FT hydratase protein fuma or rsc1955 or rs03529 SWALL:Q8XY08 FT (EMBL:AL646067) (507 aa) fasta scores: E(): 1.3e-160, FT 78.34% id in 508 aa, and to Escherichia coli fumarate FT hydratase class i, aerobic fuma or b1612 SWALL:FUMA_ECOLI FT (SWALL:P00923) (547 aa) fasta scores: E(): 2.4e-28, 32.46% FT id in 462 aa" FT /db_xref="GOA:Q7W4L4" FT /db_xref="InterPro:IPR004647" FT /db_xref="UniProtKB/TrEMBL:Q7W4L4" FT /protein_id="CAE38930.1" FT /translation="MTVLIKEEDFIQSIADGIQFISYYHPVDYIRHLARAYEREESPAA FT RDAMAQILTNSRMCAEGKRPLCQDTGIVNVFLKVGMNVRFDTQRTLQELCDEGVRRGYL FT NPDNPLRASVLDDPLFARKNTRDNTPCILHVELVPGDTVDVQVASKGGGSENKSKFVML FT NPSDSLVDWVLKTVPTMGAGWCPPGMLGIGVGGTAEKAMLMAKQSLMEDIDMYELLARG FT PQSKLEELRIELYEKVNALGIGAQGLGGLTTVLDVKISTFPTHAASKPVAMIPNCAATR FT HAHFVLDGSGPARLDPPSLSEWPEVHWAPDYNKSRQVDLDTLTKEEVASWKPGQTLLLS FT GKMLTGRDAAHKRIQDMLSKGESLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMD FT KFTDMMLAQTGLISMIGKSERGPVAIESIRKHGSAYLMAVGGAAYLVSKAIRNAKVLAF FT EDLGMEAIYEFDVKDMPVTVAVDSQGTSVHTTGPKEWQARIGKIPVAVA" FT CDS complement(115773..116540) FT /transl_table=11 FT /locus_tag="BPP3647" FT /product="carnitinyl-CoA dehydratase" FT /EC_number="4.2.1.-" FT /note="Similar to Rhodococcus fascians enoyl CoA hydratase FT EchA1 SWALL:Q9ZHG2 (EMBL:AF063588) (275 aa) fasta scores: FT E(): 8.4e-55, 60.78% id in 255 aa" FT /db_xref="GOA:Q7W4L3" FT /db_xref="HSSP:1HZD" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q7W4L3" FT /protein_id="CAE38931.1" FT /translation="MSELVKVEIADGIQIITVNRPEARNAINFETAQAMAAALDQLDER FT DDVRIGILTGAGGTFSAGMDLKAFARTGQRPSLPERGFAALTERPPKKPLIAAVEGYAL FT AGGCEMALSCDLLVAADNAKFGLPEVKRGLVPGAGGMLRLPRRLPYHIAMEIILTGDFL FT DASRAHALGLVNRLTAAGGALEGALALARVIVENGPLAVQVAKSIVAQSGDWDQETMFD FT RQRPQVTEIFTSADAKEGATAFAEKRKPVWQGK" FT misc_feature complement(116004..116501) FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family, score 1.3e-46" FT misc_feature complement(116193..116255) FT /note="PS00166 Enoyl-CoA hydratase/isomerase signature." FT CDS 116723..117688 FT /transl_table=11 FT /locus_tag="BPP3648" FT /product="conserved hypothetical secreted protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT Ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) FT fasta scores: E(): 2.2e-40, 41.87% id in 320 aa" FT /db_xref="GOA:Q7W4L2" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W4L2" FT /protein_id="CAE38932.1" FT /translation="MQGLQRLAAGCALFGALALPLAPASAQNNAIKLVVGAPPGGTTDT FT VARSIAQHMAQDLKRTVLVENKPGAGGNIAADYVAKGKADGSTLLVTFTSFSINASLYR FT NLPFDPVRDFTPISMLANVPSVLVTRKDFPARTMPEFVSLVQASPGKYTMALGAIGSSL FT HMSGERMKMMAGLDILNVPYKGTSPAITDLLGGQVDMMVASSLNALPHIKSGALKALGV FT TSPQPLPQFPGVPPIGDTIKGFESNAWFALFGPAGLPPETVAALNAAARKAVDTPEFRK FT LLEGEAATAVSSSPQELDEFVRKDIERYAELVKFTGATVD" FT misc_feature 116723..116800 FT /note="Signal peptide predicted for BPP3648 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.938 between residues 26 and 27" FT misc_feature 116858..117676 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 5.5e-106" FT CDS 117710..118489 FT /transl_table=11 FT /locus_tag="BPP3649" FT /product="putative GntR-family transcriptional regulator" FT /note="Similar to Ralstonia solanacearum putative FT DNA-binding transcriptional regulatory transcription FT regulator protein rsp0079 or rs05542 SWALL:Q8XTM7 FT (EMBL:AL646076) (273 aa) fasta scores: E(): 5.6e-30, 38.76% FT id in 258 aa" FT /db_xref="GOA:Q7W4L1" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4L1" FT /protein_id="CAE38933.1" FT /translation="MPDSPLPLYHKVYLLLKQRLQSGGFALNAAMPGENALAAEYGVSR FT LTIRRSLEALESEGLIERRQGRGTFAAEGAILSAPQHSADIDTLMAHLARMGMHTQVNL FT LELDTVPATPQVAAQLELPAGAPVQRAVRVRSHQGLPFSYLVTYVPGEIGQRIRREDLG FT AKPLLAIFRDLGVRVARAQQSISAVLAEPGTAGALDVPVGSALLSLQRLVRDDAGRPVE FT WLHALYRPDRYEYRLDMQAHDTPGQPTWLPAGAPRRA" FT misc_feature 117743..117922 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 3.9e-19" FT CDS 118512..119774 FT /transl_table=11 FT /locus_tag="BPP3650" FT /product="putative 3-isopropylmalate dehydratase large FT subunit" FT /EC_number="4.2.1.33" FT /note="Interestingly more similar to proteins from FT extremophiles. Similar to Methanobacterium FT thermoautotrophicum putative 3-isopropylmalate dehydratase FT large subunit mth1386 SWALL:LE21_METTH (SWALL:O27439) (419 FT aa) fasta scores: E(): 8.4e-58, 42.58% id in 418 aa, and to FT Escherichia coli 3-isopropylmalate dehydratase large FT subunit LeuC or b0072 SWALL:LEU2_ECOLI (SWALL:P30127) (465 FT aa) fasta scores: E(): 1.5e-19, 34.46% id in 470 aa" FT /db_xref="GOA:Q7W4L0" FT /db_xref="InterPro:IPR015937" FT /db_xref="UniProtKB/TrEMBL:Q7W4L0" FT /protein_id="CAE38934.1" FT /translation="MPAQTLAQKLLAAAAGRDAVRVGEIVTCKVDLAMFHDSSGPRRLQ FT PMLEELGTGLWDRSRIVLVMDHYVPESDDESRRIVRIARDWAREQALPHVYDSLGICHV FT VVPEHGHVRPGMFCVGGDSHSPTGGAFGAYMFGVGSTEMLGVVSSGEIWMRVPDTLMMH FT WRGRLRPGVMAKDMMLHMIGLHGMNGGRYQAVEFCGEAVRALSMQERMTLSNMSAELGA FT QAGLIAPDRTTAQYLRQAGAPEPDTARWQSDPDAPAQWHEYDADSLPPYVAAPHSPANA FT APVQAYADTAVQVAYIGACTGAKLDDLRAAAQVLRGRRVAPGVSLLVAPASQRDQARAQ FT DEGVLPALVEAGATVLPTTCGACSGYGGSIPDGANVISTTARNFKGRMGAASARVYLAS FT PYTVAASALAGRIADPREVLS" FT misc_feature 118524..119741 FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase), score 1.1e-54" FT CDS 119771..120286 FT /transl_table=11 FT /locus_tag="BPP3651" FT /product="putative 3-isopropylmalate dehydratase small FT subunit" FT /EC_number="4.2.1.33" FT /note="Interestingly more similar to proteins from FT extremophiles. Similar to Pyrococcus horikoshii putative FT 3-isopropylmalate dehydratase small subunit ph1724 FT SWALL:LEUD_PYRHO (SWALL:O59393) (163 aa) fasta scores: E(): FT 1.2e-20, 43.39% id in 159 aa, and to Azotobacter vinelandii FT 3-isopropylmalate dehydratase small subunit LeuD FT SWALL:LEUD_AZOVI (SWALL:P96196) (215 aa) fasta scores: E(): FT 4.8e-07, 35.44% id in 158 aa" FT /db_xref="GOA:Q7W4K9" FT /db_xref="InterPro:IPR015937" FT /db_xref="UniProtKB/TrEMBL:Q7W4K9" FT /protein_id="CAE38935.1" FT /translation="MSETHQAWRVGDDVDTDQLAPGAYMKLGIADIARHCLEGVRPDFA FT GGVRPGDVLVAGRNFGIGSSREQAAAALVQLGLRAVIAPSYSGLYFRNAFNVGLLLLTC FT DRAGEIAEGERIRIDLPNQRVLRADGMPLPCEPVPAFLLDMVQAGGLLMQLKRRLTDGS FT LPRYPMKA" FT misc_feature 119777..120205 FT /note="HMMPfam hit to PF00694, Aconitase C-terminal domain, FT score 9.6e-07" FT CDS 120286..121149 FT /transl_table=11 FT /locus_tag="BPP3652" FT /product="putative isocitrate lyase-family enzyme" FT /note="Similar to Streptomyces hygroscopicus FT carboxyvinyl-carboxyphosphonate phosphorylmutase bcpA FT SWALL:CPPM_STRHY (SWALL:P11435) (294 aa) fasta scores: E(): FT 1.3e-33, 41.63% id in 257 aa" FT /db_xref="GOA:Q7W4K8" FT /db_xref="HSSP:1UJQ" FT /db_xref="InterPro:IPR018523" FT /db_xref="UniProtKB/TrEMBL:Q7W4K8" FT /protein_id="CAE38936.1" FT /translation="MTPASLKHKLAAGQTLLAPGVYDALSALIAEQAGFDAVYLSGASI FT AYTRLGRSDVGLTTYSEVEDVLARITERVRCPVIVDADTGFGNALNVQRTVRGFERAGA FT AMIQLEDQDFPKRCGHLAGKSLVPADEMCGKLRAALDARASDGTLILARTDAVAVEGID FT AAFERAERYLECGVDALFIEALRSPQQLDAACARFAARVPLLANMVEGGQTPVESAQAL FT AERGFRIVIFPGGTARAVSHALQDYYGSLREHGTTAPWRARMLDFDQLNALIGTPALLE FT TAERYR" FT misc_feature 120631..120648 FT /note="PS00161 Isocitrate lyase signature." FT CDS complement(121146..122336) FT /transl_table=11 FT /locus_tag="BPP3653" FT /product="probable transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP0032" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:Q7W4K7" FT /protein_id="CAE38937.1" FT /translation="MSDHDASFNLKDIAVPAFGPSILYGVSNGAILPVVALTARELGAS FT LATSGLIVGLVGIGSLVSNIPATMFTSRHGERRSMVGAAALSVVALLLCIFAGTLWMLA FT TGVFMVGMASSVFLLARQGYMIDAVPAYMRARALSTLAGTMRIGVFAGPFAGAALIHFM FT GLQGAYWVAAVAMTGAGLIAWFAPDMAPPRRRGEAAVARPRLLDVARAHRQVYLTLGLG FT ILLVSAVRASRQVVIPLWADHLGVNPATTSLIYGLVAAIDMSVFYPAGMLMDRRGRLWV FT AVPSTLLMGCALIGTSLTSGVAGFVIVAMMLGMGNGIGSGIVMTLGADAAPASGRTEFL FT GLWRLMSDLGGSLGPVALSGITALVSLAAGVAAMGGVGLAAAAVFWHWLPRGQAPR" FT misc_feature complement(join(121170..121235,121251..121316, FT 121356..121421,121434..121499,121521..121586, FT 121626..121691,121779..121844,121857..121922, FT 121962..122018,122031..122096,122136..122201, FT 122232..122297)) FT /note="12 probable transmembrane helices predicted for FT BPP3653 by TMHMM2.0 at aa 13-35, 45-67, 80-102, 106-125, FT 138-160, 164-186, 215-237, 250-272, 279-301, 305-327, FT 340-362 and 367-389" FT misc_feature complement(121173..122303) FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter, score 0.0015" FT misc_feature complement(121299..121334) FT /note="PS00213 Lipocalin signature." FT misc_feature complement(121329..121409) FT /note="PS01125 ROK family signature." FT CDS 122563..123537 FT /transl_table=11 FT /gene="glyQ" FT /gene_synonym="glyS(a)" FT /locus_tag="BPP3654" FT /product="glycyl-tRNA synthetase alpha chain" FT /EC_number="6.1.1.14" FT /note="ortholog of Bordetella pertussis (BX470248) BP0033" FT /db_xref="GOA:Q7W4K6" FT /db_xref="HSSP:1J5W" FT /db_xref="InterPro:IPR006194" FT /db_xref="UniProtKB/TrEMBL:Q7W4K6" FT /protein_id="CAE38938.1" FT /translation="MAGFPRCRLARGLPRPDFLTPMLTFQQIILTLQDYWDKQGCALLQ FT PYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQVVLK FT PAPPEILDLYIGSLKALGIDPTQHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTY FT FQQVGGLDCTPTTGEITYGLERLAMYLQDVESVYDLVWTEGANGNRVYYRDVFHQNEVE FT QSTYNFEHASADMLFAHFNDYEAEAKRLMDVPLALPAYEAALKAAHTFNMLDARGAISV FT TERTAYIGRIRNLSRAVAQAYYDSRERLGFPMLAGRKAAGEAA" FT misc_feature 122635..123501 FT /note="HMMPfam hit to PF02091, Glycyl-tRNA synthetase alpha FT subunit, score 2.8e-229" FT misc_feature 123100..123129 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT CDS 123539..125677 FT /transl_table=11 FT /gene="glyS" FT /gene_synonym="glyS(b)" FT /locus_tag="BPP3655" FT /product="glycyl-tRNA synthetase beta chain" FT /EC_number="6.1.1.14" FT /note="ortholog of Bordetella pertussis (BX470248) BP0034" FT /db_xref="GOA:Q7W4K5" FT /db_xref="InterPro:IPR008909" FT /db_xref="UniProtKB/TrEMBL:Q7W4K5" FT /protein_id="CAE38939.1" FT /translation="MTTDIRPLLVELFTEELPPKALQKLGQAFAEGVRATLARHHLLAD FT GCAVEPFATPRRLAVRLSAVLAQAPEQAYAEKLMPVKVGLDANGQPTAALAKKLAAKGL FT EGLDPATLERESDGKQEYLVARGTAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQ FT TTVKFVRPAHGLVALFGADIVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAE FT RGRVIASFEARRAEISRLLDEHAQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEE FT QFLQVPQECLILTMRLNQKYFPLFDPASGKLTHRFLIVSNMQVADPANIVEGNQRVVRP FT RLADAQFFFETDRKTPLAARVEQLGSIVYHNKLSTQLERVERVRAIARGIATALGGDAA FT HCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNRYDAPVD FT AATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKV FT SEDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYERYRNQLIGEHDRNAVEAVIAL FT APPLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLLKKAEGEIGAVDAALVQDPAEKA FT LAEAVAQLRPQARAQLQAGDFAASLATLAQAREPVDAFFADVMVMADDAALRANRLALL FT GQLHGLMNQVADISRLAQ" FT misc_feature 123560..125278 FT /note="HMMPfam hit to PF02092, Glycyl-tRNA synthetase beta FT subunit, score 5.3e-136" FT CDS 125674..126213 FT /transl_table=11 FT /locus_tag="BPP3656" FT /product="putative haloacid dehalogenase-like hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0035" FT /db_xref="GOA:Q7W4K4" FT /db_xref="InterPro:IPR006543" FT /db_xref="UniProtKB/TrEMBL:Q7W4K4" FT /protein_id="CAE38940.1" FT /translation="MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWT FT VVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLP FT GMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPESTR FT VCEDLAAVAEQLLQEA" FT misc_feature 125674..126114 FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase, score 0.046" FT CDS 126217..126945 FT /transl_table=11 FT /locus_tag="BPP3657" FT /product="probable acyltransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0036" FT /db_xref="GOA:Q7W4K3" FT /db_xref="InterPro:IPR002123" FT /db_xref="UniProtKB/TrEMBL:Q7W4K3" FT /protein_id="CAE38941.1" FT /translation="MAWLRSALYALFLIVTVIPYAFACILWAPLPLHWRYRLTVGWPRL FT AIWGARVICGIRWRIKGAENLPDGPAILLSKHQSAWETLFFPAHMPREVCFVYKKELHM FT VPFFGWGLALLRMIPIDRAKGRDAFEQVVRQGQVRLDEGRWPLLFPEGTRVPPGKTGRF FT KMGGALLASRTGARIIPVAHNAGECWRRNAFVKRPGLITVSIGPAIESQDVAPEVLNGK FT VQAWIEGEMRVLNPERYGQA" FT misc_feature 126217..126285 FT /note="Signal peptide predicted for BPP3657 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.995 between residues 23 and 24" FT misc_feature 126235..126303 FT /note="1 probable transmembrane helix predicted for BPP3657 FT by TMHMM2.0 at aa 7-29" FT misc_feature 126403..126930 FT /note="HMMPfam hit to PF01553, Acyltransferase, score FT 1.5e-23" FT CDS 126932..127840 FT /transl_table=11 FT /locus_tag="BPP3658" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0037" FT /db_xref="InterPro:IPR002725" FT /db_xref="UniProtKB/TrEMBL:Q7W4K2" FT /protein_id="CAE38942.1" FT /translation="MAKPDQLELLFDVAPPADPASAAPPGAPPRKTPKARPAPPAPAAI FT ATPCPDPLPPGARWREVHTEQQPIGFVLLRSRRRSIGFVVADDGLRVTAPNWVTLGQID FT DAVREKARWILAKLRDWHARKEQLAMAHTRWQAGGELPYLGKRIVLGLGAERRQACLSG FT DADAPCDGDTLWLALPVDADQARIRDAAQAWLQQRAGAWFGARLAHFLQLTGLRIRRWR FT LSSAATRWGSCTSDGNIMLNWRLIHFAPTIIDYVIAHELAHLREMNHSQDFWTEVGHIL FT PGFEDAKNVLRRHDPATLPQF" FT misc_feature 127139..127822 FT /note="HMMPfam hit to PF01863, Protein of unknown function FT DUF45, score 3.8e-07" FT CDS 127911..128306 FT /transl_table=11 FT /gene="gloA" FT /locus_tag="BPP3659" FT /product="lactoylglutathione lyase" FT /EC_number="4.4.1.5" FT /note="ortholog of Bordetella pertussis (BX470248) BP0038" FT /db_xref="GOA:Q7W4K1" FT /db_xref="HSSP:1F9Z" FT /db_xref="InterPro:IPR018146" FT /db_xref="UniProtKB/TrEMBL:Q7W4K1" FT /protein_id="CAE38943.1" FT /translation="MRLLHTMLRVGNLDKSIDFYTSVLGMRELRRKDYPDGRFTLAFVG FT YQDESEAAAIELTHNWDTEKYDLGTGYGHIAIEVDNAYEACDKVKEKGGKVTREAGPMK FT HGTTVIAFVEDPDGYKIEFIQKKGRND" FT misc_feature 127923..127988 FT /note="PS00934 Glyoxalase I signature 1." FT misc_feature 127935..128300 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00903, Glyoxalase/Bleomycin FT resistance protein/Dioxygenase superfamily, score 4.6e-40" FT misc_feature 128115..128153 FT /note="PS00935 Glyoxalase I signature 2." FT CDS 128316..128846 FT /transl_table=11 FT /locus_tag="BPP3660" FT /product="peptide deformylase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0039" FT /db_xref="GOA:Q7W4K0" FT /db_xref="InterPro:IPR000181" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4K0" FT /protein_id="CAE38944.1" FT /translation="MIHAILKMGDPRLLRVAAPVERYDTPELRALIDDMFETMAHAQGV FT GLAAPQIGVDLQLVIFGFERNDRYPDAPAVPRTILCNPVIEPLSDEMEDGWEGCLSVPG FT LRGLVPRYRHIRYSGYDPAGQRIEREAEGFHARVVQHECDHLIGRLYPTRIRDLTKFGY FT TEVLFPEMDPNAD" FT misc_feature 128316..128810 FT /note="HMMPfam hit to PF01327, Polypeptide deformylase, FT score 1.6e-44" FT CDS complement(128975..131122) FT /transl_table=11 FT /locus_tag="BPP3661" FT /product="putative oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) FT BP3335+BP0040" FT /db_xref="GOA:Q7W4J9" FT /db_xref="InterPro:IPR006092" FT /db_xref="UniProtKB/TrEMBL:Q7W4J9" FT /protein_id="CAE38945.1" FT /translation="MPGMSDTEREAIEAGDVWWDADLFTGNPDWRKLLDVPPAELTAAE FT QRFIDGPVAQLCAMLDEWDITWSRRDLPEPVWQFMKSQRFFGMIIPEQYGGLGFSPYAH FT SEVVRRISAYSITAGVTVMVPNSLGPGELLLQFGTPEQREFWLPRLADGTEVPCFGLTS FT PEAGSDAASMTDTGVVCRQVVDGREMLGIRLNWHKRYITLGPVATVLGLAFKLSDPEGL FT LGGPADIGISVALVPTEAPGVEIGRRHLPAMQVFQNGPNRGRDVFVPIEALIGGPARAG FT QGWQMLMSALAAGRGISLPSLSAAAAVVSARATGMYARIRRQFGIPVGQFEGVQEKLAR FT LAGNAYLVEAARRLTCAALNQGHKPAVISAIMKYHATERMRESVDDAMDVHAGKAVIDG FT PSNYLGNLYRAVPIAITVEGANILTRCLIVFGQGAIRAHPYLMGEVLALGDQDTQRGLE FT AFHGLFWKHLGHAGANTLRAWGRAWTGGLLARAPVSGPTAIHYRQLSRYAAAFALLADV FT ALGALGGALKRREMISARLGDILSELYLLSAVLKRWEDEGRCHGDLALVRWCMEDGRHR FT IETRIDQVLSNLPNRPLAWLVRALILPVRLARGPSDALTRECAALLLSPSRTHDRLAAD FT LQRDGDDPLGRLERAFALVTAVQPLLDRLRREGVPDWRDALRGGALTPEQAAEIEAAEA FT AVAGVLAVDDFAPQELTGRGR" FT misc_feature complement(129839..130282) FT /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, FT C-terminal domain, score 4.2e-28" FT misc_feature complement(130649..130990) FT /note="HMMPfam hit to PF02771, Acyl-CoA dehydrogenase, FT N-terminal domain, score 0.0004" FT CDS 131331..132560 FT /transl_table=11 FT /locus_tag="BPP3662" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3334" FT /db_xref="GOA:Q7W4J8" FT /db_xref="InterPro:IPR011415" FT /db_xref="UniProtKB/TrEMBL:Q7W4J8" FT /protein_id="CAE38946.1" FT /translation="MLNKLWLAFFLTAAAAALYRWLGLGEPDVFQAMVVSLFDMARVSV FT EVMVLLFGTLTLWLGFLRIAEAAGLVERLASLLGPLFARLMPEVPRGHPAIGLITLNFA FT ANGLGLDNAATPIGLRAMRELQSLNPNPDTASNAQILFLVLNASSLTLLPVTLFMFRAQ FT QGAADPTLIFLPILLATSASTLAGLLAVAFCQRLRLHDPVVLAWLGSAALALGAFMVML FT AGMSAAAIAALSSLLGNLTLFAVLLAFLVAGAWKKVPVYETFIAGAKDGFNIARDLLPY FT LVAMLCAIGVLRASGALDFALDGMRWLAHAAGWDTRFVDALPTALVKPFSGSAARAMML FT ETMSHFGVDSFPALLAAVMQGSTETTFYVLAVYFGSVGIVRARHAVGCALAADLAGVLA FT SIGVCYWFFG" FT misc_feature 131331..131378 FT /note="Signal peptide predicted for BPP3662 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.990) with cleavage site FT probability 0.522 between residues 16 and 17" FT misc_feature join(131343..131399,131457..131525,131748..131816, FT 131844..131912,131937..132005,132015..132083, FT 132162..132221,132399..132467,132486..132554) FT /note="9 probable transmembrane helices predicted for FT BPP3662 by TMHMM2.0 at aa 5-23, 43-65, 140-162, 172-194, FT 203-225, 229-251, 278-297, 357-379 and 386-408" FT CDS complement(132563..134005) FT /transl_table=11 FT /gene="pykA" FT /locus_tag="BPP3663" FT /product="pyruvate kinase" FT /EC_number="2.7.1.40" FT /note="ortholog of Bordetella pertussis (BX470248) BP3333" FT /db_xref="GOA:Q7W4J7" FT /db_xref="HSSP:1E0T" FT /db_xref="InterPro:IPR018209" FT /db_xref="UniProtKB/TrEMBL:Q7W4J7" FT /protein_id="CAE38947.1" FT /translation="MPVLRRTKIVATLGPATSTPERLDGLIRAGMDVARLNFSHGSAQD FT HRERVRLVRELAAEQGRFVALMGDLQGPKIRIARFTDQQVTLQAGQPFTLSRSHSKEAG FT DATIVGIDYPELVQDCRPGDELLLDDGRVVLVVDSVGAEEVHTTVTVGGPLSNNKGINR FT RGGGLSAPSLTDKDRTDIKLAAEMELDYVAVSFPRYGADIDEARALLRAAGSQAWIIAK FT IERAEAVADDDALDALIRASDGVMVARGDLGVEVGDAELVGIQKRIIQHARTLNKVVIT FT ATQMMESMVASPMPTRAEVSDVANAVLDYTDAVMLSAESASGQYPIEAVAAMARVCLGA FT EKHPTTTHSHHRLGETFTRCDETIALAAMYAANHFPGVKAIIALTESGHTPLIMSRIRS FT GVPIYCYSPHGPTQRRAALFRGVYTVPFAPAEYDPADLSNAAIDELKKRGRVAAGDWVI FT LTKGDFYRDSGGTNGLKILKVE" FT misc_feature complement(132572..132925) FT /note="HMMPfam hit to PF02887, Pyruvate kinase, alpha/beta FT domain, score 4e-24" FT misc_feature complement(132956..134005) FT /note="HMMPfam hit to PF00224, Pyruvate kinase, barrel FT domain, score 8.3e-165" FT misc_feature complement(133319..133357) FT /note="PS00110 Pyruvate kinase active site signature." FT CDS join(134110..134565,134569..135255) FT /pseudo FT /transl_table=11 FT /gene="garK" FT /locus_tag="BPP3664" FT /product="glycerate kinase (pseudogene)" FT /EC_number="2.7.1.31" FT /note="ortholog of Bordetella pertussis (BX470248) BP3332" FT /db_xref="PSEUDO:CAE38948.1" FT misc_feature join(134110..134565,134569..135243) FT /note="HMMPfam hit to PF02595, Uncharacterized BCR, FT COG1929, score 3e-172" FT misc_feature 134998..135021 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(135287..136084) FT /transl_table=11 FT /gene="ksgA" FT /gene_synonym="rsmA" FT /locus_tag="BPP3665" FT /product="dimethyladenosine transferase" FT /EC_number="2.1.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3331" FT /db_xref="GOA:Q7W4J6" FT /db_xref="InterPro:IPR011530" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4J6" FT /protein_id="CAE38949.1" FT /translation="MSAHQARKRFGQHFLTDESVVESIVRAIGPARDDRVVEIGPGLSA FT LTRPLLDRIDHLTAVEIDRDLAARLRRQYPAERLTVVEADALTVDFAQFGQGLRVVGNL FT PYNISSPLLFHLMGAAEQVRDQHFMLQREVIDRMVAEPGSGDYSRLSVMLQARYRMEML FT FDVAPEAFDPPPRVVSAVVRMAPLPADRLRPASDAAFETVVARAFSQRRKMLRRVLGDW FT AALTPWDELGIAPTARAEEVGVAQFIGLADALLAAGAPGLARP" FT misc_feature complement(135329..136051) FT /note="HMMPfam hit to PF00398, Ribosomal RNA adenine FT dimethylase, score 5.5e-63" FT CDS complement(136109..137668) FT /transl_table=11 FT /locus_tag="BPP3666" FT /product="putative peptidyl-prolyl cis-trans isomerase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3330" FT /db_xref="GOA:Q7W4J5" FT /db_xref="HSSP:1J6Y" FT /db_xref="InterPro:IPR015391" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4J5" FT /protein_id="CAE38950.1" FT /translation="MMRSLHSLRRMSGTVLALMLAAGLPLSAAQAQPAKPAPKGDQKPA FT TPAPSEQFVDGIAAIVNKDVITLREVREASKLASADLQKRGIQVPDERTLQKQVLQRLI FT MERLERQEVDRMGIRVDEAQVDQAINMIASRNKITPAAMRAEIEKSGVTWEQYRKSLRD FT DIRMDRLRQRAVDANIIISDAEVDAFLKDQERNPAAAQATRAPAPQQPQPQPRQPAQSG FT PAMLVLAQILVRVPEGSSPDQVAALRKKAEGLLARAKKGDDFASLAAANSDGPEALQGG FT MMGARPLDGWPDLFVKAAGSLSAGQVSGLVQSGNGFHILKVVDRAGGGQPAQAARPAPA FT PAPQQPSSFQEGPSVAAPQGPVRVTQTHARHILIKTSTVMTDDQARQRLEQIRERLQGG FT AVKFEDMARQYSQDSTAPQGGDLGWVNPGDTVPPFEAAMNALQPNEISPPVLSPFGWHL FT IQVLERREHDVSDEVQRMRARQLLFERRAVPAFEDWLEQLRSQAFIDNRLEKQERLEQN FT NR" FT misc_feature complement(136280..136579) FT /note="HMMPfam hit to PF00639, PPIC-type PPIASE domain, FT score 1e-36" FT misc_feature complement(136697..137002) FT /note="HMMPfam hit to PF00639, PPIC-type PPIASE domain, FT score 9.5e-13" FT misc_feature complement(137576..137668) FT /note="Signal peptide predicted for BPP3666 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.804 between residues 31 and 32" FT CDS complement(137665..140037) FT /transl_table=11 FT /locus_tag="BPP3667" FT /product="putative outer membrane (permeability) protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3329" FT /db_xref="GOA:Q7W4J4" FT /db_xref="InterPro:IPR007543" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4J4" FT /protein_id="CAE38951.1" FT /translation="MRMLRWLILSAFSVAGAVQAQGNQDSAAASASSASIGAPVLRTSP FT GLRVHRLPDEKIPAFMEADQISGDPDSEVTLTGNAQVRRVDGIIKGDRINYRRDTGDVD FT VQGSARMLRDGTLITGPSARLNVDTYSGEIQEPNFWIGASGGTAQARHADIFSKSQMRL FT SQVTYSGCPCPKPSWYIKADTVDLDFDENEGVARNGVLYFKDVPILASPYLTFPVKKER FT KSGFLMPTYGTTSNSGFDISLPYYFNLAPNYDLTLVPRYLSKRGAQLGGEFRYLGSGYR FT GVAIGTYLPDDNETGRDRWMYRTYHRQLLGNGFYTDWDIAGASDDNYFRDISELGLNTA FT STTYLPRRGRVGWSSTYWQTYAQVYKYQTLQDPDAPLAPPYDKVPELWLKGARYDWGGF FT DAEWVSTAVRFQRPLLNGRRLGPDGDRLQTYPTVSYPIVRPGWFLVPKVGVHYTQYRTD FT WYNRDWNRIGLSNYKRTESRTVPIMSLDAGMIFERDASLFGKAATQTLEPRLYYLRVPY FT RDQSALPVYDTTLADFSFDQAFQENIYTGGWDRIANANQLTAALTTRWLDANTGFERLS FT LSAAQRIYFQDQEVTLPAEQPRKNVRSDFLVGATAALTDTLTTDVAAQYNPYDNKWSRG FT MVSARWSPQRLTTVAVAYRYQRDPLPGISYQPQGQNQVSLAVQWPIHRRWYGVGRVDYS FT LRSEPATAAAAEQSPRVTQAIAGLEYKGDCCWVGRVVYQRYAVSAADTNTALFFQLELT FT GLGALGTDPISLLNRSIPGYQSVVPPTPTGTTFERYE" FT misc_feature complement(139978..140037) FT /note="Signal peptide predicted for BPP3667 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.907 between residues 20 and 21" FT CDS 140147..141250 FT /transl_table=11 FT /locus_tag="BPP3668" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3328" FT /db_xref="InterPro:IPR002575" FT /db_xref="UniProtKB/TrEMBL:Q7W4J3" FT /protein_id="CAE38952.1" FT /translation="MPGTGLPIRGRRDPETIETRCLNNDQDSRLALIHAWLQTLPGSLG FT LRPETMEPASSDASFRRYFRLQAAAGTLIVMDAPPPHEDVRPFVHIDGLLREAGVNVPE FT IVAQDAGQGLLLLSDLGQDTFYQRIRAGISDAQLQSMYRDTLATLVRLQQASTAGLPAY FT DGARLAAELELFPEWYVGRHHGVTLDDKTAAALRQIFGLLAAEGDTGHRVLVHRDFHSP FT NLMVCDEPRYGPNPGVIDFQDALAGPLTYDLASLVTDARTTWEEPQQLDWAIRYWELAR FT AAGLPVDADFAQFHRAYEWTGLQRNLRILGVFARLNHRDGKSIYLSHMPRVSGYVRQVA FT QRYGAFAPLLRLLDKLDDRQVQVGYTF" FT CDS 141250..141942 FT /transl_table=11 FT /locus_tag="BPP3669" FT /product="putative nucleotidyl transferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3327" FT /db_xref="GOA:Q7W4J2" FT /db_xref="HSSP:1H5R" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/TrEMBL:Q7W4J2" FT /protein_id="CAE38953.1" FT /translation="MRAMILAAGRGERMRPLTDTTPKPLLAVGGKPLIVWHIERLVAAG FT LRDIVINHAWLGQRIVDHLGDGGAYGARLRYSAEAAALETAGGIAQALPLLGDAPFLVI FT NGDIWCDWDPAQARRQAAALDAAGAQAWLLLVDNPPQHPQGDFRLEDDGRVADDGAPKL FT TFAGIGLYRPALFDPVARSSAAPLAPLLRQAMARRAVIGARHAGRWTDVGTPQRLAALD FT GQLRPEGT" FT misc_feature 141253..141933 FT /note="HMMPfam hit to PF00483, Nucleotidyl transferase, FT score 6.9e-14" FT CDS 142086..142787 FT /transl_table=11 FT /locus_tag="BPP3670" FT /product="putative inner membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3326" FT /db_xref="UniProtKB/TrEMBL:Q7W4J1" FT /protein_id="CAE38954.1" FT /translation="MAFGRSQRQVFKPSVYQPGKRTRRMPRWLVLLLVGIALGAGGVLF FT LQTNYGPQRLTVEQSEQLHTELSAANLERQRLQTQLDEAIGQRDANKSTHEQLTTDLAQ FT ARTRIDTLNQELLLFQDAMPPDPRGGDIGVRSAVFKRQPGQLSYQVLIMRENHAGPAFK FT GNVTLAIEGNYANGRRGTLTPDPLALDLQRYNNTQGVLPLPDGFTPRSVTIRVLDGQQK FT QHAMRIYYVRG" FT misc_feature 142086..142223 FT /note="Signal peptide predicted for BPP3670 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.773) with cleavage site FT probability 0.492 between residues 46 and 47" FT misc_feature 142167..142235 FT /note="1 probable transmembrane helix predicted for BPP3670 FT by TMHMM2.0 at aa 28-50" FT CDS complement(142772..143149) FT /transl_table=11 FT /locus_tag="BPP3671" FT /product="putative pterin-4-alpha-carbinolamine FT dehydratase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3325" FT /db_xref="GOA:Q7W4J0" FT /db_xref="InterPro:IPR001533" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4J0" FT /protein_id="CAE38955.1" FT /translation="MPAGGRGRGEFAMSTEFPMRIGAEVALPALQGWNAAAGRDAIEKR FT YRFDNFNAAFGFMARVAMFAEKMDHHPEWRNVYNRVDVTLTTHDAGGVTELDVRMAQFM FT DEAAGRLGATGLPARADQPRT" FT misc_feature complement(142823..143098) FT /note="HMMPfam hit to PF01329, Pterin 4 alpha carbinolamine FT dehydratase, score 4.5e-34" FT CDS complement(143173..143799) FT /transl_table=11 FT /locus_tag="BPP3672" FT /product="putative outer membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3324" FT /note="Similar to Porphyromonas gingivalis immunogenic 23 FT kDa lipoprotein pg3 SWALL:Q9XCA4 (EMBL:AF145799) (223 aa) FT fasta scores: E(): 1e-18, 40.68% id in 204 aa" FT /db_xref="GOA:Q7W4I9" FT /db_xref="InterPro:IPR006665" FT /db_xref="UniProtKB/TrEMBL:Q7W4I9" FT /protein_id="CAE38956.1" FT /translation="MRVAVVSAAALLISGCATPQQTNTAIGTGAGAAVGAGIGALIGHG FT KGAAIGAGIGAVAGGLIGYNWSGVKQDVQQSGASSLGIDVVEMPDGSLKVNIPSNVSFD FT TDKSQLKPALLPVLDSVARALNQHPELRTKVVGHTDSTGSAAHNQQLSVNRARAVTSYL FT GKQGVAQGRMTVEGRGANDPVGDNATAEGRAANRRVEVYLYAVKQ" FT misc_feature complement(143209..143496) FT /note="HMMPfam hit to PF00691, OmpA family, score 7.4e-28" FT misc_feature complement(143752..143784) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(143934..144806) FT /transl_table=11 FT /locus_tag="BPP3673" FT /product="carboxyvinyl-carboxyphosphonate phosphorylmutase" FT /EC_number="2.7.8.23" FT /note="ortholog of Bordetella pertussis (BX470248) BP0718" FT /db_xref="GOA:Q7W4I8" FT /db_xref="HSSP:1UJQ" FT /db_xref="InterPro:IPR000918" FT /db_xref="UniProtKB/TrEMBL:Q7W4I8" FT /protein_id="CAE38957.1" FT /translation="MSNSTKRVLRERVAQRNGMLVAGAFNAMSARIVADQGFEAVYLTG FT AGLTNMHYGAPDLGIIGLRDVADATSRIRDAVELPLIVDADTGFGNAVNVWHTVRVLER FT AGADAIQLEDQVFPKRCGHFAGKSVAPLSEMVSKIKAAADARRDEDFLIIARTDARAVE FT GFDAAIERARRFAEAGADILFVEAIVDQDEVGKLPQLLSQPLLVNIVVGGKTPPMPAAQ FT LGRLGYSVVLYANATLQGAVLGMQRALGALRRDGKLDEDPALLAPFLERQRLVGKPLYD FT ELEERYKDA" FT misc_feature complement(144705..144806) FT /note="Signal peptide predicted for BPP3673 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.731) with cleavage site FT probability 0.411 between residues 34 and 35" FT CDS 145147..145365 FT /transl_table=11 FT /locus_tag="BPP3674" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0720" FT /db_xref="UniProtKB/TrEMBL:Q7W4I7" FT /protein_id="CAE38958.1" FT /translation="MSRKYIDCREFPSEMNCSVALSADSDAELLEAAVQHATTVHKHAD FT TPELRAQLKTMFHEGTPPLAAQAGSRA" FT CDS complement(145405..146784) FT /transl_table=11 FT /locus_tag="BPP3675" FT /product="probable aminotransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0721" FT /db_xref="GOA:Q7W4I6" FT /db_xref="HSSP:1DKA" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q7W4I6" FT /protein_id="CAE38959.1" FT /translation="MNDLATINDLHSVVEDDRNAIWHHMLQHDALQATAPWVVVEGKGT FT RIRDASGKEYLDATAGGLWTVNVGYGRERIANAMRDQMLKLNYFAQSAGNVPGALFARQ FT LVSKMPGMSRVYFSNSGSEANEKVFKMVRQISARHHAGRKYKILFRERDYHGSSIATLA FT AAGQPERAAQYGPFPDGFVQVPHCLEYRKQWDVANYGERAADAIEEVILREGPETVGLL FT CLEPITAGGGIIVPPEGYWRRVQEICRRHDVLLHIDEVVCGLGRTGKWFGYQHFDIEPD FT FVTLAKGTASGYAAIACTVTHERIFEQFKDEPDDPLSFFRDVSTFGGCAGSAAAALENL FT RILEEEGLVEHAAQVGDYLQACLRQLADKHAVIGDVRGKGLLQGVELVSDRAAKTPVSE FT ADAKRVVAQCKAQGVLIGVITRALPGLNTTLCLAPPLILTRDEVDELCGAIDRALATVF FT G" FT misc_feature complement(145411..146709) FT /note="HMMPfam hit to PF00202, Aminotransferase class-III, FT score 1.1e-89" FT misc_feature complement(145891..145923) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(146826..148223) FT /transl_table=11 FT /locus_tag="BPP3676" FT /product="probable amidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0722" FT /db_xref="GOA:Q7W4I5" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q7W4I5" FT /protein_id="CAE38960.1" FT /translation="MTSELWRLSACEIVAGVKSGAFSASEAVRAALDRMEAVNGRINAV FT VDSDPQAALAAAARVDARIAAGEDPGPLAGVPVTVKVTHDQAGFATTMGIRKLKDHRAA FT ANSPIVDNFERAGAIPIGRTNMPAFGLRWFTNGRLHGDTYNPFDRSLTPGGSSGGASAA FT VASGIGAIAHGTDIAGSIRYPAYACGVHGLRPTLGRIPNYNASFPERGLGGQLMSVSGP FT LARTVADIELSFAALAHADPRDPWWVPAPLAGPARPRRVALCLRPDGLEIDAGVADALL FT DAAARLRDAGWEVAELDDIPPMRDAAVAQVTLWLGDEYPALLAEAQAEGDPGALAMLRG FT QPQSAGVTLQSYCSALKARASYLRQWMLFFEDYPLMMLPVSARLPFANDLDTRSAADYD FT SVWEAQMPQLGLAFMGLPCMSVATGMCGSAPVGIQLAAGRYREDLLFLAAEDIAARGMP FT PVPVDPV" FT misc_feature complement(146886..148148) FT /note="HMMPfam hit to PF01425, Amidase, score 2.7e-62" FT misc_feature complement(147669..147764) FT /note="PS00571 Amidases signature." FT CDS complement(148263..149915) FT /transl_table=11 FT /locus_tag="BPP3677" FT /product="probable ABC transporter, ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0723" FT /db_xref="GOA:Q7W4I4" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W4I4" FT /protein_id="CAE38961.1" FT /translation="MIFRKRDLQHRPVVLRIAGLSLVDGQPGAGSAILRDIDVDIRQGE FT TVCLVGESGSGKSMTSLAVMGLLPKGHLRVTGGRIELDGQNLLDLGPAALRDLRAKRIS FT MIFQEPMTALNPVMKVGPQIEEVLDSHTALPRREKKQRVLDIMEQVHLSDVARIYESYP FT HQLSGGQRQRIMIAMALVLEPRLLIADEPTTALDVTTQNQVLKLISELQHKHDTAVLFI FT THDMGVVAEIADRVYVMRLGEIVESAPVEQLLREPRQDYTRKLLKSVPSLIPRPGRAAP FT QACATLQVQGLAKRYAMGGFPGRRREVQAAHDVAFSIQPGRTLGIVGESGSGKSTVARC FT VMRLIEPSEGAIRVGDADIARLGPRQLKPFRKHLQIVFQDPYRSLNPRRTIGASLIEGP FT VNFGQDRQAALAQAAELLELVGLPADALARYPHQFSGGQRQRIAIARAIAMRPDVLVAD FT EAVSALDVSVQAQVLELLDTLQRKLDIAILFITHDLRVATQICDEVMVMRHGRVVEHDT FT AENVLARPAHAYTRALIEAAPGRDWDFANFRER" FT misc_feature complement(148386..148955) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.6e-61" FT misc_feature complement(148572..148616) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(148911..148934) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(149190..149786) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.8e-56" FT misc_feature complement(149376..149420) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(149742..149765) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(149919..150803) FT /transl_table=11 FT /locus_tag="BPP3678" FT /product="probable ABC transporter, permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0724" FT /db_xref="GOA:Q7W4I3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W4I3" FT /protein_id="CAE38962.1" FT /translation="MTTLPQPASALQAVFRVTQLPAWCRFGWPPIAAALVLAVLVLATA FT AAYLYIPHDPIAINPLMRLKPASADHWLGTDALGRDVFSRVMAGGQVSLLVGVAAAVIS FT IAAGLCIGLVSGFFRVLDGVVMRIMDAVMSVPSILLAIALVALNGPSIWSVIIAITVPE FT VPRVVRLVRSVVLSAREEPYVEAALALGTSMPGILWRHIMPNTLAPLMVQATYVCASAI FT LTEAVLSFLGAGVSTEIPTWGNIMAEARMYFQIRPGLMLWPGLLLSLCILSINLLGDTA FT RDMLDPRLKRRGE" FT misc_feature complement(join(149970..150026,150087..150152, FT 150327..150392,150453..150518,150648..150713)) FT /note="5 probable transmembrane helices predicted for FT BPP3678 by TMHMM2.0 at aa 30-52, 95-117, 137-159, 217-239 FT and 259-278" FT misc_feature complement(150060..150281) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 7.5e-09" FT misc_feature complement(150192..150278) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS complement(join(150803..151429,151431..151745)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP3679" FT /product="probable ABC transporter, permease protein FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP0725" FT /db_xref="PSEUDO:CAE38963.1" FT misc_feature complement(join(150825..150890,150984..151049, FT 151158..151214,151275..151340,151380..151445, FT 151665..151730)) FT /note="6 probable transmembrane helices predicted for FT BPP3679 by TMHMM2.0 at aa 5-27, 100-122, 135-157, 177-196, FT 232-254 and 285-307" FT misc_feature complement(150920..151135) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.015" FT CDS complement(151824..153443) FT /transl_table=11 FT /locus_tag="BPP3680" FT /product="probable ABC transporter, periplasmic binding FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0726" FT /db_xref="GOA:Q7W4I2" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q7W4I2" FT /protein_id="CAE38964.1" FT /translation="MFIARNAADPAVKIRAGARLAAVAAALCGLAATVPAAAQAPKTVT FT AVMHSGLRVLDPIITTAHITRNHGYMIYDVLVSMDKDFNVRPQMADFSVSPDGLTYTFT FT LRDNLWFHDGAPVTAADVVASLKRWGERDTGGQHIFDQTESLAATDARTITWKLSKPFG FT PMLETLGKQSTVPPFIMPERVARTPSSEAITDYTGSGPFRFVLDEFSPGVKVAYAKFDK FT YVPRNEPANWMAGGKVVKVDRVNWVTMPDAQTAVSALSSGEIDYLEQTPTDLLPILESN FT ADVVLEVRDQLGYQALGRMNFKQPPFNDKRIRQAALKAMSQEPILAAMVGNPKYYQVCG FT AVLGCGTPLASEAGAGALTGKGDVEGARALLKEAGYDGSPVVILQPTDVPILAAPPLVA FT AQQLRAAGFKVDLQPMDWQTLVTRRTNKGAPSQGGWSMFFSYWMVPEVTTPLINATLNA FT RGDEGFFGWAQDPELEAMRGEYIKAGSPQAQLDVAKRIQARVMDEVTYLPLGQFQTVQG FT RRANLVDIIASPVPVFWQMDKK" FT misc_feature complement(151830..153392) FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5, score 2.2e-15" FT misc_feature complement(153327..153383) FT /note="1 probable transmembrane helix predicted for BPP3680 FT by TMHMM2.0 at aa 20-39" FT misc_feature complement(153330..153443) FT /note="Signal peptide predicted for BPP3680 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.895 between residues 38 and 39" FT CDS 153610..154425 FT /transl_table=11 FT /locus_tag="BPP3681" FT /product="probable transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0727" FT /db_xref="GOA:Q7W4I1" FT /db_xref="InterPro:IPR005471" FT /db_xref="UniProtKB/TrEMBL:Q7W4I1" FT /protein_id="CAE38965.1" FT /translation="MRRSIVNSKLGVRSPTEEELEDPLFVQAAARTLQVLSAFHRAVRP FT MSLDEIAEASGVGRSSTQRILNTLRVLGYVERSDGGRGYVPGIRILDHALDYLRLNTLI FT SRASPVLLDLRRNALERVDLSVFDDLRLVYASRLQSKRETFFATLVGHSVPTFCTAGGR FT AILSHLPGAEVDDIIARSDRTPFTDKTITAPREIRKKVEQARVSGYAVTIEEVLVGEIG FT IGVAVLGADGRPVGAIHIAGSLSEWTPEAFTARFAPLAVEAATAINRLS" FT misc_feature 153859..154419 FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator, score 2.7e-21" FT CDS complement(154493..155062) FT /transl_table=11 FT /locus_tag="BPP3682" FT /product="probable transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0728" FT /db_xref="GOA:Q7W4I0" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q7W4I0" FT /protein_id="CAE38966.1" FT /translation="MVRPRTIDRERLLDIAESIISEAGAVTISFGGLAEAAGLSKASVQ FT SVFGTREAMMEALLERWLRKEQRAYQKKIGPQSSLRERVRRHVKITGKESSEANSRLAA FT VLTALVGSDATEGVMAKWYASRVGKFSAETQEERLLRIAFLAAEGAFFMRHVAGFPMSD FT RLWRELFHDLLDFVAEPVGGAARSAA" FT CDS 155619..156716 FT /transl_table=11 FT /gene="nspC" FT /locus_tag="BPP3684" FT /product="carboxynorspermidine decarboxylase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0731" FT /db_xref="GOA:Q7W4H9" FT /db_xref="InterPro:IPR005730" FT /db_xref="UniProtKB/TrEMBL:Q7W4H9" FT /protein_id="CAE38967.1" FT /translation="MLKTPYYLIDKRALLQNLEVIRRIRERSGAKVLLALKCFATWSVF FT DLMREYMDGTTSSSLFEVRLGREKFGGETHAYSVAYAEDDIDDVVACADKIIFNSLSQL FT ERYAPRASAIPRGLRLNPGISVSGYDLANPARPFSRLGETDLDRIAQAMPMIDGFMVHN FT NCENRDFTRFDALLTELEHRYGHLLGQINWISLGGGIHFTEPGYALDAFCDRLRRFSEQ FT YGVQVYLEPGEAAITNTATLEVTVLDVMRNEKNLAIVDAATEAHMLDLLIYRMSARVQP FT DQGPHRYVIYGNSCLAGDVFGEFSFESPLQPGSRISIQDAAGYTMVKKNWFNGVRMPAI FT AIRELDGEIRLVREFGYQDYVDSLS" FT CDS 156750..158015 FT /transl_table=11 FT /locus_tag="BPP3685" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0732" FT /db_xref="GOA:Q7W4H8" FT /db_xref="InterPro:IPR005097" FT /db_xref="UniProtKB/TrEMBL:Q7W4H8" FT /protein_id="CAE38968.1" FT /translation="MKRNVLIIGAGGVAHVVAHKCAQHNATLGEIHIASRTLDKAQGIV FT RSVHAMSNLQTNGVVKAHGLNALDIKATAALIRATNARIVIQAGTSFLNMAVLAACIET FT GAAYIDTAIHEDPAKTCEAPPWYANYEWKQAQACADAGVTAILGAGFDPGVVNAYAKLA FT VDELFDEVSSIDIIDTNAGSHGKYFATNFDPEINFREFTGSVWSWQEGRWCENRMFEEQ FT RAWDLPVVGRQTTYLTGHDEIHSLSTHLNVPNIRFWMGFSDHYINVFTVLNSLGLLSEQ FT PVRTAEGQQVVPLKVVKAVLPDPASLARTYKGKTCIGDLVRGVKDGRPHEVLIYNVCDH FT EQAYREVGSQAISYTAGVPATAAALLIADGAWDNRKMNNIEQLAPRPWLQLLETMGLPS FT RIRDAHGDRALLSPCGKLLKAA" FT misc_feature 156750..156809 FT /note="Signal peptide predicted for BPP3685 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.648) with cleavage site FT probability 0.520 between residues 20 and 21" FT misc_feature 157671..157694 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(158071..158559) FT /transl_table=11 FT /locus_tag="BPP3686" FT /product="ECF-family sigma factor" FT /note="ortholog of Bordetella pertussis (BX470248) BP0738" FT /db_xref="GOA:Q7W4H7" FT /db_xref="InterPro:IPR007627" FT /db_xref="UniProtKB/TrEMBL:Q7W4H7" FT /protein_id="CAE38969.1" FT /translation="MEQYYTELLRFLARKLGNSHDAADVAQEAYARVLDRNGSCAIVQP FT RAFLFRAALNLCTDLYRNRRGSQVMPLDAAAEAVRCEAPLQDERLYRRQQLARLERALQ FT ELPPACRQAFLMRQVEGMSHDEIANSLGISVDMVHKHLTRALRHCRSRMRAWEHGADA" FT misc_feature complement(158368..158532) FT /note="HMMPfam hit to PF00776, Sigma-70 factor (ECF FT subfamily), score 0.00014" FT CDS 158690..159661 FT /transl_table=11 FT /locus_tag="BPP3687" FT /product="putative inner membrane sensor for iron FT transport" FT /note="ortholog of Bordetella pertussis (BX470248) BP0737" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q7W4H6" FT /protein_id="CAE38970.1" FT /translation="MAVPPSKQDDLLTEQAVQWCVRIHDASCSEQDRAALQAWLEADPR FT HAREYEAVRDIWTLAQDLPAHEAPAKACAPRRRPYPAARRALGACALGLACWAAGWWFA FT VLPSSYHRYASDARVATVTLGDGTEVDMNIDTAMVYRNYRDARRVRLSDGEAYFRVFHD FT ASHPFVVEAGAGTITVTGTAFNVWKSGDNVVVTLVEGRVDLRASATGKTVSLQPLTQAR FT YAGRGEPVTRAVDGAQSAAWRHGKLVLDNTTLRDAIMQINRYLPAEARYTTVDPAIAGL FT RLGGTYDVRNVGELARALPDILPVRTVRKADGSLALVPNPPR" FT misc_feature 158945..159004 FT /note="1 probable transmembrane helix predicted for BPP3687 FT by TMHMM2.0 at aa 86-105" FT CDS 159781..162225 FT /transl_table=11 FT /gene="bfrF" FT /locus_tag="BPP3688" FT /product="putative ferric siderophore receptor" FT /note="ortholog of Bordetella pertussis (BX470248) BP0736" FT /db_xref="GOA:Q7W4H5" FT /db_xref="HSSP:1BY5" FT /db_xref="InterPro:IPR010105" FT /db_xref="UniProtKB/TrEMBL:Q7W4H5" FT /protein_id="CAE38971.1" FT /translation="MVITFNLFSVKHSMRARPSAATRALHSSSRPRRLIPALLGALACL FT GTGVQAAPIDVDIPPQNLAQALHQLGRQANLQVLYSQDLVDGQRSPAVQGRMEPAEALE FT RLLKGRNIRYSIQHNTVTLTPMPLTATLPAISVVGALPDSDTYVATGTTAGTKTDTPLI FT EIPQSISVVTAAQIREQNPQTLGDAVRYTPGIVVQEGFNRTDDPFIIRGFDVRTNPGVM FT FRDGLKIPLPHYSAMSEPYALERIEVVKGPASVLYGQASPGGIVNVVSKRPTDSPLREL FT QLSGGSHSNRQLAGDFGGRIDDEGRLTYRLTGLARNADTMIDHVPDDRYYLAPALTWRI FT SPDTSLTLLASYMKNKTINNAGYPLEGTVKYNPNGRIPRHRFTGEPDWSKWDQEVANVG FT YQFAHRFNDTWQFKQNLGYAQSRNRVNHAYWWTWVPGSDFSTAERGAYRRDDDAHGVSI FT DNQFEATWQSGRFRHNTLSGLDYTETSFTRKQYAGYNNLAPIDFFDPAYGSDVLLPAKP FT DTYTNEKRSQLGLYLQDQIKFDDKLVVVLSGRYDNADGSTLNKLSGVNTRTGDNAFTWR FT TGLLYLADNGLAPYISYSTSFQPQAGTTSPARGTTPFDPTKGKQWEAGVKYQPNGSNLF FT ITASVFELTRTNVPTTDPANPVYSVQEGEVRSRGLELSATANLASGWNLIAAYTYTDAE FT ITKSNSNTLGNTPEAVPRNMASLWSDYTVPSGALAGLNIGAGVRYMGSTYNNTNAAKVG FT DYTVFDAAVRYDFGARSPSLKGWTADLTVRNLFDKDYVASCTYACFYGEGRTVLGRVTY FT KW" FT misc_feature 159781..159933 FT /note="Signal peptide predicted for BPP3688 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 51 and 52" FT misc_feature 159880..159912 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 161893..162219 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00593, TonB dependent receptor FT C-terminal region, score 1.7e-28" FT CDS complement(162241..162831) FT /transl_table=11 FT /locus_tag="BPP3689" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0735" FT /db_xref="InterPro:IPR007372" FT /db_xref="UniProtKB/TrEMBL:Q7W4H4" FT /protein_id="CAE38972.1" FT /translation="MKKNYPAYFAATLLALAGLSAQAAPVDYQIDPEHTEIVVTWDHLG FT FSKPTAHAGGVTGVVRYDAASPADSAVDLRIPVSKLTSHVPKLDGMLQGVQFFEAARYP FT DIRFKSTSVTDRGDGRLQIDGILRIKGIDKPVVLQARRNGQGMHPMAQRPAIGFDATTT FT LKRSDFGVDAFAPDVSDEVQLRITIEAVAEAAR" FT misc_feature complement(162763..162831) FT /note="Signal peptide predicted for BPP3689 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 23 and 24" FT CDS complement(162921..163883) FT /transl_table=11 FT /locus_tag="BPP3690" FT /product="putative enzyme-regulator fusion protein" FT /note="Appears to have two distinct portions. C-terminal FT region similar to regulators eg. Yersinia pestis regulator FT of nucleoside diphosphate kinase Rnk or ypo3695 FT SWALL:Q8ZAU1 (EMBL:AJ414158) (136 aa) fasta scores: E(): FT 1.4e-10, 38.97% id in 136 aa, and to Escherichia coli FT O157:H7 regulator of nucleoside diphosphate kinase Rnk or FT b0610 or z0754 or ecs0649 SWALL:RNK_ECOLI (SWALL:P40679) FT (136 aa) fasta scores: E(): 5.8e-09, 38.16% id in 131 aa. FT N-terminal region similar to predicted acetyltransferase FT eg. Streptomyces coelicolor putative acetyltransferase FT sc6g4.29 SWALL:O86792 (EMBL:AL031317) (177 aa) fasta FT scores: E(): 0.16, 30.07% id in 133 aa" FT /db_xref="GOA:Q7W4H3" FT /db_xref="InterPro:IPR001437" FT /db_xref="UniProtKB/TrEMBL:Q7W4H3" FT /protein_id="CAE38973.1" FT /translation="MAVAMKGFHSLQPNVVKMNKPFISLCPEITRAHALTLMDWLEDEH FT VTRHLSDSRHVSRFIEQVIDRVQLPVLTHLFNQGGRFFMAYDRHDVPVGFVRLVKTGSD FT CEIVLVIGNRDNWGRKLGASAIREGMKLAFFEMRAARLIAKVHPDNERSLNAFLRCGFV FT LESETPTLKSFSMTVERYLRFLRESAAGEPSGIQITEIDQARLRSLLELEQGPALAELE FT HEVERAVVVDPRQVAGNVVTMNSRALLNVDDEQVEVALVYPDDADDSAGKLSVFSDFGT FT AILGYQEGDAVDWRISDRTRRIWIEKVLYQPEAAGDFHL" FT misc_feature complement(163395..163634) FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 7.3e-09" FT CDS 164118..165434 FT /transl_table=11 FT /locus_tag="BPP3691" FT /product="putative ring-hydroxylating dioxygenase large FT subunit" FT /note="Similar to Pseudomonas sp. CA10 large subunit of FT terminal oxygenase component SWALL:Q9AQN3 (EMBL:AB047548) FT (443 aa) fasta scores: E(): 1.8e-46, 31.96% id in 438 aa, FT and to Escherichia coli O157:H7 3-phenylpropionate FT dioxygenase alpha subunit hcae or phdc1 or hcaa or hcaa1 or FT diga or b2538 or z3809 or ecs3404 SWALL:HCAE_ECOLI FT (SWALL:Q47139) (453 aa) fasta scores: E(): 1.4e-34, 28.91% FT id in 453 aa" FT /db_xref="GOA:Q7W4H2" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/TrEMBL:Q7W4H2" FT /protein_id="CAE38974.1" FT /translation="MTSYTAAGLGELVQRDGALVNGRIYTDPEIFGLEMERIFSKVWVY FT VGHESQVANPGDYMTGYLAQQPIILTRDRAGQIHVLFNRCTHRGAKIVNRERGNERLLT FT CMYHGWAFGHDGELRGIPLKKDFPAEAVEPCKASLARPPRVDAYRGFIFASLNPDVEPL FT RDYLGAAASGIDEIVDRAPAGTIRLSAGCHRYIYEGNWKLQTDNLGDMYHPVACHSSTV FT DEDGKQFKRRPGDEGGRAAFLGADGEPIVIQTGVRGFLRGHSSEASLFGANDIVKEETR FT QRGGIIDEYRSLLIEQHGVEKTDEILKNRRHSMTLFPNLDVLMVQTSVRVVIPLAYNRT FT EVRIYPVHLDGTPDELNRQIIKFLNITHSAASFIQTDDLEAFKRQQEGLAARSPQWLIV FT ARGQGSEIDEGNGAYFGPRASEVGQRMRHQYWRELMMAE" FT misc_feature 164241..164555 FT /note="HMMPfam hit to PF00355, Rieske [2Fe-2S] domain, FT score 1.2e-27" FT misc_feature 164370..164441 FT /note="PS00570 Bacterial ring hydroxylating dioxygenases FT alpha-subunit signature." FT misc_feature 164604..165428 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00848, Ring hydroxylating alpha FT subunit (catalytic domain), score 4.2e-10" FT CDS 165440..165961 FT /transl_table=11 FT /locus_tag="BPP3692" FT /product="putative ring-hydroxylating dioxygenase small FT subunit" FT /note="Similar to Burkholderia sp. RP007 aromatic FT 1,2-dioxygenase beta subunit PhnY SWALL:Q9RB87 FT (EMBL:AF112137) (197 aa) fasta scores: E(): 1.7e-18, 44.37% FT id in 151 aa, and to Acinetobacter calcoaceticus benzoate FT 1,2-dioxygenase beta subunit BenB SWALL:BENB_ACICA FT (SWALL:P07770) (169 aa) fasta scores: E(): 5.5e-08, 27.16% FT id in 162 aa" FT /db_xref="GOA:Q7W4H1" FT /db_xref="InterPro:IPR000391" FT /db_xref="UniProtKB/TrEMBL:Q7W4H1" FT /protein_id="CAE38975.1" FT /translation="MLKKIDDSESLLDTAALAPLQRFVERECRLLDEQRFEEWLALYLP FT EATYWAPATRDNPDPDSQVSLFWDDKETMQTRVQRLLHPEIHSQIPASVTVRLTSNFRA FT AVAPGGEKDAYQVECRFIMVEDRLGSPRQQFAGTFNYLLVQNGAAFRIRQKRVDLTNCD FT HAFHTLTQPF" FT misc_feature 165515..165940 FT /note="HMMPfam hit to PF00866, Ring hydroxylating beta FT subunit, score 1.2e-11" FT CDS complement(166090..167064) FT /transl_table=11 FT /locus_tag="BPP3693" FT /product="putative LysR-family transcriptional regulator" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 glycine cleavage system transcriptional activator FT GcvA or b2808 or z4125 or ecs3668 SWALL:GCVA_ECOLI FT (SWALL:P32064) (305 aa) fasta scores: E(): 1.7e-15, 36.82% FT id in 315 aa" FT /db_xref="GOA:Q7W4H0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4H0" FT /protein_id="CAE38976.1" FT /translation="MSLPSLTALRTFEAAARYRSVKLAAAELHVTPTAVSHQIQQLEDL FT LGVKLFERTGRGLVLTDAAVSCLPYLQQGFELLKVGVDKLRKHRGPDIITVNTSPSFAS FT LWLFPRLHRFSLLYPDIDVRVTTRLRQAAQLRQEQQSGVNNVQDWIQEADLVIAYGNGQ FT FGGFEHEELIPLYIAPMCSPALLPKGEKQAMGSRLLELPWLHDDRGTLYGSASFWQRWL FT AAAGLADGKPAKEMHFTHALLALSAAADQLGVVVSTPVLAESLLRDGILYLPFDEQVRI FT DRSYYLVKDASTGNDSRLTIFKEWLRQEAALSNAKGTSAQRLA" FT misc_feature complement(166132..166806) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.1e-16" FT misc_feature complement(166870..167049) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2.8e-26" FT misc_feature complement(166915..167007) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 167330..168349 FT /transl_table=11 FT /locus_tag="BPP3694" FT /product="putative exported protein" FT /note="Similar to Variovorax paradoxus, and Burkholderia FT cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 FT (EMBL:AB028643) (337 aa) fasta scores: E(): 1.2e-30, 36.42% FT id in 291 aa" FT /db_xref="GOA:Q7W4G9" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W4G9" FT /protein_id="CAE38977.1" FT /translation="MSRKKSPRGGFRSRLRRAGGTLASIIVATACTLPVTSPARAEYPN FT RPVTLVVPYSPGGGVDAVARVFARSLSDKFKQSVVVENRPGAGAMIGIDYANRARPDGY FT TLLIVDPAFVINPSLQPQVSYKVSDLKPVGILTGSPLVLVSAKNSRFDSLAGMLKISKV FT EGKGVTYATPGIGTTPHMAGELLRETQGANLTQVPYKGSGPATADVISGQVDVGFMSIT FT AAATFLKENRLQGLATSGTARSTVLPDLPTIAEVTQSDYSVLFWTGLFISAKVPDEIQQ FT SLAAAVQAVYADPAYAKGLAGLGETPVGTKLADPGQYVNAEYSKWAALIAKANLKQKD" FT misc_feature 167516..168334 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.4e-80" FT CDS 168356..169186 FT /transl_table=11 FT /locus_tag="BPP3695" FT /product="putative hydrolase" FT /note="Similar to Rhodococcus sp Etbd1 SWALL:O82828 FT (EMBL:AB004320) (274 aa) fasta scores: E(): 4.8e-29, 35.38% FT id in 260 aa, and to Pseudomonas sp. 2-hydroxymuconic FT semialdehyde hydrolase DmpD SWALL:DMPD_PSESP (SWALL:P19076) FT (283 aa) fasta scores: E(): 3.9e-28, 33.2% id in 262 aa" FT /db_xref="GOA:Q7W4G8" FT /db_xref="HSSP:1C4X" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7W4G8" FT /protein_id="CAE38978.1" FT /translation="MAQKTMDRKQTTFNGLRVAYWEGGSGEPLRLIHGSGPGASTLGNW FT RLVLDELARDFHVIAPDLIGFGQSDRKPEAPYFDLDLWAVQAKAALDLFDSARINVLGH FT SLSGYLALRLASEDARVRAVMTTGAMGVPFPLNDDLERTWSFPPTREAIVRAGESLVYD FT RDVLTEAYVQGRVDVLHQGDYGAYFSAMFAGDKQQYIDAAVLPAQAWGRIQCPVMLVHG FT RNDLPIPFERSALEIARRLPHADLVALAHCGHSPALEHPGKLAALARLFFHPAP" FT misc_feature 168521..169171 FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold, FT score 1.7e-21" FT CDS 169231..169647 FT /transl_table=11 FT /locus_tag="BPP3696" FT /product="conserved hypothetical protein" FT /note="Similar to many eg. Streptomyces coelicolor FT conserved hypothetical protein sc9c7.14C SWALL:Q9ZBJ6 FT (EMBL:AL035161) (132 aa) fasta scores: E(): 1.8e-08, 35.55% FT id in 135 aa" FT /db_xref="HSSP:1JD1" FT /db_xref="InterPro:IPR006175" FT /db_xref="UniProtKB/TrEMBL:Q7W4G7" FT /protein_id="CAE38979.1" FT /translation="MSTELQYMNPEGACPAQGLYSHATRVPAGENTYFIAGQLSVAPDG FT SVAGKGSFETQFRQVFKNLADVLHGLGLSHKHLVKFTTFLVHSQDIETFMKLRAEYFPT FT IFPGSLPPNTLLIVDRLVKEEFLLEVEAIAYQPA" FT misc_feature 169258..169638 FT /note="HMMPfam hit to PF01042, YjgF family, score 5.5e-18" FT CDS 169660..170694 FT /transl_table=11 FT /locus_tag="BPP3697" FT /product="putative dioxygenase" FT /note="Similar to Burkholderia sp. RP007 extradiol FT dioxygenase PhnC SWALL:Q9ZHH5 (EMBL:AF061751) (275 aa) FT fasta scores: E(): 2.1e-10, 29.21% id in 332 aa, and to FT Escherichia coli O157:H7 2,3-dihydroxyphenylpropionate FT 1,2-dioxygenase mhpb or b0348 or z0446 or ecs0403 FT SWALL:MHPB_ECOLI (SWALL:P54711) (314 aa) fasta scores: E(): FT 8.9e-08, 24.53% id in 322 aa" FT /db_xref="GOA:Q7W4G6" FT /db_xref="InterPro:IPR004183" FT /db_xref="UniProtKB/TrEMBL:Q7W4G6" FT /protein_id="CAE38980.1" FT /translation="MAKIVAGIGMSHAPGALGWQDAPSASVRRRLLQAADRLGRSLDAA FT RPDVIIAFLDDHFENHFRSLMPTVGIGVADSHPGPATQWLEALRLTRQERFGGAPEIAE FT RLLRSLVADGYDVARMGEIEYGNNLMVPWKLMAPRSAPAIIPVFTNVFSPPVMPYRRAY FT AFGAALRNAAEALDADLRVAFMATGGMSHWPPFWNDSSPEADAFLARMKAFQTHGKSVL FT EKDPHLLRDLAAYEIEMAERNQWPLNSPHPLVNEAWDRQMLDALARGDVEFLCGLQYED FT VKRDGGHRGQEIINWIELMGAMKGAPATLLEYEAVTEWICGMAYMDYGVAQAWPVNPLI FT KEQE" FT misc_feature 169693..170643 FT /note="HMMPfam hit to PF02900, Catalytic LigB subunit of FT aromatic ring-opening dioxygenase, score 1.4e-27" FT misc_feature 170296..170319 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 170691..171572 FT /transl_table=11 FT /locus_tag="BPP3698" FT /product="putative enzyme" FT /note="Similar to many predicted enzymes eg. Bacillus FT halodurans 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase FT bh2000 SWALL:Q9KBC8 (EMBL:AP001514) (319 aa) fasta scores: FT E(): 1.2e-31, 41.72% id in 290 aa, and to Streptomyces FT coelicolor putative 2-hydroxyhepta-2,4-diene-1,7-dioate FT isomerase SCF41.05 SWALL:Q9RJW4 (EMBL:AL117387) (292 aa) FT fasta scores: E(): 4.2e-25, 37.96% id in 295 aa" FT /db_xref="GOA:Q7W4G5" FT /db_xref="HSSP:1GTT" FT /db_xref="InterPro:IPR002529" FT /db_xref="UniProtKB/TrEMBL:Q7W4G5" FT /protein_id="CAE38981.1" FT /translation="MKFASLDYQGKAQVAILDTEAGVFWPLSGLLRDEGDLVELISAWD FT SVHQRIAPSGAGIALDRATILAPISSPRRNIFCVGKNYHEHAAEFQRSGFDSSAKDGEH FT APEAPVVFTKPASAIVAPGAVIPRHAQVTQQLDYEADLAVVIGKAGQGIKKADAMSHVF FT GYTIINDVTARDLQKLHRQWFIGKSLDGFCPMGPYIVTADEVDGQALDVRCWINDELRQ FT NANTRQLIFDIPTLIETLSAGMTLQPGDIIATGTPAGVGIGFTPPRFLQSGDRVRIEIA FT GLGVLENTVGNE" FT misc_feature 170991..171485 FT /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA) FT hydrolase family, score 5.1e-80" FT CDS 171854..172147 FT /transl_table=11 FT /locus_tag="BPP3699" FT /product="conserved hypothetical protein" FT /note="Some similarity to Pseudomonas putida hypothetical FT 22.4 kDa protein SWALL:Q9R9U3 (EMBL:AJ245436) (199 aa) FT fasta scores: E(): 3.7e-15, 74.62% id in 67 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W4G4" FT /protein_id="CAE38982.1" FT /translation="MKMLPASCRQWFLKEIEGLFVPVLLLAREMKLLKLRHIALDGTKI FT KANASKYKALSWGHANRIAGQLREEVRGKEPQPPPSALALIIEIKSKVQYIP" FT CDS 172177..173148 FT /transl_table=11 FT /locus_tag="BPP3700" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2847" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q7W4G3" FT /protein_id="CAE38983.1" FT /translation="MTRRQQRKSRMTPRLLAVAVSGLCVSGCETTPGGSSAAPDAYASV FT PSASGQLRSLGPVPDPAAALQARALRDINHLLTQGEALFAPGQGVSCPVSYPLEAVNRR FT LRANGSPEEAPPLVYALNVVSGACPSQGSSAEDFKFEGPVDYILVTHKRKKTTGDDHDD FT ILLQERRVGVYAGGMPVGEHKEFGHALHKHYRRLFSGEIMEMRAAGRDASKPMYSVYYQ FT SYGGGGAPELAGTPVGGTVDFFSPDWLAQPLKTTITVAAYPDASRRVVTIYEDGEPVRR FT FRARKMDGQYVLHGWYEYLKPRGNSVCYQHAVQIHATECADL" FT misc_feature 172177..172287 FT /note="Signal peptide predicted for BPP3700 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.888 between residues 37 and 38" FT CDS 173157..174332 FT /transl_table=11 FT /locus_tag="BPP3701" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2846" FT /db_xref="UniProtKB/TrEMBL:Q7W4G2" FT /protein_id="CAE38984.1" FT /translation="MTMQCKNKISAGLILLACGVLAGCMGDHDPYAGYAPAERAKLEAD FT DNARLAAFHQQFTQEKANNAALETVADEMLAYRMRSGDTSLFEGVRVRGDFDRFDGQMS FT LVLDAYTHKLALTYHKGTYHSSPASTYLGPASGLNQAPAGFNGQYQGDFNMFLQAPSEL FT DQELELTDPAIRTGSYVMIGTFVRHDGVREPGIYVADFANGNHALKFTRATPAYLAQME FT QRYADQVASFRESERRRRQAEASGGGDGFGALLALGLGGLILSSADIPGADVAQIGAAL FT FQDVMTDGQTQALAAIARSGRGAYAPSTLDGAAVASAGNTPARGGAERTQQYRVTCPAG FT HSSTVPIPYKSASCLAAKQEMARVYACNLVGEFEQVARQCAQGCGSPQCVE" FT misc_feature 173157..173225 FT /note="Signal peptide predicted for BPP3701 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.931) with cleavage site FT probability 0.369 between residues 23 and 24" FT misc_feature 173196..173228 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 174329..175972 FT /transl_table=11 FT /locus_tag="BPP3702" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2843" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q7W4G1" FT /protein_id="CAE38985.1" FT /translation="MNIIHAARRLALVALASLALSGCETLTNMATSVRDAFAPAPQSDA FT AVEAPPAPGTSVADSSAGPADESAEDPLAPGFLHFVLPDSPWGTEGWRFEALAAKSTAG FT FIPLQSDARLGYHLKLTLWPDQYQVRVSLRGDTRLSQWVTVEAGRHTVIHVDLGVVTDD FT VLVLHGEDALKRLAESLALSRDLGLAQTFSPFRLIFDGGLEGRWHGPRSDGQARGTGRL FT ELFRAQSRVARLENAQALPGARSGFEGVPVFDDGRQVAGRWQGRSLAEGSVMRFPDGRV FT FQGGYTGTEPDTGKLTLTDGRTWTGKVSNGQPTGNGDLTLPDGTVVHDVPGIDESAFDG FT EYECTAPSGRAVNCAYFEGERQASLAQYKRRDKARQAATAREVAQARELAEVARQTQPA FT SRTDPMSKQGLAAAVAAAQENQARHQDAPAVDGKLDRPQLSNAARAASGCARVEGRFST FT TTGLSKVSFDAGGRGHFWQKTYGGARAYTFDVDFRWTSTDSKMTFDYDEAVYRDAAGNE FT MQRTRMPGGTVACSYDGRELSIGGVSYFRL" FT CDS complement(176011..176163) FT /transl_table=11 FT /locus_tag="BPP3703" FT /product="hypothetical protein (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2842" FT /note="No significant database matches. Contains an FT internal deletion relative to B.bronchiseptica gene." FT /db_xref="UniProtKB/TrEMBL:Q7W4G0" FT /protein_id="CAE38986.1" FT /translation="MPEHGTRTGPGGSDESKSALVLDIFQGKTIVAEASPQYDLSPSEV FT EQYEL" FT tRNA complement(176289..176364) FT /note="tRNA Lys anticodon CTT, Cove score 88.69" FT CDS complement(176481..177221) FT /transl_table=11 FT /locus_tag="BPP3704" FT /product="putative short-chain dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2841" FT /db_xref="GOA:Q7W4F9" FT /db_xref="HSSP:1Q7B" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W4F9" FT /protein_id="CAE38987.1" FT /translation="MAALDGKVAFITGASRGIGAAIARRLAADGADIALTYVSAADKAH FT ALVEELRATGRRAHAYAADAADAGQVREAVARAAADLGRLDILVNNAGIFLAGPVEDIS FT ADDYDRSMDINVRAVFVATQAALPHLGEGGRIVNIGSCLAGHTGRPGVALYAAGKAAVA FT AFTRALARELGPRGITANVVHPGPIDTDMNPAGTDQAAALVQMLAVPHYGEPADIANMV FT AYLAGPQARYVTGAEISVDGGYAA" FT misc_feature complement(176490..177209) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 2.8e-87" FT CDS 177325..177945 FT /transl_table=11 FT /locus_tag="BPP3705" FT /product="putative TetR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2840" FT /db_xref="GOA:Q7W4F8" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q7W4F8" FT /protein_id="CAE38988.1" FT /translation="MAERGRPRSFERTEALRQAMEVFWSKGYEGASLADLTSAMGINAP FT SLYAAFGSKEALFREAVQRYADTEGARTRRALLEAPDARAAIEGMLLAGAQTCTLNGKP FT PGCLMVLGATAGPAQHAPVRGWLGEHRRDMQALILRRLEQGRRDGEIGPDADLAALAAF FT YATVLHGMSIQARDGADRAALQAVARQAMHAWEALARPPAAAR" FT misc_feature 177367..177507 FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 9.1e-12" FT CDS complement(177947..180157) FT /transl_table=11 FT /locus_tag="BPP3706" FT /product="exported protein, conserved" FT /note="ortholog of Bordetella pertussis (BX470248) BP2839" FT /db_xref="InterPro:IPR007844" FT /db_xref="UniProtKB/TrEMBL:Q7W4F7" FT /protein_id="CAE38989.1" FT /translation="MTRKKKIFLGVAGAVLVLLAAVLVVLATLDWNRLKPTINEQASAA FT LGRPFAIQGDLSVQWAREPGQGGWRGWVPWPHFVVHDVAIVNTVWARDPNLLTLRRGEF FT RLAPLPLLRQRVVIRRIQLSGLRADLQRRADGVANWEFTMPDTGEPSPWKVDIDAIGFD FT QGAIRYADAIAQADLDVLADPLGKPVPFAELAGAPAAGGAADQAAGKAAGKADSGKADS FT GKADSGKADSGKADSGKADSGKADSGKAADAAAPAAPPDYAFGWQVNGRYKDLPLEGTG FT KVGGMLALRDARQPFPVQAEVAIGSTRIAVAGTLTDPMSLGALDLRLKLASASMANLYP FT LTGVTLPDTPPYSTDGRLVARLQDPQGARFEYRDFNGKVGASDLHGDITFALQQPRPRL FT SGKLSSRLLRMADLGPLIGVQSGGAKSVKAEGEKAVAQPADKVLPVQEFRTDRWRVMDA FT DVELRGERIVHSDRLPISDLTAHVLLDDGVLTLAPLRFGMAGGSLDATLKLDGRQAPMS FT GNVRLAVRRLRLKQLFPNVQAMQKALGEVNGDVAISGQGNSVAALLGSASGETKLLVND FT GVISRALMEIAGLNVGNYVVSKLFGDDEVKINCAAADMGMTRGVMTPRVFVIDTENAVV FT NITGSIDFRKELLNLDIDPDSKGFRLFSLRSPLYVKGSFKKPDAGVHVGPLAARGAGAV FT ALGILLTPAAGLLALIAPSTSDDNHCATLLTEMRKPAQAPRR" FT misc_feature complement(180071..180136) FT /note="1 probable transmembrane helix predicted for BPP3706 FT by TMHMM2.0 at aa 7-29" FT misc_feature complement(180077..180157) FT /note="Signal peptide predicted for BPP3706 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.702 between residues 27 and 28" FT CDS complement(180302..180961) FT /transl_table=11 FT /locus_tag="BPP3707" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2838" FT /db_xref="GOA:Q7W4F6" FT /db_xref="HSSP:1P7M" FT /db_xref="InterPro:IPR005019" FT /db_xref="UniProtKB/TrEMBL:Q7W4F6" FT /protein_id="CAE38990.1" FT /translation="MLASVVPELAFLSPRIMDPRTDFADGLTRCGWLDHSVDYVAYHDH FT EWGRPQADDRALFEQLSLEGFQSGLSWRTILNKRAAFRRAFADFDMERVAAFDERRVEA FT LLQDAGIVRHRGKIEAVINNARRALALRDREGSLAAFFWRYEAPPRGADAPFEVLACTA FT EFEALSKALKKQGWSFVGPTTVYAFMQSVGMVNDHHPQCHHHAACEQARYRFQRPD" FT misc_feature complement(180341..180868) FT /note="HMMPfam hit to PF03352, Methyladenine glycosylase, FT score 1.4e-78" FT CDS complement(180993..181457) FT /transl_table=11 FT /locus_tag="BPP3708" FT /product="putative MerR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2837" FT /db_xref="GOA:Q7W4F5" FT /db_xref="HSSP:1Q06" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:Q7W4F5" FT /protein_id="CAE38991.1" FT /translation="MMRSAQAVRRPDLLSVGEVAARTGLAVSALHFYEAKGLIASTRTA FT GNQRRYARAVLRRVAVIRVAQRMGLPLAAIAQALATLPTSRAPTVADWRRLSRAWRQEL FT DQRILGLTQLRDQLDGCIGCGCLSLRECPLRNPDDAMARLGAGPHFPPHE" FT misc_feature complement(181305..181409) FT /note="HMMPfam hit to PF00376, Bacterial regulatory FT proteins, merR family, score 8.6e-12" FT misc_feature complement(181341..181409) FT /note="PS00552 Bacterial regulatory proteins, merR family FT signature." FT CDS complement(181970..182722) FT /transl_table=11 FT /locus_tag="BPP3709" FT /product="putative DNA-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2836" FT /db_xref="GOA:Q7W4F4" FT /db_xref="InterPro:IPR005471" FT /db_xref="UniProtKB/TrEMBL:Q7W4F4" FT /protein_id="CAE38992.1" FT /translation="MAPFSICVSILLLVGDSNRAGVTARYVSEQLGLSLSTAYRWIDML FT RQSGLVVRHPNTRKLHLGPVAFDLGVQAVARPYVPPAIEEVLKPIASRHACRLHLVRCS FT GDYSVLQRTYFDRAELEIVPSKVAAMRLLGIGPAGVCLLSRWPDYEIDRYLVRNQDGLL FT AAGYQGADIRERVRQCRKLGCFVTRSVLTPGYTAVAIDFEVDGVVYGVSAASAGSEGGK FT QFHAIREALDRARASLATQAIPEFALHG" FT CDS complement(182729..183991) FT /transl_table=11 FT /locus_tag="BPP3710" FT /product="ABC transport protein, Solute-binding component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2835" FT /db_xref="GOA:Q7U371" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q7U371" FT /protein_id="CAE38993.1" FT /translation="MMKRVASLLVSSLLYSGCAMADGSIVVWMTDSRPGYKKWLETEAA FT AFKAKHPGVKVSVVQMSPNDAYLKIPAAAAAGGLPDVIWTTYGLAPWLDGMKGGKLADV FT SDLIDRLGKNRFDEDALKQWSYRGAVACVPVARTPTYLMYRADLFKKAGLAAPESWEDV FT IRAAQKLNDPANGKYGIAMPGKTDFSPRFAYGMILYSMGGSTFDAQGNPIFESPASIDA FT LKVYKQLYAYSPPGSLNFGFSEIQRALAQGRVAMTISNPSSMATFQRTNRDEGSTLALA FT LPGKVNRTIQNQRGWCIADGKNSQDAKAFVEHLFSTSSFAAYLDAASISSFPVYHDQAA FT YDQFQASNETVKRFPGATDFIRRHTVGTMPGIDGVGLTPKSGDLISSGQIESAINRMLA FT NDMSEQETAAAMQKETLRLLN" FT misc_feature complement(182765..183898) FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding protein, score 9.9e-43" FT misc_feature complement(183434..183457) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(183905..183970) FT /note="1 probable transmembrane helix predicted for BPP3710 FT by TMHMM2.0 at aa 7-29" FT misc_feature complement(183929..183991) FT /note="Signal peptide predicted for BPP3710 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.997 between residues 21 and 22" FT CDS complement(184033..185295) FT /transl_table=11 FT /locus_tag="BPP3711" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2833" FT /db_xref="InterPro:IPR004792" FT /db_xref="UniProtKB/TrEMBL:Q7W4F3" FT /protein_id="CAE38994.1" FT /translation="MDIPQDSYDLVVVGGGTSGVFAAISAARRGLRVALVEASGMLGGT FT LTQVTLGGICGAWTGTAHTQVVHGLFDEFVHAMRKAQACDGLYSYGHVTALPYEPVKVR FT YLLDQLLPPNVTAFFHSRLFAVDMEGERIARVHLAGVEGPFSLAARAYVDATGNASLVG FT LCATPLRRGENGTVQAASSMFRVIGADVDPRVRDVRTEIRLAIEKHNASGQAEAFKRSA FT VAVYVHPDQRLLHFNATRVYFESTADDALAAALDMSRVETEARKESFRLVELLKREVDG FT FANIEIVDLGSSVGVRDSRNIVNDHPLTEAMVRDGDKPANSVAYSAWPIEFHGSNTQTH FT WEPLEGDRYYGIPYESCLPQGIQNALVIGRAISSTPLAQASCRVTAPCIQMGESAGIAA FT HELVASSSRTAFSELASMKFI" FT CDS complement(185300..186427) FT /transl_table=11 FT /locus_tag="BPP3712" FT /product="ABC transport protein, ATP-binding component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2832" FT /db_xref="GOA:Q7W4F2" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W4F2" FT /protein_id="CAE38995.1" FT /translation="MKSTSTAIQLNSVSKSYGGSPILDDISLAIAPGEFVVILGESGCG FT KSTLLKIIAGLEQPTSGAVRIGDAVMTDVPPKDRRLAMVFQSYALYPHLKVWENISFPI FT KMSLWKYAYSLPLFGRLFPNRKRILNTMREAAERAAGKVRLTPLLDRKPRALSGGQRQR FT VALARAIVDGREICLMDEPLSNLDAQLRASTRREIADLHRDLGHTIVYVTHDQTEAMTM FT GTRVILMREGRIEQDGAPAELYEQPATTYAAEFLGSPRINFMRVASAQFSQAAAQAVVT FT LGDGRCPLDPHGDLLIGVRPDHLEITPDAQGEFLFLSSEYLGGKTIVSLKRESGETMVQ FT AFGSDRLDRAQRYSVRFEGRHAMCFDPQSGRRIRE" FT misc_feature complement(185732..186331) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.9e-52" FT misc_feature complement(185918..185962) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(186287..186310) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(186438..187265) FT /transl_table=11 FT /locus_tag="BPP3713" FT /product="ABC transport protein, inner membrane component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2831" FT /db_xref="GOA:Q7W4F1" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W4F1" FT /protein_id="CAE38996.1" FT /translation="MRIINRFPLPAAMAWLVGAVLFVPIAWMVLTAIRPEHELYQVPLR FT ILPGALDMANIQSAWYEKSFGQFFFNSAVNSVLSVLFSMPIGILAGYAFSRFEIRHSKY FT YRAYVLFAYMVPIIILVVPFYLIAVWLNIYNTRMGHVLGLSTYAIPFATWVMIGYFEQL FT PKEVEHSAAIDGADRMKTLIYILAPMIKPGVVATALLTFILAWDDYIFALILLDSETLR FT TLPLAIGYLSSDYELTDGLMMAMGTITTLPILLLFVFFQKYFVGGMTSGAVKG" FT misc_feature complement(join(186486..186542,186654..186719, FT 186783..186848,186879..186944,186981..187046, FT 187179..187244)) FT /note="6 probable transmembrane helices predicted for FT BPP3713 by TMHMM2.0 at aa 7-29, 73-95, 107-129, 139-161, FT 182-204 and 241-260" FT misc_feature complement(186567..186791) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.5e-11" FT misc_feature complement(187182..187265) FT /note="Signal peptide predicted for BPP3713 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.921) with cleavage site FT probability 0.563 between residues 28 and 29" FT CDS complement(join(187252..187536,187538..188119)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP3714" FT /product="putative ABC transport protein, inner mebrane FT component (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2830" FT /db_xref="PSEUDO:CAE38997.1" FT misc_feature complement(join(187283..187348,187457..187522, FT 187586..187651,187748..187813,187853..187918, FT 188015..188080)) FT /note="6 probable transmembrane helices predicted for FT BPP3714 by TMHMM2.0 at aa 13-35, 67-89, 102-124, 156-178, FT 199-221 and 257-279" FT misc_feature complement(join(187357..187536,187538..187591)) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 4e-11" FT misc_feature complement(188036..188119) FT /note="Signal peptide predicted for BPP3714 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.995) with cleavage site FT probability 0.722 between residues 28 and 29" FT CDS complement(188116..189489) FT /transl_table=11 FT /locus_tag="BPP3715" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2828" FT /db_xref="GOA:Q7W4F0" FT /db_xref="InterPro:IPR005656" FT /db_xref="UniProtKB/TrEMBL:Q7W4F0" FT /protein_id="CAE38998.1" FT /translation="MTSSAPLIDFAHDLRYEDIPVHVRSIVREQIIATVGSILGGAQLP FT VAKSFEQSILATFGRGESSAFGAGTGMSAASAALYNSGLAQLLDWEDWVLISHVGAAVV FT PVAWALAEERGLRLNDVIVAVTIGNEIAGRTSRAIQRGAYLGNGLPNHQIELPLVAGRL FT LGLDRRQLGYALGHSCYMAMENCPVGWTTDSKLLVNGLPAMWAIASANMARQDIVGRGD FT IVEHPAGYLATVSESIDFKELTRDIGVKWYTETLSTKKHAGCAYNLPAAECAMSIREEI FT APEDVERIVVECSTAMLYVGGRYDDFEPGVLDAYEQGLLTHVGLCFDTKFCVAAAYVHG FT DLIHEQYLVENATDARVKALYGKISLVPSERLQKAQFQDFKYGATVTVHGRDGRTATRT FT VEQMLGGYDRPFDHATKLADGARGLLPPEAVDGIVARLRDETGNPLASEISTLINGAP" FT CDS complement(189486..189890) FT /transl_table=11 FT /locus_tag="BPP3716" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2827" FT /db_xref="UniProtKB/TrEMBL:Q7W4E9" FT /protein_id="CAE38999.1" FT /translation="MPCRVVPNTPAIFCHGKRAMFFEDIERIRSALQRSGRKYLTPRLE FT AVLGTVYQLKRGEESVYLCVEPSMVVREHAHRPHCTIQLGAPDWDTVLSGERSIMSKVL FT AGKCGFLKHERRYIMHFSMLLQAVLLEEKQ" FT CDS join(190259..190645,190649..191245) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP3717" FT /product="putative exported protein (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2826" FT /db_xref="PSEUDO:CAE39000.1" FT misc_feature 190259..190339 FT /note="Signal peptide predicted for BPP3717 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.903 between residues 27 and 28" FT misc_feature join(190412..190645,190649..191233) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 2e-80" FT CDS 191260..191970 FT /transl_table=11 FT /locus_tag="BPP3718" FT /product="putative GntR-family transcriptional regulatory FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2825" FT /db_xref="GOA:Q7W4E8" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4E8" FT /protein_id="CAE39001.1" FT /translation="MSSTKRPASRADEITQELVRMIQLADARRIAKLPTEMELAAQLGI FT SRPVIRESLSRLESLNMVTRRQGSGLYIVAPEKRSPEALVLLEQSAPLSPRSIAEAMSV FT RAILELETGRLAALNHRQVDLDRMAAEIERLAATGARGLEAAEADEAFHRALSDAAGNV FT TLSQVLDLFLRLSWRRRVEYFSQPKLGKQSIIEHQEILNAVASGDPDAVSTAIRTHLNS FT AERFWDSKYVKKKS" FT misc_feature 191299..191478 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 3.2e-15" FT misc_feature 191356..191430 FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT CDS 191967..193211 FT /transl_table=11 FT /locus_tag="BPP3719" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2824" FT /db_xref="InterPro:IPR007506" FT /db_xref="UniProtKB/TrEMBL:Q7W4E7" FT /protein_id="CAE39002.1" FT /translation="MILTDEQQGLLNGDAGDVVAKYFTWLVEWGRLMGAQRLVKVDSVH FT TSGITAQGRVAGAVSPEARKKTLEQVIEFTSVRMRAPTATHVARVCVEDDKGGGLSAED FT QAFQKLVIDRARDAGIQLTWTCAPYIAGILPSKNQICAWTESSAVVYINAMVGARSTRN FT GTESAIAAAMSGWFPEFGVLLEENRQADLIVEVEAAPSEELCDWGFLGYFAGEVSGLRT FT PVLDQLRAPSLEEAKQLSAAVATGGGCTMFHIAGVTPEAPTLDAVARRPLSRIHYRAAD FT RTRIAAKLNTLTSERIDYVVLGCPHATLHEIQVIASQLEGRRVCPSVRLEVWTAWAVRA FT VAQRMGLVDVIERAGGKVLTDSCPSITRSGHGRRMVTNAVKQGNYLQGMTGHEVAVGKL FT TDLVSAALTGTWQGL" FT CDS 193213..193647 FT /transl_table=11 FT /locus_tag="BPP3720" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2823" FT /db_xref="InterPro:IPR012016" FT /db_xref="UniProtKB/TrEMBL:Q7W4E6" FT /protein_id="CAE39003.1" FT /translation="MLTIDTASRTFHCKTWVTGQTQGKAVIARERISFWGGFDPQTGRI FT VDPYSSLRGRDISDCVLILLSSKGSSGTSGMLSLATRAGHAPAAMIQVEMDPVTVMGCL FT VNNIPLLQATGFDPFEQIQDGDLVRIDGENGTITLAPGQA" FT misc_feature 193243..193629 FT /note="HMMPfam hit to PF01989, Protein of unknown function FT DUF126, score 1.6e-10" FT CDS 193676..193981 FT /transl_table=11 FT /locus_tag="BPP3721" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2822" FT /db_xref="GOA:Q7W4E5" FT /db_xref="InterPro:IPR007138" FT /db_xref="UniProtKB/TrEMBL:Q7W4E5" FT /protein_id="CAE39004.1" FT /translation="MSQPYLQVIAHYHAQPGAQEQVGALLARLAEHTRTEPANLYYEYF FT QSGSDPCHFVILEKYRDMHGLDEHRQTAHFQAIGIGQIIPLLARREVESHMVTPDS" FT misc_feature 193688..193975 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02619, Uncharacterized ACR, YneC FT family COG1359, score 1.8e-08" FT CDS complement(194039..195187) FT /transl_table=11 FT /locus_tag="BPP3722" FT /product="putative alcohol dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2820" FT /db_xref="GOA:Q7W4E4" FT /db_xref="HSSP:1O2D" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:Q7W4E4" FT /protein_id="CAE39005.1" FT /translation="MFEFCTHARTLVGAGASDALGETLAARWGASRVLLVTDGALVSLG FT LAGRLRDALASAGHTVAMFDEVVADPPESVVERAIIAARDARAQVIVGFGGGSSMDVAK FT LAAAFAGTTQDLRQAYGIGLVAGPRLPLVQVPTTAGTGSEATPIAVVTTGDGAKAGVIS FT PVLYADLAVLDATLTLGLPPAITAATGIDAMVHATEAYTSRVLKNPISDALAREALRLL FT FRALPLACRDGGDLAARQDMLLGAMLAGQAFANAPVGAVHALAYPLGSAFHVPHGLSNS FT LVLGPVLRFNSLRCETQYAELADVILPGYADGVAEKAAAFVQAMAEVAGALELPTRLAQ FT VGVTAADIPALAGLALQQQRLLGNNPRDVTLADATRLYEEAF" FT misc_feature complement(194066..195166) FT /note="HMMPfam hit to PF00465, Iron-containing alcohol FT dehydrogenase, score 1.3e-90" FT misc_feature complement(194591..194677) FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1." FT tRNA complement(195481..195556) FT /note="tRNA Lys anticodon TTT, Cove score 94.70" FT CDS complement(195686..196483) FT /transl_table=11 FT /locus_tag="BPP3723" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2818" FT /db_xref="InterPro:IPR004478" FT /db_xref="UniProtKB/TrEMBL:Q7W4E3" FT /protein_id="CAE39006.1" FT /translation="MSTKFLKTLAAFALGAAVFAQPALAQDKPLKIGVTAGPHAQIFEV FT VKQEAAKQGLNIQVIEFSDYVQPNVALASGDLDANSYQHQPYLDNANADRGYKLVSIAK FT TVIFPIGVYSKKVKNLNELKDGARIGIPNDPTNGGRALLLLQEHGLIKLRPEAGLKATP FT IDVVENPRKLRFIELDAAQLPRSLDDTDASAVNTNFALEAGLDPSKDALVRESAESPYA FT NVLVVREQDKDRADLRKLVSIYQSAPVKEFILGKYKGAVVAAW" FT misc_feature complement(195692..196399) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03180, NLPA lipoprotein, score FT 4.2e-134" FT misc_feature complement(196409..196483) FT /note="Signal peptide predicted for BPP3723 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 25 and 26" FT CDS complement(196531..197130) FT /transl_table=11 FT /locus_tag="BPP3724" FT /product="ABC transport protein, inner membrane component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2817" FT /db_xref="GOA:Q7W4E2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W4E2" FT /protein_id="CAE39007.1" FT /translation="MVGVSGAISVVVGIPLGVLLIVTGRGGMLQNLAVNRVLAAVVNGT FT RSVPFIILMVAIIPFTRLLVQTSIGTTAAIVPLAVAAIPFMARVAENAMREVDPGLITA FT ARAMGASPLQIICKVLLLEALPGLVAATIVTIVSLIGYSAMAGAIGGGGLGDLGIRYGY FT QRFLPEVMLAVVVVLIALVQVVQSLGDWLVRRMSHR" FT misc_feature complement(join(196567..196632,196693..196758, FT 196876..196941,196954..197019,197059..197115)) FT /note="5 probable transmembrane helices predicted for FT BPP3724 by TMHMM2.0 at aa 5-24, 37-59, 63-85, 124-146 and FT 166-188" FT misc_feature complement(196642..196854) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.2e-14" FT CDS complement(197141..198229) FT /transl_table=11 FT /locus_tag="BPP3725" FT /product="ABC transport protein, ATP-binding component" FT /note="ortholog of Bordetella pertussis (BX470248) BP2816" FT /db_xref="GOA:Q7W4E1" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR018449" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4E1" FT /protein_id="CAE39008.1" FT /translation="MIHIENLSKTYATPHGRFEALRGINLHIQQGEVFGIIGPSGAGKS FT TLVQCINLLERPDQGSIAIGGQALVGLGEAQLRNQRRRIGMVFQGFNLLARRTVYGNVA FT LPLEIAGVARAEIPARVERLLALVGLEHLRDRYPSQISGGQKQRVGIARALANDPDVLL FT SDEATSALDPETTHNILALLRDINRKTGVTVVMITHQMEVVREICDRVAVLSHGEVVEL FT GSTREVFAAPRHEVTRAMVSAATASDLSEATLAAVKQRIDALAAAEPGRAVRLWRLSLK FT GVAAGEPLWSDLAREFALDVSLVQARVEDIQGVAVGTLFVLAQGAPHAVKDALAALAAR FT EITVEEIAHEPATDRSAYHVAA" FT misc_feature complement(197579..198139) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 8.8e-70" FT misc_feature complement(197765..197809) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(198095..198118) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(198394..200619) FT /transl_table=11 FT /locus_tag="BPP3726" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2815" FT /db_xref="GOA:Q7W4E0" FT /db_xref="InterPro:IPR000322" FT /db_xref="UniProtKB/TrEMBL:Q7W4E0" FT /protein_id="CAE39009.1" FT /translation="MPPKFDFAHTTQLDTVELLTSRPSRIDFDAGDGLHLVVEAHAPGV FT YRLRCGEASLLTDEKSSARARAVAEMLLARQEAVGEATLTPRDDGGGWRIAQGDTTLEV FT LSDPVRVKLYRGDQEVFASEVSAHTPAFGHNALDETDEAVWTVGLGLEGAEPVYGLGET FT PGDLNRRGEAVVSDDPEHRALPLAWSPRGWGVYANTMRRVEHAVGLEPAEGAYVLTIDD FT PVLDLFLFVGEPAEILNQYTALTGRAGQPVLWAMGAWLQQADGQMPTETAALVARLRDQ FT QIALDAVTLALPAAWSFQADKPVLEWDAQRFPDARQMLALFHKHHVHVAASGFPGVLKS FT SLLFEELEDRGWLLTRDDGSAQVFDGNAATGGQPYGLLDLSYRDAYAMWVERHRQLIED FT GLDAPACDAQIAIPDGVSARNGETGPALRTMYPLLARRALFDAVAGLKVPPEGVVPSTD FT LFPAAQRLPWQVGPRVTNDWAGLEHSLRTALSIGASGVPVQVHALGSAQAPLEGMTAEL FT YLRWLGACVLSANFSFQGVPGLLPDAFGEEALAHARTWMQWRYRLIPYVLGAIEDSART FT GLPVQRSMAMSFPHDPHAHAWDLQYLLGPALLVAPVTQPGKQVRVYLPKGDAWWDLNTG FT HRYEGGTTWTVECELDRYPVFGREGHMLCLGPAAQHTGEFNSARILDEVWMFGMPVHNP FT VVMRNKIRVMQMQGSSYIKGLEGLRILPSEGLEVKRRGAEVRISRAR" FT misc_feature complement(198409..200364) FT /note="HMMPfam hit to PF01055, Glycosyl hydrolases family FT 31, score 1.4e-10" FT CDS complement(200914..202812) FT /transl_table=11 FT /locus_tag="BPP3727" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2814" FT /db_xref="GOA:Q7W4D9" FT /db_xref="InterPro:IPR017610" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4D9" FT /protein_id="CAE39010.1" FT /translation="MNSRIFPAAMSAPYAPLQPAVVVHDEQGRLYSAAYGDVYHSRDDA FT AGQAEHVFLRGNGLPQRWRGRARFTVCETGFGMGLNFLTLWQAWRDDPARPRRLHMLSL FT EGHPFAREDLLAVLRAHAPAGLQALATQLAAQWPPLLPGLHRLEFEGGALTLTLGFGAA FT QQLAPRLTARVDAYFLDGCAPRGNPAMWDPHMLQALARLAAPDATLASWCSAGQVRQAL FT QQAGFAVRRAPGFGGKWHMTLGQRLPGVATPDDAPDDDGAPVLVVGAGLAGAAVAHALA FT LRGRAVTVLDAARLAGLASHAGHAAAALTPVIARDDNPRARLSRAGSQRAWLRWRDLPA FT PAAPRRCGTVQLERDAGRAAALAQTLQILQFPADWVRMVDRDQAGALAGLPVARGGVFF FT ADGMLVRPGALIDALLAGEGISTIAAQAARLRRHGAQWQVLDAQGRQVAQAPVVVLANA FT ADAPRLLADSGLLEPLPRLARMHALAGEVTLLPAEALSGGPRCVVGGEGYLLPAVDGWC FT VAGSTYVHGAAQALTGAEGQRVNLDKAAGLLGQAPAAFASLQPGSLPGWAGWRAVLPGR FT LPAAGPLAHAPGLWLAAGYASRGLSWAALMGDVIAARLCGEPGPLETDLLAQIAPR" FT CDS 202943..203836 FT /transl_table=11 FT /locus_tag="BPP3728" FT /product="inositol monophosphatase-family protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2813" FT /db_xref="GOA:Q7W4D8" FT /db_xref="HSSP:1IMD" FT /db_xref="InterPro:IPR017955" FT /db_xref="UniProtKB/TrEMBL:Q7W4D8" FT /protein_id="CAE39011.1" FT /translation="MQTSAQRSPASATLDLGAAVDAAVTAAHAGAAILQSYAHHRSDLV FT IDRKARNDLVSQADRESEAAVISVLRERTPQFGIVAEETGGAAQGPATWYIDPLDGTTN FT YLHGIPHYAVSIALVAHAGTRVVAGADLQEDTPVIGVVYDPSSEELFTAVHGIGSWLNG FT HRISCSRTSTLDDAVLATGFPFRDFSFAHQYMPMLHDAIRRTRGVRRMGAAALDLAWTA FT CGRYDGYWEMGLAPWDVAAGTLLVREAGGVCTDMMRQQSWPSGGRVVAGNRHIHGALFD FT MVSPHLDAPAPDSSQA" FT misc_feature 202943..203029 FT /note="Signal peptide predicted for BPP3728 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.785) with cleavage site FT probability 0.628 between residues 29 and 30" FT misc_feature 202988..203818 FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family, score 5.9e-73" FT misc_feature 203222..203263 FT /note="PS00629 Inositol monophosphatase family signature FT 1." FT misc_feature 203651..203695 FT /note="PS00630 Inositol monophosphatase family signature FT 2." FT CDS complement(203855..205546) FT /transl_table=11 FT /gene="fadD2" FT /locus_tag="BPP3729" FT /product="long-chain-fatty-acid--CoA ligase" FT /EC_number="6.2.1.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP2811" FT /db_xref="GOA:Q7W4D7" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q7W4D7" FT /protein_id="CAE39012.1" FT /translation="MEANTMLRPWLAHYPAGVPHEISPQDYTSLTDLLDQACRRHAGQV FT ACRSMGSDMTYAQQDAHARHFAAWLQGRGLARGARVALMMPNVPAYLVCLLGTLRAGMV FT VVNVNPLYKADELQRQLLDSGAETIVILENFAHTLQAVPDRGALSHVVVVGPGDLLGGL FT KAPLVNLAARYVKKLVPPWRIDGAHRLPDALRDGARATFTPPALGMDDLAVLQYTGGTT FT GVPKGAMLSHGNLVANVLQTEAVAQPVLHDLHGRQLTIISALPLYHVFAMTVCGLYGMH FT AGMRNLLVINPRDQAALIAAWRQAPVNIFPGVNTLFNALVNNPDFAKLDFTDLRLTLGG FT GMAVQRQVAERWLELTGHPLIEGYGLSETSPVATVNPTDAKTYSGSIGLPLPSTDVAIL FT DDDGAPVPLGERGEVAIRGPQVMLGYWQKPEETRNVMTADGFFLTGDIGIMDEAGYTRI FT VDRKKDMIAVSGFKVYPNEVEAVIAAHPGVLECAVIGVPDEHSGEAVKVFVVKKDPALT FT AEAVLQWCEERLTGYKRPRHVEFRDELPKSNVGKILRRELRPEAGS" FT misc_feature complement(204068..205384) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme, score FT 5.8e-120" FT misc_feature complement(204869..204904) FT /note="PS00455 Putative AMP-binding domain signature." FT CDS 205608..206804 FT /transl_table=11 FT /locus_tag="BPP3730" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2810" FT /db_xref="GOA:Q7W4D6" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q7W4D6" FT /protein_id="CAE39013.1" FT /translation="MKLIEPIVAWRQDIAAIRRDIHAHPELAFEEFRTADVVAARLQEW FT GIEVDRGLGGTGVVGIIRGTREGARAVGLRADMDALPMQEANTFEHASRNPGKMHACGH FT DGHTAMLLAAARFLSQQRDFAGTVYVIFQPAEEGGGGAKRMIDDGLFTRFPMEAVFGMH FT NWPGMKVGQFGLTAGPIMASSNEFAIHIKGKGTHAGMPHLGVDPVMAAVQLAQSLQTIV FT TRNRNPLDAAVLSITQIHTGSADNVVPNEAVMRGTVRTFTLETLDLIERRMGEITRLTC FT AALDCEGELEFRRNYPPTINHPAESAFCAGVMRGIVGAENVNDHVQPTMGAEDFAFMLQ FT DKPGCYVWIGNGSGDHRDAGHGAGPCMLHNGSYDFNDELLPLGATYWVELARQWLARP" FT misc_feature 205638..206594 FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40, score 7.6e-44" FT CDS complement(206818..207696) FT /transl_table=11 FT /locus_tag="BPP3731" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2809" FT /db_xref="GOA:Q7W4D5" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W4D5" FT /protein_id="CAE39014.1" FT /translation="MTPEQLLTFASVADAGNISRAAELLHLSQPAVSGQLRMLQDWFGE FT PLYRRSGHGIVLTAAGERLAEHARQLRQVYSQAGALRDAWRGLETGSLCLGASTTPASY FT LLPGLVAAFRARYPAVGVHLSDGNTRQIVERLPSLDLAFIEGEVPAGLPADTVVHLWRQ FT DEVVAIVRSDHTLAGNGAATLRDLAAWPQVTREPGSGVRGLVERAFASAGLAPAVGLEL FT AGVEGVKQAVRAGLGVGFVSIMSVRHEDGSLATLRLLPRPLTRTLSILAPHASAAARAT FT QRFLDACLALP" FT misc_feature complement(206827..207441) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.1e-43" FT misc_feature complement(207511..207690) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2.7e-19" FT CDS 207803..208849 FT /transl_table=11 FT /locus_tag="BPP3732" FT /product="putative integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2808" FT /db_xref="GOA:Q7W4D4" FT /db_xref="InterPro:IPR018383" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4D4" FT /protein_id="CAE39015.1" FT /translation="MTTTTSTLPLPTPWRDKLNGILFVALMAAAVVQLADLPFIRQFGF FT SPLVVGIVCGMLYGNFLRGTMPADWGAGVHFTARRLLRIAVAFYGLNISIQQIAAVGLP FT GLAVSVGVVASTLLIGTVAGQRLLGLDRDTAMLTAAGSAICGAAAVLAFEPTLRAAPHK FT SAVAVATVVLFGTLSMFLYPVIYHAGWLPFDTQALGIYIGGTVHEVAQVVGAASNIDPA FT TTEVATIVKMTRVALLVPVLLVLGFWLRASAAAGADGKSHAKLPVPWFAIGFLVLAIVN FT SLDILPSDLVTAIRKLDVFVLTMAMTALGIETRFAQIRKAGPRVMALGLVLYAWLVFGG FT YGIVKLAT" FT misc_feature 207803..207904 FT /note="Signal peptide predicted for BPP3732 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.891) with cleavage site FT probability 0.613 between residues 34 and 35" FT misc_feature 207857..208789 FT /note="HMMPfam hit to PF03601, Conserved hypothetical FT protein 698, score 1.5e-115" FT misc_feature join(207860..207919,207929..207988,208094..208162, FT 208205..208273,208292..208360,208388..208447, FT 208505..208573,208601..208660,208697..208756, FT 208766..208834) FT /note="10 probable transmembrane helices predicted for FT BPP3732 by TMHMM2.0 at aa 20-39, 43-62, 98-120, 135-157, FT 164-186, 196-215, 235-257, 267-286, 299-318 and 322-344" FT misc_feature 208562..208585 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 208913..209323 FT /transl_table=11 FT /locus_tag="BPP3733" FT /product="putative thioesterase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2807" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q7W4D3" FT /protein_id="CAE39016.1" FT /translation="MTNPPKSPFTSLPSGREPVLRVMPMPADANIHGDVFGGWIMAQVD FT IAGSIPAARRAAGRVATVAVNAFQFKQPVFVGDLLSFYTSITRTGTTSVTVSVEVYAER FT QRLDAEVVKVTEAVLTYVATDEARRSRPLPTL" FT misc_feature 208925..209314 FT /note="HMMPfam hit to PF01662, Cytosolic long-chain FT acyl-CoA thioester hydrolase, score 4e-31" FT CDS 209334..210806 FT /transl_table=11 FT /locus_tag="BPP3734" FT /product="putative cation transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2806" FT /db_xref="GOA:Q7W4D2" FT /db_xref="InterPro:IPR006668" FT /db_xref="UniProtKB/TrEMBL:Q7W4D2" FT /protein_id="CAE39017.1" FT /translation="MTQSSATPKPPATPRRLDPEDAQHALAEVQECLRRQHLVEDLVHR FT QEQGDDKAHLVEDLVHRQHEAELATLINGLHPADIAFILESLPKDERQTVWRLVSTEHD FT ADVLIEVEDWVRESLIEAMDRQDLVAATGSMDADELADLAPDLPPDVVAEVQKGLTEEE FT RAQLLEAMGYPEDSVGAIMDFEMVRVREDVSLEVVLRYLRRLHELPDHTDQIFVVDRQD FT KLQGVLPIATLLVSEPDTEVRAVMNSDFLTLGPLDSDADAASAFERYDLVSAPVTDEQG FT RLIGRVTIADVVDVIQEDSQEQALSRAGLQEEDIFAPVLMALRNRAPWLLFNLCTAATA FT SFVASRFEDTVSHIVILAFLMSIVAGIGGNSGNQTMTMIIRALAVGRITGRNLWQLVKR FT EMLVTLLVGLCGSLVAALFAWAISDSLSIAVVMMAAMICNMLVGASVGVMVPMLRARFG FT KDPAIGSSVLLTFATDSLGFFIFLGLATIFLL" FT misc_feature 209481..209867 FT /note="HMMPfam hit to PF03448, MgtE intracellular domain, FT score 2e-20" FT misc_feature 209871..210047 FT /note="HMMPfam hit to PF00571, CBS domain, score 0.022" FT misc_feature 210063..210224 FT /note="HMMPfam hit to PF00571, CBS domain, score 3.8e-09" FT misc_feature join(210381..210449,210534..210602,210615..210683, FT 210720..210788) FT /note="4 probable transmembrane helices predicted for FT BPP3734 by TMHMM2.0 at aa 350-372, 401-423, 428-450 and FT 463-485" FT misc_feature 210411..210788 FT /note="HMMPfam hit to PF01769, Divalent cation transporter, FT score 7.2e-07" FT CDS 210912..211460 FT /transl_table=11 FT /locus_tag="BPP3735" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3006" FT /db_xref="GOA:Q7W4D1" FT /db_xref="InterPro:IPR009746" FT /db_xref="UniProtKB/TrEMBL:Q7W4D1" FT /protein_id="CAE39018.1" FT /translation="MTQYFRALAFFLLLVPATAMACDDWPSWARGACQRVDQIWNEGGN FT DLYLTGYSWHNRAMYSSDKIRSFNELAWGGGLGKSIYDEDGDWQGLYAMAFLDSHSDIE FT PIAGYGFQKIGRIGADTRLGIGYTVFLTSRSDIMSRVPFPGILPLVSAGYRDATLYATY FT IPGGKGNGNVLFMFGRWEF" FT misc_feature 210912..210974 FT /note="Signal peptide predicted for BPP3735 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 30 and 31" FT misc_feature 210945..210977 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(211457..212065) FT /transl_table=11 FT /locus_tag="BPP3736" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3007" FT /db_xref="InterPro:IPR006840" FT /db_xref="UniProtKB/TrEMBL:Q7W4D0" FT /protein_id="CAE39019.1" FT /translation="MSLRESAAAADAGAGPLAGSARDLLAQWNGGEDVWVFAYGSLIWR FT PDFAWQERRLATVRGYHRSLCLWSHDHRGSPDNPGLVFGLDRGGCCRGVAFRVAGRDVP FT EVFQALWHREMSGGAYKPRWLRCHTGQAPVRGLAFVPDRRCRHYAGALSDELLIRAVRQ FT AVGRSGACLDYVRETHRALNEHGIVDWRLGALVDRLAQP" FT CDS complement(212247..212717) FT /transl_table=11 FT /gene="grp" FT /locus_tag="BPP3737" FT /product="glutamate uptake regulatory protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3008" FT /db_xref="GOA:Q7W4C9" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q7W4C9" FT /protein_id="CAE39020.1" FT /translation="MGVPVDQTDIKILRLLQKDATCSVAEIAEQVNLSVTPCWRRIQKL FT KDDGVIARNAVLLDPKALGLNLTVFVSIKTNQHNAKWTDNLINAVMSLPNVVEFYRMAG FT DIDYLLKVVVEDMAAYDRFYRRLIEAVDLLDVSASFSMEVIKSTTELPLDAV" FT misc_feature complement(212322..212633) FT /note="HMMPfam hit to PF01037, AsnC family, score 2.1e-42" FT misc_feature complement(212571..212651) FT /note="PS00519 Bacterial regulatory proteins, asnC family FT signature." FT CDS complement(212724..214019) FT /transl_table=11 FT /locus_tag="BPP3738" FT /product="putative D-amino acid dehydrogenase small FT subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP3009" FT /db_xref="GOA:Q7W4C8" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q7W4C8" FT /protein_id="CAE39021.1" FT /translation="MMRVLVLGAGVAGMTAAYYLWRDGHVVTVVERQAGPARETSFGNA FT GGLCPSFAGPWAAPGMVAKVLRMALQRNAPIRFSLAPRPRKLAWLAWLAWLAWLAWLAR FT WLGECSAERFRVNKLRMQRVAHYSQACLREIAAAGLPISFDFHQDGTLQLFRGEADLKA FT VPNITRALDEFEVPWQFLSGAEAAAREPALAGAGAPVAGGLFLPLDGSGDCYKFVCGMG FT AWLAGQGVAFRYGCTVASLAQAGGAIAGVHTDQGLLQADAYVIALGGSTPFLLRPLGLK FT LPIYPVKGYSITAPIADEARAPRTAIMDEYNKVMISRLGPRLRAAGMAELKGYGLAIDP FT GRVAFLKRVVREWFPQGADYDAAQAWAGLRPMTPDGPAILGPTRYANLYLNCGHGSNGW FT TQACGTGRIVADIVAGRTPQIDLDGLTADRYT" FT CDS complement(214104..214883) FT /transl_table=11 FT /locus_tag="BPP3739" FT /product="putative oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3010" FT /db_xref="GOA:Q7W4C7" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W4C7" FT /protein_id="CAE39022.1" FT /translation="MDLGIAGRTALVFGGSRGMGRACARQLALEGVKVTLAARTAQTLE FT QAAAQITREAGIGVGWVAADLTRAEGREAALAACPAPDILINNADGPLPGDFRDWSRDD FT WISALDAMMLGPIDMIRRVVDGMTQRGFGRIVNIVSRSVKAPHAELGLSNGARSGLIGF FT VAGLARQTVRHNVTINNLLPGAFATDAQVRHIQGLVEQSGQPFEKLWEERGRANPAGRY FT GQPEELGALCAYICSMHTGYMTGQNILIDGGGYPGTY" FT misc_feature complement(214122..214868) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 1.2e-36" FT CDS 214998..215552 FT /transl_table=11 FT /locus_tag="BPP3740" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3011" FT /db_xref="GOA:Q7W4C6" FT /db_xref="InterPro:IPR010300" FT /db_xref="UniProtKB/TrEMBL:Q7W4C6" FT /protein_id="CAE39023.1" FT /translation="MRTPPLVSVPISPSLQNLCASVQSAQLNAAQALLRELAASVAGAN FT GALADLPPELRAGHPDHYSRHVAYADPHGSFTIAYLIWRPGQFSPVHGHKTWCTYRVLQ FT GELTESHYRWDPELGLALRTGAVARRPGDIVTATPGLAQIHRLGNAGDEVAISLHIYGV FT AQSDIATGVNHVVQEAAPRPH" FT misc_feature 214998..215084 FT /note="Signal peptide predicted for BPP3740 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.694) with cleavage site FT probability 0.360 between residues 29 and 30" FT CDS complement(215562..216545) FT /transl_table=11 FT /locus_tag="BPP3741" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3012" FT /db_xref="GOA:Q7W4C5" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W4C5" FT /protein_id="CAE39024.1" FT /translation="MKPRILKGFAASLCALALLGAACAPAHADERPLVLVVPYPPGGST FT DILARIMQPRLSKELGGRAVVVENKVGAASQIATAYVARAEPDGNTLLVSFDNHAINPA FT VKPKLPYDTFKDFVAISQTVRFPLVVGANPSVPGKTLAEFLDAARKRPANTFNYASTGV FT GSLNHLAPEELKRRAKVELLHVPYGGAGPAVQAVVGGQANMTWLSYAALRGQIQAGKIK FT PLAVAGDKRLSDLPEVPTVIESGFPGFVAYSWSGMFAPAGTPADTVRKLTAAFQTVLAD FT PEVSRKLNEAGFEIVASDGPALEQYVRSEYERWDSFIKANNISLEN" FT misc_feature complement(215577..216404) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 7.3e-85" FT misc_feature complement(216462..216545) FT /note="Signal peptide predicted for BPP3741 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 1.000 between residues 28 and 29" FT misc_feature complement(216477..216509) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(216725..217444) FT /transl_table=11 FT /locus_tag="BPP3742" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3013" FT /db_xref="UniProtKB/TrEMBL:Q7W4C4" FT /protein_id="CAE39025.1" FT /translation="MLHAVGRTEFDHAVVMVRDRLDALAPHFERQGFHLSEKAVHNLGS FT CNRLIVLEGTYVELLGWPPGAPPARKEIADSPLGLEALVFRTYDAEATYRRLLEAGFAV FT NPVQELTRAAQWQGREVQARFHTVRFAEQPIPGIRMYFCRHLTPELVWNDELLSHPNGA FT RGIVSIEADAADAQAVAQRLAAVVDVPAEAVAGGWDVPLGNLRLRVRQDPACATPRLRT FT LTLENRDGAHYTLDTGV" FT CDS complement(217461..220196) FT /transl_table=11 FT /gene="secA" FT /gene_synonym="prlD" FT /gene_synonym="azi" FT /gene_synonym="pea" FT /locus_tag="BPP3743" FT /product="preprotein translocase secA subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP3014" FT /db_xref="GOA:Q7W4C3" FT /db_xref="InterPro:IPR011116" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4C3" FT /protein_id="CAE39026.1" FT /translation="MVSLLKKLIGSRNDRLLKEYRKQVAQINSLEPKISALSDEELLAK FT TQEFRDRHQQGTSLDDLLPEAFAVVREAGKRVFGMRHFDVQMLGGIALHNGKIAEMRTG FT EGKTLMATLPVYLNAIAGKGVHVVTVNDYLARRDAEWMGRLYRFLGMSTGVVVPQQPND FT EKIAAYAADITYGTNNEFGFDYLRDNMEYRVEDRRQRRLFYAIVDEVDSILIDEARTPL FT IISGQAEDHTELYVRMNAVPPLLKRMASEPKPHEPEPEGDYWVDEKSQQVYMSEAGHES FT AEKILTRVGLLPEGESLYDPRHIALMHHMMVALRAHTLFFRDQQYVVQDDEVVIVDEFT FT GRLMVGRRWSDGLHQAVEAKEGVKIQHENQTLASITFQNYFRMYDKLSGMTGTADTEAY FT EFQEIYTLETVIIPTNKPMVRKDQNDQVFKTTQEKYQAILNDIRDCHERGQPVLVGTTS FT IENSELLAGLLRQAKLPHEVLNAKQHAREAEIVAEAGKPGHITIATNMAGRGTDIVLGG FT SVDKQVDLIHANEALSEAEKEVRIETLRAEWKPLNERVKQAGGLRIIGTERHESRRIDN FT QLRGRAGRQGDPGSSRFYLSLEDPLMRIFAGDRVRAIMERLKLPEGEPIEAGMVTRSIE FT TAQRKVEGRNFDIRKQLLEYDDVANDQRKVLYSQRNEVLEAASIGATVEGLRDAAVAEM FT FRGFIPEESVEEQWDVAGLEKALAGDWHIQLPLTDMLEQEPNLTDEELLERVVAAARQI FT YTAKVEQVGAESWAQFERSIMLQSIDTHWREHLSALDYLRQGIHLRGYAQKNPKQEYKR FT EAFELFSGMLDRIRDDVVRVLMTVRVQSAEQVEQAEADAAQRHVQNVQYHHSDYDEALA FT DDGQPQGAQPVRNVLPKVGRNEPCPCGSGKKYKHCHGQLA" FT misc_feature complement(217467..217526) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02810, SEC-C motif, score 1.4e-09" FT misc_feature complement(218652..218699) FT /note="PS01312 Protein secA signatures." FT misc_feature complement(218883..220184) FT /note="HMMPfam hit to PF01043, SecA protein, amino terminal FT region, score 1.7e-299" FT CDS complement(220376..221377) FT /transl_table=11 FT /locus_tag="BPP3744" FT /product="putative peptidase family M23/M37 protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3015" FT /db_xref="GOA:Q7W4C2" FT /db_xref="InterPro:IPR002886" FT /db_xref="UniProtKB/TrEMBL:Q7W4C2" FT /protein_id="CAE39027.1" FT /translation="MKIVIMHAQPGREGHFTLGGGRLALLVGATLLTAAIVGAAVQRYM FT SPSAPAAYAVDWPAYAQAVSPDRDTAFVRENVTMLATKVGTLQAKLASIDGLGRRVAQV FT AGVAYTDPELATQLQGMPEEATHVMDDLFTDRQPPSPATAADLAQQLDEIQVRMAQQAD FT NLRLLDAALTRRSADKALLPSAMPITEYRYLSSSYGWRRNPVTGRYAMHEGLDFSAPSG FT TPILAASGGVVLVAKYQSGYGNSVEIDHGNGLITRYAHASRLLVKPGDVVERGQEIARV FT GSSGRSTGPHLHFEVRLAGQPLDPRLFLGPQQTAPPTVAQAPATAPAASATR" FT misc_feature complement(220454..220702) FT /note="HMMPfam hit to PF01551, Peptidase family M23/M37, FT score 3.6e-36" FT misc_feature complement(221252..221317) FT /note="1 probable transmembrane helix predicted for BPP3744 FT by TMHMM2.0 at aa 20-42" FT CDS 221404..221898 FT /transl_table=11 FT /locus_tag="BPP3745" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3016" FT /db_xref="InterPro:IPR007922" FT /db_xref="UniProtKB/TrEMBL:Q7W4C1" FT /protein_id="CAE39028.1" FT /translation="MASRNTYRPPRSSTNRPGDRSALGWLGHDMRGAGVLATARKHLQI FT QHAVAAVLPPALGALCVVAKLENQHLQLAVPGPAHAAKLRQMAPRIAQTLTGQGWNVNE FT ISVRVQAGMPRPGQKAPRPPKLAQPLGSTALDAFETLHRGLRPGPLADAVARLLKHHKN FT R" FT CDS complement(222010..222933) FT /transl_table=11 FT /gene="lpxC" FT /gene_synonym="envA" FT /gene_synonym="asmB" FT /locus_tag="BPP3746" FT /product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine FT deacetylase" FT /EC_number="3.5.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3017" FT /db_xref="GOA:Q7W4C0" FT /db_xref="InterPro:IPR015870" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4C0" FT /protein_id="CAE39029.1" FT /translation="MFRQRSIQNLVRTIGVGVHSGRRVELTLRPAEANTGIVFHRVDLP FT QVVDLPASAIGVGDTRMASVLQQGNVRVSTVEHLMSALAGLGIDNLHVDLTAEEVPIMD FT GSAATFVYLLRSAGIVEQNAPKRFIRVLKPIEVREGEGRNEKWARLEPHEGFALAFSID FT FRHPAIDSTANFAEIDFATHSYVREIARARTFGFVNEVEALRSMGLARGGSLDNAIVMD FT EFRVLNSDGLRYDDEFVKHKILDAIGDLYLLGKPLVARYVAYKSGHALNNQLARALLEQ FT QDAWELVTYESQAEAPQAFRHEWKLA" FT misc_feature complement(222085..222933) FT /note="HMMPfam hit to PF03331, UDP-3-O-acyl FT N-acetylglycosamine deacetylase, score 5.4e-137" FT CDS complement(223162..224346) FT /transl_table=11 FT /gene="ftsZ" FT /gene_synonym="sfiB" FT /gene_synonym="sulB" FT /locus_tag="BPP3747" FT /product="cell division protein FtsZ" FT /note="ortholog of Bordetella pertussis (BX470248) BP3018" FT /db_xref="GOA:Q7W4B9" FT /db_xref="HSSP:1FSZ" FT /db_xref="InterPro:IPR018316" FT /db_xref="UniProtKB/TrEMBL:Q7W4B9" FT /protein_id="CAE39030.1" FT /translation="MMNFEMLENNAKGTVIKVVGVGGAGGNAVAHMIRSGVSGVDFICA FT NTDAQALAATNAPVQIRLGRTGLGAGAKPEQGRASAETAREEIRAALNGAHMVFITAGM FT GGGTGTGAGPVVAEVAKELGILTVGVVTKPFTFEGNKRLRMAEDGIGELGKHVHSLIVV FT LNENLYELMDDDATQEDCFKAADDILHNACAGIAEIINVEGNVNVDFEDVKTIMGEQGQ FT AMMGTAAASGADRARVAAEKAIACPLLEGVDLNGARGVLVNITASRTLKMRETREIMET FT IRSYASDDATVIFGTAYDEQMGEELRVTVVATGLGREAVRPQLVQHTSEALRTGTDNMP FT VGNMLAGQQGDYRGLDMPSVMRNPRSQASAQVRALESSGMDHFDIPAFLRKQAD" FT misc_feature complement(223297..224313) FT /note="HMMPfam hit to PF00091, Tubulin/FtsZ family, score FT 2.8e-09" FT CDS complement(224535..225761) FT /transl_table=11 FT /gene="ftsA" FT /gene_synonym="divA" FT /locus_tag="BPP3748" FT /product="cell division protein FtsA" FT /note="ortholog of Bordetella pertussis (BX470248) BP3019" FT /db_xref="GOA:Q7W4B8" FT /db_xref="HSSP:1E4F" FT /db_xref="InterPro:IPR003494" FT /db_xref="UniProtKB/TrEMBL:Q7W4B8" FT /protein_id="CAE39031.1" FT /translation="MTRDIKDLIVALDIGTSKVVAVVAEILPEGRFEVLGLGQHESRGM FT RKGVVVNIETTVNSIQRALEEAELMADCKIRDVYAGIAGSHIRSFNSSGMVAVKDKEVT FT ATDVARVIETAKAVNIPTDQQVLHVLTQEFIVDGQEDIREPIGMSGLRLEVRVHIVTGA FT VSAAQNIVKCVRRCGLEVQDLILQPLASSLACLTADEKELGVVLVDIGGGTTDVAIFTG FT GAIRHTAVIPIAGDQITNDIAAMLRTPTPDAEEIKLRYGVAKQVLARPDEAVEVPGLGD FT RGPRQVKRQALGAVIEPRVEELFTLIQQVVRDSGYEDLLASGVVLTGGSAQMPGMIELA FT EDVFLKPVRVAVPEYEGSLADVMRNPRFSTVMGLLQEARMQRLRGRKVAAQTGNFKTLL FT ARMKEWFMN" FT misc_feature complement(224637..225170) FT /note="HMMPfam hit to PF02491, Cell division protein FtsA, FT score 2.7e-52" FT misc_feature complement(225174..225737) FT /note="HMMPfam hit to PF02491, Cell division protein FtsA, FT score 4.1e-59" FT CDS complement(225766..226587) FT /transl_table=11 FT /gene="ftsQ" FT /locus_tag="BPP3749" FT /product="putative cell division protein FtsQ" FT /note="ortholog of Bordetella pertussis (BX470248) BP3020" FT /db_xref="GOA:Q7W4B7" FT /db_xref="InterPro:IPR005548" FT /db_xref="UniProtKB/TrEMBL:Q7W4B7" FT /protein_id="CAE39032.1" FT /translation="MWNDARTINLIANTLAVLAVAAMLLAGVAWVAQRPYFTLAAIEIE FT SMPETEMHYVSTSAVRAAIAGRFGGNFFTVDLDEAREAFESVPWVRHATVRRIWPNTLR FT VRVEEQQPLALWNENQMINTWGEAFTANTGELADDMVLPHFTGPEGTESLVVQRYAELA FT RWFAPLDMHVRELVLNPRYAWAVTLSNGMKLDLGRDPGADAPDPHGLPGALPFAARIQR FT FVQAWPVVSSRLEGRTVTQADLRYPTGFALALAPLPPEHASHSKSKPAKKR" FT misc_feature complement(226495..226560) FT /note="1 probable transmembrane helix predicted for BPP3749 FT by TMHMM2.0 at aa 9-31" FT misc_feature complement(226495..226587) FT /note="Signal peptide predicted for BPP3749 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.975 between residues 31 and 32" FT CDS complement(226600..227550) FT /transl_table=11 FT /gene="ddlB" FT /gene_synonym="ddl" FT /locus_tag="BPP3750" FT /product="D-alanine--D-alanine ligase B" FT /EC_number="6.3.2.4" FT /note="ortholog of Bordetella pertussis (BX470248) BP3021" FT /db_xref="GOA:Q7W4B6" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4B6" FT /protein_id="CAE39033.1" FT /translation="MSKQFGKVGVLYGGRSAEREVSLMSGKGVHEALLSAGVDAHLFDT FT GERSLADLAAAGFERVFIALHGRYGEDGTLQGALELLGIPYTGSGPLASSLSMDKIMTK FT RVWLQHGLPTPAFEVLGGSTELRLVPDRLGLPLILKPPHEGSTVGITKVAGYSDMKAAY FT ELAARFDAEVLAEQFITGRELTVAVLGSGAAARALPVIEIVAPGGNYDYEHKYFSDDTQ FT YFCPADLPADVAADVAAVAERAYAALGCEGWGRVDFILDRENRPWLLEMNTSPGMTGHS FT LVPMAARAVGMSYADLCVAILAKAACKVRSPARQD" FT misc_feature complement(226642..227535) FT /note="HMMPfam hit to PF01820, D-ala D-ala ligase, score FT 2.9e-113" FT misc_feature complement(227320..227355) FT /note="PS00843 D-alanine--D-alanine ligase signature 1." FT CDS complement(227547..228953) FT /transl_table=11 FT /gene="murC" FT /locus_tag="BPP3751" FT /product="UDP-N-acetylmuramate--alanine ligase" FT /EC_number="6.3.2.8" FT /note="ortholog of Bordetella pertussis (BX470248) BP3022" FT /db_xref="GOA:Q7W4B5" FT /db_xref="InterPro:IPR005758" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4B5" FT /protein_id="CAE39034.1" FT /translation="MKHRIQHIHFVGVGGSGMSGIAEVLLNLGYTISGSDLNESAVTRR FT LAELGMRIAIGHDRANVAGAGAIVTSTAVAGDNPEVLAARAARIPVVPRAVMLAELMRL FT KRGIAVAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLTSAGANARLGQGEYIVVEADE FT SDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAILCADDANV FT REIMPFVSRPITTYGLSPDAQVCAQDVQADGTRMRFTVQRRDRDVVLPALQVELNLPGL FT HNVRNALAAIAVATELGVDDAAIREALAAFKGVGRRFTQWGDLPVPAAHGGGTFTLVDD FT YGHHPVEMAATLAAARGAWPQRRIVLAFQPHRYTRTRDCFEDFVRVLGSADGVLLTEVY FT AAGEAPLVAADGRALSRALRVAGKVEPVFVEDVGELPQAILDFVRDGDVVVVMGAGSIS FT KTPALVGELA" FT misc_feature complement(227721..228014) FT /note="HMMPfam hit to PF02875, Mur ligase family, glutamate FT ligase domain, score 3e-20" FT misc_feature complement(228036..228830) FT /note="HMMPfam hit to PF01225, Mur ligase family, catalytic FT domain, score 1.6e-63" FT CDS complement(228950..230023) FT /transl_table=11 FT /gene="murG" FT /locus_tag="BPP3752" FT /product="UDP-N-acetylglucosamine--N-acetylmuramyl-" FT /EC_number="2.4.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3023" FT /db_xref="GOA:Q7W4B4" FT /db_xref="InterPro:IPR007235" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4B4" FT /protein_id="CAE39035.1" FT /translation="MSAPTILIMAGGTGGHIMPGLAVAEVLRERGWRVLWLGNPDKMEG FT RLVPPRGIELVPLRFQGVRGRGAAALLKLPFLLARACAQAWRRLADIRPDVVLGMGGYV FT AFPGGVMAALRRMPLVVHEQNAVAGTANRWLARLARRVLSGFPGVLPRGEALGNPVRAD FT LCALPEPAERYAGRSGALRVLVVGGSLGAHALNTTVPQALALLPEQARPQVVHQAGEQH FT LPALQQAYAQAGVQADCRAFIDDMAGAMAQADLLICRAGAMTVSEVAAAGVAALFVPFP FT HAIDDHQTANARFLSDAQAAWLQPQATLTPQWLAQWLGQRTRQELQAVAGRARTHALPR FT AAAHIADVCEQAARRAS" FT misc_feature complement(229199..230008) FT /note="HMMPfam hit to PF03033, Glycosyltransferase family FT 28, score 9.6e-93" FT misc_feature complement(229952..230023) FT /note="Signal peptide predicted for BPP3752 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.819) with cleavage site FT probability 0.760 between residues 24 and 25" FT CDS complement(230020..231213) FT /transl_table=11 FT /gene="ftsW" FT /locus_tag="BPP3753" FT /product="cell division protein FtsW" FT /note="ortholog of Bordetella pertussis (BX470248) BP3024" FT /db_xref="GOA:Q7W4B3" FT /db_xref="InterPro:IPR013437" FT /db_xref="UniProtKB/TrEMBL:Q7W4B3" FT /protein_id="CAE39036.1" FT /translation="MSLFAELTASVNAVRPGRTRMRNYDMPLIVAASTLLLLGLLMVYS FT ASIALADGPRYASYGRYYFVIRHGLFLTAGLLAAAVVLSVPIRVWQRLAVPLFMFALIL FT LVAVLIPGIGREVNGAHRWIPLGPLNFQPSELMKLAALLYAADYTVRKQEHMQAFSRGF FT LPMACALGGVGMLLLLEPDLGAFMVIVAIAIGILFLGGINGKYFSNLLAVLVGTFLMLI FT WVSPWRRARLFAYLDPWNEANAYGSAYQLSHSLIALGRGEWFGVGLGASVEKLHYLPEA FT HTDFLMAVVGEELGFAGVMLVITLFAIIVYRGFDIGRQAIAMERTFAGLVAHGVAMWVG FT VQAFINMGVCLGLLPTKGLTLPLMSYGGSGIVMNLCALAMLIRVDVENRVMMRGGRV" FT misc_feature complement(230044..231138) FT /note="HMMPfam hit to PF01098, Cell cycle protein, score FT 2.3e-111" FT misc_feature complement(join(230068..230133,230179..230232, FT 230272..230328,230533..230586,230608..230664, FT 230677..230742,230779..230844,230875..230931, FT 230953..231018,231064..231129)) FT /note="10 probable transmembrane helices predicted for FT BPP3753 by TMHMM2.0 at aa 28-50, 65-87, 94-113, 123-145, FT 157-179, 183-202, 209-227, 295-314, 327-345 and 360-382" FT misc_feature complement(231061..231213) FT /note="Signal peptide predicted for BPP3753 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.963) with cleavage site FT probability 0.945 between residues 51 and 52" FT CDS complement(231210..232736) FT /transl_table=11 FT /gene="murD" FT /locus_tag="BPP3754" FT /product="putative peptidoglycan synthesis protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3025" FT /db_xref="GOA:Q7W4B2" FT /db_xref="HSSP:1E0D" FT /db_xref="InterPro:IPR005762" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4B2" FT /protein_id="CAE39037.1" FT /translation="MNTTETSRAAAPLVLILGLGETGVAAARWCARQGSPLRVADTRAQ FT PGGLAALQAALADATVEYRLGCGEQFPPDLLDGVAQIVLSPGLVPHESPTRELLEQARE FT RNVEVVGEIELFARALAGLAESREYRPRVLAITGTNGKTTVTALTRQLIEAGGMSARAA FT GNISPAALAALIDALDQDDLPQVWVLELSSFQLETTRTLAPDAAVVLNVTQDHLDWHGD FT MQAYAQAKARILKPARLAIVNRDDPLTVAMVESLQALNVRSFGRDVPALVGDMGLELGQ FT GVAWLTACESNDFDEPAPRRKKDAPPPTRAGGRMSRLMPVDALRIRGVHNALNALAAMQ FT LARSLDLGWGPMLRTLRDYAGEPHRAELVRSIGDVDYINDSKGTNVGATVAALEGLGQQ FT VVLIAGGQGKGQDFSPLVPVVRRHARAVVLIGVDGAAIGKVLEPTGVPCVAAADMREAV FT RRAAELAQPGDAVLLSPACASFDMFRNYPHRGEVFAAEVQELALDRGEVA" FT misc_feature complement(231411..231653) FT /note="HMMPfam hit to PF02875, Mur ligase family, glutamate FT ligase domain, score 1.4e-10" FT misc_feature complement(231675..232577) FT /note="HMMPfam hit to PF01225, Mur ligase family, catalytic FT domain, score 4.4e-33" FT misc_feature complement(232257..232280) FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT misc_feature complement(232266..232337) FT /note="PS01011 Folylpolyglutamate synthase signature 1." FT misc_feature complement(232656..232736) FT /note="Signal peptide predicted for BPP3754 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.785) with cleavage site FT probability 0.590 between residues 27 and 28" FT CDS complement(232733..233866) FT /transl_table=11 FT /gene="murX" FT /gene_synonym="mraY" FT /locus_tag="BPP3755" FT /product="phospho-N-acetylmuramoyl-pentapeptide-transfera FT se" FT /EC_number="2.7.8.13" FT /note="ortholog of Bordetella pertussis (BX470248) BP3026" FT /db_xref="GOA:Q7W4B1" FT /db_xref="InterPro:IPR018480" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4B1" FT /protein_id="CAE39038.1" FT /translation="MRAIGVFEYITLRAVLACATALLIGLVAGPRVIRRLTEMKIGQAV FT RAYGPESHLVKTGTPTMGGALILIAIAISTLLWADWINRFVWVVLLVTFGFGWIGWMDD FT YRKVVYRDPEGMPARQKFFWQATIGLVAAVYLAFAVSAPANTELWPLFKAWVGSGFTMP FT LPTRADLIVPFFKSVSYPLGVLGFVALTWAVIVGTSNAVNLTDGLDGLAIMPTVMVGSA FT LGIFAYVVGRVDYSKYLLFPYIPGAAELMVLCAAIGGAGLAFLWFNAYPAQVFMGDVGA FT LALGGALGTIAVIVRQEIVLFIMGGVFVVETLSVMVQVTWFKYTKRKYGQGRRIFRMAP FT LHHHFEVGGWKETQVVVRFWIITMMLVLVGLSTLKLR" FT misc_feature complement(join(232745..232801,232904..232969, FT 232985..233050,233081..233146,233168..233233, FT 233279..233344,233435..233500,233561..233611, FT 233633..233689,233765..233830)) FT /note="10 probable transmembrane helices predicted for FT BPP3755 by TMHMM2.0 at aa 12-34, 59-78, 85-102, 122-144, FT 174-196, 211-233, 240-262, 272-294, 299-321 and 355-374" FT misc_feature complement(232964..233611) FT /note="HMMPfam hit to PF00953, Glycosyl transferase, score FT 4.1e-51" FT CDS complement(233892..236729) FT /transl_table=11 FT /gene="murE" FT /locus_tag="BPP3756" FT /product="Possible murein precusor biosynthesis FT bifunctional protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3027" FT /db_xref="GOA:Q7W4B0" FT /db_xref="HSSP:1GG4" FT /db_xref="InterPro:IPR018109" FT /db_xref="UniProtKB/TrEMBL:Q7W4B0" FT /protein_id="CAE39039.1" FT /translation="MSPTNRLNAVQRQHLDQALAWLRGCVAPTADLRLDSREIEPGDVF FT VACPGLASDGRQFMDQALARGASAILYETEGAPVAPAGAQALPVAQLRTLLGALADEWY FT GRPSQDLSVVAITGTNGKTSCTQWLAQVLTRMGKPCGSIGTLGALLPDGQSLGGSLTTP FT DVLTMHRTLARMRAAGARAVALEASSIGIEQGRLDHIRIAVAGFTNLTRDHLDYHGTMQ FT RYEQAKAALFQWPDLQAAVVNADDPAGERLLASLPAALKTGYSLQGAPADVHARDLQAT FT AHGQVFTLALPDGEAQIVTRLLGQHNISNLLLVAGALSKLGWPLPQIARELAAISPVDG FT RLQAVTPVPLQHLTAGAQGALVVVDYAHTPDALARALTALRPVAQARGGRLVCVFGCGG FT ERDPGKRPEMGRIAVERADRVVVTSDNPRSESPQDIIDQILAGIPAGMRAAVQPDRALA FT IMQTLWSAAPDDVILLAGKGHETYQDIGGRKLPFDDRQWARLALLLPHAGAVSTDTRRI FT GRGELFVALSGENFDGHDYLPQAQSAGACAAVVAHPVADVALPQLVLGDTLAALGRMGT FT AWRSSFTLPVVAVTGSNGKTTTKEMISAILAQWQGDDGRLATAGNFNNEIGVPLTLLRL FT RARHRAAVFELGMNHPGEIERLAAMAAPTVALVTNAQREHQEFMHTVEAVAHENGAVIG FT ALPEDGVAVYPGDEPYAAIWDKLAGARRVLRFGLQPGLDVYAERVVTQAHGTQCGLVTP FT AGSAELDLPVPGLHNLRNALAAIACGLAAGAPLHTCIAALAGFQAVAGRMQHRQMSDGT FT VLIDDTYNANPDSARAAIDVLARLPAPRALVLGDMGEVGDNGPAMHREVGDYAREHGID FT ALITLGEASRDAAHAFGPAARACASVDEVVAALRGLRPSSILIKGSRFMRMERVVTAFS FT GNNQAPSGQGDKHAA" FT misc_feature complement(234072..234335) FT /note="HMMPfam hit to PF02875, Mur ligase family, glutamate FT ligase domain, score 1.6e-13" FT misc_feature complement(234357..235175) FT /note="HMMPfam hit to PF01225, Mur ligase family, catalytic FT domain, score 6.5e-45" FT misc_feature complement(235416..235718) FT /note="HMMPfam hit to PF02875, Mur ligase family, glutamate FT ligase domain, score 1.3e-27" FT misc_feature complement(235740..236585) FT /note="HMMPfam hit to PF01225, Mur ligase family, catalytic FT domain, score 4.2e-52" FT misc_feature complement(236319..236390) FT /note="PS01011 Folylpolyglutamate synthase signature 1." FT CDS complement(236726..238456) FT /transl_table=11 FT /gene="ftsI" FT /gene_synonym="pbpB" FT /locus_tag="BPP3757" FT /product="peptidoglycan synthetase precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3028" FT /db_xref="GOA:Q7W4A9" FT /db_xref="InterPro:IPR001460" FT /db_xref="UniProtKB/TrEMBL:Q7W4A9" FT /protein_id="CAE39040.1" FT /translation="MRRVPFFDNPVLRGQLPMWRARLVLILLFGGFVVLAGRALFLQGL FT STEFLQQQGERRYERTLTLAATRGKILDRNGVVLASSVPARAIWAIPEDAKPIPPEQVA FT ALAQLLQTPVAELRRRLADEDRNFVYLKRQVPMDVADKIKQMALPGIHQQPESRRYYPE FT GEVTAHIVGFNNVEDQGQEGVELTFNQQLSGQPGSRRVIKDRLGRVIEDVQAVTLPVDG FT RDLRLSIDTRLQYLVYKELQDARVAHQAKSATAVVIDVHTGEVLALVNLPSFDPNHRET FT FQVSTLRNQAITDTFEPGSIMKPFTAALALDLGRISTATMFETGNGRFQYQGSTISDVS FT RNGTLDLAGVLLKSSNIGMTMISEKLQSREMWDLFTGLGLGQAPQLGFPGAAPGRLRPW FT NRWRLIEKATMAYGYGLSVSLLQVARAYTVFARDGDMVSLTLVKRESAPTSVRVYNPKT FT AATVRAMLEAAAGPDGAKRAQVQGYRVAGKSGTARKIVDGKYSAQRHRSSFVGFAPVSN FT PKIVVAVSIDEPQVGGYYGGAIAAPVFSRIVGGSLRLMGVQPDAPFESTIVAGNPEGAR FT " FT misc_feature complement(236819..237766) FT /note="HMMPfam hit to PF00905, Penicillin binding protein FT transpeptidase domain, score 1.4e-100" FT misc_feature complement(236990..237013) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(237815..238270) FT /note="HMMPfam hit to PF03717, Penicillin-binding Protein FT dimerisation domain, score 7.2e-48" FT misc_feature complement(238331..238387) FT /note="1 probable transmembrane helix predicted for BPP3757 FT by TMHMM2.0 at aa 23-42" FT CDS complement(238453..238731) FT /transl_table=11 FT /gene="ftsL" FT /locus_tag="BPP3758" FT /product="putative cell division protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3029" FT /db_xref="GOA:Q7W4A8" FT /db_xref="InterPro:IPR011922" FT /db_xref="UniProtKB/TrEMBL:Q7W4A8" FT /protein_id="CAE39041.1" FT /translation="MGRTSLIVAALLMLSAIFLVTSRYQSRQLFIELGRSQAEARDLDT FT NWRRLQLERAELARNARIDRAARDDLKMIPIVPDRTLYMNQPAGGAQ" FT misc_feature complement(238657..238731) FT /note="Signal peptide predicted for BPP3758 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.981) with cleavage site FT probability 0.238 between residues 25 and 26" FT CDS complement(238731..239825) FT /transl_table=11 FT /gene="mraW" FT /locus_tag="BPP3759" FT /product="S-adenosyl-methyltransferase" FT /EC_number="2.1.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3030" FT /db_xref="GOA:Q7W4A7" FT /db_xref="InterPro:IPR002903" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4A7" FT /protein_id="CAE39042.1" FT /translation="MEFEHRPVLLEPTVDALVLPDFGGKGAHRQAGEPGPDAATRLQHG FT VFVDGTFGRGGHSRALLARLGAQARLVVFDKDPQAIAVARELAAGDGRVEVVHGGFATM FT AEELTARGIEQVDGVMLDLGVSSPQIDDAERGFSFMRDGPLDMRMDTTRGPTVADWLAQ FT ASVDEMREVIADYGEERFAFQVAKAIAACRATRPLHTTLQLAECVAGAVRTREKGQHPA FT TRTFQALRIYINRELEELARALASALDLLGPGGRLAVISFHSLEDRMVKQCIAAAARPA FT AAHARLPLRESELPQPLVRSLGKVVADDVEVAGNARARSAILRVAERTGEPLPPGGGAG FT FVKAGRVPGEPVRGTRAGSKGRRR" FT misc_feature complement(238839..239819) FT /note="HMMPfam hit to PF01795, MraW methylase family, score FT 1.3e-123" FT CDS complement(239834..240325) FT /transl_table=11 FT /gene="mraZ" FT /locus_tag="BPP3760" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3031" FT /db_xref="InterPro:IPR003444" FT /db_xref="UniProtKB/Swiss-Prot:Q7W4A6" FT /protein_id="CAE39043.1" FT /translation="MKLLPVEWEKVGICATKWGKRVFQGSSALTLDAKGRISIPTRHRD FT ALMDRAEGRLTLTRHPDGCLLVYPRPEWEEKRAQIAAFPMSARALQRLLLGNAQDVDID FT GSGRVLIAPELRNASGMTRDVMLLGMGAHFELWDAASLARREAEDLAQGMPDVLNQFSF FT " FT misc_feature complement(239852..240046) FT /note="HMMPfam hit to PF02381, Domain of unknown function FT UPF0040 family, score 2.6e-05" FT misc_feature complement(240047..240262) FT /note="HMMPfam hit to PF02381, Domain of unknown function FT UPF0040 family, score 4.7e-10" FT misc_RNA complement(240545..240958) FT /note="RNAseP" FT CDS 241065..242873 FT /transl_table=11 FT /locus_tag="BPP3761" FT /product="putative ABC transporter ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3034" FT /db_xref="GOA:Q7W4A5" FT /db_xref="HSSP:1US8" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W4A5" FT /protein_id="CAE39044.1" FT /translation="MALASLITLTDVQLAYGHHPLLDHADFAIQEGERIGLIGRNGAGK FT SSLLRLLDGRTQPDDGDIARSSGLRVATVEQEPALDETGTVFDVVCDAHAHPEDWQRPA FT RVRAALERLGLPAEAAIASLSGGMRKRVALARALVDEPDLLLLDEPTNHLDFDGIAWLE FT AMLRNWKGAAVIITHDRRFLDAVATRIVELDRGRLLSFPGNFSQWQERKAQWLEAERLE FT QARFDKLLAQEEVWIRKGIEARRTRNEGRVRRLEQLRVERAERRERVGNVSLALAQGQR FT SGKLVAELQDVGKAFGDKVVVRDYSTTILRGDRIGIVGPNGAGKTTLLKLLLGELPPDS FT GTVRQGSNVSVAYFDQMRAQLDENATLVDIISPGSEWVEIGGARKHVMSYLGDFLFSPA FT RAGSPVSSLSGGERARLLLARLFARPANVLVLDEPTNDLDIETLELLEELLQEYAGTVL FT LVSHDRAFLNNVVTQTIAAEGDGRWRDYVGGYDEWQAQRPAQAAAPKAEKPAETAKPAA FT ARPKPVRAARLSAWDLRELEALPDAIAAIEARQAELSGKLADGSLYRDAPDEVERINAE FT LATLESELEEKFARWELLEARRGDSA" FT misc_feature 241158..241652 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 6.8e-52" FT misc_feature 241179..241202 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 241434..241478 FT /note="PS00211 ABC transporters family signature." FT misc_feature 241998..242507 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.6e-39" FT misc_feature 242019..242042 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 242286..242330 FT /note="PS00211 ABC transporters family signature." FT CDS complement(242913..243992) FT /transl_table=11 FT /gene="pyrC" FT /locus_tag="BPP3762" FT /product="dihydroorotase" FT /EC_number="3.5.2.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP3035" FT /db_xref="GOA:Q7W4A4" FT /db_xref="HSSP:1J79" FT /db_xref="InterPro:IPR004721" FT /db_xref="UniProtKB/TrEMBL:Q7W4A4" FT /protein_id="CAE39045.1" FT /translation="MRPASMSNQHATELTITRPDDWHLHLRDGSALEAVVLDTARQFAR FT AIVMPNLRPPVTTTEQALAYRARIEAALRKAGGDTAAFTPLMTLYLTDNTPAEEIVRAH FT ESGQVAAVKLYPAGATTNSDAGVTDLLGKCGAALAALERCGMPLLVHGEVTDPAIDVFD FT REAVFIERVMQPLRRAYPGLKVVFEHITTREGAHYVRDAEGPTAATITPQHMLYNRNAI FT FTGGVRPHWYCLPILKREVHRQALVEAATSGSPRFFLGTDSAPHARGLKEHACGCAGCY FT TALHAMELYATAFDAVGRLDRLEGFASFHGPDFYGLPRNTGTLTLRREAYEIPAEVAFG FT DTTLVPLAGGESLGWRALA" FT misc_feature complement(243180..243215) FT /note="PS00483 Dihydroorotase signature 2." FT misc_feature complement(243906..243932) FT /note="PS00482 Dihydroorotase signature 1." FT CDS complement(243989..245182) FT /transl_table=11 FT /locus_tag="BPP3763" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3036" FT /db_xref="GOA:Q7W4A3" FT /db_xref="InterPro:IPR010168" FT /db_xref="UniProtKB/TrEMBL:Q7W4A3" FT /protein_id="CAE39046.1" FT /translation="MYARSPLESIRLFHDELTALRRDLHAHPELGFEEVRTSGIVAGAL FT EALGIEVHRGIGKTGVVGIIRGRTCDSGRMIGLRADMDALPMTEDNDFGHKSTKPGLMH FT GCGHDGHTAVLIGAAKYLAQTRNFDGTAVLIFQPAEEGRGGAKAMIDDGFFDTFPCDAI FT YALHNWPGLKPGTVGINPGPMMAAADRFEITINGRGGHGAHPYQTIDPVTVAGHLITAL FT QTIVSRNVNPLDSAVLSIGSVQAGHPGAMSVIPREARMVGTVRTFRRSVQEMVESRMRE FT LASAIASAFGATAEVLYERIYPATLNTPQHANLVADIATEMIGRENVVRDLVPSMGSED FT FSFMLQMRPGAYFRLGQGGAESGCVLHNSHFDFNDAVIPLGSAMFSALAERGMPLAD" FT misc_feature complement(244169..245143) FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40, score 2.9e-34" FT CDS 245332..245610 FT /transl_table=11 FT /locus_tag="BPP3764" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3037" FT /db_xref="InterPro:IPR019835" FT /db_xref="UniProtKB/TrEMBL:Q7W4A2" FT /protein_id="CAE39047.1" FT /translation="MATPSKTATARKPNAAFMKPLTPSAELAAVIGSEAVPRTEVTKKI FT WDYIKKHNLQDASNKRNINADAKLRPIFGKDQVMMFELTKLVNAHLK" FT misc_feature 245380..245604 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02201, BAF60b domain of the SWIB FT complex, score 1.3e-36" FT CDS complement(246007..246399) FT /transl_table=11 FT /locus_tag="BPP3765" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3038" FT /db_xref="UniProtKB/TrEMBL:Q7W4A1" FT /protein_id="CAE39048.1" FT /translation="MNLFDGAVIVSDPQTLQPGGAPDLRTLTHVAYGLYALGFLTGGFL FT GIATLAAVVLMYVKRGDTAGTMYASHFDWLLRTFWWALLWLAISAIATLIFIGWIGVVA FT TVVWVLYRLIKGWLALLEGNAPSSYT" FT misc_feature complement(join(246067..246162,246226..246291)) FT /note="2 probable transmembrane helices predicted for FT BPP3765 by TMHMM2.0 at aa 36-58 and 79-111" FT rRNA complement(246992..247106) FT /note="5S rRNA" FT rRNA complement(247281..250162) FT /note="23S rRNA" FT tRNA complement(250485..250560) FT /note="tRNA Ala anticodon TGC, Cove score 88.49" FT tRNA complement(250581..250657) FT /note="tRNA Ile anticodon GAT, Cove score 93.29" FT rRNA complement(250755..252286) FT /note="16S rRNA" FT CDS complement(253158..253634) FT /transl_table=11 FT /gene="lrp" FT /gene_synonym="alsB" FT /gene_synonym="livR" FT /gene_synonym="ihb" FT /gene_synonym="oppI" FT /locus_tag="BPP3766" FT /product="leucine-responsive regulatory protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3039" FT /db_xref="GOA:Q7W0T3" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q7W0T3" FT /protein_id="CAE39049.1" FT /translation="MLGVELDRTDRRILAELQRDGRLSNQELAERVSLSPSPCLRRVRR FT LEEQGYIKRYVALVDAEKVGLGLLAYVTIKLNKHSGGSHAPMGNFARDVQLWPEVVECY FT AMSGDMDYLLRIQVADLAHFSRFAMDTLMQHPAVVDMKSYFALQQIKETTELRV" FT misc_feature complement(253227..253547) FT /note="HMMPfam hit to PF01037, AsnC family, score 2.9e-37" FT CDS 253787..254899 FT /transl_table=11 FT /gene="bllY" FT /locus_tag="BPP3767" FT /product="putative hemolysin" FT /note="ortholog of Bordetella pertussis (BX470248) BP3040" FT /db_xref="GOA:Q7W4A0" FT /db_xref="HSSP:1CJX" FT /db_xref="InterPro:IPR005956" FT /db_xref="UniProtKB/TrEMBL:Q7W4A0" FT /protein_id="CAE39050.1" FT /translation="MAENFQPWENPMGTAGFEFIEYTAPDPVALRKVFELLGFKAIAKH FT RHKDVTLYRQGGVNFLINAEPDSFAQRFARLHGPSICAIGFRVQDANKAYKRALELGAW FT GFDSHSGPMELNIPAIKGIGDSLIYLVDRWRGKQGHGGIGDISIYDVDFEPIDRDTAQT FT DVNHAGAGLTLVDHLTHNVHKGRMAEWSEFYERLFNFREVRYFDIEGKVTGVKSKAMTS FT PCGNIRIPINEEGTEEKGQIQEYLDLYRGEGIQHIAMATDDIYQTVEALRRNGVVFLDT FT PDTYYELLDRRLPDHGEDVTRLRKNRILLDGAPGGGLLLQIFTENQIGPIFFEIIQRKG FT NDGFGEGNFKALFESIELDQMRRGVVKQVD" FT misc_feature 254345..254722 FT /note="HMMPfam hit to PF00903, Glyoxalase/Bleomycin FT resistance protein/Dioxygenase superfamily, score 4.7e-06" FT CDS complement(254967..255527) FT /transl_table=11 FT /locus_tag="BPP3768" FT /product="putative methionine sulfoxide reductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3041" FT /db_xref="GOA:Q7W499" FT /db_xref="HSSP:1FF3" FT /db_xref="InterPro:IPR002569" FT /db_xref="UniProtKB/TrEMBL:Q7W499" FT /protein_id="CAE39051.1" FT /translation="MSSSQPAGPATEAAVLGGGCFWCVEAVFKDLRGVTGIEPGYAGGH FT VEHPTYEQVCGKDTGHIEVARVEFDPAVLSYGDLLRVFFATHDPTTPGRQGNDVGPQYE FT SAIFWQDERQREQAQAVMDELRAQQVFDAPIVTRLLAPAKFWPAEDYHRDYYALHPEQG FT YCQFVIAPKVAKFRKQFQDRLAR" FT misc_feature complement(255018..255494) FT /note="HMMPfam hit to PF01625, Peptide methionine sulfoxide FT reductase, score 1.7e-65" FT CDS complement(255551..255883) FT /transl_table=11 FT /gene="cyt" FT /locus_tag="BPP3769" FT /product="cytochrome C552 precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP3042" FT /db_xref="GOA:Q7W498" FT /db_xref="HSSP:1A56" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:Q7W498" FT /protein_id="CAE39052.1" FT /translation="MHLKSSLAAWAVLACLAGGSAGAQPAGEALARNKNCMACHQVDSK FT RVGPPLRSISERYAGQSEAAAYLAGKIRGGGRGAWGAVPMPAQPQVSDADAHALAEWIL FT SLPAKP" FT misc_feature complement(255563..255820) FT /note="HMMPfam hit to PF00034, Cytochrome c, score 4.9e-14" FT misc_feature complement(255761..255778) FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature complement(255815..255883) FT /note="Signal peptide predicted for BPP3769 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.968 between residues 23 and 24" FT misc_feature complement(255839..255871) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(255867..257651) FT /transl_table=11 FT /gene="ilvD" FT /locus_tag="BPP3770" FT /product="dihydroxy-acid dehydratase" FT /EC_number="4.2.1.9" FT /note="ortholog of Bordetella pertussis (BX470248) BP3043" FT /db_xref="GOA:Q7W497" FT /db_xref="InterPro:IPR000581" FT /db_xref="UniProtKB/Swiss-Prot:Q7W497" FT /protein_id="CAE39053.1" FT /translation="MSDNNRRACCSVALPSDSDLAGPAWAYAPGDKTMSDNNRSRHITE FT GVARAPNRAMYYALGYTEADFQNPMIGVANGHSTITPCNSGLQRLADAAIEAIRVSRAN FT PQVFGTPTISDGMSMGTEGMKYSLVLREVIADCIETAAQGQWMDGVVVIGGCDKNMPGG FT MMALARMNVPGIYVYGGTIKPGHYKGKDLTIVSVFEAVGEYTMGRMDETDFKAIEQCAI FT PGSGSCGGMYTANTMSSAFEAMGMSLPHSSTMANEDQEKVASAAESARVLVEAVRRQLR FT PRDIITRASIENAVAVIMATGGSTNAVLHFLAIAHAAEVPWNIDDFERIRKRVPVICDL FT KPSGKYVATDLHRAGGIPQVMKILLNAGLLHGDCITITGKTVAETLANVPDAPPPGQDV FT IMPIERAFYPQGHLAILKGNLSPEGCVAKITGLKNPVITGPARVFDSEDDAMSAIMDRR FT IRDGDVVVIRYEGPKGGPGMREMLAPTSALVGQGLGETVGLITDGRFSGGTWGMVVGHV FT APEAFVGGPIALIREGDSVTIDAHQLLLQLNISDEEMAARRKAWAQPKPRYVRGVLAKF FT GKLACTASRGAVTDAFEE" FT misc_feature complement(255882..257450) FT /note="HMMPfam hit to PF00920, Dehydratase family, score FT 3.8e-284" FT misc_feature complement(257154..257186) FT /note="PS00886 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 1." FT misc_feature complement(257574..257651) FT /note="Signal peptide predicted for BPP3770 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.983) with cleavage site FT probability 0.981 between residues 26 and 27" FT CDS 257672..258460 FT /transl_table=11 FT /gene="lgt" FT /gene_synonym="umpA" FT /locus_tag="BPP3771" FT /product="prolipoprotein diacylglyceryl transferase" FT /EC_number="2.4.99.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3044" FT /db_xref="GOA:Q7W496" FT /db_xref="InterPro:IPR001640" FT /db_xref="UniProtKB/Swiss-Prot:Q7W496" FT /protein_id="CAE39054.1" FT /translation="MLQYPQIDPVALRIGPLAIHWYGLMYLIGFALVYALGRRRITSGH FT TTSMTVRDLEDLIFYSVLGVVLGGRLGYVLFYKPAYYLANPLEIFYLWEGGMSFHGGLI FT GVIVVMLLFAHKKRLGFFTVSDFIAPLIPLGLAAGRLGNFINGELWGRPTDVPWAMVFP FT QSGDGLPRHPSQLYELGLEGIVLFALLWWYSSKPRAAGQVSAMFLMGYGAFRFLVEFTR FT EPDNFLGLLAAGLSMGQWLSIPMVLAGAGLYLFTARPPSR" FT misc_feature 257687..258448 FT /note="HMMPfam hit to PF01790, Prolipoprotein FT diacylglyceryl transferase, score 2.5e-100" FT misc_feature join(257714..257782,257840..257899,257942..258010, FT 258029..258097,258197..258250,258269..258325, FT 258368..258436) FT /note="7 probable transmembrane helices predicted for FT BPP3771 by TMHMM2.0 at aa 15-37, 57-76, 91-113, 120-142, FT 176-193, 200-218 and 233-255" FT misc_feature 258086..258124 FT /note="PS01311 Prolipoprotein diacylglyceryl transferase FT signature." FT CDS complement(258435..259205) FT /transl_table=11 FT /locus_tag="BPP3772" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3045" FT /db_xref="InterPro:IPR007497" FT /db_xref="UniProtKB/TrEMBL:Q7W495" FT /protein_id="CAE39055.1" FT /translation="MLRHSAFSLTRLGAACAAALALAAAQPVLAQSQPPAAAPQAQADS FT ASRAPELTLQASASSEVKQDTVRITLSAEVEANDQPGAGKKLSAALEDVVKRARGAKNI FT DVRTGGYNVWPNTNSKGKVINWRGQGEVVLESKDFQAASALAAKLGDKTAITNISFQLS FT RAGREAEERKLLSQAATAFRERALAAANAFGFSGYRLIKLDLGGSGGAPVPRAVGAQMM FT MAKDAGGGAPNPEAPLEAGEVTVSIAVNGTVALQ" FT CDS complement(259519..259830) FT /transl_table=11 FT /locus_tag="BPP3773" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3047" FT /db_xref="GOA:Q7W494" FT /db_xref="InterPro:IPR007838" FT /db_xref="UniProtKB/TrEMBL:Q7W494" FT /protein_id="CAE39056.1" FT /translation="MERVDVTILGRDYSLACSAEEKPVLMAAVRHVDQLMLRIQGSGKV FT SSNERIAVMAALQVAGELLAMKAPDGPLGGLAVGDFKRRIEEMNLMLDDALSGQEKLL" FT CDS complement(259830..260360) FT /transl_table=11 FT /locus_tag="BPP3774" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3048" FT /db_xref="HSSP:1JNM" FT /db_xref="UniProtKB/TrEMBL:Q7W493" FT /protein_id="CAE39057.1" FT /translation="MQVLPNIAVFLSLREEARSVPGWFTIAPMLQDLDQLAARIGQLVQ FT RTRHLHAERDALRVRLNDSESEQRKLKQRCADFETELQALQARLREHDGATATQLAEAQ FT QTEVALREQLAREAAERQALESRVSAREAELQGNLRARDTDLQRLRVAASTARERIDAV FT LARLPGAPAGEQS" FT CDS 260713..261177 FT /transl_table=11 FT /locus_tag="BPP3775" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3050" FT /db_xref="InterPro:IPR009936" FT /db_xref="UniProtKB/TrEMBL:Q7W492" FT /protein_id="CAE39058.1" FT /translation="MQLRNRQDFWSGVMFIVLGLGFSWQASSYQMGTAARMGPGYFPFW FT LGLVLALLGAIVLISALSKKATETAVEGFDWRIVFLVVGSVVLYALILKPLGVYLSVFI FT LVVVSSLASHEFSWKVAVANGIFLVVFSYLAFIKGLGLIFPLWPSFLGMN" FT misc_feature 260713..260796 FT /note="Signal peptide predicted for BPP3775 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.814) with cleavage site FT probability 0.534 between residues 28 and 29" FT misc_feature join(260737..260790,260833..260901,260938..260991, FT 261001..261066,261085..261153) FT /note="5 probable transmembrane helices predicted for FT BPP3775 by TMHMM2.0 at aa 9-26, 41-63, 76-93, 97-118 and FT 125-147" FT CDS 261192..262697 FT /transl_table=11 FT /locus_tag="BPP3776" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3051" FT /db_xref="InterPro:IPR002823" FT /db_xref="UniProtKB/TrEMBL:Q7W491" FT /protein_id="CAE39059.1" FT /translation="MELFDNLMLGFSVAFTPENLAYALLGCILGTLIGVLPGIGPVPTI FT AMLLPITYVLPPVAGLIMLAGIYYGAQYGGSTTAILVALPGETSAVVTVLDGHQMARNG FT RAGAALAIAALGSFFAGCVATLLLAAFAPPLAEVAFKFGPAEYFSLMVLGLVGAVVLAS FT GSLPKAIAMIILGLLLGMVGTDVNSDVARYDFGIPELQDGIDFAIVAMGVFGFAEIMTN FT LEQKENRVDITDKIGSLYPNFQEFKEAAPAVVRGTALGSALGILPGGGAVLSSFASYTL FT EKKISKNPERFGKGHPAGLAGPESANNAAAQTSFIPLLTLGIPGNAVMALMVGAMTIHN FT IQPGPQVMTSHPELFWGLIASMWIGNLMLVVLNLPLIGLWVKLLKVPYRILFPAILVFC FT TIGVYSLNYNTFDIFMTAAFGVVGYVWAKLKCEGAPLLLGLVLGPMMEENFRRALLLSR FT GDFSTFVTRPLSATLLAVALFLVVLVALPAIRKKREETFVEEE" FT misc_feature 261246..262505 FT /note="HMMPfam hit to PF01970, Integral membrane protein FT DUF112, score 7.1e-117" FT misc_feature join(261249..261317,261330..261398,261408..261476, FT 261513..261581,261624..261677,261696..261749, FT 261807..261860,262140..262208,262266..262334, FT 262347..262415,262581..262649) FT /note="11 probable transmembrane helices predicted for FT BPP3776 by TMHMM2.0 at aa 20-42, 47-69, 73-95, 108-130, FT 145-162, 169-186, 206-223, 317-339, 359-381, 386-408 and FT 464-486" FT misc_feature complement(262753..262760) FT /note="Duplication due to IS1001 insertion" FT repeat_region 262761..262773 FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT repeat_region complement(262761..264067) FT CDS complement(262764..263984) FT /transl_table=11 FT /locus_tag="BPP3777" FT /product="transposase" FT /note="transposase for IS1001 element" FT /db_xref="GOA:Q7TTN6" FT /db_xref="InterPro:IPR002560" FT /db_xref="UniProtKB/TrEMBL:Q7TTN6" FT /protein_id="CAE39060.1" FT /translation="MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCE FT QCGARCRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRYQRVT FT DRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPDWSKIEYLAMDEFA FT LHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQLPPGAAQRIKAVAIDMTTAYEL FT EIQAHSPQAEIVYDLFHVVAKYGREVIDRVRVDQANQLRQDRPARRIIKSSRWLLLRNR FT DNLDRQQAVRLDELLQANQPLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGI FT AALNTFAQRLKGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRA FT AFPGNAR" FT misc_feature complement(262905..263894) FT /note="HMMPfam hit to PF01610, Transposase, score 7.9e-128" FT repeat_region complement(264055..264067) FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT misc_feature complement(264068..264075) FT /note="Duplication due to IS1001 insertion" FT CDS 264266..265873 FT /transl_table=11 FT /locus_tag="BPP3778" FT /product="putative gamma-glutamyltranspeptidase" FT /EC_number="2.3.2.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP3052" FT /db_xref="GOA:Q7W490" FT /db_xref="InterPro:IPR000101" FT /db_xref="UniProtKB/TrEMBL:Q7W490" FT /protein_id="CAE39061.1" FT /translation="MMKFDWNNPYPSTRIPVFARNVVATSHPLAAQAGLRILALGGNAA FT DAAVASAATLALVEPASNGLGSDCFALVWDGARLHGLNASGTAPAAWSPGYFQRKHQGA FT IPLRGWDSVTIPGCVAGWASLHDKLGSLPFADVLAPAIEYAERGFAVPPTVQRRWADQV FT DPLRSLPGFAEHFLPHGRAPEVGEHFVLAGAAATLRRIAASGGRDFYEGETAQKLVAHA FT QAHEAALTLGDLRDYAPQWVEPISQAYRGHALHQLPPNGQGLAALIALGIVEHFDLASR FT PAEHPDTQHILIEAMKLAFADVHAHVADAAHMRIRVEQLLDPAYLAERARLIDLRRARV FT YNAAQAPQGGTVYLACADRNGMMVSFTQSNYMGFGSGIVVPGTGISLQNRGCCFSMDPD FT HPNVVGGGKRPFHTGIPAFLTQDGAPLMSFGIMGGNMQPQGHLQALVRMLDYRQQPQAA FT CDAPRWKWNRGLSVDIEAAMPAQVTDALRARGHIVEVAAPTDKDFGSGQFIWRLGDPAV FT DGYVAASDSRRDGLAAGF" FT misc_feature 264368..265858 FT /note="HMMPfam hit to PF01019, FT Gamma-glutamyltranspeptidase, score 6.5e-158" FT CDS 265929..266837 FT /transl_table=11 FT /locus_tag="BPP3779" FT /product="putative oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3053" FT /db_xref="GOA:Q7W489" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W489" FT /protein_id="CAE39062.1" FT /translation="MATIGSKTYDTTTPRNVAFLGLGVMGLPMAGHLARAGHQVTVYNR FT TAAKAQAWAAEFGGKAAAATPREAAAGAQIVFCCVGNDDDLRSVVLGADGAFAGMQAGA FT VFVDHTTASADVARELHAAARELNLQFIDAPVSGGQAGAVNGALTIMCGGDSATFEDIK FT PVAHAFGRAVTLVGPPGAGQLAKMVNQVCIAGVVQGLSEAIAFGQTAGLDMKLVLDVIS FT KGAAQSWQMENRGATMVDDQFDFGFAVDWMRKDLGLVLAEARNNGARLPLTALVDQFYG FT DVQKMGGNRWDTSSLIKRLRD" FT misc_feature 265968..266462 FT /note="HMMPfam hit to PF03446, NAD binding domain of FT 6-phosphogluconate dehydrogenase, score 2e-05" FT misc_feature 265983..266018 FT /note="PS00895 3-hydroxyisobutyrate dehydrogenase FT signature." FT CDS complement(266886..267515) FT /transl_table=11 FT /gene="acpD" FT /locus_tag="BPP3780" FT /product="acyl carrier protein phosphodiesterase" FT /EC_number="3.1.4.14" FT /note="ortholog of Bordetella pertussis (BX470248) FT BP0497+BP3054" FT /note="Similar to Escherichia coli acyl carrier protein FT phosphodiesterase acpd or b1412 SWALL:ACPD_ECOLI FT (SWALL:P41407) (200 aa) fasta scores: E(): 3.5e-29, 46.97% FT id in 198 aa, and to Yersinia pestis acyl carrier protein FT phosphodiesterase acpd or ypo2323 SWALL:Q8ZE60 FT (EMBL:AJ414152) (201 aa) fasta scores: E(): 9.6e-31, 50.26% FT id in 191 aa" FT /db_xref="GOA:Q7W488" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/Swiss-Prot:Q7W488" FT /protein_id="CAE39063.1" FT /translation="MKTLVILSSILGDRSNSKQLADHLLARLKQSEPGGTVKIRDLAAD FT PVPYFDGATVGALFTPAEARNAEQQRIAALSDDLVAELFDADRIVFAVPVYNFNLPAQF FT KSYIDHIARAGVTFRYTAEGKPEGLVQGKQVLMLIARGGKSEGTPDDTMTPYLKQMLAF FT LGMTDVTFIAAEGMAMGELAAQEGLALARQRIDALSLDARQGLAAA" FT CDS 267637..268560 FT /transl_table=11 FT /locus_tag="BPP3781" FT /product="LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0498" FT /db_xref="GOA:Q7W487" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W487" FT /protein_id="CAE39064.1" FT /translation="MQDLNDLYYFAQVVEQGGFSAASRVLDIPKSRLSRRISQLEDRLG FT VRLLQRTTRRLRLTTAGERYLHYCQEMTASARAAEDAMRQLQSEPAGPVVVSCPVSIAQ FT QMLAPLLPEFLDAWPSVSVQLLVTNRRVDVIREGVDLALRVRTKLDTDAELVVKHLGIA FT SGTLVASPAYLQRHGTPETPQELASHRTLSFNDPQNEVRWPLTNQRGESVDVAVQPVLA FT SNDFIVLTQAAVRGRGIALLPSMASEAELRRGELVRVLPDWRSPEGIVHCIYPSRRGMM FT PAVRAFLDFLAKRVPPLVRQSDTARP" FT misc_feature 267646..267825 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 5.6e-22" FT misc_feature 267895..268524 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 6.5e-46" FT CDS complement(268569..268967) FT /transl_table=11 FT /locus_tag="BPP3782" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0499" FT /db_xref="GOA:Q7W486" FT /db_xref="InterPro:IPR010261" FT /db_xref="UniProtKB/TrEMBL:Q7W486" FT /protein_id="CAE39065.1" FT /translation="MFPLLIRNLRHLLGLPAGADEPVTSLAIDEQWAVHIGCEDDMVTV FT LLPLGPAPDPLPGAALVNSLAQWPPVLLDLSEQGEAILWAREHVGRLTAEQLHALLVRV FT AARAAALMAPAAAPPAPQGTAEVAGRKA" FT CDS 269210..271183 FT /transl_table=11 FT /locus_tag="BPP3783" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0500" FT /db_xref="PDB:2JPF" FT /db_xref="UniProtKB/TrEMBL:Q7W485" FT /protein_id="CAE39066.1" FT /translation="MLSNNVNPVVGLSYRPLPETPPSGQAAAHPSMRLLEPNNDEFVRS FT VASPRLRHSSEALREVKHDVRQFQASGDRSLQQLRDLEVALNHWEASQPKEFAKRGGMV FT AELRTAIDAYKQQLQEHAPSHANLDVKWLDGLRAGSMALQGDVKVWMQNLEDLHTRRPD FT EFTARLQQSTDALYSHLEAQWAKQHGTPPTASDVVGMPQWQEYTAMLRERFAGLDTIRP FT NLTAEENGVAILKTQTQLLALQRAQEALQASLADGVSHQGDVGLLRTQLLAGMVEGLIA FT LQQADDDSALWSRAPAADSGGRLSVESGAKASADFEAPASKGELLRGKGISGEAVLEAF FT ANIEMSVSGSRAGAAGEAEGSLRLYGESTARAEVSGSFEPSALSASIGREEADGDTEAS FT SNAVLSLNVSAELSSKLGLEAQGSVTLGSLLKLDAEGRAEVGASAEVSGTAAIDKRTDG FT LGVRLESQAEAFVGLKAEGTLTANLLHSKYAEAHGLTASVTGSANVGLGATAEGKLVAS FT PGQFEMGGEVGTTLGVGGNIGWNSKVDVNASTAYAYELASAAMARFDALRASQLDHDAK FT TSGNESQLNRLAASLQSHIDATSHKLDALNSAGVEHRIRKVDGFAGDGAQAAAGLAAQM FT ALVGTGADLSHDIKITALNLRA" FT CDS complement(271209..272720) FT /transl_table=11 FT /locus_tag="BPP3784" FT /product="two component sensor kinase" FT /note="ortholog of Bordetella pertussis (BX470248) FT BP3351+BP0501" FT /db_xref="GOA:Q7W484" FT /db_xref="HSSP:1BXD" FT /db_xref="InterPro:IPR003594" FT /db_xref="UniProtKB/TrEMBL:Q7W484" FT /protein_id="CAE39067.1" FT /translation="MGIRALLISLLLPGVVVLLVIDSWNDYRTLAAITNEAYDSALLEP FT ARVLESSLEFAADGTLQVATPLYAQVMLESKAGMRKYYRIEEIDPPWPENLPGMPREPG FT RALSGMPEMPRPPYWPRSNGQPVFFDAVYRNDPVRAVAVVRDLYYRNQHRQVLVVVAES FT IGKRVEAEASAQRQEVLRDTRMLALVALLVWWGVNWALRPLVRLRNDIRTRRPDDLTPL FT DATRVPSEVAPLVEAVNHHIARHRRVLDEQSQFLADASHQLRTPLAIMLTQAQYALRER FT DPVRVQEGLRAIVDQLGRTRRLTEQLLSLAHASQADAPPRQELDLNDVARDVVLQYLPL FT AHEKQQDLGWVDARGDEAEGASDTAVVPVWGSEVELHEALSNLVHNAINYAPAGAHITV FT SVVRYPGRAEVQVADDGPGIEPLLRARAFARFDRMAGDRHASSSGSGLGLSIARAYARR FT NDGDIELRDGEPNAQGGIGLCAVFWIPLYDQSAPADEAEASRRSG" FT misc_feature complement(271260..271610) FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90-like ATPase, score 4.3e-28" FT misc_feature complement(271773..271970) FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 7e-11" FT misc_feature complement(272649..272705) FT /note="1 probable transmembrane helix predicted for BPP3784 FT by TMHMM2.0 at aa 5-24" FT CDS complement(272752..273405) FT /transl_table=11 FT /locus_tag="BPP3785" FT /product="two component response regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP3350" FT /db_xref="GOA:Q7W483" FT /db_xref="HSSP:1KGS" FT /db_xref="InterPro:IPR001867" FT /db_xref="UniProtKB/TrEMBL:Q7W483" FT /protein_id="CAE39068.1" FT /translation="MAAWLMRALAQSGFMPDHAPDARTAEGLMAGNEYDAVVMDLRLPD FT KHGLVLLREMRNRDDRTPVLLLTAQGALQDRVRGLNLGADDFLTKPFALEELEARLTAL FT VRRSRGRQPPRLQCGSLSYDGESRAFTLDGALLFLTPREHAALAALLTRSGYPVDKSQL FT FGKVFTHESEANPDAIEVVLHRLRKKLTGSDVRIVTVRGLGYMLESTVSESSES" FT misc_feature complement(272794..273003) FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal, score 2.6e-11" FT misc_feature complement(273079..273405) FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 2.7e-19" FT CDS complement(273419..273991) FT /transl_table=11 FT /gene="nudH" FT /locus_tag="BPP3786" FT /product="putative Nudix hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3349" FT /db_xref="GOA:Q7W482" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/Swiss-Prot:Q7W482" FT /protein_id="CAE39069.1" FT /translation="MLDREGYRPNVGIILVNGKNEVFWGKRIREHAWQFPQGGIKYGES FT PVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVPDHFVRREWRGHYKGQKQIWFLLRL FT VGRDSDVCLRATQHPEFDAWRWSQYWVPLDAVIEFKRDVYTQALNELAVILFRRHHETR FT YLRQRVHGPRSTDNPSSETDGHAHIAG" FT misc_feature complement(273542..273973) FT /note="HMMPfam hit to PF00293, NUDIX domain, score 1.3e-22" FT misc_feature complement(273821..273880) FT /note="PS00893 mutT domain signature." FT misc_feature complement(273923..273952) FT /note="PS00659 Glycosyl hydrolases family 5 signature." FT CDS 274057..275787 FT /transl_table=11 FT /gene="proS" FT /gene_synonym="drpA" FT /locus_tag="BPP3787" FT /product="prolyl-tRNA synthetase" FT /EC_number="6.1.1.15" FT /note="ortholog of Bordetella pertussis (BX470248) BP3348" FT /db_xref="GOA:Q7W481" FT /db_xref="InterPro:IPR007214" FT /db_xref="UniProtKB/Swiss-Prot:Q7W481" FT /protein_id="CAE39070.1" FT /translation="MRASKYHLNTLKEAPAEAEIASHQLMTRAGMIRKLAGGIYTYMPL FT GLKVIRKIEGIVREEMNAAGAIELLMPVVQPAELWMESGRWEQYGAELLRIKDRHQRDF FT VLQPTSEEVITDIARNEIQSYRQLPLNFYHIQTKFRDERRPRFGLMRGREFTMKDAYSF FT DRDEAGAQRSYDIMYAAYQRIFQRLSLEFRAVAADTGSIGGSRSHEFQVIADTGEDLIV FT YNPESDYAANIELAEAPALLAARAAPAQDLEAVPTPGAAKCEDVAKLLGLPLARTIKSI FT VLAVDQPEGPAQVWLLLLRGDHELNEIKAGKLPGLAGFRFATETEIVDHFGCKPGYLGP FT IKTARPVHVVADRTVANMADFVCGANREDYHYQGANWGRDLPEPELVADLRNVVEGDPS FT PDGKGALSIQRGIEVGHVFFLGTKYSEALKATFLDDNGKPAVLQMGCYGIGVTRIVGAA FT IEQNHDARGIIWPRAIAPYEVVICPVGWGKSETVRDTALALYEALRARGVDVMLDDRDS FT RPGVMFAEWELIGVPLRVTVGERGLNEGVVELQARREAEAAKVPVDQALAQTLAKLDLL FT " FT misc_feature 274168..274632 FT /note="HMMPfam hit to PF00587, tRNA synthetase class II FT core domain (G, H, P, S and T), score 6e-56" FT misc_feature 274471..274533 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT misc_feature 275470..275772 FT /note="HMMPfam hit to PF03129, Anticodon binding domain, FT score 7.4e-26" FT CDS 275840..276268 FT /transl_table=11 FT /locus_tag="BPP3788" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3347" FT /db_xref="GOA:Q7W480" FT /db_xref="InterPro:IPR014166" FT /db_xref="UniProtKB/TrEMBL:Q7W480" FT /protein_id="CAE39071.1" FT /translation="MTDPKFSESVLDIRVYYEDTDAGGVVFYANYLKFLERARTEWLRG FT LGVNQSDLAEREHRLFVVHSLDMSYRKPARLDDLITIRSRITRIGRASIHFAQRAERNA FT ELLAQGNIQICCVDSIRMRPAELPDDIRAKLKFIQIQE" FT misc_feature 275906..276250 FT /note="HMMPfam hit to PF03061, 4-hydroxybenzoyl-CoA FT thioesterase, score 5.1e-38" FT CDS 276271..276951 FT /transl_table=11 FT /locus_tag="BPP3789" FT /product="putative TolQ-like translocation protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3346" FT /db_xref="GOA:Q7W479" FT /db_xref="InterPro:IPR002898" FT /db_xref="UniProtKB/TrEMBL:Q7W479" FT /protein_id="CAE39072.1" FT /translation="MQVTNDMSLLSLVSHASVPVQLIMLLLLGISIMSWTYIFAKRLAI FT KRAHQQTRRFEDDFWSGGDLAMLQQAVATRRDEQGALARIFDAGMTEFLKARRTSAAGD FT VNAVLDGPRRAMRAAYQREMDSLESHLNFLASAGSVSPYIGLLGTVWGIMHAFIGLSNM FT QQATLAAVAPGIAEALIATAIGLFAAIPAVVAYNRFTNDIDRLSIRFDSFVDEFLNILQ FT RQVR" FT misc_feature join(276328..276387,276664..276732,276790..276858) FT /note="3 probable transmembrane helices predicted for FT BPP3789 by TMHMM2.0 at aa 20-39, 132-154 and 174-196" FT misc_feature 276496..276915 FT /note="HMMPfam hit to PF01618, MotA/TolQ/ExbB proton FT channel family, score 2.4e-49" FT CDS 276951..277409 FT /transl_table=11 FT /locus_tag="BPP3790" FT /product="putative TolR-like translocation protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3345" FT /db_xref="GOA:Q7W478" FT /db_xref="InterPro:IPR003400" FT /db_xref="UniProtKB/TrEMBL:Q7W478" FT /protein_id="CAE39073.1" FT /translation="MPSVRSNGRAGRRMKADINVVPYIDVMLVLLVIFMVTAPLITPGL FT IELPSVGQAADVPAKPLEVQISEDGKIALRMREPGATPQDIARTELINQVRSRITAETP FT VVIAADGKVPYESVVKVMDELRSSGITRLGLLVDQGAGAETQQPARKR" FT misc_feature 276981..277370 FT /note="HMMPfam hit to PF02472, Biopolymer transport protein FT ExbD/TolR, score 3.3e-17" FT misc_feature 277008..277076 FT /note="1 probable transmembrane helix predicted for BPP3790 FT by TMHMM2.0 at aa 20-42" FT CDS 277446..278567 FT /transl_table=11 FT /locus_tag="BPP3791" FT /product="Proline-rich inner membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3344" FT /db_xref="GOA:Q7W477" FT /db_xref="InterPro:IPR006260" FT /db_xref="UniProtKB/TrEMBL:Q7W477" FT /protein_id="CAE39074.1" FT /translation="MTPPLIRSDRSAPPSPATQDNRKALGLAVLVHLLLLLVLIFGVNW FT RSENPGPVQVELWADGDSPVNPPPDEVKPQPKPEPQPEPEPKPQPEPEPEPEPPPPPPP FT PPPPQPEVQPKEQPDPEIALEEARKKREQEEKARQAAEAAKEKARLEEERRQAELKEKQ FT RLEQERRAAEKAAAEKAAAEKAAAEKQAAEKKAKEEAAKKAEAEKKAEAEKKAKEEAAK FT KAAAEKAAAEKAAAEKKAKEEAAKKAAADKALRDAFRNDALGAAGIPGGTADRNQAGGG FT RDSGYGAKVRACVQPGVAYPPPPRAGSANPTAQYRVQLGSDGKVNGVTLTSSSGNPGFD FT RAVETGIRRCNPFPKPSTGRYEPIIDVVYRMYD" FT misc_feature 277515..277574 FT /note="1 probable transmembrane helix predicted for BPP3791 FT by TMHMM2.0 at aa 24-43" FT CDS 278575..279900 FT /transl_table=11 FT /locus_tag="BPP3792" FT /product="putative TolB-like translocation protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3343" FT /db_xref="GOA:Q7W476" FT /db_xref="HSSP:1C5K" FT /db_xref="InterPro:IPR007195" FT /db_xref="UniProtKB/Swiss-Prot:Q7W476" FT /protein_id="CAE39075.1" FT /translation="MPAMTPAFRRADLTGFLRTYGAALILLLAAMLAWQPAQAQLRVDI FT SGTGATQYPVAIADFAVDDTHGRALAEVIRADLTRTGQFRLINAADSGLNVDSQVAHDD FT WRAKGADFLAYGSITRGPDGRYDVRYRLADTVKKGQLDGVAFSGTEQELRRVAHQIADR FT IYEKITGVRGVFSTRIAYVLKRGSTYELQVADADGQNPQVALRSREPIISPSWSPDGSR FT LAYVSFESGKPVVYVHTLATSARIPVANFKGNNSAPAWSPDGSQLAVALTRDGLSQIYI FT VSAGGGSNMRRITRSPGIDTEPNFTPDGRSIIFTSDRSGGPQIYQTGLDGGDARRLTFN FT GGYNISPRISPDGSTLLYVARRDGAFRIASLNLSSGSETLLTDGRDDQSPSFAPNGMQV FT LYAAIQNGRSVLAGVSSDRRVRQTLSVLNGEIREPTWGPFTR" FT misc_feature 278575..278691 FT /note="Signal peptide predicted for BPP3792 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.980) with cleavage site FT probability 0.974 between residues 39 and 40" FT misc_feature 278611..278679 FT /note="1 probable transmembrane helix predicted for BPP3792 FT by TMHMM2.0 at aa 13-35" FT CDS 279932..280429 FT /transl_table=11 FT /locus_tag="BPP3793" FT /product="putative peptidoglycan-associated lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3342" FT /db_xref="GOA:Q7W475" FT /db_xref="HSSP:1OAP" FT /db_xref="InterPro:IPR006690" FT /db_xref="UniProtKB/TrEMBL:Q7W475" FT /protein_id="CAE39076.1" FT /translation="MKSRIAKSLTIAALAATLAACSSVPLDDKAGQAGGSGQGSASGQI FT LDPFNPQSILAQQRSVYFDFDSYTVSEQYRGLVETHARYLASNNQQRIKIEGNTDERGG FT AEYNLALGQRRADAVRRMMTLLGVSDNQIETISFGKEKPKATGSSEADFAENRRADIVY FT QR" FT misc_feature 279932..280009 FT /note="Signal peptide predicted for BPP3793 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.348 between residues 26 and 27" FT misc_feature 279962..279994 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 280115..280402 FT /note="HMMPfam hit to PF00691, OmpA family, score 1.8e-31" FT misc_feature 280214..280348 FT /note="PS01068 OmpA-like domain." FT CDS 280516..281205 FT /transl_table=11 FT /locus_tag="BPP3794" FT /product="putative periplasmic protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3341" FT /db_xref="GOA:Q7W474" FT /db_xref="InterPro:IPR013026" FT /db_xref="UniProtKB/TrEMBL:Q7W474" FT /protein_id="CAE39077.1" FT /translation="MRDQALPLRTLVITASLALAAMAAPAHAFADDEARRAILDLRQQV FT QQQNEQNQRARLQLADQLQAMQQEIAQLRDQLELISRQQPNAQGGQPQHAGNPPGVTAV FT DQQEQAAYDGAIDLFRKGQYKDAAESLAAFIALYPNSQLAPTAQFYLGSSRYAMKDFKG FT AIEQLNNLVQNAPTNARAPDALLVIAGSQIELNNRAGAKATLQRIVRDYPTTPAANTAK FT SRLQLLQ" FT misc_feature 280516..280605 FT /note="Signal peptide predicted for BPP3794 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.506 between residues 30 and 31" FT misc_feature 280534..280602 FT /note="1 probable transmembrane helix predicted for BPP3794 FT by TMHMM2.0 at aa 7-29" FT CDS 281205..282254 FT /transl_table=11 FT /locus_tag="BPP3795" FT /product="putative ABC transport inner membrane permease FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3340" FT /db_xref="GOA:Q7W473" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:Q7W473" FT /protein_id="CAE39078.1" FT /translation="MAEAAPDAVRAYGRLLRRRRWLMAALAAAACAALAADAALGPAGL FT TLADLWRTLLQPGAADTAARVIVWDIRLPQAAMAAIVGMALGLAGAEMQTILNNPLASP FT FTLGVSSAAALGASLAIVLHVGVPGVAAPWLVPLYAFLFAALAGLLLDQVARHRAIGAP FT AIVLFGIALVFTFNALISLIQFTASAQALQNLVFWTMGSMARADWASVGILALACALAL FT PLALRHAWRLTALRLGETRAASFGVDVRRLRLAALCRISLLAALAVAFAGTIGFIGLVA FT PHIARRLFGEDHRFYLPGSALTGALILSLAASVSKSLVPGVIVPVGIVTSLVGIPFFVA FT VLLRRPQSL" FT misc_feature 281205..281309 FT /note="Signal peptide predicted for BPP3795 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.749 between residues 35 and 36" FT misc_feature join(281265..281333,281415..281474,281511..281579, FT 281589..281657,281694..281762,281826..281894, FT 281982..282050,282087..282146,282165..282233) FT /note="9 probable transmembrane helices predicted for FT BPP3795 by TMHMM2.0 at aa 21-43, 71-90, 103-125, 129-151, FT 164-186, 208-230, 260-282, 295-314 and 321-343" FT misc_feature 281325..282236 FT /note="HMMPfam hit to PF01032, FecCD transport family, FT score 1.2e-80" FT CDS 282251..283045 FT /transl_table=11 FT /locus_tag="BPP3796" FT /product="putative ABC transport ATP-binding subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP3339" FT /db_xref="GOA:Q7W472" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W472" FT /protein_id="CAE39079.1" FT /translation="MNAPGLAIEGLGVAYGARTVIAGLSLGPLPHGTLTALLGPNGSGK FT STLLKAVAGLLPARGGAIALDGQRLDQADLAQRAQQVAYLPQGLPADVHLRVFESVLVA FT ARAHGGEAAGQIGPPAIAALLERLGIGHLALQFLDELSGGQKQLVGLAQALIRRPRVLL FT LDEPLSALDPNYQFHVMDLLCQETRDHGLITIAALHDINIALRHADQALLIRAGELAAA FT GEPAAVIDAPMLARVYGIQARVERCSRGHPHVLVDGVAGPVR" FT misc_feature 282344..282901 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.7e-46" FT misc_feature 282365..282388 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 282671..282715 FT /note="PS00211 ABC transporters family signature." FT CDS 283214..284200 FT /transl_table=11 FT /locus_tag="BPP3797" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3338" FT /db_xref="GOA:Q7W471" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W471" FT /protein_id="CAE39080.1" FT /translation="MSGFRCFTLARLIAPVFAASALAAAPASAADFPSRPIKLVVPAPP FT GGAGDISARAIAEGMGAKLGQPVIVENRPGAATLLGLRAVVRDQPDGYTMALLPVTGVA FT IATTMYDNVPSLEKDFSYVAGVVNAPHMLVAPASHQSATVAELVARLKAAPGRYNYASQ FT GVGSLSHLESALFLDGSKAQAEHVPYKGSAEALPGLMSGETAFMFDSVASVRTHVAAGK FT LVALGTSASGRVPQFPDAPTMAELGIADLKADNPFAFVAPAGTPPAVIAVLTDAVRTAL FT ADPKIIETLTRAGMVPAFQPPKDIARIAAEDLAFWPGMARRVGAKKE" FT misc_feature 283214..283300 FT /note="Signal peptide predicted for BPP3797 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.981 between residues 29 and 30" FT misc_feature 283232..283300 FT /note="1 probable transmembrane helix predicted for BPP3797 FT by TMHMM2.0 at aa 7-29" FT misc_feature 283367..284188 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 2.9e-79" FT CDS join(284256..285416,285418..285807) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP3798" FT /product="putative gamma-glutamyltranspeptidase FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP3337" FT /db_xref="PSEUDO:CAE39081.1" FT misc_feature join(284316..285416,285418..285792) FT /note="HMMPfam hit to PF01019, FT Gamma-glutamyltranspeptidase, score 7e-150" FT CDS complement(285818..286273) FT /transl_table=11 FT /locus_tag="BPP3799" FT /product="putative MarR-family transcriptional regulator" FT /note="Similar to Rhizobium loti transcriptional regulator FT mll8302 SWALL:Q983J5 (EMBL:AP003013) (146 aa) fasta scores: FT E(): 3.8e-05, 29.5% id in 122 aa" FT /db_xref="GOA:Q7W470" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q7W470" FT /protein_id="CAE39082.1" FT /translation="MDKSTQAASRLLAFRFLSTSQLLYRSLELMMGRELGLSVRQWRVM FT FFLANDGVGSVQEIADFCRYDKSQVSRALQELTDKAYVNRVPGVHDRRKVLASLTPAGI FT EVYRQGLRISLARDERMKRALSADELAAFNATLDKLAEQAQAIMDEL" FT misc_feature complement(285854..286165) FT /note="HMMPfam hit to PF01047, MarR family, score 9.7e-16" FT CDS 286364..287632 FT /transl_table=11 FT /locus_tag="BPP3800" FT /product="putative amino acid oxidoreductase" FT /note="Similar to Rhizobium meliloti putative FT oxidoreductase protein r00742 or smc00797 SWALL:Q92RU9 FT (EMBL:AL591784) (417 aa) fasta scores: E(): 2.2e-74, 50.23% FT id in 420 aa, and to Escherichia coli O157:H7 D-amino acid FT dehydrogenase small subunit DadA or DadR or b1189 or z1952 FT or ecs1684 SWALL:DADA_ECOLI (SWALL:P29011) (432 aa) fasta FT scores: E(): 1.6e-16, 27.5% id in 429 aa" FT /db_xref="GOA:Q7W469" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q7W469" FT /protein_id="CAE39083.1" FT /translation="MEMGSMSKEIIVLGAGMVGVCAALHLQRRGHRVTLVDRREPGLET FT SYGNAGIIQREAVEPYAFPRGLATLLRVALRRGFDIRYHWGALPALLPRLAAYYAASAP FT RRYRPIALAYGQIIAHCTDEHQALIDASGCGDLIRRTGFRSLFRGATGFGAATREARRL FT ADECGVALKIESASDLEQAEPALRPGVSAGAIHWQEPWSVADPGALVAAYAERFQAEGG FT TVLCGDAGTLQRTGAGWSVQVDEPAGPARREAGHAVVALGPWSDGLLRRFGYRLPLFVK FT RGYHRHYQCAAIPSMPVQDADCGFVLSPMQRGLRLATGAELARQDAPPTPVQLARAETA FT ARDLYALGEPAEPDFWMGSRPCTVDMLPVIGAAPRHPGLWFNLGHGHQGFTLGPVSGRL FT LAELVDGAPTVVDAAPYSPARFG" FT CDS complement(287645..288145) FT /transl_table=11 FT /locus_tag="BPP3801" FT /product="conserved hypothetical protein" FT /note="Similar to Ralstonia solanacearum hypothetical FT protein rsc0260 rsc0260 or rs00695 SWALL:Q8Y2S5 FT (EMBL:AL646058) (170 aa) fasta scores: E(): 8.3e-47, 79.14% FT id in 163 aa" FT /db_xref="InterPro:IPR007214" FT /db_xref="UniProtKB/TrEMBL:Q7W468" FT /protein_id="CAE39084.1" FT /translation="MAEDQPNSLPESALRVARLLREIGHDRPVIMLPETGKTSAEAAAG FT LGCEVAQIAKSIIFRRAADDAPVLVIASGVNRVDEAKVAARVGGLAKADAKFVRAMTGY FT AIGGVCPIGHAVRPVMLLDEDLFRYDSLWAAAGHPHAVFNLTPRQLADMTGAPVADVAQ FT RAA" FT CDS 288265..289071 FT /transl_table=11 FT /locus_tag="BPP3802" FT /product="putative hydrolase" FT /note="Similar to Pseudomonas aeruginosa probable hydrolase FT pa2745 SWALL:Q9I098 (EMBL:AE004702) (287 aa) fasta scores: FT E(): 6.5e-19, 47.05% id in 272 aa" FT /db_xref="GOA:Q7W467" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7W467" FT /protein_id="CAE39085.1" FT /translation="MRSEPQLSLQTAAIDGYPIAYAEAGQGAPMVLIHGSLCDCRYWKP FT QLGPLGRSFRVLAPSLRHYWPETWDGAGDDFSVVRHAQDIVEFIENVCGEPAHLVGHSR FT GGRVALETALRRPDLARSLVLADPGLPLPGGDDSRGGFRQRALALIRDGDTDAGLALFI FT DTVTGPDTWRRMVPWFKDMVRDNANTLLGQAREQPGALTPQTLRTLALPTLLIGGALSP FT APYPEVLDLLEGTWPHAERTAIAGSSHGMNLGNPRAFNGAIEAFLA" FT misc_feature 288424..289065 FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold, FT score 1.9e-08" FT CDS 289294..290292 FT /transl_table=11 FT /locus_tag="BPP3803" FT /product="conserved hypothetical secreted protein" FT /note="Similar to Comamonas testosteroni OrfJ protein orfJ FT SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): FT 2e-33, 34.95% id in 329 aa" FT /db_xref="GOA:Q7W466" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W466" FT /protein_id="CAE39086.1" FT /translation="MAIHKRTRPYLASAVGAMLCAFAAPVCAQATYPSRPVNIVVQTPP FT GGPLDAAMRVVAKQLEQRFGNNASVIVENKPGANGLIATKFVAQSAPDGHTLLGVSVSH FT VANPSIHRNMPFDPLQELKGIAHLGVARNVFVASAVAPPRSIEEFVAWAKENPDKVTFG FT SGGVGSGGHLMAELIAQSTGIRMTHVAYKGGTAMLPDLVAGRVLFSVDTLKNMAPVVEA FT GSVRILGVTNAQRWPDLASVPTFVESGYPQVALNSWIGIVAPAKTPPEVMARLERELAS FT IASLPEVREQFSGFGLSILPEPLVGEQFQAFMESEKAMWKKIADAADIKVD" FT misc_feature 289294..289377 FT /note="Signal peptide predicted for BPP3803 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.750 between residues 28 and 29" FT misc_feature 289447..290280 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 2.4e-75" FT CDS 290363..292027 FT /transl_table=11 FT /locus_tag="BPP3804" FT /product="putative fatty acid CoA ligase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0423" FT /db_xref="GOA:Q7W465" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q7W465" FT /protein_id="CAE39087.1" FT /translation="MHGGNDIKAHMADFTLDDIKQRSMAEITAMQARRHGEKTFLHFLP FT RDERISYAGFDRRSSAVGRGLKAHGVQAGAHVGLILD |