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EBI DbfetchID BX640430; SV 1; linear; genomic DNA; STD; PRO; 348014 BP. XX AC BX640430; XX DT 09-AUG-2003 (Rel. 76, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Bordetella parapertussis strain 12822, complete genome; segment 8/14 XX KW complete genome. XX OS Bordetella parapertussis OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. XX RN [2] RP 1-348014 RA Sebaihia M.; RT ; RL Submitted (06-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: RL ms5@sanger.ac.uk XX RN [3] RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., RA Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., RA Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., RA Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., RA Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., RA Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., RA Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., RA Barrell B.G., Maskell D.J.; RT "Comparative analysis of the genome sequences of Bordetella pertussis, RT Bordetella parapertussis and Bordetella bronchiseptica"; RL Nat. Genet. 35(1):0-0(2003). XX DR EMBL-CON; BX470249. DR RFAM; RF01118; PK-G12rRNA. DR SILVA-LSU; BX640430. DR SILVA-SSU; BX640430. XX FH Key Location/Qualifiers FH FT source 1..348014 FT /organism="Bordetella parapertussis" FT /strain="12822" FT /mol_type="genomic DNA" FT /db_xref="taxon:519" FT CDS 365..865 FT /transl_table=11 FT /locus_tag="BPP2288" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1915" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q7W857" FT /protein_id="CAE37586.1" FT /translation="MKQQHESGIAVVVGPDEGDSFWQPVPANGFVRTLLNRANTGASVD FT FSAGTQTVAPGCHVREHFHDDREEVIFITEGTGTALIDGVEHPLAPGACLFLGKSRKHS FT FLNAGPEPLSFFWILMPGGLDDFFRQIGRARQPGEPAPQPFARPADIDRIEANTVFGWT FT AKS" FT misc_feature 641..664 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 907..1221 FT /transl_table=11 FT /locus_tag="BPP2289" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1916" FT /db_xref="InterPro:IPR012577" FT /db_xref="UniProtKB/TrEMBL:Q7W856" FT /protein_id="CAE37587.1" FT /translation="MFIEERDYRIKPGKAGLFVATYEAHGLALQKKYLGRFLGYFMSEI FT GELNHVVAWWAYDSLDERDAARSRMLADPQWQAYLERVTDLIDLQQTRILKPVSFSPIQ FT " FT CDS 1231..2172 FT /transl_table=11 FT /locus_tag="BPP2290" FT /product="putative 3-hydroxyacyl-CoA dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1917" FT /db_xref="GOA:Q7W855" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W855" FT /protein_id="CAE37588.1" FT /translation="MNHVAVIGGGIIGASWAVVFARRGLEVTIVERDAACLAGLPARLA FT GMIERSASLLGAGEQPGDVAARIGATDALAAAVGRADYVQEAVSENLALKRTLFAELDA FT LAPAHALLASSTSTYGASQFTEALAGRARCLVAHPMTPPHLSPVVEMAASAWTDPQVLA FT GAEAFMRSLGQHPVRIRKEIPGFVLNRLQGALLMEMFRVIADDVISPADADALISQGLG FT LRWATLGPLEGVDLNAPGGIADYLQRYGHIFNDMAAGQGLPAPVDAELISALDGAMRAA FT LPLERLEAKRGWRDRAIAGVRVALHDYTGEKP" FT misc_feature 1231..1779 FT /note="HMMPfam hit to PF02737, 3-hydroxyacyl-CoA FT dehydrogenase, NAD binding domain, score 5.3e-28" FT misc_feature 1783..2070 FT /note="HMMPfam hit to PF00725, 3-hydroxyacyl-CoA FT dehydrogenase, C-terminal domain, score 0.0018" FT CDS 2169..2693 FT /transl_table=11 FT /locus_tag="BPP2291" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1918" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q7W854" FT /protein_id="CAE37589.1" FT /translation="MKLIRAVDGLNRLACWLMAGLMLGMTLCTLWQVSVRFLLTGLGWN FT VAAPWSEEVSRYLMIWIIFLGAGVACRKAQLIALELVVTLLPAPLGRALRFAALLGCLV FT FFTLMIYLGLEFMEFGAIETSPVLSMPKTWIYLAMPVGFGLMFLNTATLIAECLLQGID FT IRHASQQEAQE" FT misc_feature join(2205..2273,2337..2405,2439..2507,2565..2633) FT /note="4 probable transmembrane helices predicted for FT BPP2291 by TMHMM2.0 at aa 13-35, 57-79, 91-113 and 133-155" FT CDS 2696..3964 FT /transl_table=11 FT /locus_tag="BPP2292" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1919" FT /db_xref="GOA:Q7W853" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q7W853" FT /protein_id="CAE37590.1" FT /translation="MLSAVVLLLLLFAASIPVALSLGIAPLPALLARDVPLLAVPQTMF FT ESMDSFALMAVPFFVLAGRLMQTGGIAGRLMDLGLALIGWVKGGLGGAAVLTTMFFSTI FT CGSSSATTAAIGSVMIPEMERRGYPRPFAASVVASSGELGVILPPSVPIIIYAMLTGTS FT VAQMFVAGILPGLLIGLSLIITILIMSRLGDYGGSQRVSVGEWALNVWRALRRASLSLL FT MPVIILGGIYGGLFTATEAAVVAVAYTFVVSVFIYREIKWKDLPEIFWSSAVTSGIVLL FT IVGFASVFAYVLSLYQAPQQVAALLLGVSDNPLVFLLLVNIALLVVGLFMETFAAILIL FT APVLAPVAVSLGIDPVHFGLIVIVNLAVGMVTPPVGVNLFLVCGIARVSMERLMRPLSV FT FLGVLLLDLIIITYGPVLYARFF" FT misc_feature 2696..2758 FT /note="Signal peptide predicted for BPP2292 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.458 between residues 21 and 22" FT misc_feature join(2714..2782,2825..2893,2927..2995,3107..3175, FT 3194..3262,3368..3463,3497..3565,3608..3676,3695..3754, FT 3782..3850,3884..3952) FT /note="11 probable transmembrane helices predicted for FT BPP2292 by TMHMM2.0 at aa 7-29, 44-66, 78-100, 138-160, FT 167-189, 225-256, 268-290, 305-327, 334-353, 363-385 and FT 397-419" FT misc_feature 3080..3565 FT /note="HMMPfam hit to PF00597, DedA family, score 6.4e-05" FT CDS 3993..4976 FT /transl_table=11 FT /locus_tag="BPP2293" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1920" FT /db_xref="GOA:Q7W852" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q7W852" FT /protein_id="CAE37591.1" FT /translation="MNVVKSLFAALALAGASFGASAEPIQINIGHALGDTSSYQVAGLH FT FAELMKQKVGDKVKVTLYPSGGLGGELKLVQGARTGVVDAMIIAQASLENTVREYRVLS FT LPYLFTDYEEANRIMQGPVGDRLLDVLPKYNMVGLGWGAVYARSLASMKPVPDLAAMKG FT LKVRVIQSPGFVEAYRALGSQPTPTAYAELFLSLQNGVVDAAELSPDQTVADGFAEVIK FT YYSVTAAHQLPSLFIISKAKFDRLPEDVRKAVEEAGRESMQVAVKFQDQKLAEAFDVLK FT QRGVQVQYPDQAPLREAARGAWDQIAKAAPGGEQFLVEIEAARAAK" FT misc_feature 3993..4058 FT /note="Signal peptide predicted for BPP2293 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.986 between residues 22 and 23" FT misc_feature 4077..4922 FT /note="HMMPfam hit to PF03480, Bacterial extracellular FT solute-binding protein, family 7, score 8.4e-62" FT CDS 4973..5782 FT /transl_table=11 FT /gene="bioH" FT /locus_tag="BPP2294" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1921" FT /db_xref="GOA:Q7W851" FT /db_xref="HSSP:1A88" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7W851" FT /protein_id="CAE37592.1" FT /translation="MIRQRMTDLTVILPDGARLAARETGAGEAVLLVSGLGGTGAFWTP FT VAAGLQGRRCVVFDQRGVAGSTRGDAAVDIARLAADAWAVLDARGIERAHLVGHSTGGC FT IVQEMALSAPARAASLVLGGTWGGRNAYMQSLFAMRAALLAASPALYEQAGAYLSYPAA FT WLLAHPEAVPAAAAPWPAQRVAVVRERIAALLAYDRLDDLPGLDAPALVLGARDDQIVP FT FALQQQLARVLPGAQLRPLEHGGHFFPIVRGADYVAALLDWFGHHSL" FT misc_feature 5129..5764 FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold, FT score 9e-25" FT CDS 5779..6582 FT /transl_table=11 FT /locus_tag="BPP2295" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1922" FT /db_xref="GOA:Q7W850" FT /db_xref="HSSP:1H2H" FT /db_xref="InterPro:IPR011182" FT /db_xref="UniProtKB/Swiss-Prot:Q7W850" FT /protein_id="CAE37593.1" FT /translation="MTHRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPAL FT AGRVALLDGLPGLLAWRPDLVVEAAGQQAIAEHAEGCLKAGLDMIICSAGALADDALRA FT RLIAAAEAGGARIRVPAGAIAGLDYLQAVAGRDDAEVVYESRKPVAAWRAELPGMGIDP FT DTLAESRTLFSGPAREAALRFPKNLNVAATLALAGIGMTRTRVEVVVDPRARGNQHRIQ FT VRSPLGEMQIELVNAPSPANPKTSWLVAQSVLATIRRHLARFTIG" FT misc_feature 5779..5847 FT /note="Signal peptide predicted for BPP2295 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.986) with cleavage site FT probability 0.626 between residues 23 and 24" FT misc_feature 5788..6573 FT /note="HMMPfam hit to PF01958, Domain of unknown function FT DUF108, score 1.7e-44" FT CDS 6597..7364 FT /transl_table=11 FT /locus_tag="BPP2296" FT /product="probable short chain dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1923" FT /db_xref="GOA:Q7W849" FT /db_xref="HSSP:1GZ6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W849" FT /protein_id="CAE37594.1" FT /translation="MTQRLSGRIAIVTGAGSGIGEATARLMAREGAVVVVADKAIEAAE FT RVAQAIVAEGGRAEARQADVGEAQSVRALVDAVAARWERIDVLVNNAGYGIAATVVDTD FT EADWSALMRVNVDGVFLGCKYVIPIMQRQGAGVIVNTASAGALVGLRQRAAYCASKGAV FT AALTRAMALDHATEGIRINCVAPGTIESPYFREIYARSDDPEALRASLAARQPMNRLGQ FT PEEVAHAIVFLASDDASFATGSTLVLDGGLTAA" FT misc_feature 6612..7352 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 2.7e-87" FT misc_feature 7023..7109 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 7452..8090 FT /transl_table=11 FT /locus_tag="BPP2297" FT /product="probable TetR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1924" FT /db_xref="GOA:Q7W848" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q7W848" FT /protein_id="CAE37595.1" FT /translation="MKATPAQVPMKERIKEVATDMLIAHGSSGFRFQQIAQALDCTRGN FT IHYHYRHKHELVEDVTIEYCQRTIGHFDQIWLSDSTLSQKIQLSMQFNEMRYLKRNPQG FT DTSHPWSLIARMRLESALITPAAREALARYSHELQRSVVAGVRRAVEKGELRPDTPVEM FT VALPIIEMANSADPITRDAGRFDRLRQMYQAVDRLIHDAYGMAGHRPAP" FT misc_feature 7491..7631 FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 0.0015" FT CDS complement(8095..9048) FT /transl_table=11 FT /locus_tag="BPP2298" FT /product="LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1925" FT /db_xref="GOA:Q7W847" FT /db_xref="HSSP:1I69" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q7W847" FT /protein_id="CAE37596.1" FT /translation="MPPLPVGLAKPKALHEPSFAQLGVFHAIMITGSVSRAARLMGMTQ FT SAASKMLRQLEDDTGLRLFERQHQRLVPTPHAQGLQDSVEQLYGAYGVVQRQIDSLADP FT DTGHVNVAAIPTQATTFLPQAIKRLRERYQGITVTVEILANQPIVDRVQSGQADFGLVH FT DITPSVSTLNEDLGLQHVVCVAPAGHRYAGLPHVAAHDLRNETFLSYGPQTNFGAMLET FT AFASAGVRMPVAVEVTSSAALLALIRAGVGVGLVEPAAIAPFGATGFVIKPFLPALPVR FT SRIVRSRLRPLTRHAELLLEAYRAVVLQARPDSFQA" FT misc_feature complement(8125..8745) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.8e-35" FT misc_feature complement(8815..8994) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2.8e-21" FT misc_feature complement(8860..8952) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 9160..10284 FT /transl_table=11 FT /locus_tag="BPP2299" FT /product="putative extracellular solute-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1926" FT /db_xref="GOA:Q7W846" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q7W846" FT /protein_id="CAE37597.1" FT /translation="MKMSVPQDGWLADAAELALQSPGLTSARRRQLLGMLGAAGLASLA FT PMRPAAAAADRIVVCNWGGDAIKNQPLVWGKPYEKATGTKVEFDGTGPSFGKIRTMVES FT RNVAWDVCDANLAAGHSLGKRGYLEPIDYGVVDRNKVRPGFSSEFGVSHFIYSFVLTYD FT KKAFGDRPPRTWADFWNTKDFPGTRILPDRVLATLEAALMADGVPADASQLYPIDERRA FT LDKIAAIKDKTIFWKTGAESQQLLRQGEATMGLVWHTRATVMRCEPGSTIDFTWNQGIL FT IPAGWLVPKGNPAGRKVFDFIASTQSPESQIELLRLMGNGPANPAANALVPPELRQDNP FT TDEENFRQQVVANYTWHGDNQDRIYNEYVKVITG" FT misc_feature 9343..10278 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding protein, score 0.037" FT CDS join(10295..11206,11206..11934) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2300" FT /product="conserved hypothetical protein (Pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1927" FT /db_xref="PSEUDO:CAE37598.1" FT CDS 11937..12764 FT /transl_table=11 FT /locus_tag="BPP2302" FT /product="putative ABC transporter, permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1928" FT /db_xref="GOA:Q7W845" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W845" FT /protein_id="CAE37599.1" FT /translation="MRRSLPALLVLPAAVLIGGMFLLPVLRILAISFTEPHAGLGNYAA FT LFTEPLYLKIMATTARICAWTTLIALGLGYVLAYVMANSSPRMRSWMIIGLLVPFWLSV FT LVRAFAWVLLLAREGPVNATLMALGVIDSPLALLRNETGVLIGMVHYMIPYAVLPMLTN FT MLGIDRSLMAAARALGAGPVATFLRVYLPLSLPGVLAAGVLVFIFSLGFFITPALLGGG FT KTVMVAQYIEFGISETMNWGISTAFAATLLVAVIMSLVLVSRVVRVPSLFGAP" FT misc_feature 11937..12026 FT /note="Signal peptide predicted for BPP2302 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.973) with cleavage site FT probability 0.689 between residues 30 and 31" FT misc_feature join(11955..12023,12108..12176,12213..12281,12369..12437, FT 12528..12596,12654..12722) FT /note="6 probable transmembrane helices predicted for FT BPP2302 by TMHMM2.0 at aa 7-29, 58-80, 93-115, 145-167, FT 198-220 and 240-262" FT misc_feature 12423..12632 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 4e-08" FT misc_feature 12585..12608 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 12761..13564 FT /transl_table=11 FT /locus_tag="BPP2303" FT /product="putative ABC transporter, permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1929" FT /db_xref="GOA:Q7W844" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W844" FT /protein_id="CAE37600.1" FT /translation="MSVRPSWWFAAAAVVAALVLAFLFLPALVVIPVSFTDRSYLSFPA FT ESWSWQHYRQLVDSPVWRGSLLQSVAVSAVSTLAATLLGAAAAIGAWRLGARLGALVRL FT LALLPLIVPTIVGALAYYRLYIDLGLLDTFTGVVIAHVVAAMPFVFVSVGSALANFDPR FT LEQAARSMGARPWQVLWRITLPGVRSGLVSGAIFAFIVSWDELVVLLFVTTRNVYLLPR FT VMWDGINENVDPTIAAVATLMIVITFICLCAERLLVHHRQKQELS" FT misc_feature 12761..12847 FT /note="Signal peptide predicted for BPP2303 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.857 between residues 29 and 30" FT misc_feature join(12779..12847,12968..13036,13055..13123,13166..13234, FT 13295..13363,13466..13534) FT /note="6 probable transmembrane helices predicted for FT BPP2303 by TMHMM2.0 at aa 7-29, 70-92, 99-121, 136-158, FT 179-201 and 236-258" FT misc_feature 13226..13447 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 6.2e-13" FT misc_feature 13229..13315 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 13561..14652 FT /transl_table=11 FT /locus_tag="BPP2304" FT /product="probable ATP-binding component of ABC FT transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1930" FT /db_xref="GOA:Q7W843" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W843" FT /protein_id="CAE37601.1" FT /translation="MNAAATTPTPLLRVRALNKRFGAFQALRGVDFELGAGEFLTLLGP FT SGSGKTTTLMSIAGFVAPTSGDILYQGASITGQAPEARGFGMVFQGYALFPHMTVEQNV FT RFPLAIRGVGREQARRRAQQALEQVQLGSYGARYPRQLSGGQQQRVALARALVYDPRIL FT LLDEPLSALDKKLRADLQWELRKLNKESGASFLYVTHDQEEALSMSDRIAIFNEGGIAQ FT IGSPTELYERPANLFVAGFLGRSNVLAGKVRQAGADGVAVEYEGGVLEVPKPRRQYAPG FT EAVSLVVRPHQMRLDAAGRQGLAAKVEAISYAGNLMNYLLRTPRGTALFAEAVAGAGAA FT LRQDDLVSVGLDAAAVSLLEAAD" FT misc_feature 13669..14214 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.2e-64" FT misc_feature 13690..13713 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 13984..14028 FT /note="PS00211 ABC transporters family signature." FT tRNA 14726..14802 FT /note="tRNA Arg anticodon ACG, Cove score 86.25" FT CDS complement(15029..16057) FT /transl_table=11 FT /locus_tag="BPP2305" FT /product="probable NADH-dependent flavin oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1931" FT /db_xref="GOA:Q7W842" FT /db_xref="HSSP:1ICP" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q7W842" FT /protein_id="CAE37602.1" FT /translation="MNLLSPIDIAGIALRNRIAVAPMSRTQADVHGHPAAETAAYYARY FT ARHGAGLVITEALYTAGPAARAYFNQPGLASEAQAEHWRATVRAVHQEGGRVIAQLQHA FT GKLAEPGLHARPLGPVDGAAQGLSWQTQQPNAPAHAATAEEIERIIEGFALSARLAHYA FT GFDGVEIHGARGYLVNDFLSAYNVRDDEWGADRARIAEAVLRAVRQSCPLPIGFNYSIY FT KMDEYRYQPPGSGAEIAALLARLCQAGADILHISSRRVLKPEPWGGLLAQLARAAAPKA FT LMVNGGLATLQDCETALAATQADLVSLARPFLANPDWLARSLAGEPLRAYEPGMEQRPL FT LD" FT misc_feature complement(15071..16054) FT /note="HMMPfam hit to PF00724, NADH:flavin oxidoreductase / FT NADH oxidase family, score 1.6e-41" FT CDS complement(16054..16920) FT /transl_table=11 FT /locus_tag="BPP2306" FT /product="probable transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1932" FT /db_xref="GOA:Q7W841" FT /db_xref="InterPro:IPR005471" FT /db_xref="UniProtKB/TrEMBL:Q7W841" FT /protein_id="CAE37603.1" FT /translation="MAESRQEDYFINGLAKGLAIIQAFNNEARALTLAEAAYRTGLSRA FT AARRVLLTLVELGFAARCGDRHFALTPRVLSLGYAYLSSMPLWRFAEPVLEALVEELRQ FT TCSIAALDGTELVYVARIPLHRTLNQGLSIGSRIPLYCHSAGRVLLSGFTPEQLESYLQ FT TAELRPLTARTVTERTALRDIIQEVRRRGYAWSCGEVEDHTTGLSVPIFQHGRLIAALN FT VSRMHSADDESLWCGSYLQSLRRAAGRLTAALSVDHNPRIVRMERSPDCPATLPATGGE FT PCLPAKP" FT misc_feature complement(16162..16719) FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator, score 8e-41" FT CDS complement(16929..19049) FT /transl_table=11 FT /locus_tag="BPP2307" FT /product="putative pimeloyl-CoA synthetase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1933" FT /db_xref="GOA:Q7W840" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W840" FT /protein_id="CAE37604.1" FT /translation="MSTLADNAPRMAGAGDWIDAALAPRSVAIVGASDNPEKIGGRPIK FT YMLQHGYQGRILPINPGRDRVQGIAAWHSLDAVDVPIDMLLVCVAGEAAVQAVRDGARL FT GVRVCVVISSGFAETGEPGRQAQEHMKAAAAAAGMRLLGPNTQGLANFSNGALATFATL FT LGEVAPADGPVAVISQSGAMSMVPYAHLRAEGIGVRYSVATGNECDLNVADFTEAVLRD FT PEVKLILLYMESLPAPATLARAAALARSRQAPVLALKAGVSPQGLQAAQSHTGAIATED FT KALDAWFRQHGILRVADARSLVMGAQLLLRCGHLPGNRLAILSNSGAACVTGADAAERH FT GLQVPPLPAETRARIDAVLPGFASSLNPIDLTAALLSNNHLFGQVLPILASARACDALF FT ITLPMSGKGYDTDQFARDAAAFTAETGLPVVVSCPLAASRRIFAQAGQATFEHDEDALA FT ALGQLARLSGLRETALRLARPAPHAPAAPVPRTAGLLSEADSLEQIEAIGIRTAPWRLC FT LDADSMGSALGSLPGPWAVKACSAQIPHKSEYGLVHLGIADEQRARALFPMLRQEVLGM FT GKSFDGVIVASMVKPRREFMIGARWDSQFGCIVIVGDGGKYVEAMPDVATLVYPFDQAH FT AEQCLRKLRVAALFDGVRGENPLPVQELAHAATRLGAWLHAQQGAVASVDINPLIAGPD FT GRLYAADALVEI" FT misc_feature complement(18663..18989) FT /note="HMMPfam hit to PF02629, CoA binding domain, score FT 5.2e-07" FT CDS complement(19050..20075) FT /transl_table=11 FT /locus_tag="BPP2308" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1934" FT /db_xref="GOA:Q7W839" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W839" FT /protein_id="CAE37605.1" FT /translation="MSRRRSRGMSACHTEAVQQRRNTMKWIASMALALCAGGAFAADYP FT TRPITLIVPYGPGGTNDILARAIANKISPTLGQTVVVNDRPGAGGNIGAQQVATAEPDG FT YTLLLASSGVFAVNKWLYRSLRYDPAQAFAPVILAGSVPNVLIVDTEVPAKTLPELVKY FT AKSAQPSLNYASMGTGTSGHLCAELFKAQADIEAEHIAYPGSAAALTALLGHQVQLMCD FT NLPTALPQIKAGRARALAVSSAERAPLLPDTPTVAESGFPGFDATAWFGIAAPAGTPAP FT IVERLNKEINAALQAPDVARILGEQGVSFRPNTPAQFSQFISAESAKWRDVIERTGSRA FT D" FT misc_feature complement(19062..19886) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 5.2e-124" FT misc_feature complement(19941..19997) FT /note="1 probable transmembrane helix predicted for BPP2308 FT by TMHMM2.0 at aa 26-45" FT misc_feature complement(19953..20075) FT /note="Signal peptide predicted for BPP2308 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 1.000 between residues 41 and 42" FT CDS complement(20075..20467) FT /transl_table=11 FT /locus_tag="BPP2309" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1935" FT /db_xref="InterPro:IPR006175" FT /db_xref="UniProtKB/TrEMBL:Q7W838" FT /protein_id="CAE37606.1" FT /translation="MHSSLQAVLPPGANPNSTFSPAVRAGGFLYISGMTALNEQREIVG FT VGDIAAQARYIYQKIAAVLAQAGGNLSQVVETVDYVTTFDGYGQTADVRREVFGAGPFP FT AATGVLVSGLVRPAALIEIRAVAYLG" FT misc_feature complement(20081..20437) FT /note="HMMPfam hit to PF01042, YjgF family, score 2.7e-20" FT CDS complement(20471..20959) FT /transl_table=11 FT /locus_tag="BPP2310" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1936" FT /db_xref="GOA:Q7W837" FT /db_xref="HSSP:1IQ6" FT /db_xref="InterPro:IPR002539" FT /db_xref="UniProtKB/TrEMBL:Q7W837" FT /protein_id="CAE37607.1" FT /translation="MQPPSHAPRQLAAADLAVGQVVAQREIRLDAQAFAQFAALTGDAH FT PIHYDAGYVQRQGLRAPIAHGLLLVAISALGATPLSAQLHDAMVAMVGVEAVFMRPVYV FT DETVQCVYRVAQIEHVAKGRSKTTIAVSIHTTDAPPDAARQAHCVVHLTFLLKTHLQG" FT misc_feature complement(20546..20917) FT /note="HMMPfam hit to PF01575, MaoC like domain, score FT 3.8e-05" FT CDS complement(20973..21308) FT /transl_table=11 FT /locus_tag="BPP2311" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1937" FT /db_xref="GOA:Q7W836" FT /db_xref="InterPro:IPR002539" FT /db_xref="UniProtKB/TrEMBL:Q7W836" FT /protein_id="CAE37608.1" FT /translation="MQRTLDITQAMIDGYGRINGDNDIIHYDHDYAVQRGFRGTLLHGP FT HMTALAADLGARRYASDWLYRGKLHTKWIGPVCPGDTFVATLNEQGEIEAVSGGKTVMV FT GSASLAD" FT CDS complement(21315..21764) FT /transl_table=11 FT /locus_tag="BPP2312" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1938" FT /db_xref="UniProtKB/TrEMBL:Q7W835" FT /protein_id="CAE37609.1" FT /translation="MTRPSDIKPREGDTPGTPYAAFVEGAALGPVSFDITPAIVQEYFE FT ASQADPALYRVDGRQAAAPNVILPYMTVPVYQTYPPIQGIVMAELEMSWHRPIWADETT FT RVTATGTILRKFEKRGRRYVQWEGRFRGADGQPIATLLNTFHVPE" FT CDS 21972..22271 FT /transl_table=11 FT /locus_tag="BPP2313" FT /product="putative ArsR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1939" FT /db_xref="GOA:Q7W834" FT /db_xref="InterPro:IPR001845" FT /db_xref="UniProtKB/TrEMBL:Q7W834" FT /protein_id="CAE37610.1" FT /translation="MAINTEDILKALAHPARRNILAWLKEPQRHFPQQEHPLELGVCAG FT QFERCGLSQSTVSTHLAILQRAGLIQSRRVGQWVFYQRNEACIAEFLQTMQAEL" FT misc_feature 21996..22265 FT /note="HMMPfam hit to PF01022, Bacterial regulatory FT protein, arsR family, score 4e-09" FT CDS 22313..23425 FT /transl_table=11 FT /gene="nemA" FT /locus_tag="BPP2314" FT /product="N-ethylmaleimide reductase" FT /EC_number="1.-.-.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP1940" FT /db_xref="GOA:Q7W833" FT /db_xref="HSSP:1GWJ" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q7W833" FT /protein_id="CAE37611.1" FT /translation="MSTLFQPLNAGKLRLANRIVMAPLTRNRSPNAVPPPLTATYYAQR FT ASAGLIITEATAISHQGQGYADVPGLYAPEQLAGWRRVTDAVHAAGGTIVVQLWHVGRI FT SHTTLQPGQGAPVAPSAIRAQARTYLVDAQGKGQFADTSEPRALALDELPGIVEDYRRA FT ARAAIDHGFDGVELHAANGYLLDQFLRSGSNHRDDAYGGSIENRARLLLQALDAVCAEV FT GADRVGIRLSPVTPANDAHDDQPQPLFEYVLRELARRGLAYVHVIEGATGGDRAYQQGP FT APFDYAALKAAYRAAGGAGAWMVNNGYDASLAEQKLSSGQADLVAFGKPFIANPDLVAR FT LRQGAALNEGDRDTFYGGGERGYTDYPALA" FT misc_feature 22319..23356 FT /note="HMMPfam hit to PF00724, NADH:flavin oxidoreductase / FT NADH oxidase family, score 4.9e-78" FT CDS complement(23430..24080) FT /transl_table=11 FT /locus_tag="BPP2315" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1941" FT /db_xref="UniProtKB/TrEMBL:Q7W832" FT /protein_id="CAE37612.1" FT /translation="MKALIIDISASPLREYVHQHGVADGLLYGCWYRIVRPLLVILTWV FT AFSLYIHHSLVTVGGTAAQIAELLVYITVVATMAAALTAWMIVCRFHGWIRARDNEEVG FT VGLDPEYALPPRWPLPEGANRLLVDHDEAGAIVQVSAWYVPAAIEPVVAAAMAPVVAPA FT VMPDAAPLSEPAPLAAALPDEADEPAAWSGPPMQRQPDGRIEPSLHDGRALTL" FT misc_feature complement(join(23817..23882,23913..23978)) FT /note="2 probable transmembrane helices predicted for FT BPP2315 by TMHMM2.0 at aa 34-56 and 66-88" FT CDS complement(24061..25320) FT /transl_table=11 FT /gene="hmsR" FT /locus_tag="BPP2316" FT /product="putative glycosyl transferase component of hemin FT storage system" FT /note="ortholog of Bordetella pertussis (BX470248) BP1942" FT /db_xref="GOA:Q7W831" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q7W831" FT /protein_id="CAE37613.1" FT /translation="MNDSVKSVLSSFVFYYPFFMSYFWIVGGLLHFFLFEQGRKHRATL FT LPRVPRVAIVVPCYNEGENVAEVIAHLDRMHYPNYRIIAVNDGSRDNTGALLNELAEQY FT PRLLVVHQSRNEGKAIGLNTAAQLSDAEFLLCIDGDSLPHPDSITYMLTHFLHAGHVGA FT VTGNPRIRNRSTVLGRMQVGEFSSIVGLIKRTQQLYGKLMTVSGVITMFRKQALHQVGY FT WSPDMQTEDIDISWKLQLAGWTLRYEPRALTWILMPETFRGLFKQRYRWARGGIETALK FT YAPRMLNPRQILMWPIFLEFSLSVLWAYAMLFLICMAVLGQFVALQPAWQFEIFPRWHG FT TLLFLTCLAQLFAGCIVDRAYDYRIFRYFADAVWYPIAFWIIGMITTVFALPRVLFRRA FT QSRARWVSPDRGIKHESVDH" FT misc_feature complement(join(24139..24204,24250..24306,24343..24408, FT 25219..25284)) FT /note="4 probable transmembrane helices predicted for FT BPP2316 by TMHMM2.0 at aa 12-34, 304-326, 338-357 and FT 372-394" FT misc_feature complement(24658..25164) FT /note="HMMPfam hit to PF00535, Glycosyl transferase, score FT 1.6e-31" FT CDS complement(25324..27429) FT /transl_table=11 FT /gene="hmsF" FT /locus_tag="BPP2317" FT /product="putative hemin storage protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1943" FT /db_xref="GOA:Q7W830" FT /db_xref="InterPro:IPR002509" FT /db_xref="UniProtKB/TrEMBL:Q7W830" FT /protein_id="CAE37614.1" FT /translation="MTAMHRTLLKWFACCALGLLMLPARAYKVDMLPPPDPDDGLTFRV FT LCMHDVRDNLRASFADMPDQFAIETRTLTDLFEWIRVKGFNPISMQQIIDSRAGVRPLP FT PRPILLTFDDGYASTYTKVFPLLKKFNYPAVVAVVTSWTDAPAGTKIRLSPKIEVPHDF FT FMTWAQLREMAQSGLVELASHSHNLHRGVLANPQGNEQPAASSRQYLPASGRYENDAEY FT RARVRQDLKTSADLIREHTGVTIRSIVWPYGAHNRDTDQVAAEVGLNIGLTLQPGPNTP FT DVALTQIRRSLVDYEVNVATVARAMREPVSYHGQVRPIERIVQVDLDYIYDPDPEQQNR FT NLGQLIDRMKDLAPSAVYLQAFADPKGDGDITEVYFPNRHLPMRADLFNRVAWQLKTRA FT GVMVYAWLPVLTFSVPPGNPAYGKVVQSTTRKPGERGLGSPTRLSPFHPDAHRVISEIY FT EDLAKAAHFDGLLFHDDAVLDNTEDSSPEALATYQGWGLPPDIAAIRADPKLAQQWSKG FT KIRYLIDFTMHLRHIVSGYQNDRDMVVARNLYAQPVLDPVSEAWYGQSLPEFLKSYDFV FT ALMAMPNMEGAARPEQWMRQLVAAVARQKGLDRTIFELQARDWRVGKPIDTEILRRQMV FT QLRSLGAINYGYYPDDFIANHPDAEALRDVMSLKSTLEKRRLTKAQELSRQTTLYGSAS FT QAEPTQR" FT misc_feature complement(27352..27429) FT /note="Signal peptide predicted for BPP2317 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.809 between residues 26 and 27" FT CDS complement(27435..29420) FT /transl_table=11 FT /gene="hmsH" FT /locus_tag="BPP2318" FT /product="putative hemin storage protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1944" FT /db_xref="GOA:Q7W829" FT /db_xref="InterPro:IPR013026" FT /db_xref="UniProtKB/TrEMBL:Q7W829" FT /protein_id="CAE37615.1" FT /translation="MNNDQTRRTRPASVRGLRRTRLLVAGLAFVGAAAAAAPSVRDQVQ FT EASRSGAANLALDLATEHRALFTPLEYAQLQHAAIAQRLRWSRAETWNLTGPERFATLD FT AALADGWQLLDSLPLAPEYGSLRTAVISDMIYGLGLRGRYADAIKLYEGLRATNTPVHP FT YVLVSAGNAYAYEERYDEAIACYEEALAKAGPGDIDRVPTQESLFFAYMDRGRYEDAEQ FT LLQRIEKTSPQYVENAPVAERPNEDYATAQRLRAQYLMYSGETEAGTLAIDALQHDAPF FT SSGLRNAAASARLGDARPREAKAAFTTALAERPDDIQAMTGLARASMALREYPEAEAIV FT TTLSERFPESSSVRNLQRDYEMYQSPLLTMDFGGDIGHGGDNSSNDNSTIANREWSLNT FT MLYTSPISHNYRLFFHQFTGYADLGDGHKSRVRNGAGLEYRRGSIEASTELHQSTGPSG FT RFGASANVAWLPSDGWRLAANFDSDSNDLPWKAYRAGIHGWSSGVSARYQPTERTYYDV FT AYQLQRYSDSNTRQTIGATWFQNLWTVPRHSVSTWTSVAYSNNSKTDTEYFSPDHDLTA FT QVTAMYEWRPWRDGQYAFRQRVYATGGVYNQAEHGNSALWQLRLEQVWDLPRQTSITYG FT VGYGRHSYDGDPENRTLFYLTLNIPF" FT misc_feature complement(29313..29420) FT /note="Signal peptide predicted for BPP2318 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.692 between residues 36 and 37" FT CDS 29629..29865 FT /transl_table=11 FT /locus_tag="BPP2319" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1945" FT /db_xref="UniProtKB/TrEMBL:Q7W828" FT /protein_id="CAE37616.1" FT /translation="MRSAAKWWGPAATWTLAALLVLLVGHGVVPEAARVSDAPLLHAMA FT GHAYLLNWAAGLMALIGWGDSLVLYRRTRRRAV" FT misc_feature join(29647..29715,29773..29841) FT /note="2 probable transmembrane helices predicted for FT BPP2319 by TMHMM2.0 at aa 7-29 and 49-71" FT tRNA 29917..29993 FT /note="tRNA Arg anticodon ACG, Cove score 86.25" FT CDS 30212..30697 FT /transl_table=11 FT /locus_tag="BPP2320" FT /product="MarR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1946" FT /db_xref="GOA:Q7W827" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q7W827" FT /protein_id="CAE37617.1" FT /translation="MPASQDKLDVPPGPYHFSEQVGYLLRRAYQRHVAIFQQTIPDSKL FT TAAQFVVLCALRDQGACSLVDVVKATAIDQATVRGVIERLKARKLLAVSHDPADRRKVL FT VTLTPDGRALVEEMVPFAEQITQSTFGGLNPAERVAIVYLLRKMSDADDLVGRQSDS" FT misc_feature 30344..30655 FT /note="HMMPfam hit to PF01047, MarR family, score 6.5e-17" FT CDS 31012..32220 FT /transl_table=11 FT /locus_tag="BPP2321" FT /product="branched-chain amino acid-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1948" FT /db_xref="GOA:Q7W826" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q7W826" FT /protein_id="CAE37618.1" FT /translation="MNGRNRYARLLGATCLTLLGASAWAQDTIKIGEINSYKSQPAFLE FT PYKKGMQLALDEVNDAGGIAGKKLELVIRDDNANPGEAVRAAEELISRERVDMLTGSFL FT SHIGLALTDFAKQKKVFFLASEPLTDKIVWQDGNRYTYRLRTSTYMQVAMLVPEALKLK FT KKRWAIVYPNYEYGQSAVATFKTLMKAGQPDIEFVSEQAAPLGKVDAGSVVQALADSKP FT DAIFNVLFAADVTKFVREGTTRGLFKERPVVSVLTGEPEYLDTFRDETPAGWIVTGYPW FT QFIETPEHQAFLKAYQAKFKDYPRLGSVVGYSAIKSLAEGIKRAGGKTDTESMIKAFAG FT LKLTIPFGPIEYRTLDNQSTMGAYVGKLASRDGKGVMVDFRYVDGAAAQPSDEEVRKLR FT KAD" FT misc_feature 31012..31086 FT /note="Signal peptide predicted for BPP2321 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 1.000 between residues 25 and 26" FT CDS 32378..34261 FT /transl_table=11 FT /locus_tag="BPP2322" FT /product="putative permease component of branched-chain FT amino acid transport system" FT /note="ortholog of Bordetella pertussis (BX470248) BP1949" FT /db_xref="GOA:Q7W825" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W825" FT /protein_id="CAE37619.1" FT /translation="MAAGLSLIFGVTRIVNFAHGSLYMLGVYVAYSIVERVGGTALGFW FT FGLVAASLAVGVVGAAIEVVLLRRIYRAPELFQLLATFALVLVINDAALWIWGAEDLLG FT RRAPGLTGAVDLLGRQYPVYNLVLIVIGPVVLGLLWLLLMRTRWGTLVRAATQDREMLG FT ALGVNQAWLFTGVFALGAMLAGLGGALQLPREPASLSLDLRTIGDAFVIVVVGGMGSIP FT GAYVAALIIAEIKALCIGLGTVTLLGFSVSFSKLTLVVEFAFMALVLVFRPWGLFGRPQ FT GASRNSAPIEAPLRPAAPRLRILWGVLLAALATLPLLAQWLPYAVVLTQDILIAALFAV FT SLHFMMGPGGMHSFGHAAYFGLGAYGAALLLKAASLPMEAALAFAPLVAALGALIFGWF FT CVRLSGVYLAMLTLAFSQIVWSVVFQWDDFTGGSNGMIGVWPAEWLSGTAYYYLALAVV FT AAAVLGLRRVLFSPFGYAMRAGRDSSLRADAIGIDVKRVQWAAFVVAGAFGGLAGALYA FT FSKGSISPDTMAVSKSVDGLVMVLLGGIQTLIGPVVGATAFNVLQDYIMRATEYWRALF FT GGVILLLVLVFPQGIAGFCRQAGQWWSARAGKDRPPRKGGAFIGGPREKQA" FT misc_feature 32378..33220 FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 8.6e-10" FT misc_feature join(32396..32464,32507..32575,32612..32671,32738..32806, FT 32867..32935,33002..33070,33089..33157,33284..33352, FT 33371..33439,33515..33574,33587..33655,33719..33787, FT 33866..33934,33992..34060,34097..34156) FT /note="15 probable transmembrane helices predicted for FT BPP2322 by TMHMM2.0 at aa 7-29, 44-66, 79-98, 121-143, FT 164-186, 209-231, 238-260, 303-325, 332-354, 380-399, FT 404-426, 448-470, 497-519, 539-561 and 574-593" FT misc_feature 33326..34165 FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 3.8e-12" FT CDS 34258..35034 FT /transl_table=11 FT /locus_tag="BPP2323" FT /product="putative ATP-binding component of branched-chain FT amino acid ABC transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1950" FT /db_xref="GOA:Q7W824" FT /db_xref="HSSP:1G6H" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W824" FT /protein_id="CAE37620.1" FT /translation="MSLLQVRNLSKAFGGVRAVDDISFDLAAGELLALIGPNGAGKSTT FT FNMVGGQLPATTGSVRLDGHELVGMRPRDIWRLGVGRTFQIAATFASLTVVENVQMALL FT SHHRRIFSFGSLAARQYREPALALLEQVGMRDQAERPCSELAYGDVKRVELAMGLANDP FT KLLLMDEPTAGMAPQERNALMALTKRLVVDRGMAVLFTEHSMDVVFAYADRMIVLARGR FT LIAEGRAQEIRNHPKVQEVYFGTGKTFEKHSAGAAA" FT misc_feature 34342..34920 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.4e-52" FT misc_feature 34363..34386 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 35031..35801 FT /transl_table=11 FT /locus_tag="BPP2324" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1951" FT /db_xref="GOA:Q7W823" FT /db_xref="HSSP:1JI0" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W823" FT /protein_id="CAE37621.1" FT /translation="MSTVAEPTRAAAATQAPALLRVAGLNAWYGAVHILFDVDLEVRRG FT EVVALMGRNGAGKSTTFKAVMGLLAKRRGAVEFMGRDIAGLQPFEIARLGLGFVPEDRR FT VFTDLTVTENLEVGRQPARRWPDGSAAPNWQPGALYELFPNLGAMQDRPGGQMSGGEQQ FT MLTVARTLMGNPFLVLLDEPSEGVAPVIVEQMAGMILALKAQGASILLSEQNVHFAELV FT SDRVYVLEKGQIRYSGSMAELADNEEVRRAYLTV" FT misc_feature 35163..35726 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.8e-40" FT misc_feature 35184..35207 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 35499..35543 FT /note="PS00211 ABC transporters family signature." FT CDS complement(join(35955..38180,38179..38760)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2325" FT /product="putative cytochrome (Pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1952" FT /db_xref="PSEUDO:CAE37622.1" FT misc_feature complement(36021..36272) FT /note="HMMPfam hit to PF00034, Cytochrome c, score 0.22" FT misc_feature complement(36231..36248) FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature complement(36627..36644) FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature complement(36813..37124) FT /note="HMMPfam hit to PF00034, Cytochrome c, score 0.0036" FT misc_feature complement(37065..37082) FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS complement(38791..39312) FT /transl_table=11 FT /locus_tag="BPP2326" FT /product="probable oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1953" FT /db_xref="GOA:Q7W822" FT /db_xref="HSSP:1DGJ" FT /db_xref="InterPro:IPR001041" FT /db_xref="UniProtKB/TrEMBL:Q7W822" FT /protein_id="CAE37623.1" FT /translation="MPRRIEVCRIAMLAATRDFTLEVNASRHTVTADPDTPLLYILRND FT LCLNGPKFGCGLGECGACAVLIDGVAARACTIPVRGAAGHAITTLEGLGTPQAPGPVQQ FT AFIDEQAAQCGYCLNGMIIATQALLLRNAAPTDEDIRRELQYHLCRCGTHIEIMAAVRR FT AARLWAARQA" FT misc_feature complement(38824..39048) FT /note="HMMPfam hit to PF01799, [2Fe-2S] binding domain, FT score 9e-23" FT misc_feature complement(39070..39252) FT /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster FT binding domain, score 6.4e-07" FT misc_feature complement(39124..39150) FT /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding FT region signature." FT misc_feature complement(39235..39312) FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT CDS complement(39389..40540) FT /transl_table=11 FT /locus_tag="BPP2327" FT /product="putative monooxygenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1954" FT /db_xref="GOA:Q7W821" FT /db_xref="InterPro:IPR003042" FT /db_xref="UniProtKB/TrEMBL:Q7W821" FT /protein_id="CAE37624.1" FT /translation="MQGKPRIAVIGAGLGGTAGAALMARAGFNVRLYEQAPAFSRLGAG FT IHLGPNVMKIIRRIGIEDELNRQGSHPDYWYSRDWQSGAELARIPLGDYAVSHYGATYL FT TVHRGDFHALMTAALPAGLLQFNKRLTRVDEDDDVVRLHFADGSVEEAEIVIGADGVNS FT RLREHLLGAELPKYTGYVAHRAVFPTPLDSGSLPFDMCVKWWSDDRHMMVYFVTGKRDE FT IYYVTGVPEQQWDMGKSWVPSSKAEMRAAFAGWHPTVQALIEATPEVSKWPLLERDPLP FT LWSRGRIVLLGDACHPMKPHMAQGAAMAIEDAAMLTRIFEQTGLQDHAAAFRLYEDNRA FT ERASRVQRVSHDNTWLRTNENPDWCFGYDVYAEPLVEGRRAAA" FT misc_feature complement(39488..40090) FT /note="HMMPfam hit to PF01360, Monooxygenase, score FT 5.8e-33" FT misc_feature complement(40454..40519) FT /note="1 probable transmembrane helix predicted for BPP2327 FT by TMHMM2.0 at aa 7-29" FT misc_feature complement(40472..40540) FT /note="Signal peptide predicted for BPP2327 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.973) with cleavage site FT probability 0.516 between residues 23 and 24" FT CDS 40841..41593 FT /pseudo FT /transl_table=11 FT /gene="maiA" FT /locus_tag="BPP2328" FT /product="maleate cis-trans isomerase (Pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1955" FT CDS 41613..42434 FT /transl_table=11 FT /locus_tag="BPP2329" FT /product="probable alpha/beta hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1956" FT /db_xref="GOA:Q7TTM5" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7TTM5" FT /protein_id="CAE37626.1" FT /translation="MSNFRYGGNVQANGIRQHYLRYGGERAGRDPVIIVPGITSPAVTW FT GFVGERFGEQFDTYILDVRGRGLSQSGPQLDYGLDAQAEDLLAFARALGLSRYSVVGHS FT MGARIGIRAARTGEAGLARLAMVDPPVSGPGRRAYPSKLPWYVDSMAQARQGMTGEQMK FT AYCPSWTAEQLQLRAEWLHTCEERAVIASFEGFHEDDVHADLPRVRAARLLMTAERGEV FT VLDADVAEIEALAPGTAHVRVAGAGHMIPWDNEEGFYAAFGDFLGARLRAG" FT misc_feature 41778..42410 FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold, FT score 2e-09" FT CDS 42462..43493 FT /transl_table=11 FT /locus_tag="BPP2330" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1957" FT /db_xref="UniProtKB/TrEMBL:Q7TT89" FT /protein_id="CAE37627.1" FT /translation="MPVSDYEMIRAWTQVLSLSRLQAGQTVTVLTSAATHPQTLGTALV FT AAQSLGAVVNRLDLPPVNGEKALSRDALAYLGTTPLTGNKAAIAMLKASDLVLDLMTLL FT FSPEQHEILQGGTKILLAVEPPEVLARLVPTEGDRQRVKAAAERIAGAREMTVESEAGT FT RLRCGLGEFPAISEYGYVDEPGRWDHWPSGFALTWPDEGSANGTIVIDRGDILLPQKSY FT VSEPIVLTVENGYATRIEGGLDAELLREYVATFKDPQAYAISHIGWGLQPRASWTTLGL FT YDREATIGMDARAYEGNFLFSLGPNNEAGGSRTTACHIDIPLRRCTVRLDGREVVREGK FT VLD" FT CDS 43509..44126 FT /transl_table=11 FT /locus_tag="BPP2331" FT /product="putative isochorismatase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1958" FT /db_xref="GOA:Q7TTC8" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:Q7TTC8" FT /protein_id="CAE37628.1" FT /translation="MGNDLGSYERQGFGAALLLKAPYGLLIVDFVNGFADPAQFGGGNI FT AAAIETTRTVLAAARERGWAVAHSRIVYADDDADGNIFSIKVPGMLTLKEHAPASAIVP FT QLAPQAGEYVVRKSTPSAFYGTMLAAWLAQRGVQTLLVAGATTSGCVRASVVDAMSAGF FT RPLVLSDCVGDRALGPHEANLFDMRQKYAAVMTHDEALAKTK" FT misc_feature 43560..44114 FT /note="HMMPfam hit to PF00857, Isochorismatase family, FT score 1e-07" FT CDS 44123..46534 FT /transl_table=11 FT /locus_tag="BPP2332" FT /product="probable aldehyde dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1960" FT /db_xref="GOA:Q7W820" FT /db_xref="InterPro:IPR008274" FT /db_xref="UniProtKB/TrEMBL:Q7W820" FT /protein_id="CAE37629.1" FT /translation="MTHPGACPRTGDRHLPNPGCLPFPWGQTPAESWEPVLPVGTGTCR FT ILLPAGTDAPSMRTVMQTPRSQREALLRAADALLVTRAPTAGARPAPGQPGAASDYVPA FT TPDVFIAVRADGRVQAFNGHVDLGTGVRTALAQIVAEELDVAFERVEMVLGHTEAAPNQ FT GPTIASATIQITAVPLRKAAAQARAWLLARAADALGMPADMLRVDDGVVRAGNGRATDY FT WTLLAGGGATLALADAVALKPSAQYRVVGRAVPRVDIPAKATGQLTYVHDMRLPGMLHG FT RVVRPPYPGRDVGGFVGHSLRDVDRASIAHLPGIVDVVVLGDFVGVVAEREEQAIKAAR FT QLKVHWAAPPPAPDLSDLARALRDQPATPRELVPQGDVDAALAHPDALRCTYVWPYQMH FT GSIGPSCGLADYRPDGLTVWSGTQNPHMLRIDLDRLLGLGESRIEIVRMEAAGCYGRNC FT ADDVCADAALLSRAVGRPVRVQLSREQEHAWEPKGAAQLMEVRGAVDAQGGLAAYDFAT FT RYPSNDAPLLALLLTGTLAAGPRTLQMGDRTAVPPYRYDRLRVVCHDTAAIMRAAWLRG FT VSALPNSFAHDCFIDELAERAQADPLAFRLRHLDDPRAIDLLREVASRAGWREGRRGSR FT GQADARHRLRGRGLAYARYVHSKFPGFGAAWAAWVVDLAVDARSGAITVERVVVGQDTG FT MTVNPDGVRHQLHGNVIQSLSRALKEQVSFNQAGVSSMEWGAYPILGFTEVPPIEVVLM FT PRQDQPPMGAGESASVPGAAALANALFDATGRRFREPPFTPERVRAALAG" FT misc_feature 44912..45178 FT /note="HMMPfam hit to PF01315, Aldehyde oxidase and FT xanthine dehydrogenase, a/b hammerhead domain, score FT 0.00059" FT misc_feature 45188..46360 FT /note="HMMPfam hit to PF02738, Aldehyde oxidase and FT xanthine dehydrogenase, molybdopterin binding domain, score FT 2.4e-07" FT CDS 46552..47991 FT /transl_table=11 FT /locus_tag="BPP2333" FT /product="putative flavocytochrome" FT /note="ortholog of Bordetella pertussis (BX470248) BP1961" FT /db_xref="GOA:Q7W819" FT /db_xref="InterPro:IPR017927" FT /db_xref="UniProtKB/TrEMBL:Q7W819" FT /protein_id="CAE37630.1" FT /translation="MRQIKAGGERPMHNGPGATGIFRKRYRARSGDAMRRLRTIFIPLV FT AALSVLWLSQNPPGAWGEGFWVMRKPLIYYTGILALGMMSLGVILAARPARFEGALGGL FT DKFYRLHKWLGLGGVALALTHWLLKIVPPWMAGQGWTVRPPRVPAPAGQAALYDPFQAW FT HGVAKSLGEWGLYALLLLAALALYKRFPYRHFFRTHRLMPALYLVFVFHAVVLMAPAYW FT RGPIGPVMAVVMAAGGAGALLSLLGLIGRPRQAAGRIARLERFADNAVMQVDVQLETRW FT PGHRAGQFAFVTFDRAEGAHPFTISSAWRDDGLLRFSIKGLGDYTRSLPARLRVGDGVT FT VEGPYGRFDFCANGRPQILVAGGIGITPFLARLQDMAAARSDGAPAHEVDLVYSTNAPD FT PDFIGELRALAERARVGLHVLVTQRDGKLSAERLVDMLPRAVQSEVWFCGPAGFGQALR FT EGLAARGMPPACFHQELFEMR" FT misc_feature join(46651..46710,46768..46827,46888..46956,47059..47112, FT 47149..47217,47227..47295) FT /note="6 probable transmembrane helices predicted for FT BPP2333 by TMHMM2.0 at aa 34-53, 73-92, 113-135, 170-187, FT 200-222 and 226-248" FT misc_feature 47317..47601 FT /note="HMMPfam hit to PF00970, Oxidoreductase FAD-binding FT domain, score 0.00023" FT misc_feature 47611..47928 FT /note="HMMPfam hit to PF00175, Oxidoreductase NAD-binding FT domain, score 0.0028" FT CDS complement(48002..50110) FT /transl_table=11 FT /gene="bfrI" FT /locus_tag="BPP2334" FT /product="putative ferrisiderophore receptor" FT /note="ortholog of Bordetella pertussis (BX470248) BP1962" FT /db_xref="GOA:Q7W818" FT /db_xref="HSSP:1BY5" FT /db_xref="InterPro:IPR010105" FT /db_xref="UniProtKB/TrEMBL:Q7W818" FT /protein_id="CAE37631.1" FT /translation="MDNRTPQRRRPAAPRLLHLSLAASLAAGAAQAQTATEATTLPAVQ FT VTGRGKTATGPVDGYAATRSATATKTDTPLSETPQAVTVIPREQIIDQGAQNVQDTMNY FT AAGVRPNAYGVDNRGDYVRVRGVEPVQYLDGLKQFFNYNNPRTEVYGLERVEVLRGPAS FT MLYGQGSTGGVVNLVSKQPQPEAMREIGVTVGNHNRKEIQADLTGPLTEDGTWLYRVVA FT LGRDSDTQVQYTKDDRMMVAPSLTWQPSAATSLTLQAYWQKDKSGTTQAFLPWSGTVSG FT NPNGRIPTRRFTSEPGFDRYDTEQFSVGWQFEHKFNDNWKVRQNLRHTSSKVDYSTLYP FT AVYGNPDNPFIDADQRVVNRYLYIKNPRMRSLLADQNLEGKVNWGRAEHTLLMGVDYSR FT YRETGETGSGFGAPLDLYQPVYGTLPDYAMSDVPKNKQQQIGVYLQDQIKFDRNWIVVA FT GLRHDRVANSVEGADKETDNATTKRLGLMYAADNGWSPYLSYSESFTPIAGTDNSGNRW FT VPMRGKQWEAGLKYMPQDTGYEATLAAYDLRERNRQTNDPSDPTNQVQTGKTRTRGIEL FT EFRGRVTPQMDVIANYNYTDIDPQLEGLPKHTFSLWSKYRFSVGDVHGFAAGAGVRYLN FT AFRDGSAPETGSVALFDAMLSYDTGSWRYALNVANIADKTHEVVCLRRGDCFYGQRRTV FT TLSAMYRF" FT misc_feature complement(48008..48316) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00593, TonB dependent receptor FT C-terminal region, score 1.9e-10" FT misc_feature complement(49637..49666) FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature complement(50015..50110) FT /note="Signal peptide predicted for BPP2334 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.946 between residues 32 and 33" FT CDS complement(50237..50764) FT /transl_table=11 FT /locus_tag="BPP2335" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1963" FT /db_xref="GOA:Q7W817" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q7W817" FT /protein_id="CAE37632.1" FT /translation="MSRPAACLQDMLMYRLYQAWSQSNPVFVRLCEGRYGITRREWRIL FT AAAVEHGRMTSAALAAAASLDLVRTSRTVGALCRKGWLQREHGLSDRRVVHIEATEAGL FT AHYQAVLPAVAQLNDLLAESLDPAEIDQLRDLLARIEARGRAMAAGNLIAEKADRRAGG FT TRRPRETGPHPR" FT misc_feature complement(50345..50656) FT /note="HMMPfam hit to PF01047, MarR family, score 6.1e-19" FT CDS 50858..51823 FT /transl_table=11 FT /locus_tag="BPP2336" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1965" FT /db_xref="GOA:Q7W816" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W816" FT /protein_id="CAE37633.1" FT /translation="MFKSMLAAVLALGMSGPAAQAAAPLDGPLTIVVGYAPGGSSDRIA FT RLVAERLKDRVGVPVIVENKTGAGGRIAAQALRQASAQQNVLMLANPAVMVVAPLVYAQ FT PGYDAQRDFQPLSLASRYKFALAVPAGSPLRTLADLRQWIAAHPKQLTVGVPATGSLPH FT FFALMLGREVGEDVEVVGYRGSGPLITELIGGILGQGIDTLDTLLPQHQAGKLRILATS FT GQTRDAQLPDVPTFREAGVDLAADGWNAFFAPAAMPADKVERLGRDIAAVMSEPAMQQA FT VRAVNLEPVAQDAAQTAASLQAYRDQWEPVVRQSGFIATQ" FT misc_feature 50858..50920 FT /note="Signal peptide predicted for BPP2336 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.833 between residues 21 and 22" FT misc_feature 50987..51808 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.7e-42" FT CDS 51840..53405 FT /transl_table=11 FT /locus_tag="BPP2337" FT /product="putative sulfatase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1966" FT /db_xref="GOA:Q7W815" FT /db_xref="HSSP:1E33" FT /db_xref="InterPro:IPR017849" FT /db_xref="UniProtKB/TrEMBL:Q7W815" FT /protein_id="CAE37634.1" FT /translation="MTQVQNVLFIMADQLRADHLGCYGHPYLRTASLDALARRGVRFER FT AFVNSGVCGPSRMSYYTGRYPSSHGATWNRVPLSVGEVTLGEYLAGHGLDLALAGKTHV FT LPDAAGMQRLALDGGSELGLLLSRGGFRELGRYDGHHEPGAESGYPAFLRRHGYDSPDP FT WSDYVISAIDAGGQVVSGWHMRNTYLPSRVREAHSETAYMTGQALDFMRQRGGQPWVLH FT LSYVKPHWPYMAPAPYHSMYRPEQCLPVLRTAAEREDAHPVVQAYRQHEESLSFAREDC FT VRIVRPAYQGLIQQLDDHLGRLFDYMEGAGLMRNTLVIFTSDHGDFLGDHWLGEKELFY FT DTVQRVPLIVMDPSPTGDAVRGTVSGKLVEGVDIVPTILQALEVPLPTHRIEGRALQPL FT LHGATQAPWRDCVFSELDYSFRQARLLRGKTPQQARAWSARTDRWRYVYWQDESEQLYD FT LANDPGELQDLGRCPAHEAVRAEMRARLLEWSLGRKTRVTIADSAVERSTNAHKRAGIH FT FGQW" FT misc_feature 51852..53228 FT /note="HMMPfam hit to PF00884, Sulfatase, score 1.6e-53" FT misc_feature 53106..53129 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(53427..55100) FT /transl_table=11 FT /gene="fadD" FT /gene_synonym="oldD" FT /locus_tag="BPP2338" FT /product="long-chain-fatty-acid--CoA ligase" FT /EC_number="6.2.1.3" FT /note="Similar to Escherichia coli FT long-chain-fatty-acid--CoA ligase FadD or OldD or B1805 FT SWALL:LCFA_ECOLI (SWALL:P29212) (561 aa) fasta scores: E(): FT 6.9e-126, 58.84% id in 554 aa, and to Brucella melitensis FT long-chain-fatty-acid-CoA ligase BMEI1632 SWALL:Q8YF90 FT (EMBL:AE009599) (639 aa) fasta scores: E(): 8.9e-126, FT 58.09% id in 556 aa. Note: Also similar to BPP3729 (564 aa) FT fasta scores: E(): 4.8e-114, 55.835% identity in 557 aa FT overlap" FT /db_xref="GOA:Q7W814" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q7W814" FT /protein_id="CAE37635.1" FT /translation="MEKIWLASYPAGVAPEIDSGAHASLAEVIEDSCRTFAGKTAYISL FT GRTLSYAGLDRRSRAFAAWLQARGLGRGERVALMMPNLLQYPICLFGAWRAGCTVVSCN FT PLYTPRELAHQLADSGARAIVVADNFAATLQQALPQTALEHVVVTSIGEQLGWPRGPVV FT DFVVRRVKRMVPAWSLPGARRLRDVLAEGERLPHAAPALGHADLACLQYTGGTTGVAKG FT AMLTHGNLIANLCQAYAWVRPLVKEGRECVVTALPLYHIFALTANCLTFLKIGASNLLI FT VNPRDIPAFVRELRKTPFSCITGVNTLFNALLDHPGFARLDFSRLRLTLGGGMAVQRSV FT AERWRAVTGKPLAQAYGLTETSPAVTINPLDAPDFTGSIGLPVPSTELSIRDEHGEELP FT LGATGEICVRGPQVTPGYWRRPDETALSFHADGFLRTGDMGYVDPRGYVFLVDRKKDMI FT LVSGFNVYPNEIEDVVALHPGVREVAAVGVPDARSGEAVKLFVIRKDPDLDAAALIAYC FT RANLTGYKVPRSVEFRTELPRTNVGKILRRQLRDEAGRPA" FT misc_feature complement(53646..54953) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme, score FT 9.5e-131" FT misc_feature complement(54438..54473) FT /note="PS00455 Putative AMP-binding domain signature." FT CDS complement(55109..55657) FT /transl_table=11 FT /locus_tag="BPP2339" FT /product="Conserved hypothetical protein" FT /note="Similar to Pseudomonas aeruginosa hypothetical FT protein PA5222 SWALL:Q9HTW8 (EMBL:AE004935) (160 aa) fasta FT scores: E(): 2.4e-15, 37.58% id in 149 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W813" FT /protein_id="CAE37636.1" FT /translation="MKLQWIERVPPRWRARLLRVGFNLHPAFRATGGRVVEIAADFLHI FT RIRLPLGRRTRNIVGSMYGGSLFSVTDGAHPTMLMMALGPGVIVWDKAATIRYRKPAYA FT TLYADFRIGRDEIAAIRAELARDHETTRTYSVALSDRHGEVYAVVERTVYIADKTFYKR FT KTQAGAPARTPLEPAPPGN" FT CDS complement(55654..56853) FT /transl_table=11 FT /locus_tag="BPP2340" FT /product="putative acetyl-CoA acyltransferase (thiolase) FT protein" FT /EC_number="2.3.1.16" FT /note="Similar to Ralstonia solanacearum putative FT acetyl-CoA acyltransferase protein RSC0475 or RS04420 FT SWALL:Q8Y261 (EMBL:AL646059) (399 aa) fasta scores: E(): FT 5.8e-96, 65.82% id in 398 aa, and to Escherichia coli FT probable beta-ketoadipyl CoA thiolase PaaJ or B1397 FT SWALL:PAAJ_ECOLI (SWALL:P77525) (401 aa) fasta scores: E(): FT 6e-47, 44.85% id in 408 aa" FT /db_xref="GOA:Q7W812" FT /db_xref="HSSP:1AFW" FT /db_xref="InterPro:IPR002155" FT /db_xref="UniProtKB/TrEMBL:Q7W812" FT /protein_id="CAE37637.1" FT /translation="MSKQIQDAYIVAATRLPVGKRNGAYATTRPDDMLAAVLRAVLAQV FT PALLPERINDVITGCAMPEAEQGMNVSRIGLLLAGLPQSVAGVTVNRFCASGLQAVADA FT ANRIRLGMADVMIGAGTESMSAMPQIMGNKVAMNPAVFAHEENLGMAFGMGLTGEKVAE FT QWKVSREDQDAFSLSSHQKACAAIAAGHFKAEITPYQVRTHLAGGRDGAVRVAERWIEQ FT DEGPRPDSTAEALARLRPVFAARGSVTAGNSSQMSDGAAAVVLVSERVLREYGLQPLAR FT FVDFAVAGVPPEIMGIGPRMAIPKVLARSGIAQQDLDWIELNEAFAAQSLAVMRDLELD FT PAKVNPLGGAIALGHPLGATGAIRTATIVHGLRRTGGKYGMVTMCIGTGMGAAGIFEAL FT " FT misc_feature complement(55660..56034) FT /note="HMMPfam hit to PF02803, Thiolase, C-terminal domain, FT score 2.3e-63" FT misc_feature complement(55675..55716) FT /note="PS00099 Thiolases active site." FT misc_feature complement(55771..55821) FT /note="PS00737 Thiolases signature 2." FT misc_feature complement(56047..56841) FT /note="HMMPfam hit to PF00108, Thiolase, N-terminal domain, FT score 4.5e-85" FT misc_feature complement(56530..56586) FT /note="PS00098 Thiolases acyl-enzyme intermediate FT signature." FT CDS complement(56863..59253) FT /transl_table=11 FT /locus_tag="BPP2341" FT /product="Putative 3-hydroxyacyl-CoA dehydrogenase FT oxidoreductase" FT /EC_number="1.1.1.157" FT /note="Similar to Ralstonia solanacearum putative FT 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein FT RSC0474 or RS04421 SWALL:Q8Y262 (EMBL:AL646059) (827 aa) FT fasta scores: E(): 6.7e-108, 53.07% id in 814 aa, and to FT Escherichia coli probable 3-hydroxybutyryl-CoA FT dehydrogenase PaaH or B1395 SWALL:PAAH_ECOLI (SWALL:P76083) FT (475 aa) fasta scores: E(): 2.9e-17, 30.51% id in 462 aa" FT /db_xref="GOA:Q7W811" FT /db_xref="HSSP:1F0Y" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W811" FT /protein_id="CAE37638.1" FT /translation="MSKFVVKQAAVLGAGVMGAQIAAHLANAGVPVMLYDLTAPQGERN FT AVVHKALAGLRKLEPAPLARPDRLALITPAHYDDDLERLGGCDLVIEAIAERLDWKTDL FT YHRIAAHVAPHAIVASNTSGLSIETLAGALPEALRPRFCGIHFFNPPRYMRLVEIIATR FT HTRPEVVDQLEGWLTSRLGKGVIRALDTPNFVANRIGVFSILAAMRHTQRLGLGFDEVD FT ALTGPKIGRPKSATYRTADVVGLDTLAHVVATMRDNLPDDPWHAYFELPAWLQALIDQG FT ALGQKSGAGVYRKAGKEIQVVDPASGQYRPSAGALADETAAILKERDPARRLAQLRAST FT HPQAQFVWSLLRDIFHYSACQLAGVADNARDLDLAMRWGFGWAQGPFETWQAAGWQDTA FT RAIAEDIAAGRAMSAAPLPDWALDSGRTGVHTPQGSYSARDGQLRPRSALPVYRRQLFP FT EKLVGESPAPRGETVWEAPGVRLWRLPEQDGGIAILSVTSKMHTIGEEVLDGIQQAIAR FT AEREFDALVMWHDAPFAVGANLEQVYQVCAAGEFERLEATVEQFQRTSLALARAQIPTV FT VAVQGMALGGGCEFIMHASHRVLALESYIGLVEAGVGLIPAGGGSKALAVRAARLAAAT FT ATPAEVFPYLQPVFQNIATAQVAKSALQAMDMGYAHNGDTVVFHPDELLWVALRQARAA FT ADSGHAPAPAPRDIPVAGRTGIANFEMVLVNMREGGMISAHDYRVARSAAVALCGGEAE FT AGTRVDEQWLLAVERREFMALLRTPETQARIRHTLDTGKPLRN" FT misc_feature complement(57325..57789) FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family, score 3.9e-07" FT misc_feature complement(58372..58674) FT /note="HMMPfam hit to PF00725, 3-hydroxyacyl-CoA FT dehydrogenase, C-terminal domain, score 0.00074" FT misc_feature complement(58681..59247) FT /note="HMMPfam hit to PF02737, 3-hydroxyacyl-CoA FT dehydrogenase, NAD binding domain, score 1.2e-31" FT misc_feature complement(59170..59253) FT /note="Signal peptide predicted for BPP2341 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.991) with cleavage site FT probability 0.938 between residues 28 and 29" FT CDS complement(join(59324..59548,59548..60624)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2342" FT /product="Putative fatty acid transport system, membrane FT protein (pseudogene)" FT /note="Similar to Vibrio cholerae long-chain fatty acid FT transport protein VC1042 SWALL:Q9KT63 (EMBL:AE004185) (432 FT aa) fasta scores: E(): 6.3e-37, 33.78% id in 444 aa, and to FT Escherichia coli long-chain fatty acid transport protein FT precursor FadL or Ttr or B2344 SWALL:FADL_ECOLI FT (SWALL:P10384) (448 aa) fasta scores: E(): 5.7e-16, 29.84% FT id in 439 aa" FT /db_xref="PSEUDO:CAE37639.1" FT misc_feature complement(60550..60624) FT /note="Signal peptide predicted for BPP2342 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 25 and 26" FT CDS complement(60696..62639) FT /transl_table=11 FT /locus_tag="BPP2343" FT /product="Putative enoyl-CoA hydratasee" FT /EC_number="4.2.1.17" FT /note="Similar to Deinococcus radiodurans enoyl-CoA FT hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA FT dehydrogenase DRr1487 SWALL:Q9RUA4 (EMBL:AE001993) (708 aa) FT fasta scores: E(): 5.7e-44, 32.98% id in 670 aa, and to FT Pseudomonas fragi fatty oxidation complex alpha subunit FT [includes: enoyl-CoA hydratase FaoA SWALL:FAOB_PSEFR FT (SWALL:P28793) (715 aa) fasta scores: E(): 6.5e-28, 34.13% FT id in 668 aa" FT /db_xref="GOA:Q7W810" FT /db_xref="HSSP:1F0Y" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W810" FT /protein_id="CAE37640.1" FT /translation="MNTPDLAYTHWRLHREADGLAWLALARADAAANSLSAEVMAELAA FT VLDALQAQPPKELVILSGKENGFIVGADINEFGALQTPQQARELVARGWQLFNRLAATP FT YPTLALIRGHCLGGGLELALACRYRIAADDADTALGLPEAMLGIFPGWGGMRRLPALIG FT APAALDMMLTGRRVDARRAAALGLVDARVPPRLLQAAARATVLSGRAPRRARGLPAWLN FT RWPLKALAARRARQSVAAKDPQGHYPAPRAIIDIWARHGGNALHAPDLIDGILASDTAR FT QLLRVFRLQERLKGYGKAAVDAPVRRVHVVGAGVMGGDIAAWCAYRGLTVTLQDQDMAR FT IAPALARAGAFFARKLKDRRAARAAFDRLVPDPQGDGVAQADLVIEAISESAQAKQALY FT RQLEPRLKPGALLATNTSSLSLAGLAQVLDQPQRLVGIHFFNPVARMPLVEVVLAADSD FT PRALARACAFVGRIGKLPLPVRDAPGFLVNAVLAPYMLEAMRCVDEGMAPAAIDAAMAA FT FGMPMEPLELADTVGLDIAAAAGAQLTGEHAPPRCLAERLARKELGRKSGRGFYAWRDG FT KAVKPAARGVPPGLVDRLLQPLIDSARERVAAGVVADADLADAGAIFGTGFAPYTGGPL FT QYASQREAVQRP" FT misc_feature complement(60921..61190) FT /note="HMMPfam hit to PF00725, 3-hydroxyacyl-CoA FT dehydrogenase, C-terminal domain, score 2.6e-22" FT misc_feature complement(61194..61736) FT /note="HMMPfam hit to PF02737, 3-hydroxyacyl-CoA FT dehydrogenase, NAD binding domain, score 4.8e-35" FT misc_feature complement(62061..62579) FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family, score 1.7e-47" FT CDS complement(62636..63928) FT /transl_table=11 FT /locus_tag="BPP2344" FT /product="Putative thiolase" FT /EC_number="2.3.1.16" FT /note="Similar to Yersinia pestis putative 3-ketoacyl-CoA FT thiolase YPO2746 SWALL:Q8ZD46 (EMBL:AJ414153) (436 aa) FT fasta scores: E(): 9.3e-44, 36.08% id in 424 aa, and to FT Escherichia coli probable 3-ketoacyl-CoA thiolase YfcY or FT B2342 SWALL:YFCY_ECOLI (SWALL:P76503) (436 aa) fasta FT scores: E(): 1.8e-42, 35.46% id in 423 aa" FT /db_xref="GOA:Q7W809" FT /db_xref="HSSP:1AFW" FT /db_xref="InterPro:IPR002155" FT /db_xref="UniProtKB/TrEMBL:Q7W809" FT /protein_id="CAE37641.1" FT /translation="MRFQPVYIVDGTRSPFLKARNGPGPFSAADLAVQAGRALLLRQPF FT APTDLDEVIVGCAAPSPDEVNIGRVIALRLGCGNRVPGWTVMRNCASGMQALDSAIANL FT QLGRSSLVLAGGTDALSRAPLLFSDDMVKWLARWYGTRGLGARLRALGALRLRYLAPVI FT GLLKGLTDPVVGLSMGQTAENLATRFGIDRAAMDAYAARSHLRVLAAREAGRLGEIVPM FT ADTRGTVYPDDDGVRDDSTPQRLARLRPAFDKPWGNITAGNSSQVTDGAAMLLLASEAA FT VRKWGLRPLGRILDSQWAGLDPAQMGLGPVHAATPIMQRHGLGLHDLDLWEINEAFAAQ FT VLACLAAWNDEAYCREHFGTGAWGRLDQDRLNVDGGAIALGHPVGASGARIVLHLLQAL FT KARGMRHGMAAICIGGGQGGAMLVENLEERA" FT misc_feature complement(62654..63076) FT /note="HMMPfam hit to PF02803, Thiolase, C-terminal domain, FT score 2.1e-51" FT misc_feature complement(62669..62710) FT /note="PS00099 Thiolases active site." FT misc_feature complement(62765..62815) FT /note="PS00737 Thiolases signature 2." FT misc_feature complement(63089..63922) FT /note="HMMPfam hit to PF00108, Thiolase, N-terminal domain, FT score 6.4e-46" FT CDS complement(63941..66274) FT /transl_table=11 FT /locus_tag="BPP2345" FT /product="Putative acyl-CoA dehydrogenase" FT /EC_number="1.3.99.-" FT /note="Similar to, although shorter in its N-terminal FT region than Ralstonia solanacearum putative transmembrane FT acyl-CoA dehydrogenase oxidoreductase protein RSC0537 or FT RS04929 SWALL:Q8Y200 (EMBL:AL646059) (835 aa) fasta scores: FT E(): 1.3e-186, 59.97% id in 777 aa, and to, although FT shorter in its N-terminal region than Pseudomonas FT fluorescens very-long-chain acyl-CoA dehydrogenase homolog FT YafH SWALL:Q9AE72 (EMBL:AJ009579) (740 aa) fasta scores: FT E(): 3.2e-168, 59.76% id in 691 aa" FT /db_xref="GOA:Q7W808" FT /db_xref="InterPro:IPR015396" FT /db_xref="UniProtKB/TrEMBL:Q7W808" FT /protein_id="CAE37642.1" FT /translation="MNAVLVVLSGAALLGIGPLRRALLSRPILAAYRKVLPAMSDTERE FT ALEAGTVWWEGELFGGRPDWRKLLDYPRPVLSAAEQRFLDHETEQACRLVDDWHITHER FT FDLPPQVWAYIREQGFLGMIIPKEYDGLGFCAHAHSAIVTKLSTRSSALAVSVMVPNSL FT GPAELLLHYGTEAQKRHYLPRLARGEEIPAFALTSPWAGSDAAAIPDHGTVCKGQWQGQ FT EVLGMRVTWDKRYITLAPVCTLLGLAFRLYDPDGLLGGRKDLGITCALVPHDHPGVDTG FT RRHFPLNAMFMNGPTRGTDVFMPLEFIIDGPAMAGQGWRMLMECLAAGRSISLPSSNAD FT MAQLTARAVGAYARVRSQFRMPVGKFEGVEEALARIGGHTYLMDAARVMTAGAVDLGEK FT PAVASAIVKYHVTERARQVVNDGMDISGGKGICLGPSNFLGRAYQQLPIGITVEGANIL FT TRSLIIFGQGAIRCHPYVLAEMRAAQDPDAARGLREFDRALWGHARHVAGNALRALGGA FT LSGARLGRAPRAAAPSMHAYYRALSRYSSAFALLADACMLALGGSLKRRERLSARLGDI FT LAQMYLASAVLKRFEDDGRQAEDEPLAHWAVRDALYRLQQAFEGVLDNLPNRLVAWTMR FT CIIFPWGHPQAEPDDRLGQAVAQLLIAPGAARDRLTASCFIPANEDEPVGALEQALAAA FT IAAEPLEARIRAAEKSGDLEGDPRANVRDIAQAAHAAGVLDEDDYRLVERRNRLRDRVI FT GVDDFPFDYGITGALRPAARRQAA" FT misc_feature complement(64886..65329) FT /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, FT C-terminal domain, score 4.8e-27" FT CDS complement(join(66300..66773,66773..66964)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2346" FT /product="Putative TetR-family regulatory protein FT (Pseudogene)" FT /note="Similar to Ralstonia solanacearum putative FT transcription regulator protein RSC0538 or RS04928 FT SWALL:Q8Y1Z9 (EMBL:AL646059) (340 aa) fasta scores: E(): FT 2.9e-22, 39.04% id in 210 aa, and to Burkholderia cepacia FT putative transcription factor SWALL:Q93L29 (EMBL:AF029344) FT (246 aa) fasta scores: E(): 2.3e-18, 34.9% id in 212 aa" FT /db_xref="PSEUDO:CAE37643.1" FT misc_feature complement(66788..66928) FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 1.5e-17" FT CDS 68122..68886 FT /transl_table=11 FT /locus_tag="BPP2347" FT /product="Putative luxR-family regulatory protein" FT /note="Similar to Ralstonia solanacearum probable FT transcription regulator protein RSC1185 or RS05717 FT SWALL:Q8Y059 (EMBL:AL646063) (222 aa) fasta scores: E(): FT 4.1e-18, 41.22% id in 228 aa, and to Bacillus subtilis YfiK FT SWALL:P94439 (EMBL:D78508) (220 aa) fasta scores: E(): FT 6.9e-05, 24.34% id in 230 aa" FT /db_xref="GOA:Q7W807" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q7W807" FT /protein_id="CAE37644.1" FT /translation="MWKNKSEETMAKMVLIEAHPLLRLGLWQILSELDDIWEIQGMGVA FT DLSKADATQSEADLLIYGLPTDPDLAVGALSEIQSVLSPKRILLLSDIMPLPIPMQALP FT VNAVCGCLPKTAPVEVLEAAIRLVMAGGQCFPGEQALQPAIAAGYPSAMRVTNDGVKPT FT MPISTGAQLLQITPRQYEVLVLLARGYPIKTVSRMLNISVATAKTHACTLYQRLHVKNK FT GEAVYTALQRGATLEWAEAGAREAERPTYVCR" FT misc_feature 68635..68832 FT /note="HMMPfam hit to PF00196, Bacterial regulatory FT proteins, luxR family, score 5.7e-05" FT CDS 69190..69852 FT /transl_table=11 FT /locus_tag="BPP2348" FT /product="putative LuxR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1969" FT /db_xref="GOA:Q7W806" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q7W806" FT /protein_id="CAE37645.1" FT /translation="MRMTTVLIEDYALLRIAIQHVLEHGRGAGQVRALASAELEAVASS FT VDRPPELAILGCSGVSEHDQLMLTRVIATLAPRNMLLLYPELDLAVLTAAARAGVAGYV FT AKSLSPDALGAAISLVMAGGQCYPLPVQASATPVRGAMQLTQRQEQILRLMVQGKTMRE FT ISREVGTSVATVKSHARTLYWKLNARNQAAAAYAAVSLGLVPGLREDKDTGPADPPA" FT misc_feature 69610..69807 FT /note="HMMPfam hit to PF00196, Bacterial regulatory FT proteins, luxR family, score 4.9e-14" FT CDS 69954..71381 FT /transl_table=11 FT /gene="pgm" FT /locus_tag="BPP2349" FT /product="phosphoglucomutase" FT /EC_number="5.4.2.8" FT /note="ortholog of Bordetella pertussis (BX470248) BP1970" FT /db_xref="GOA:Q7W805" FT /db_xref="HSSP:1K2Y" FT /db_xref="InterPro:IPR016055" FT /db_xref="UniProtKB/TrEMBL:Q7W805" FT /protein_id="CAE37646.1" FT /translation="MDTPTMHGSFDWDGSRTGAGVFGPYDIRGRTGEEIDAGFAHALGL FT TLGRRAVATHAGAVVVGRDATLSSVALAAALQAGIRAAGTHVIDIGRVTTPMMYYATRL FT TETGAGVAVTGRRDGQAHSSFKIMMHGAALYGAGLGELREAMIEADGAADAAESPGARR FT QLAVLPCYQARLLSDIRLRRPLKVALDCGHGVTSLYAPDLLRELGCEVTALFADGDPGP FT ADHPANPGDPRNLQDLIYCLRYSDCEVGLAFDGDGDRLAVVSKSGEIIWADRLLVLLAR FT DVLARRPGASVIYDVKCGRLAPRGIEQAGGEPLIWKSGPGQIKARMQETGALLAGEMSG FT RLYFKDRWYGFDDAIYAAARVLELLSGVADATALLTQAPASFTAPETRVALPEADLQAI FT LAAMQVRGGFPGARRITYLDGVRVDYDDGFGLVRQACGAAVLALRFEGDTAAALARIQA FT EFRRELARIAPHLSITF" FT misc_feature 70002..70424 FT /note="HMMPfam hit to PF02878, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain I, score 7.2e-08" FT misc_feature 70458..70760 FT /note="HMMPfam hit to PF02879, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain II, score 1.5e-24" FT misc_feature 70764..71099 FT /note="HMMPfam hit to PF02880, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain III, score 4.1e-26" FT misc_feature 71109..71360 FT /note="HMMPfam hit to PF00408, FT Phosphoglucomutase/phosphomannomutase, C-terminal domain, FT score 0.039" FT CDS 71391..72962 FT /transl_table=11 FT /gene="pgi" FT /locus_tag="BPP2350" FT /product="putative glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="ortholog of Bordetella pertussis (BX470248) BP1971" FT /db_xref="GOA:Q7W804" FT /db_xref="InterPro:IPR001672" FT /db_xref="UniProtKB/TrEMBL:Q7W804" FT /protein_id="CAE37647.1" FT /translation="MPENAQPHAVIPAADLQLSAQSPQWRVFAAAAAGASLVARPLRVI FT EAAGIYVDLSMQRHSSALAQAGLALLQARDVLGARAALFAPGAPDAAHGRYPVLRAGYG FT AHPEEQCDIEVEIEYARMLEFVRELDRGGACPAVLYLGGGAGQWALRLALQAFGGPAQR FT RQLRFVSGGDAAALHEALAGLGPRRTLVVAASRGFEPSETLDNARAAIDWLRRAGIDDV FT SAHLVTVTGNESAARALGVAAARVFRLPSWLQPRHELWSVGALPVALALSVDMLKALRS FT GAAAMDQHFLQAAPAVNAPMQMALAAVANTSAMHWPTHALAVYSARLAALPACVQQLEM FT TLAGRAPASLPAYSVVWSPAGAPGPGAFFEWLHRAPAGAPVDFIAGLDEYPASPPAHRA FT LLANCLAQREALLRGLPAGPGQPAAGGGRPSTLVVLRQVDPRAVGALLALYEHKAFVQA FT ALWGAALGGADQAQACQRLAQDIARQLAVPPAAGPVDWGHDSSTAFWIDRYREQGGAGA FT AAGRTA" FT misc_feature 71547..72908 FT /note="HMMPfam hit to PF00342, Phosphoglucose isomerase, FT score 1.3e-34" FT CDS 73145..74098 FT /transl_table=11 FT /gene="srpH" FT /locus_tag="BPP2351" FT /product="serine acetyltransferase" FT /EC_number="2.3.1.30" FT /note="ortholog of Bordetella pertussis (BX470248) BP1972" FT /db_xref="GOA:Q7W803" FT /db_xref="InterPro:IPR001451" FT /db_xref="UniProtKB/TrEMBL:Q7W803" FT /protein_id="CAE37648.1" FT /translation="MSGSSHYPVANWNLDGIVSGLRGARQEWRGPRGRLREESESGVRE FT FPSQESLRDIMRQLVGALFPMRLGPIDLREEVEDFYVGHTIGAALDALLHQVCLELQHL FT GRDDPQPYGQVLERAVDIVRRFGAELPAVRKALDLDVTAAYQGDPAARSVDEVLLCYPG FT VTAMIHHRLANVLYRLGAPMLARIVAEIAHSDTGIDIHPGATIGRSFFIDHGTGVVIGE FT TAIIGERVRLYQMVTLGAKRFPPGENGELKKGLPRHPIIEDDVVIYAGATILGRITIGQ FT GSTIGGNVWLTHSVPPNSTVTQAGAINDMPDCGLGG" FT misc_feature 73793..73846 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 6.4" FT misc_feature 73916..73969 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 27" FT misc_feature 73970..74023 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 1.6e+02" FT CDS join(74160..74618,75650..76183,76183..76425) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2352" FT /product="putative membrane protein (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1973" FT /db_xref="PSEUDO:CAE37649.1" FT misc_feature join(74178..74246,74313..74381,74400..74453,74481..74549) FT /note="12 probable transmembrane helices predicted for FT BPP2352 by TMHMM2.0 at aa 7-29, 52-74, 81-98, 108-130, FT 143-165, 170-192, 224-246, 256-278, 287-306, 310-327, FT 334-356 and 376-398" FT CDS complement(74613..75563) FT /transl_table=11 FT /locus_tag="BPP2353" FT /product="transposase for IS1002" FT /note="transposase for IS1002 element" FT /db_xref="GOA:Q7TT87" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:Q7TT87" FT /protein_id="CAE37650.1" FT /translation="MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKW FT LARFRSEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSLATVA FT RYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVGHRITGDRAQNRNR FT GIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQATAYYASLGVRIDRVMTDNGSG FT YVSRTFRAVCVELGIRHIRTRPYTPKTNGKAERLVQTCLREWAYARPYTSSAERQAALQ FT PFIDRYNWCRPHSALGHQPPITRIPDVNNLLRIDT" FT repeat_region 74613..74641 FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1002 element" FT repeat_region complement(74613..75653) FT /note="IS1002 insertion sequence" FT misc_feature complement(74646..75182) FT /note="HMMPfam hit to PF00665, Integrase core domain, score FT 6.8e-30" FT repeat_region complement(75625..75653) FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1002 element" FT CDS join(76438..76947,76951..77262) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2354" FT /product="putative Sir2-like regulatory protein FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1974" FT /db_xref="PSEUDO:CAE37651.1" FT misc_feature join(76513..76947,76951..77121) FT /note="HMMPfam hit to PF02146, Sir2 family, score 7e-42" FT CDS complement(77387..78253) FT /transl_table=11 FT /locus_tag="BPP2355" FT /product="putative inositol monophosphatase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1975" FT /db_xref="GOA:Q7W802" FT /db_xref="InterPro:IPR017955" FT /db_xref="UniProtKB/TrEMBL:Q7W802" FT /protein_id="CAE37652.1" FT /translation="MFPHSMNRTFSRDETRRIAALLAEAARSEVLPRFRHLTEDAVRGK FT SSPRDLVTIADEEAERHIAARLGKLYPGAVLIGEEASARNPALLNMLVDADLAFLIDPI FT DGTRNYVAGLPLFGMMVAVCHRGDVLAGVIYDPIGHDAALAVRGEGAWIDYEDGTQQAL FT HMAGAAPANEMDGMISTSNLPDGLREQVTANQARLGSTASLRCAAHEYRLAASGHCHVL FT LYNKLTPWDHAAGWLLHREAGGYSAHFDGSPYKPTHRSGGLLYAPDGGTWHTAHQALLG FT DAVPLAV" FT misc_feature complement(77393..78214) FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family, score 7.5e-31" FT CDS complement(78415..79884) FT /transl_table=11 FT /gene="gabD" FT /locus_tag="BPP2356" FT /product="succinate-semialdehyde dehydrogenase [NADP+]" FT /EC_number="1.2.1.16" FT /note="ortholog of Bordetella pertussis (BX470248) BP1976" FT /db_xref="GOA:Q7W801" FT /db_xref="HSSP:1BXS" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q7W801" FT /protein_id="CAE37653.1" FT /translation="MTQLTQPLSRAELLRDACYIDGKWVGAGNGPSIPVDNPSTGKTII FT SVPKLGRKEAEQAIDAAEAALPAWSARTGKERAAILLKWAQLTMENQQDLAVIMTSEQG FT KPVAEAAGEIAYAASFLEWFAEEAKRIDGDILQSPKGGQRLMVLKQPIGVTAAITPWNF FT PAAMITRKVGPALAAGCTMVVKPAQQTPLTALALAVLAEQAGVPAGVFQVVTGSSREIG FT AALCESEVVRKLSFTGSTEVGRTLMEQCAPTIKKLSLELGGNAPFIVFDDADLDRAIDG FT ILASKYRNAGQTCVCANRIYVQAGVYEEVAKRLVEKVNAMKVGDGFEQGVTQGPLIDTA FT AVAKVQEHIADATAHGAKVIAGGQPHALGGSFFQPTVVRDVTQSMRFAVEETFGPVAPL FT FKFESEDEVIGMANNTIFGLAAYFYTRDYARIWRVSEALEYGIVGINTGIISNEVGPFG FT GVKQSGLGREGSKYGIEDYLELKYLCVDLGA" FT misc_feature complement(78424..79818) FT /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase FT family, score 4e-204" FT misc_feature complement(78991..79026) FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT misc_feature complement(79087..79110) FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT CDS complement(79964..81265) FT /transl_table=11 FT /gene="goaG" FT /locus_tag="BPP2357" FT /product="4-aminobutyrate aminotransferase" FT /EC_number="2.6.1.19" FT /note="ortholog of Bordetella pertussis (BX470248) BP1977" FT /db_xref="GOA:Q7W800" FT /db_xref="HSSP:1GBN" FT /db_xref="InterPro:IPR018253" FT /db_xref="UniProtKB/TrEMBL:Q7W800" FT /protein_id="CAE37654.1" FT /translation="MHTAFHLPNEPEMKNRDLNTRRTLATPRGVGVMCDFYAVRAENST FT LWDAEGKEYIDFAGGIAVLNTGHRHPKVKAAIAAQLDNFTHTAYQIVPYEGYVSLAERI FT NAVAPIEGLKKTAFFTTGVEAVENAVKIARAYTGRSGVVAFSGAFHGRTMMGMALTGKV FT APYKLAFGPMPGDVFHVPFPNATQAISVADSLKALDLLFKVDIDPKRVAAIIIEPVQGE FT GGFNVTPPELMQALRKVCDEHGILLIADEVQTGFARTGKLFAMQHHSVQADLITMAKSL FT GGGMPISGVVGRAEVMDGPAAGGLGGTYAGNPLAVAAAHAVLDVIAEEKLCERAAELGK FT RLMDRLEGLRAKCPAIADVRGLGSMVALELNDPATGKPDAEAVKRIQQQAIERGLILLS FT CGVYGNVLRFLYPLTIPDDQFARALDILAETIAA" FT misc_feature complement(79970..81193) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00202, Aminotransferase class-III, FT score 3e-161" FT misc_feature complement(80414..80527) FT /note="PS00600 Aminotransferases class-III FT pyridoxal-phosphate attachment site." FT misc_feature complement(81101..81160) FT /note="PS00636 Nt-dnaJ domain signature." FT CDS 81366..82859 FT /transl_table=11 FT /locus_tag="BPP2358" FT /product="probable GntR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1978" FT /db_xref="GOA:Q7W7Z9" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z9" FT /protein_id="CAE37655.1" FT /translation="MRSIVGDLLLLRLGDVAEGPMNQRLYRAIREAILDGAIAADTRLP FT ATRDLAAELGIARNTVVHVYSQLQAEGYTHSRQGNGTFVTASLPDAYLASGRHARRPAI FT AAVRPTLSERGARIVDQVSASPYQWGAFMPGVPDLTEFPHQKFGRLFSTLWRNPHPEML FT TYAYGGGLPALREALAQHLALTRSIDCDPEQIIITEGSHQAIDLATRILGGHGDLAWIE FT NPGYWGARSVLIANGIRIEPLPVDEEGMQLPAEPVAQPPRFIFVTPSHQYPLGSVMSLA FT RRRQLLALARSWGSWIIEDDYDSEFRFSGRPISSLQGLEPDAPVIYLGTFSKTLYPGLR FT VGYLVLPKALAGAFQAAHAELYREGHLVTHAVLASFIAEGHYAAHIRRMRMLYGRRRAI FT LVNLIERRLGAQWLHPDSSDAGLHLVLDFPSGLDDKQVMQAAHARGVLTRALSRYYAEG FT TTPRQGLLLGYACVPENDIARKFELVLDSLAEVAQRSRA" FT misc_feature 81438..81617 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 4.4e-13" FT CDS complement(82860..83840) FT /transl_table=11 FT /locus_tag="BPP2359" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1979" FT /db_xref="InterPro:IPR002763" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z8" FT /protein_id="CAE37656.1" FT /translation="METGELDDTVYLYRISGISFERPLRPGMNILIGTASWTDPTLLAC FT GRFYPAAARTPQARLQYYATRFGMAEIDASFYALPDPHTAYLWAQRTPPGFVFNIKAFR FT LFTGHQTPRAALPADLRREVPGAGDAVFDDQVPGAVRDELWRRYVLALEPLRQAGKLGA FT VHCQFAPWVRREARGVARVRDCAARLRDAGGLVMAAEMRHASWFDSAAASNWTLALERE FT LELVHTVVDSPQGFANSVPPVWARTHPELALVRLHGRNAGAWNSRAAASSSRFQYEYSP FT QELAELAERVRRLAERARQTHAVFNTNYEDQGMRNAAGLAAALAP" FT misc_feature complement(82878..83699) FT /note="HMMPfam hit to PF01904, Protein of unknown function FT DUF72, score 1.5e-16" FT CDS join(84080..85699,85698..85925) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2360" FT /product="probable ATP-dependent DNA helicase (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1980" FT /db_xref="PSEUDO:CAE37657.1" FT misc_feature 84080..85357 FT /note="HMMPfam hit to PF00580, UvrD/REP helicase, score FT 2.5e-41" FT CDS 86004..87008 FT /transl_table=11 FT /locus_tag="BPP2361" FT /product="putative magnesium transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1981" FT /db_xref="GOA:Q7W7Z7" FT /db_xref="InterPro:IPR002523" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z7" FT /protein_id="CAE37658.1" FT /translation="MTQNVQAAGAPHGGVVASVAYLNGRRARDVPIDDIAGYERPEHGL FT LWIGLHDPDPGLLRRVTEDLGACDKNQEEMVEPHRRAKIIDYGNMVLIVAITVEIEGDR FT PVFGETQFLVGDGVLVTVRRGATATHSTLRERLEATPDLLKRGSDYVTSELLDLLVDRY FT VAAAARLESVVESAEQKLLIRGAKDADIRKLYRQRRDLLRIHTAIAPLAEICRRLARVE FT MSQIDEHARPYFGEVADRVLRVDELLNALREALAFAFEASQMIAQAQQNDTTRRLASWA FT AILAVPTAVAGIYGMNFEYMPELKAPWGYPVTLLAIGTVCSILYWRFRKSGWL" FT misc_feature 86121..87002 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF01544, CorA-like Mg2+ transporter FT protein, score 6.2e-46" FT misc_feature join(86832..86891,86919..86987) FT /note="2 probable transmembrane helices predicted for FT BPP2361 by TMHMM2.0 at aa 277-296 and 306-328" FT CDS 87071..87709 FT /transl_table=11 FT /locus_tag="BPP2362" FT /product="putative nuclease" FT /note="ortholog of Bordetella pertussis (BX470248) BP1982" FT /db_xref="GOA:Q7W7Z6" FT /db_xref="InterPro:IPR002071" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z6" FT /protein_id="CAE37659.1" FT /translation="MLRNKLQPRGGRRGLAGLLSALLLAALAALINWLWPQDHPQAPPA FT RQAPAASAGGVPAGSYTLTGPIVNVADGDTVTLRAPGGQRRIRMDSIDAPEEGHGNEQP FT GQPFAQASRQHLAGLVAGKTLTAQCYERDQFDRDVCALILPDGRSANRAQVEAGYAWAY FT TARRGDYLRDPAMPGLQRQAREAGRGLWAQSGAIEPWKWRYDCWRQRRC" FT misc_feature 87071..87154 FT /note="Signal peptide predicted for BPP2362 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.954 between residues 28 and 29" FT misc_feature 87107..87175 FT /note="1 probable transmembrane helix predicted for BPP2362 FT by TMHMM2.0 at aa 13-35" FT misc_feature 87251..87649 FT /note="HMMPfam hit to PF00565, Staphylococcal nuclease FT homologue, score 1.1e-20" FT misc_feature 87284..87358 FT /note="PS01123 Thermonuclease family signature 1." FT misc_feature 87419..87442 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 87806..90055 FT /transl_table=11 FT /locus_tag="BPP2363" FT /product="putative extracellular solute-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1983" FT /db_xref="GOA:Q7W7Z5" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z5" FT /protein_id="CAE37660.1" FT /translation="MTGMSRLLRIAALLLLGAMAGCSRESLINSPYPAGAMADNALYTA FT FVKRSPKYLDPASSYSTDETPYTYNIYEPLYGYHYLKRPYELVPRAAAAIDAPRYLDAQ FT GRELPADAPGAQIAESVYDIRLRPGIRFQPHPAFARRADGGYQYFPLAEGELADKFYIP FT DFPATGSRELVADDYVYALRRLASPRVVSPIYSLMADHIVGMKDYGDRLRARDQALRRD FT LPGGARTLPWLDLREADGFAGVQALDAHTLRIRVIGKYPQFKYWLAMTFTAPVPWEADR FT FYSQPGMAEHDLSLNTWPVGTGPYMLVESRQNWRHVLARNPNFRGEPYPCEGEPQDRAD FT GLLADCGKPTPFIDRVVFSVEKEAVPLTGKFMQGYYDVPQVERGEYGVSMLVAAGDSPD FT KAALYRDHGIRLPTTVETSNWYMGFNWLDPVVGQGDTPAQQERNRKLRQAISIAFDWEE FT YVAVFENSQAQVAYGPVPPGVLGYKPPPEGYNPVVYDLADGKPVRKPLDTARRLLAEAG FT YPDGRNAQTGAPLVLYYDAMTGAGASPMFDWMRRQLAKLGIQMDVRSTDYNRFQDKMRR FT GTAQLFLWGWNADYPDAENFLFLLYGPNAKASSGGENAANYANAEFDHLFEQMKLLDDG FT PEKEALIARMTAIVQRDAPWMFGYFPMSGGAYQQWVGNAKPTQMVRNTLQFMKIDPATR FT VARIDEWNRPLWWPLGVLVLLLALVIWPSYRALKRRERQTVYGARAAAPTPEQRP" FT misc_feature 87806..87919 FT /note="Signal peptide predicted for BPP2363 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.890 between residues 38 and 39" FT misc_feature 87836..89878 FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5, score 7.2e-10" FT misc_feature 87839..87871 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 89918..89986 FT /note="1 probable transmembrane helix predicted for BPP2363 FT by TMHMM2.0 at aa 705-727" FT CDS 90052..91029 FT /transl_table=11 FT /locus_tag="BPP2364" FT /product="putative oligopeptide transport system permease FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1984" FT /db_xref="GOA:Q7W7Z4" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z4" FT /protein_id="CAE37661.1" FT /translation="MTGYVIRRLLYGVLILIGVNLFTFVLFFAVNTPDDMARLAIGGQR FT VSQDAIEKWKTERGYDKPLFLNTRAEGAARYTDTVFYQRSVPLLAMDFGASDGGRDIGR FT EIRTRMGPSLALALPTFVLGLFASVVFSLTLVYFRATRLDFWGVVLCVVLLSISSLFYI FT IAGQWLFSKLLRLAPYSGFADGLDMVKFLAVPVVVAIIARLGPEARFYRTLFLEEIGKD FT YVRTARAKGLSESVVLFRHVLRNAMLPILTGTVSAIPLLFMGSLIAESFFGIPGLGSYT FT IDAINAQDFSIVRAMVFLGSALYIVGLILADISYTLADPRVRFE" FT misc_feature join(90076..90144,90397..90465,90484..90552,90595..90663, FT 90799..90867,90925..90993) FT /note="6 probable transmembrane helices predicted for FT BPP2364 by TMHMM2.0 at aa 9-31, 116-138, 145-167, 182-204, FT 250-272 and 292-314" FT misc_feature 90694..90909 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 9.4e-10" FT misc_feature 90697..90783 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 91035..92492 FT /transl_table=11 FT /locus_tag="BPP2365" FT /product="putative oligopeptide transport integral membrane FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1985" FT /db_xref="GOA:Q7W7Z3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z3" FT /protein_id="CAE37662.1" FT /translation="MPLFVFLWTDIALYLLVAAVLAYAWRVRRSPTLRATWGRVARDAP FT AMCSAVVLMCFVVVGLLDSVHYRARLAPAPGVAADAPPAYAPVVRSALDGLLAATVLAR FT PEKTYSEPLAVRQFTKETLLIDGKPQRDFPLLRSGGAHLQDPDAQRWPDLRQRFWTGLG FT LGAAAALAGGLLLALALALARRRASLRAALADLAANRTELPWRAMWITYAIICLLALTV FT SMLAGGYHVLGTDRTGNDVLWQALKSVRTALIIGSLTTLAMLPPALAFGIAAGYFKGKA FT DDAIQYLYTTLTSIPSVLLVAACALMMQVYIDNHAQLFDTSAARADLRLFLLCMILGLT FT GWAGLCRLLRAETLKLRELEYVQAARAFGVSHWRIMTRHLLPNVMHIVLITVVLEFSGL FT VLYEAVLSYLGIGVDPSMNSFGSMIDSARLEMSRDPMIWWNLLAAFGFMLALVLAANLF FT ADAVRDAFDPRTRRFRPARAAAAGALP" FT misc_feature join(91047..91115,91152..91220,91506..91574,91662..91730, FT 91788..91856,91893..91961,92019..92087,92184..92252, FT 92343..92411) FT /note="9 probable transmembrane helices predicted for FT BPP2365 by TMHMM2.0 at aa 5-27, 40-62, 158-180, 210-232, FT 252-274, 287-309, 329-351, 384-406 and 437-459" FT misc_feature 92091..92321 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 9.3e-08" FT misc_feature 92094..92180 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 92489..94165 FT /transl_table=11 FT /locus_tag="BPP2366" FT /product="putative ABC transporter, ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1986" FT /db_xref="GOA:Q7W7Z2" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z2" FT /protein_id="CAE37663.1" FT /translation="MTASAPLLRIEGLDVDVAGESGVTHAVKRLQLAVAQGETFALVGE FT SGSGKSMTALALLRLLPDAGRIVGGQIELGGTDLNDLSERAMRGVRGGRIGIIFQEPAT FT SLNPVMRVGDQIVETLAAHTPLRGAAARERAIDWLRRVGIPEPERRIDDYPFQFSGGQK FT QRLMIAIALAAEPKLLIADEPTTALDVTVQAQVLELLAGIQREMGMAVLLITHDLAVVR FT NVAHHVALMRGGEIVESADARTFFERPRHPYARELFEAIPTFAKRGRPLSAQGRAAGQG FT KAAPEAGAVVLDVQDLLVHYPVRKGVLRRVASWVEAVNGVTFTLRAGETLALLGESGCG FT KTTTGKALLRLVEGARVQGRAMLDGHDLLGASRRELRRLRQDIQIVFQDPFASLDPRMR FT VGDILEEGIASLRPELAASARRARAVGLLERVGLPADTPTRYPHEFSGGQRQRIAIARA FT LAVEPKVLICDEPTSALDVSVQAQILDLLRDLQAELGIAYLFIMHNFGVVEYLADRIAV FT MHGGRIVEMGPADTVLHAPRHEMTQRLLAAVPRLRFGAENA" FT misc_feature 92597..93190 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 9.9e-55" FT misc_feature 92618..92641 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 92960..93004 FT /note="PS00211 ABC transporters family signature." FT misc_feature 93470..94051 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.4e-60" FT misc_feature 93491..93514 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 93821..93865 FT /note="PS00211 ABC transporters family signature." FT CDS complement(join(94214..94642,94644..94766)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2367" FT /product="probable MarR-family transcriptional regulator FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1987" FT /db_xref="PSEUDO:CAE37664.1" FT misc_feature complement(94286..94597) FT /note="HMMPfam hit to PF01047, MarR family, score 9.5e-05" FT CDS complement(94800..96485) FT /transl_table=11 FT /locus_tag="BPP2368" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1988" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z1" FT /protein_id="CAE37665.1" FT /translation="MYAKTKTHHRPTRFAVPLLTAIMVAALAGCGGGGNSSSKRASAPV FT IPTNPGGPGNPGGPGGPGTPGNPDPTTPVDPVRAGLLETTLGNTGGATDSLLPLGADNA FT LGAVGKALDPTLKPVVDTTVGLTQQIGATTGLGAPVDGVLTQVGGTVSGLGDTVAGTGL FT PGGLSTGLGGLVDGLGKTVASTGGLLHADANNPEPLTAVLGNATGAVGALTSALGGQGG FT LLNPVNQLVGGIAGGVLDGPTQPILQPALTNTGTAVDNVASLGLGEALGGIGAGLDPAI FT SPVAGAVTNLTQTVGATTNLGAPVAGLLTSVGGTLAGAGGQLPGGLPVGGLDGVLGGLG FT GAVASAGGLLHATPGNTNPLGNTLAHATSAVSSLTGGLGLGGQGGLLSPITGSLGGITG FT GGANGGLLAPVTGLLAGVTGNLGGGAAPNGGLLGGLLGGVTGGGSGGSGGSGGSGGSGG FT APGAANGGLLGGLLGGVTGAVGSGAAGGGLLGGVTGAVGGGSAAGGNTGGAANGGLLGG FT ILSGVTGTVAGVTGGVTGGATGGAGGAGGGLLGGILGGVTSALK" FT misc_feature complement(join(94806..94871,94884..94949,94989..95054, FT 96381..96446)) FT /note="4 probable transmembrane helices predicted for FT BPP2368 by TMHMM2.0 at aa 13-35, 477-499, 512-534 and FT 538-560" FT misc_feature complement(96402..96485) FT /note="Signal peptide predicted for BPP2368 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.994) with cleavage site FT probability 0.278 between residues 28 and 29" FT CDS complement(96790..98502) FT /transl_table=11 FT /locus_tag="BPP2369" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1989" FT /db_xref="InterPro:IPR013686" FT /db_xref="UniProtKB/TrEMBL:Q7W7Z0" FT /protein_id="CAE37666.1" FT /translation="MKRTIATDLFCCSLVAGLAALPAASRADGPLRGNPVDALPQLERP FT TAPAAPAPALQAPTPEQRAVQARLAQRIVPRNFDVAGVHALPFDQVAAFLTPLAGKEIT FT VAQLVQQVDRITELYRSSGYPLSFALVQNQDFANGLVVVTVVEGHIGNVRIDGDIGNAK FT GRLETLAGPLLAEKPLTQATLERQLNLMRIVPGVKITPSLDLPRRADGATELVIAATHG FT KFTANGGVADLGTGMQPLVDLGAHSLTPLGEQLKLTTSIPLNSDDVKYVAGEARLPIGA FT DGFSIKVDGYHYQAKPQDDAIEYLGFDRKVTNDRIGVGVSYPFLLNNQRSLTGTLGMYA FT VNAKDRYTHRDSDRWLQQDTRVRAATAELRYIDILPQRSTDLTVSVSKGFDAMGAKKSI FT DTNYGYSAIPDVDLDFTRFNLNVRQAFTLPAQFGLVLSGAGQYSSDILPSSEQVSFGSW FT RFAMGYPQGEQSGDKGVGVSAEINRRFGLGWRYLSAVQPYAMADYARTWYNNKGLQELN FT ERHLSSLSLGVRFTDDKFYLFDFNVAKPVGSSTVNGDRDVRFNANYSLFYDAL" FT misc_feature complement(98422..98502) FT /note="Signal peptide predicted for BPP2369 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.773 between residues 27 and 28" FT CDS 98959..99777 FT /transl_table=11 FT /locus_tag="BPP2370" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1990" FT /db_xref="InterPro:IPR005330" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y9" FT /protein_id="CAE37667.1" FT /translation="MSPGDIVPLALQPGVVALSFLIAFFGSYVALVAAARIRTSAQDGV FT NVRGFVLIAAVSMGGIGIWGMHFIGMQAQRMPFEVGYALWLTLLSAAVAVAFSGMAFWY FT VGRQAFGLGRCVVAGRLAGLGVAAMHYIGIGAMRMPAVFLWNVELVALSVAVAMASAIV FT ALWLAFNVQREWQRVAAAAVMGLAVCGMHYTGAAAGVVVCTTAQTFADVQVGGVALPYV FT AFAGALAVLLAMRWQLHRSYRGHQDRTARRIDALLRETTTGRPASGHPGR" FT misc_feature join(99001..99069,99103..99162,99205..99273,99292..99360, FT 99403..99471,99496..99564,99592..99660) FT /note="7 probable transmembrane helices predicted for FT BPP2370 by TMHMM2.0 at aa 15-37, 49-68, 83-105, 112-134, FT 149-171, 180-202 and 212-234" FT misc_feature 99133..99321 FT /note="HMMPfam hit to PF03707, Bacterial signalling protein FT N terminal repeat, score 6e-14" FT misc_feature 99322..99507 FT /note="HMMPfam hit to PF03707, Bacterial signalling protein FT N terminal repeat, score 1.6e-09" FT CDS 99875..100051 FT /transl_table=11 FT /locus_tag="BPP2371" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1991" FT /db_xref="InterPro:IPR007047" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y8" FT /protein_id="CAE37668.1" FT /translation="MLTQLKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGF FT FDTIQTELSAEAP" FT misc_feature 99917..99985 FT /note="1 probable transmembrane helix predicted for BPP2371 FT by TMHMM2.0 at aa 15-37" FT CDS 100121..100651 FT /transl_table=11 FT /locus_tag="BPP2372" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1992" FT /db_xref="GOA:Q7W7Y7" FT /db_xref="InterPro:IPR000045" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y7" FT /protein_id="CAE37669.1" FT /translation="MENLLREHVWWAVYVAFNLLVVFYDLRVRRVPNRLLIAAALAQCA FT WLAWHAWGVQATPAAGARGWSDAGLGFVLGMAFVLVWRMRLMGAGDVKYLAVLGLAIGA FT CPWLLVLVLVLAGLPSLAHALAQGFQVVRDPRKPRRGIPYAAYLALAAISLGLMPSSSP FT WCSWCSSWFFTAV" FT misc_feature join(100148..100204,100223..100282,100310..100366, FT 100400..100468,100544..100612) FT /note="5 probable transmembrane helices predicted for FT BPP2372 by TMHMM2.0 at aa 10-28, 35-54, 64-82, 94-116 and FT 142-164" FT CDS 100612..101055 FT /transl_table=11 FT /locus_tag="BPP2373" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1993" FT /db_xref="InterPro:IPR012495" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y6" FT /protein_id="CAE37670.1" FT /translation="MFVVFFVVLYGGLTWAFIFAAQQSLNHAAEEGARAALQWPGSTAL FT EPRAARAGQLAGQYADWGRRMGGAPATVTVCGSGGPIGGLAGGPCSGIALAADQIEVLV FT RYPYAQAPLVPLLPGMGVAVPGTLSARASVRVGGPVTAAGEGA" FT CDS 101057..101533 FT /transl_table=11 FT /locus_tag="BPP2374" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1994" FT /db_xref="InterPro:IPR012495" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y5" FT /protein_id="CAE37671.1" FT /translation="MRAISFPSRRRAQRGAAAVEFALVILLMLALMLGVLGYGALFWAQ FT QKLSKAAGEGAQALLQANLRGAAASGVAGCEAARQEAGWLAIECVSETLDCAWTASDGG FT PAACAQVRVRYELAGWPLLATLRGAAGAVPGARAWFPDVLGAQAIVQIAQEPTT" FT misc_feature 101057..101167 FT /note="Signal peptide predicted for BPP2374 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.894) with cleavage site FT probability 0.480 between residues 37 and 38" FT CDS 101530..102471 FT /transl_table=11 FT /locus_tag="BPP2375" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1995" FT /db_xref="InterPro:IPR013974" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y4" FT /protein_id="CAE37672.1" FT /translation="MSTVAKIAAAVLALVALGLGYAAFMLATRPAPPPPKPVAQRASAA FT LPTYPVVVAGKPIAAGDRLAAELLKIERWPVQPANGYAESEALLGQMVRQDIPAGEPVT FT APMLARGLARHLAPGERAVTIAVDELSGAQNRILPGDLVDVFVVMDRGIEVPGTQTRLL FT QSRIKVLAYGQRSVDGPPQGEEKPSVAQRGQPPAAPRNAMLAVPVERVNELLLAAKAGR FT LQLVLRSPEDVDVPDLALFPERAPVLALRAGLTAEQQRDGKDGMNQAYAGEILPQLAGP FT TAAPVPKPRAAGGGGGRSIEVVRGGDVQAVRY" FT misc_feature 101530..101595 FT /note="Signal peptide predicted for BPP2375 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.993) with cleavage site FT probability 0.341 between residues 22 and 23" FT misc_feature 101680..101856 FT /note="HMMPfam hit to PF01354, Antifreeze-like domain, FT score 0.059" FT CDS 102527..103873 FT /transl_table=11 FT /locus_tag="BPP2376" FT /product="putative type II secretion system protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1996" FT /db_xref="GOA:Q7W7Y3" FT /db_xref="InterPro:IPR001775" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y3" FT /protein_id="CAE37673.1" FT /translation="MKQHKVGRHWAGWAMALACLGAAAPLAAQPAAAGAAQARELLLEV FT KGQQPLRLDAAPSRVAIADPQVADVKVLAPGVGRPGEVLLIGRQAGTTELRVWSRGSRD FT PQVWTVRVLPQVQAALARRGVGGGAQVDMAGDSGVVTGMAPSAEAHRGAAEAAAAAAGG FT NDKVVDMSQINTSGVVQVEVKVVELARSVMKDVGINFRADSGPWSGGVSLLPDLASGGM FT FGMLSYTSRDFSASLALLQNNGMARVLAEPTLLAMSGQSASFLAGGEIPIPVSAGLGTT FT SVQFKPFGIGLTVTPTVISRERIALKVAPEASELDYANGISSIDSNNRITVIPALRTRK FT ADTMVELGDGETFVISGLVSRQTKASVNKVPLLGDLPIIGAFFRNVQYSQEDRELVIVV FT TPRLVRPIARGVTLPLPGARQEVSDAGFNAWGYYLLGPMSGQQMPGFSQ" FT misc_feature 102527..102625 FT /note="Signal peptide predicted for BPP2376 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.367 between residues 33 and 34" FT misc_feature 102551..102583 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 102911..103741 FT /note="HMMPfam hit to PF00263, Bacterial type II and III FT secretion system protein, score 4.4e-63" FT CDS 103870..105219 FT /transl_table=11 FT /locus_tag="BPP2377" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1997" FT /db_xref="GOA:Q7W7Y2" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y2" FT /protein_id="CAE37674.1" FT /translation="MTNMKTHAREWAALDKSACFLFCSGDNDVAQQLGHAIGDLGLLMQ FT ELPEPEQLARRLADIDPQVVFLDFTGGQADPGKLLLAADLARVLARVAPAVPRVAVGYL FT AQPDGAIAALRAGVSDFVDPSVSPDEVHGVVQRLVSNRRVSGGSGGEHRSVLILGARPG FT VGASTLAVHMAGLTQERMAQAALARQGAVAGKPARSAEVMAAQLPLSDRVGVLDLGWPI FT GDCLLYLNISSDFDFAEAARNLSRLDGTLLNSAMAHTASGVSALALPREVEQVRALSPN FT DSLLLFERLRQHYGTLVTDAGGLANPEFVAKLARASHETWLVTDQSVSALVSLAGAVQE FT LEQFHVEKSALRLVVNRYDERYGMSAAQIAERFGLELAGTLPDRTLPLMVCTNQGRLLH FT EQAERDIYVRAVQTLVDRLLAGSEAPRARHNSWLANWLPGVHRLTNVVES" FT CDS 105228..106583 FT /transl_table=11 FT /locus_tag="BPP2378" FT /product="probable type II secretion system protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1998" FT /db_xref="GOA:Q7W7Y1" FT /db_xref="InterPro:IPR001482" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y1" FT /protein_id="CAE37675.1" FT /translation="MIMPPSMEFGAAGGGEFIASERFQDVKNQAYEHLLSRIEELGAEF FT GRWTRAAIQEFVDIEVASFVRLRRVAINEGELGQVAAALTKELAGLGPLEDLLSDHDVE FT DILINGSDNVFVSRRGVLARETVRFSDNQHVLRIVRRILAPLGRRLDESSPMVDARLPD FT GGRLNVVIEPLSVDGPMVSIRKFRQDPLKPNDLLTLGSFNEDIFRLLNAAVKGRCNILV FT SGGTSSGKTSLLNALAFFIPETERVVTVEDTAELSLNHPHVVRLEARQGGFDGAGAVSI FT RDLIRNSLRMRPDRVVVGEVRGAEVMDMLQAMNTGHEGSMATIHANSPRECLYRIEMLA FT GFAGFQGSEDSLRRQIASALDFIVQIGRLPNGKRRVISITEVTGMGDAVIATQELYRYE FT AYATPDGEEKDNWVSLGILPHTPKLARMRNELRGAAPDSEPEGGGGFWGRRR" FT misc_feature 105255..105305 FT /note="PS00237 G-protein coupled receptors signature." FT misc_feature 105561..106295 FT /note="HMMPfam hit to PF00437, Type II/IV secretion system FT protein, score 2.4e-08" FT misc_feature 105897..105920 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 106580..107500 FT /transl_table=11 FT /locus_tag="BPP2379" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1999" FT /db_xref="InterPro:IPR018076" FT /db_xref="UniProtKB/TrEMBL:Q7W7Y0" FT /protein_id="CAE37676.1" FT /translation="MSLMAWLLGALALALLAAAALLLRQARDGARRQASEAFLERQLEL FT RPGQPEASQAPAARRRLPISNGAWRQLLLRAGVEPTPRFLAASVGAHVGVPALAWLFGG FT WISAAAALLLVALLWYFHLWLKADRRRMVHQLPTFLDALVRLITIGNSVNAAFQNALGS FT VEQPLLEVLQRADSQVRSGKDLDAALHQVSRQYQLRELFLVSAVIALALRFGGRSDQVL FT ERMAAFMRDLEQARDELTALSAEVRLSAWILALLPIGLALFIIIFNNQLFMGMWHDPMG FT FRLLVFAMLLQAGGSYWLYRMARSV" FT misc_feature 106580..106636 FT /note="Signal peptide predicted for BPP2379 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.680 between residues 19 and 20" FT misc_feature join(106589..106648,106829..106885,106895..106954, FT 107321..107380,107423..107479) FT /note="5 probable transmembrane helices predicted for FT BPP2379 by TMHMM2.0 at aa 4-23, 84-102, 106-125, 248-267 FT and 282-300" FT CDS 107509..108495 FT /transl_table=11 FT /locus_tag="BPP2380" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2000" FT /db_xref="InterPro:IPR018076" FT /db_xref="UniProtKB/TrEMBL:Q7W7X9" FT /protein_id="CAE37677.1" FT /translation="MDRLLADSQTRMLLVAALPVLMVVCAVVGVALVARAGRQQRSRAV FT VDRALAARDGHVAEPPPAGRMAAVASAAEHAGAKLEHGKLGDSLLAIDDRKLIDACGFR FT NPARARAWFMLARLLLAGLAPLAAWLVLRARHAEMPLAYVACAVFLGFGLGWMVPKWML FT LRRIARRRECAEAELPLFIDLLRLLQGVGLSVDQSMHVLIQDFRSVMPVLGGELKIAAE FT QYARGRTREQSLSRLAQGFDNDDLSAICRLIVQVDRHGGAVQDPLARFAERVRERRRLE FT LKARVARLTVKMTGVMVVTLLPALLIITGGSGFVALLRGMSQVMGEG" FT misc_feature 107509..107616 FT /note="Signal peptide predicted for BPP2380 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.871) with cleavage site FT probability 0.530 between residues 36 and 37" FT misc_feature join(107551..107610,107845..107904,107932..108000, FT 108391..108459) FT /note="4 probable transmembrane helices predicted for FT BPP2380 by TMHMM2.0 at aa 15-34, 113-132, 142-164 and FT 295-317" FT CDS 108495..109340 FT /transl_table=11 FT /locus_tag="BPP2381" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2001" FT /db_xref="GOA:Q7W7X8" FT /db_xref="InterPro:IPR013105" FT /db_xref="UniProtKB/TrEMBL:Q7W7X8" FT /protein_id="CAE37678.1" FT /translation="MKRSHRLGLALAAAAPLLLGGCQTSNVDTAMQLMQQQQQEQALAQ FT QREDADERKRLAAKPELALSLIREAQREGRYFASLAYLDAYRQNFGDSPQVAVMRADAL FT RMTGQIAQSESAYRALTGTDQAAAVAWHGLGLLAGGRGDFDQAADYLARATRLRPTDAN FT MLNDLGYALLRAGDPRGARLPLGQAAELAPANAKVLGNLVLLLLVEGDYAGARQVMDRA FT ALSPQARQRVQELASQTRHAGVSAAAAVPVAQAAGREAMVMPVLQRPVMDRFGNPPLLQ FT " FT misc_feature 108495..108575 FT /note="Signal peptide predicted for BPP2381 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.449 between residues 27 and 28" FT misc_feature 108528..108560 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 108876..108977 FT /note="HMMPfam hit to PF00515, TPR Domain, score 0.00035" FT misc_feature 108978..109079 FT /note="HMMPfam hit to PF00515, TPR Domain, score 2.3" FT CDS 109359..109772 FT /transl_table=11 FT /locus_tag="BPP2382" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2002" FT /db_xref="UniProtKB/TrEMBL:Q7W7X7" FT /protein_id="CAE37679.1" FT /translation="MTTHDLPRFLLCAALAGLAAGAAAQTHPPLTAAPAAPAPASASPA FT PAAERPVVRQVAAPAAPAAAAPAPDDGAVGAVTRGLLAAQADGRRAGPGLPLQGPVASA FT AWQRYLESFSQPVPQWFGERIEDNVGGSGGGGG" FT misc_feature 109359..109430 FT /note="Signal peptide predicted for BPP2382 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.474 between residues 24 and 25" FT CDS 109780..112029 FT /transl_table=11 FT /locus_tag="BPP2383" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2003" FT /db_xref="InterPro:IPR018705" FT /db_xref="UniProtKB/TrEMBL:Q7W7X6" FT /protein_id="CAE37680.1" FT /translation="MSMNVPRPLRARRRQRGSILIPAALAILIGVALLGAAQLGYFFYM FT KRELQKTADLAALTGVQVLSPGDEAACAAAGQAVRASVRANLGSRADEGLSIEPTCWRW FT ARDEAELAPRYVREPADASERYNAVAVVLGMPVRALFPFLGGRTLEVEAIAARPADPIA FT AFSVGTGLLATGSGELTRLLKQVGLDIGGTAVLGYDSGLAGVKITPAGLLKELGITVPA FT DISVADFNQLLSANVSALDGVLDAVVRAASRDSLLDANVGLVQAIETAVGVKDLAVRLG FT SETAERASGLFANIQAPDAASALNVELDALEVLATAIGVGTSGHAIACGVAVPLLMSGP FT ARCSVVEPPSIAIGGVGATAYTSQIRVHAPLRLDTGSLLGGLVRLDLDIPLTVDVVNGH FT GTIEALCHARDAAGRDLAVVSTRSSLLKICLGGPPAGLTGPELANWPFSTTASCDENLT FT RKRLLGLELNLLGKRVNLASLNPDPPLVVPALQTTSEDDYYAGQRRSLGNELALGDTVK FT DLVDALLAALIGNSLQGGAGLGGGDQGELRKDLAGKIWADTAAEVAACTPGASGKAGYD FT CRRARWSRGIENIENYSNGLTGFLGGLSANTLGLLGNLVTLDVVGLLGNVVGLVGNLVD FT LLGDILGGILGVLFPTNQCATWSLLGGYQGSEAGCVNELGKALANSTPPSGGNPPNAIV FT VLLGYLLKPLADILNMIGADLLRPLIENVLGLRLGVTDVHMMSIDCDGKGVQLVY" FT misc_feature 109780..109884 FT /note="Signal peptide predicted for BPP2383 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.461 between residues 35 and 36" FT CDS 112051..113442 FT /transl_table=11 FT /locus_tag="BPP2384" FT /product="putative response regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2004" FT /db_xref="GOA:Q7W7X5" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/TrEMBL:Q7W7X5" FT /protein_id="CAE37681.1" FT /translation="MSDQAPACDAVDVYVWEGTSDIAFRAERALAGYEATVIHVDNSVA FT LPPSRDAARPAVGLVSVSVMGDARFAGFDWLATQGIPVIWVAGEERNHDPRYYAPAYSY FT TLPLAFTGAELRRLLFRLAGVARAAAVDEPRPAPAMIAVSPAMRGLLAEAEMFADARAN FT VLVHGETGVGKERIARLLHDQSSWAGGPFVAVNCGAIPEGLFEAHFFGHAKGAFTGAVG FT AHKGYFEQASGGTLFLDEIGDLPSYQQVKLLRVLEQSSVTRLGSTVAIPVEFRLVAATN FT KDLRALVAQGEFRADLYYRLAVIELHIPNLEARGGAEKTAIFAALLRQQGIEDEPPAWL FT LQRVAAARYPGNVRELSNLAERVAILRRQLRAWDQPRIEQVFERHAQATPLAPATPGDA FT DAPAFNAAERAERERVLAALEANGWRRQDTAHHLGISRKVLWEKMRKLRLGEAQAETAD FT GVADP" FT misc_feature 112468..113121 FT /note="HMMPfam hit to PF00158, Sigma-54 interaction domain, FT score 2.5e-92" FT misc_feature 112540..112581 FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT misc_feature 112726..112773 FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT misc_feature 113095..113124 FT /note="PS00688 Sigma-54 interaction domain C-terminal part FT signature." FT misc_feature 113269..113391 FT /note="HMMPfam hit to PF02954, Bacterial regulatory FT protein, Fis family, score 3.4e-10" FT CDS 113522..114217 FT /transl_table=11 FT /locus_tag="BPP2385" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2005" FT /db_xref="UniProtKB/TrEMBL:Q7W7X4" FT /protein_id="CAE37682.1" FT /translation="MKIRYLGAGARLTVAGLALSSLAACASAQSESRPVVQQVEEKQAA FT AAPVEPPAPAPAARPASTVSELQGLIQARQVSELRTTYNGSYGASLLYKPDELTYYVAL FT FQQKDFWRVLKTKSVNQAESTYRAFASKTAELAEVDIQRIRLQAEYAHAEKQLGARNAE FT LTALQADQALRQQQEQQVAVRQAQSRQEADSLSEQRQEVRSQLRAMQRQIDALQAEQAR FT VAAPARRGK" FT misc_feature 113522..113611 FT /note="Signal peptide predicted for BPP2385 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.458 between residues 30 and 31" FT misc_feature 113564..113596 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 114290..114772 FT /transl_table=11 FT /locus_tag="BPP2386" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2006" FT /db_xref="InterPro:IPR009562" FT /db_xref="UniProtKB/TrEMBL:Q7W7X3" FT /protein_id="CAE37683.1" FT /translation="MPVRPHIDAMALKVFDLQCEQGHVFEGWFGSHEDYDAQQARGQIA FT CPVCESSRITKRLSAPRLNVAHLHQPAAAPAPAPQSEAARMARLQAAVLRQVRELVRNT FT ENVGARFAQEARRIHEGEADERPICGTATPQERAELADDGIDVVSLPAFLDDERMQ" FT CDS 114830..115534 FT /transl_table=11 FT /locus_tag="BPP2387" FT /product="putative ECF-family RNA polymerase sigma factor" FT /note="ortholog of Bordetella pertussis (BX470248) BP2007" FT /db_xref="GOA:Q7W7X2" FT /db_xref="HSSP:1OR7" FT /db_xref="InterPro:IPR007627" FT /db_xref="UniProtKB/TrEMBL:Q7W7X2" FT /protein_id="CAE37684.1" FT /translation="MHPSPLQSQAPAPELAADAQLAARAAAGEDSAFETIMRRHNRLLF FT RTARSILHSDAEAEDALQEAYLRAWRALGSFRADARLSTWLVRIVINESLGRLRRGQAQ FT VIPLDAAMESTDPQNQEWLHDAIDQQPDRQAMRAEIRRLMEARIDLLPDAFRSVFVLRA FT VEELSVEEVAQALDIPEATVRTRFFRARGLLREGLSRDVDMAIGDAFSFDGQRCDRIVA FT AVLARRGERAGA" FT misc_feature 114965..115132 FT /note="HMMPfam hit to PF00776, Sigma-70 factor (ECF FT subfamily), score 8.9e-11" FT CDS 115681..116250 FT /transl_table=11 FT /locus_tag="BPP2388" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2008" FT /db_xref="GOA:Q7W7X1" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:Q7W7X1" FT /protein_id="CAE37685.1" FT /translation="MSFLQISSPCAARRRFLGHGGLVLSAAAVALLAGKDARAAQAGSG FT SSQDVQILNTALAAELEAIAAYQLGAESKLLDKPVLALALTFQGHHKEHADVLGKTVEK FT LGGQPVAAKRNYAFPTSQLKSQADVLRFAAKLEQGAVSAYLGAVPLFANRDLSKAAASI FT LGDEAIHWAVLRQALGEPPVPSAFVS" FT misc_feature 115681..115806 FT /note="Signal peptide predicted for BPP2388 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.938) with cleavage site FT probability 0.820 between residues 42 and 43" FT CDS 116247..116657 FT /transl_table=11 FT /locus_tag="BPP2389" FT /product="putative cytochrome c" FT /note="ortholog of Bordetella pertussis (BX470248) BP2009" FT /db_xref="GOA:Q7W7X0" FT /db_xref="HSSP:1I6D" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:Q7W7X0" FT /protein_id="CAE37686.1" FT /translation="MNAGLAWRAGALCLALAASAAARAAAPDPVRGEQVYARCLACHAL FT AYDRVGPRHCGLLGRKAGSVPGFAYTQAMEDSGLTWDATTLDRFLADPLKTVPGTAMTY FT AGVPDAGERADLIAYLRAAAASPACAGVATPH" FT misc_feature 116247..116318 FT /note="Signal peptide predicted for BPP2389 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.819 between residues 24 and 25" FT misc_feature 116325..116618 FT /note="HMMPfam hit to PF00034, Cytochrome c, score 3.8e-20" FT misc_feature 116361..116378 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS complement(116824..117381) FT /transl_table=11 FT /gene="efp" FT /locus_tag="BPP2390" FT /product="putative elongation factor P" FT /note="ortholog of Bordetella pertussis (BX470248) BP2010" FT /db_xref="GOA:Q7W7W9" FT /db_xref="InterPro:IPR014722" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7W9" FT /protein_id="CAE37687.1" FT /translation="MKTAQELRVGNVIMVGKDPLVVQKTEYNKSGRNAAVVKLKFKNLL FT TGSGSESVYKADEKFDVVVLERKECTYSYFGDPMYVFMDEEYNQYEIEADSMGDALNYL FT EEAMPVEVVFYDGRAISVELPTILVREITYTEPAVRGDTSGKVLKPAKINTGFELSVPL FT FCAIGDKIEIDTRTNEYRSRVN" FT misc_feature complement(116830..117381) FT /note="HMMPfam hit to PF01132, Elongation factor P (EF-P), FT score 3.4e-61" FT CDS complement(117524..118636) FT /transl_table=11 FT /locus_tag="BPP2391" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2011" FT /db_xref="InterPro:IPR000834" FT /db_xref="UniProtKB/TrEMBL:Q7W7W8" FT /protein_id="CAE37688.1" FT /translation="MRADIFCRLIDNLGDIGVCWRLARRLAHGRRWQVRLWVDDLAAFA FT RIQPGIVPDRDQQVCDTIEILRWDDRAEWPQTPGDVVIEAFACDPPPAYVAAMRQVQPV FT WINLEYLSAEAWVETCHGLPSQRADGLVKHFFFPGFSAATGGLIREPGLSRDRDALQTS FT RAQQRTLLRALGLDEAALARRDDGARLVNLFCYPDAPYQALAHALMQDARPTLLLVPQG FT VAPGLPEPGQHGQLTLARVPYVSQPDFDRLLWCADLNCVRGEDSFVRAAWAARPLLWQI FT YAQAENAHLEKLQAWLARYPAPAAAHALMRAWNQAPGAPAPQQALAGALAEPAWGEWNQ FT AARAWDAAQAARPDLGDALADFCAELAKTS" FT misc_feature complement(117908..117940) FT /note="PS00133 Zinc carboxypeptidases, zinc-binding region FT 2 signature." FT CDS complement(118652..119854) FT /transl_table=11 FT /locus_tag="BPP2392" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2012" FT /db_xref="UniProtKB/TrEMBL:Q7W7W7" FT /protein_id="CAE37689.1" FT /translation="MARTRSQSSPRLNRDASRLVALAHALDRSGSKVEDLYWEAQLAEA FT ITKLLRSGHDAPLESALDNLAQTDPGAYEVLIEQSETLSESMQIEKNGTRHDVVLLVAP FT VVAWTRYTIPTGPIPAPAQQALLAQLHGHILADGVRVALMPHLVSIDQMPRTFAETWQW FT LHRLGTQALGAETAKPALNDDVETANMLADTRYVVAAVAVPERAPVFRWQERWDDPQAS FT RDACLAQWVEQAQPTLAALLPGCGIECLLPDAYYVSNREADRRVRPLSLRAAIAWLESA FT VSLEPSQMRAVVAGCGEARIDEYRIGFTARNSNDVYYGCVWPLYGREDDIPADEGQPDA FT VDEIAALLKEYGVSDVRRIPGVLPPEYCEDCGAPHFPNPLGELVHAELPEDAEAVPAKF FT H" FT CDS 119961..120800 FT /transl_table=11 FT /locus_tag="BPP2393" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2013" FT /db_xref="GOA:Q7W7W6" FT /db_xref="InterPro:IPR014436" FT /db_xref="UniProtKB/TrEMBL:Q7W7W6" FT /protein_id="CAE37690.1" FT /translation="MGFIAGLKIPTISHPYLPEVAMRLPTLFVSHGSPMLAVEPGRTGP FT ALAAWSDGLPERPRAVLVVSPHWMGQGLAVSTRDRQVAWHDFGGFPADLYQLQYPAEGS FT PRLAQQVVDVLAHAGIQAGNDARRPLDHGAWVPLRYLCPHADLPVVQLSLDMERDARGQ FT YALGQALAPLRDDGVLVIGSGSLTHNLRDVRMPHAAPPEDYVAPFQQWYAEHLAAGDVE FT ALLDWQARAPGAARAHPHDDHLMPLYVALGAGGMPARRLNDEVAYGALAMDAYQFGA" FT CDS complement(120909..123614) FT /transl_table=11 FT /gene="acnA" FT /locus_tag="BPP2394" FT /product="putative aconitate hydratase" FT /EC_number="4.2.1.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP2014" FT /db_xref="GOA:Q7W7W5" FT /db_xref="InterPro:IPR018136" FT /db_xref="UniProtKB/TrEMBL:Q7W7W5" FT /protein_id="CAE37691.1" FT /translation="MPHNTFDTLKTFKIGKKTCQLYSLPALGKALGVDVQRLPVSIRIV FT LESVLRNCDGAKVTQEHVRQLANWQANAKREDEIPFVVARVVLQDFTGVPLLADIAAMR FT SVAAKMGKDPKRIEPLVPVDLVVDHSVMIDYFGTKNALDLNMKLEFQRNRERYQFMKWG FT MQAFDTFGVVPPGFGIVHQVNLEYLARGVHRDKNNDVYYPDSLVGTDSHTTMINGIGVV FT GWGVGGIEAEAGMLGQPVYFLTPDVVGVELKGKLRGGVTATDLVLTITEMLRREKVVGK FT FVEFCGEGTASLSVTDRATIGNMAPEYGATMGFFPVDERTIDYFEGTGRTAEEIAALEA FT YFKAQKMFGVPKAKDINYTKLLTLDLGTVAPSLAGPKRPQDRIEIGNVKNTFTELFSKP FT IAENGFNQPADKLHQTYTTSAGTKVKNGDILIAAITSCTNTSNPSVLLAAGLLAKKAVE FT AGLKVPKHIKTSLAPGSRVVTEYLTKTGLLPYLEKLGFDVAAYGCTTCIGNAGDLTADL FT NEAILGNDLVCSAVLSGNRNFEARIHPNIKANFLASPPLVVAYALAGTVTRDLMTEPVG FT RGKNGDVWLGDIWPSSEEIQALLKFAMNPTAFKENYSQVKSNPGKLWENIKGVTGETYN FT WPESTYIAEPPFFEGFGMTPAAMPAVKGARALGIFGDSVTTDHISPAGSIKETSPAGKW FT LKENGVMKADFNSYGSRRGNHEIMMRGTFANVRIKNLMIPARPDGSRFEGGETLFQPTG FT EQMSIYDAAMKYVAQGTSSVVFGGEEYGTGSSRDWAAKGTQLLGVKAVIARSFERIHRS FT NLVGMGVLPLQFKGGDSAQSLGIVGNETFDVTGLEGGIKPMQDVTLTIHRADGSRQDVT FT VLLRIDTPIEVDYYQHGGILPFVLRQLLAA" FT misc_feature complement(121005..121544) FT /note="HMMPfam hit to PF00694, Aconitase C-terminal domain, FT score 5.5e-58" FT misc_feature complement(121923..123446) FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase), score 1.1e-209" FT misc_feature complement(122091..122132) FT /note="PS01244 Aconitase family signature 2." FT misc_feature complement(122280..122330) FT /note="PS00450 Aconitase family signature 1." FT CDS complement(123852..124454) FT /transl_table=11 FT /locus_tag="BPP2395" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2015" FT /db_xref="UniProtKB/TrEMBL:Q7W7W4" FT /protein_id="CAE37692.1" FT /translation="MFGRWILLPTLLALAGCASTRPPADPENICAIFREKPSWHDAALD FT VQKKWGAPVNVPIAMMYQESSFRHDALPPRYYFLGFIPWGRVSSAYGYAQAKDETWADY FT KREAGGWLASRDNFSDALDFMGWYMSKTQRINGVSKWDAYGQYLNYHEGWTGYRNRSYD FT RKAWLKRVAQQVQARAERFGAQYKGCERELNRGGWLF" FT misc_feature complement(124395..124454) FT /note="Signal peptide predicted for BPP2395 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.972) with cleavage site FT probability 0.485 between residues 20 and 21" FT misc_feature complement(124404..124436) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 124731..126935 FT /transl_table=11 FT /gene="brfB" FT /locus_tag="BPP2396" FT /product="putative ferric siderophore receptor" FT /note="ortholog of Bordetella pertussis (BX470248) BP2016" FT /db_xref="GOA:Q7W7W3" FT /db_xref="HSSP:1UJW" FT /db_xref="InterPro:IPR010917" FT /db_xref="UniProtKB/TrEMBL:Q7W7W3" FT /protein_id="CAE37693.1" FT /translation="MKPLPLAYLAVLLPWYAGVIQAQAAPAAGGDASITLDAVRVEASA FT DASAGGLAPAFAGGQVATGAKVGILGTRDNLETPFSITAYTNELIQDRQAKGVGDVLQN FT DPGVRVARGFGNFQESYFIRGFILSSDDIAYNGLYGLLPRQYISTQLFERVEVLRGASA FT FLTGAPPSGGGIGGVINLVPKRAPNEPLTRFSAGYGSDSMLEASADIGRRFGPDDSVGI FT RINAAQRGGETAIDGERTRTTVFALGLDWRGERARLSADIGYQDNRLKRARPNVTLAGD FT AAKVPGAPDAGSNYAQPWSYSNERDVFGTLRGEYDFNDRITGWAAYGMRQSKEENSLAN FT LNGVNGAGQGKFYRFDNAREDTVNTGEIGLRAKARTGPVGHELVASASYFDLEKKNAYV FT MDFFNQFDTSIYDPVSYAKPAISSTAFRGNDMDDPAKQGVIRLASYALGDTMSFFDDKV FT LLTAGIRHQRLYQRDYSYDTGIGGTPYEQSHNSPAAGLVVRVTPQVSLYANYIEALSAG FT DTAPQTANGLPVVNHGESLAPYVSKQKEVGVKFEHDGLGGGLALFSTDKPRGFVGDDQV FT FRASGKDRHRGVELTTYGELTRSVRVLGGLTWLDAKQLSTGNAATDGKRVIGVPRFQAN FT LGVEWDIPGVQGLTVDGRVVYTGSSYADAANTLEVPGWTRLDAGLRYMTDIGGHLVTWR FT ARVENIANRDYWSSVGGYPGNGYLVLGGPRTFTLSASMEF" FT misc_feature 124731..124802 FT /note="Signal peptide predicted for BPP2396 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.992) with cleavage site FT probability 0.517 between residues 24 and 25" FT misc_feature 126600..126929 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00593, TonB dependent receptor FT C-terminal region, score 9.8e-32" FT misc_feature 126879..126929 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="PS01156 TonB-dependent receptor proteins signature FT 2." FT CDS 127097..127720 FT /transl_table=11 FT /locus_tag="BPP2397" FT /product="putative haloacid-type dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2017" FT /db_xref="GOA:Q7W7W2" FT /db_xref="InterPro:IPR005833" FT /db_xref="UniProtKB/TrEMBL:Q7W7W2" FT /protein_id="CAE37694.1" FT /translation="MEPARATDIEVLFFDVLGTVVDWRGSIADEVAAFLKRHALPHVDA FT HQFADAWVGQYDAAIEPIRAGQRAFAPLDIINMENLQACLAQFDLTPSRFARSELETLN FT HAWHKLRPWPDSVAGIAQLKQRFIVAPLSDGHTRLLVDMARHAGLSWDMVFGADASRSY FT KPAPQAYLHACALLDVPPQRAMLVAAHGYDLDAARSCGLKTAYV" FT misc_feature 127121..127714 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase, score 0.00083" FT CDS complement(127840..128442) FT /transl_table=11 FT /locus_tag="BPP2398" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2019" FT /db_xref="GOA:Q7W7W1" FT /db_xref="HSSP:1OAP" FT /db_xref="InterPro:IPR006665" FT /db_xref="UniProtKB/TrEMBL:Q7W7W1" FT /protein_id="CAE37695.1" FT /translation="MATHPAGPTLLAALALLAASSGSMAQEPPYKSTILGLQATILDLK FT GLPSDTDGDISDLSAQVGALAARHEGVSVRQGKDAVTIAMMGDVLFDFDKADILAAAEP FT TLQDIAKLIKSPATGIVAIEGHTDSKGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKLSV FT RGLGAARPVQPNQLANGADNPQGRAQNRRVEFVLPHR" FT misc_feature complement(127870..128175) FT /note="HMMPfam hit to PF00691, OmpA family, score 2.8e-29" FT misc_feature complement(128368..128442) FT /note="Signal peptide predicted for BPP2398 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 25 and 26" FT CDS complement(128444..128782) FT /transl_table=11 FT /locus_tag="BPP2399" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2020" FT /db_xref="UniProtKB/TrEMBL:Q7W7W0" FT /protein_id="CAE37696.1" FT /translation="MINAVRSGEILSIKIRFKPVVMGKTETIYSQISKSDYENSFYVIA FT GNKKHLLLKDSNDVPLTNPKVLIRTSSDAPIAGSWQGKFPAPPKEIKEVSLTIPGVETF FT DAIQITDR" FT CDS complement(129177..131768) FT /transl_table=11 FT /gene="acnB" FT /locus_tag="BPP2400" FT /product="putative aconitate hydratase" FT /EC_number="4.2.1.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP2021" FT /db_xref="GOA:Q7W7V9" FT /db_xref="InterPro:IPR018136" FT /db_xref="UniProtKB/TrEMBL:Q7W7V9" FT /protein_id="CAE37697.1" FT /translation="MLETYRQHVADRAALGIPPLPLSAQQTADLIELLKNPPDGEAQNL FT LELLTYRVPAGVDDAAKVKASYLAAVAFGTESCALIDRAKATELLGTMLGGYNIGPLVQ FT LLDDAEVGTIAADALKKTLLMFDAFHDVKEKADKGNANAKSVLQSWADAEWFTSRPEVP FT QSLTVTVFKVPGETNTDDLSPAPDATTRPDIPMHALAMLKNKRDGAAFEPEEDGKRGPV FT QFIESLKEKGHLVAYVGDVVGTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGSKIA FT PIFYNTMEDAGALPIELDVSKMEMGDVVELRPYDGKAIKNGETIAEFTVKSDVLFDEVR FT AGGRIPLIIGRGLTAKAREALGLPPSTLFRLPNNPADTGKGYTLAQKMVGRACGLPEGQ FT GIRPGTYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVK FT THHTLPQFISTRGGISLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGL FT VAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVNAIPLYAIKQGLLTVAKQGKKNI FT FSGRILEIEGLPDLKVEQAFELSDASAERSAAGCSVRLHKEPIIEYINSNIVMLKWMIA FT NGYEDERSLGRRIKAMEAWLADPKLLEPDADADYAAVIEIDLADIHEPIVACPNDPDDV FT KTLSDVAGAKIDEVFIGSCMTNIGHFRAASKLLEGKRDIPVKLWVAPPTKMDAQQLTEE FT GHYGVFGTAGARTEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLGKNTNVYLGSAEL FT AAICSRLGRIPTREEYMADMGVINKSGDQIYQYLNFDRIPDYKDVADVIEV" FT misc_feature complement(129309..130622) FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase), score 2.4e-07" FT misc_feature complement(129603..129656) FT /note="PS00450 Aconitase family signature 1." FT CDS 131835..132578 FT /transl_table=11 FT /locus_tag="BPP2401" FT /product="putative exonuclease" FT /note="ortholog of Bordetella pertussis (BX470248) BP2022" FT /db_xref="GOA:Q7W7V8" FT /db_xref="InterPro:IPR013520" FT /db_xref="UniProtKB/TrEMBL:Q7W7V8" FT /protein_id="CAE37698.1" FT /translation="MPQMSYILYKTCLAAHRGLSRRRMPVGPAGRCFYCCFGINMAYFR FT RYTTPHPYGQTLRAGAAAGRASAARDGLRALDGPFVVADLETTGLSVATCEILEFAAVR FT VSACGQIEREFTQVVRTDGRVPPFISRLTGITQAEVERDGVPVRQAFGDFLDFIEGGPL FT FFHNASFDRRFLQAAADRTGLPFEAQTHCTLMLARQAWPELPSHKLNVLARHLGASEPT FT HRALADVRTTVAVALAARARLAAQG" FT misc_feature 132072..132566 FT /note="HMMPfam hit to PF00929, Exonuclease, score 8.7e-30" FT CDS 132591..132977 FT /transl_table=11 FT /locus_tag="BPP2402" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2023" FT /db_xref="InterPro:IPR011394" FT /db_xref="UniProtKB/TrEMBL:Q7W7V7" FT /protein_id="CAE37699.1" FT /translation="MAASDTPGASAGEFDAIRDAVRGFAAERQWEPFHSPKNLAMALAG FT EAGELVAVFQWLTEAGSRELTPSQRQAAADEIADVQLYLVALADQLGLDIPAAVAAKMR FT KNALKYPAERFRGSARKYNDESGR" FT CDS complement(132984..133274) FT /transl_table=11 FT /locus_tag="BPP2403" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2024" FT /db_xref="GOA:Q7W7V6" FT /db_xref="InterPro:IPR007138" FT /db_xref="UniProtKB/TrEMBL:Q7W7V6" FT /protein_id="CAE37700.1" FT /translation="MIQEIASILVQPGREADFEAGVAQARPLFMRARGCHGVALHRSIE FT APQRYTLVVDWETVDNHMVDFRQSADSQEWRKLVGECFAEPPQVHHEQKVL" FT CDS 133410..133709 FT /transl_table=11 FT /locus_tag="BPP2404" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2025" FT /db_xref="InterPro:IPR005545" FT /db_xref="UniProtKB/TrEMBL:Q7W7V5" FT /protein_id="CAE37701.1" FT /translation="MHYLLFYDVIPDYPARRAQYRAEHLALARAAAQRGELVLAGALAD FT PIDGAVLLFTGDTPAAAEAFAAADPYVREGLVTHWRVRPWTTVVGEQASQPVPD" FT CDS 133778..134680 FT /transl_table=11 FT /locus_tag="BPP2405" FT /product="putative integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2026" FT /db_xref="GOA:Q7W7V4" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W7V4" FT /protein_id="CAE37702.1" FT /translation="MPLSHLLLALSVVFIWGTNFVVIKWALADFPPFLFAALRFLLSVL FT PWVLLFRRPAVPWSRLAAFGVLLGVGQFGVLYWAMQRDITPGMASLLVQSQVFFTILMS FT MAFTGERMRLWQALALALAVAGYAVVAWYSVADPGAAITLLGVGLVLLAGLSWACANMV FT ARTAGRVNMVGFIAWSSLFAVPPILLISLLAEGPAAIAQAVTHASPAAWTAVLWQAVGN FT TVFGFGAWNWLLARHPATTVAPMALLVPVFGMLASTLLLDESLPGWKLSAAALVLGGLA FT LNLYAGRLDAAARMARAGR" FT misc_feature join(133790..133858,133871..133930,133949..134017, FT 134030..134098,134117..134185,134198..134266, FT 134285..134353,134411..134479,134498..134557, FT 134585..134638) FT /note="10 probable transmembrane helices predicted for FT BPP2405 by TMHMM2.0 at aa 5-27, 32-51, 58-80, 85-107, FT 114-136, 141-163, 170-192, 212-234, 241-260 and 270-287" FT misc_feature 133817..134173 FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 1.9e-15" FT misc_feature 134240..134632 FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 5.7e-14" FT CDS 134684..135454 FT /transl_table=11 FT /locus_tag="BPP2406" FT /product="putative integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2027" FT /db_xref="GOA:Q7W7V3" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:Q7W7V3" FT /protein_id="CAE37703.1" FT /translation="MSILQHVLFLACVALATYAQTMTGFAFGLVLLGLTGLLAVAPLPD FT MANTVSILTLVNALVVIGRARPQVDWTLVRPALVSSLAGVALGVFMLDWISGSAAVLLQ FT WLLGLTILACAIQLVARARPLARVSSRRSFVGFGVVSGVLGGLFSSAGPPMVYHLYRQP FT LPLATIRNSLLILFSCNAMTRLALVGAQGSLHTITFWLSLEAFPVVVALTWLVRRYASA FT RSIHTVKRLVFVLLVAAGLGLLVPASGALWTMWH" FT misc_feature 134684..134740 FT /note="Signal peptide predicted for BPP2406 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.507 between residues 19 and 20" FT misc_feature join(134702..134770,134798..134866,134900..134968, FT 134981..135049,135083..135151,135269..135337, FT 135374..135442) FT /note="7 probable transmembrane helices predicted for FT BPP2406 by TMHMM2.0 at aa 7-29, 39-61, 73-95, 100-122, FT 134-156, 196-218 and 231-253" FT CDS 135840..136289 FT /transl_table=11 FT /locus_tag="BPP2407" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2028" FT /db_xref="UniProtKB/TrEMBL:Q7W7V2" FT /protein_id="CAE37704.1" FT /translation="MKKIATLAALAASAALVGPALAGGSHSSSGVGAYGGSVKGSVESI FT SNGSAAAASQVMGTGFSKQFASGETSGYASMGGAIHRDGVEVWTDTSQYSKTNGFGMTG FT GNAPAQIGDVIVNGAGAFAESNTEAIAKGKFQMFQIGRIGGYGHR" FT misc_feature 135840..135905 FT /note="Signal peptide predicted for BPP2407 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.929 between residues 22 and 23" FT CDS 136345..136908 FT /transl_table=11 FT /locus_tag="BPP2408" FT /product="Putative exported protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q7W7V1" FT /protein_id="CAE37705.1" FT /translation="MKTMLVVLSLSLASFGAAAQTSTSNATSSTSASAGVNAAGNSQGV FT TFNSDNSGSSSLKTVPAVGAAAFYGSFSTDSCMVSGGAGGAVLGFGMNFAVPVEDQNCS FT LRRNFERTMQAAASTKDDSKARKLETAAIDMLCQTDDATRAALSAQGLCSDLTPVAVVP FT SVRRQVPVNAAAARARIDDLYTPG" FT misc_feature 136345..136401 FT /note="Signal peptide predicted for BPP2408 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.684 between residues 19 and 20" FT CDS complement(136922..139342) FT /transl_table=11 FT /locus_tag="BPP2409" FT /product="Putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2029A" FT /note="Similar to Pseudomonas aeruginosa hypothetical FT protein PA1408 SWALL:Q9I3T6 (EMBL:AE004570) (807 aa) fasta FT scores: E(): 5.6e-86, 39.1% id in 803 aa, and to Rhizobium FT meliloti hypothetical transmembrane protein R00938 or FT SMC00028 SWALL:Q92RE2 (EMBL:AL591785) (871 aa) fasta FT scores: E(): 1.3e-49, 30.84% id in 804 aa" FT /db_xref="GOA:Q7W7V0" FT /db_xref="InterPro:IPR006685" FT /db_xref="UniProtKB/TrEMBL:Q7W7V0" FT /protein_id="CAE37706.1" FT /translation="MTMNPSFPSRRLAPRTLLAMLLLALATLFAAMPAGAQPPSPADAD FT AILTQARKQVDDIRKQLDDKADDPQLVKNRSDVLDIQAKADALAETLSPQLASVSARLS FT ELGAVAEGAKEALDVAQQRTQLEKSHRNLDAQIKLARLLSVEAGQTAEQISALRRNQFQ FT VRLGERRDSVVSSDFWTEWRAEIPRDLTRLAALRDELAEAAVQTPAWIWDVLLVGMAAV FT VALRAWIGRVILQLTATKLPPGRLRRSFLALTIVLMWVATPGLIAQLLRMGVSWNASLS FT DSTETLLSNLVATVCFGGYVGGLGQALLSTVRPTWRLPPIPDQVARALGWVPPTLGLLV FT VAIWLAERLPVLLNSSLTSTITLGVVMAAVLGLVLLAALARAERVRRQLALESEDNRAP FT PRPFWLAVLNTTLWSVLCTGLLTLVIGYAAFGTFLIKQAMWTLVVLCSTYLLVVLIDDG FT FSTLLGSNRDSDAGAQLRLRTQAAVLLSGACRVAVMLAAVVLLLSPFGEGPMDLVHRLD FT QVHKGLQIGEVQIRPAALLQALLVLALSLLIVRLLKRWLTTRYLPTTELDPGMQISAAT FT LFGYAGVVTAAALGLSALGLGLERVAWIASALSVGIGFGLQAVVQNFVSGLILLAERPV FT KVGDWVSLDGVEGDILRINVRATEIQMGDRSTVIVPNSEFITKTVRNVTHANPLGLVQI FT RLPMPLSVDAEQVRTLMLEIFEAHGDILDNPAAAVYLDGIEAGHLIFNAKGYVSSPRSA FT YTVRSDLWFRVLKQLAEAGLDMAPPSTMLLREPQAPLAPDAPAAMASAPPQPR" FT misc_feature complement(137015..137620) FT /note="HMMPfam hit to PF00924, Mechanosensitive ion FT channel, score 4.9e-39" FT misc_feature complement(join(137450..137515,137561..137626, FT 137687..137752,137828..137893,137957..138022, FT 138068..138133,138197..138262,138308..138358, FT 138416..138481,138527..138592,138653..138718, FT 139241..139306)) FT /note="12 probable transmembrane helices predicted for FT BPP2409 by TMHMM2.0 at aa 12-34, 208-230, 250-272, 287-309, FT 328-345, 360-382, 403-425, 440-462, 483-505, 530-552, FT 572-594 and 609-631" FT misc_feature complement(139235..139342) FT /note="Signal peptide predicted for BPP2409 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.985 between residues 36 and 37" FT CDS complement(139487..140398) FT /transl_table=11 FT /locus_tag="BPP2410" FT /product="putative LysR-family transcriptional activator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2030" FT /db_xref="GOA:Q7W7U9" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W7U9" FT /protein_id="CAE37707.1" FT /translation="MDVRALRYFVETVRTASFTQAARALFVTQSTVSKMICQLEDEVGT FT PLLIRDGHTARPTDTGRIVYERGLHILGAMRQLDAEVREAVDLQRGELEVGIPPMINLL FT FTPVVKRFRERHPHIRLSLREDTGQAVERLVAAGELEVGATVLPIQDPGPLQATRFGSY FT ALWVIGPPAAAWAGKTALPLTALRDLPLLLPTDDFALTRRLRQACAQAGFAPRIAAQSA FT HWDFLAAMASADLGVALLPEPLVQRLKTRGLSTARLAKAGLQWEIGHIRVRDRYLSHTA FT RAWLEVATEVLGNGQPARKPSR" FT misc_feature complement(139520..140143) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1e-36" FT misc_feature complement(139862..139885) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(140213..140392) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1.8e-23" FT misc_feature complement(140258..140350) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 140624..142141 FT /transl_table=11 FT /locus_tag="BPP2411" FT /product="putative acyl-CoA transferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2031" FT /db_xref="GOA:Q7W7U8" FT /db_xref="InterPro:IPR003702" FT /db_xref="UniProtKB/TrEMBL:Q7W7U8" FT /protein_id="CAE37708.1" FT /translation="MHLERIRHPGLRARLASPQEAARLVHDGMTVGMSGFTRAGDCKSV FT PAALAERAAAEPLRITLLTGASLGHDTDKLLAQAGVLARRMPFQVDTTLRRKINQGEIA FT FVDQHLSETVEQLRAGHIGPIDIAIVEAAAITEDGGIVPTMSVGNSASFVEQARLVIVE FT LNLGVPAAIEGLHDIVIPGARPGRQPLPLVSVDQRIGAPCIAVDPDKIATIVVTNEPDS FT PSNALPPDEETGAIAGHIVGFLRQEVNQGRLSRSLLPLQAGIGTIANAVLHGFGESEFE FT GLTMYSEVLQDSAIELLDQGKLSFASASSITVSLPVYERILGNLEHYRQRIVLRPQEIS FT NAPELVRRLGVIAINTALEFDIYGNVNSTHVGGTHMMNGIGGSGDFARNAHLSIFVTKS FT MARNGDISSVVPMVSHVDHNEHDVDILVTECGLADLRGLAPRERARAIIAHCVHPSYRD FT ALRDYFERACRRGGQTPHLLEEAFSWHQRYNETDTMRLAAPAARRVA" FT misc_feature 140642..142105 FT /note="HMMPfam hit to PF02550, Acetyl-CoA FT hydrolase/transferase, score 1.1e-155" FT CDS complement(142191..143249) FT /transl_table=11 FT /locus_tag="BPP2412" FT /product="putative transmembrane transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2032" FT /db_xref="GOA:Q7W7U7" FT /db_xref="InterPro:IPR002657" FT /db_xref="UniProtKB/TrEMBL:Q7W7U7" FT /protein_id="CAE37709.1" FT /translation="MFFTGPPPARQCRRAPAPAGHASRNHHAMQAIARLSRFVGNTFAI FT WVLLFAALAYYSPEHFKWLGQYIVPLLGLIMFGMGLTLSKDDFREVLHRPRDVLIGVLG FT QFIIMPSLAWLLTAVLDLPPEVAVGVILVGCCPGGTASNVMTFLARGDVALSVAITSVT FT TLLAPIVTPALIYLLASQWIEVSAAAMFWSIVQVVILPIVLGVLAQYLLREKVKVCVDA FT LPLVSVAAIVAIVAAVVAGNQARIATSGLMIFAVVVLHNGLGLLIGYLLGRACGLGVAK FT RKTLSIEVGMQNSGLGVALATAHFSPLAAVPSAIFSVWHNISGPLAATLLRRFKDDEAD FT APAPATSAAAAR" FT misc_feature complement(join(142302..142367,142431..142496, FT 142527..142592,142614..142679,142725..142790, FT 142806..142871,142890..142955,142995..143060, FT 143079..143144)) FT /note="9 probable transmembrane helices predicted for FT BPP2412 by TMHMM2.0 at aa 35-57, 63-85, 98-120, 126-148, FT 153-175, 190-212, 219-241, 251-273 and 294-316" FT misc_feature complement(142503..143045) FT /note="HMMPfam hit to PF01758, Sodium Bile acid symporter FT family, score 1.9e-55" FT CDS complement(143371..144333) FT /transl_table=11 FT /locus_tag="BPP2413" FT /product="putative LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2034" FT /db_xref="GOA:Q7W7U6" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W7U6" FT /protein_id="CAE37710.1" FT /translation="MLTSMSRLPLNVLPVFRVVADLQNLRAAALQLHLTHSAVSQQIRT FT LETQLGFALFDRRARRLVLNPAGQALLRATEPALALLDEGVQAAAAAAAGSGLRLRISV FT LPSLAQLWLLPRMARWHAHHPDIALEIETSQQVVDLHREGFHAALRFGRGPWAGQQSEP FT LFDTPTRMILVAAPATARRLAGADPQRLAHEPLLGEQGLWQAWFQAAGVRATIKPVALF FT NDAGMLAQAAEQNLGLALVRELLAADALAAGRLVRLSPLAIAAEQRQTFHLVYRPELSG FT WPPLQALRQWLHDELALARATLAHEAGTPPRRRRARPAA" FT misc_feature complement(143443..144057) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 5.6e-29" FT misc_feature complement(144127..144306) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2.5e-19" FT misc_feature complement(144172..144264) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT rRNA 145573..147104 FT /note="16S rRNA" FT tRNA 147202..147278 FT /note="tRNA Ile anticodon GAT, Cove score 93.29" FT tRNA 147299..147374 FT /note="tRNA Ala anticodon TGC, Cove score 88.49" FT rRNA 147697..150578 FT /note="23S rRNA" FT rRNA 150753..150867 FT /note="5S rRNA" FT CDS 151382..154129 FT /transl_table=11 FT /gene="vag8" FT /locus_tag="BPP2415" FT /product="autotransporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP2315" FT /db_xref="GOA:Q7W7U5" FT /db_xref="InterPro:IPR003991" FT /db_xref="UniProtKB/TrEMBL:Q7W7U5" FT /protein_id="CAE37711.1" FT /translation="MAGQARRWYGAGGRHPIHFQISAGAALMLGLLDAAGAAAVTAAQR FT IDGGAAFLGDVAIATTKASEHGINVTGRQAEVRVTGGAIRTSGNQAQGVRVGTENAQDN FT TALGASVSLQNLIIETAGTGALGVSVHEPQGGGGTRLSMSGTTVRTRGDDSFALQLSGP FT ASATLHGVALETAGQQAPAVVLWQGAQLNAQGLVVQVDGAGVSAIHAQDAGSFTLSGSD FT ITARGQEVAGIYVQEGMQGTLTGTRVTTQGDTAPALQVEDAGTHVSMNGGALSTSGANS FT PAAWLLAGGSAQFRDTVLSTVGEASHGVDVAAHSEVELAHAQVRAGGQGAHGLVVTRSS FT AMVRAGSLVESTGDGAAALLESGHLTVDGSVVHGHGAAGLEVDGESNVSLLNGARLSSD FT QPAAIRLIDPRSVLNLDIKDRAQLLGDIAAEPQQPDGSPEQARVRVALADGGTWAGRTD FT GAVHTVRLLDRGVWTVTGDSRVAEVKLEGGTLAFAAPAQPKGAFKTLVATQGISGTGTI FT VMNAHLPSGTADVLLAPQGFGDRQVLVVNNTDDGTESGASKVPLIEDEQGHTAFTLGNM FT GGRVDAGARQYELTASEAQADKARTWQLTPTNELSTTATAAVNAMAIAASQRIWQAEMD FT VLLRHMSGLHSSGSPGGFWARGLSQRQRLDTGYGPWQKQTVSGIELGIDRRVAGGATTA FT WSVGMLAGYSETRRDGGAYRAGHVHSAHVGAYVSYLNDSGSYVDGVVKYNRFRHGFDVR FT TTDLKRVDAKHRSHGLGALLRGGRRIDIDGGWYVEPQASVAWFHADGSRYEASNGLRVR FT ADSAHSWVLRAGAEAGRQMRLANGNIVEPYARLGWAQELGADNAVYTNGIRHVTRSRGG FT FAEARVGVGALLGKRHALYADYEYAKGARFEAPWTLQLGYRYSW" FT misc_feature 151382..151498 FT /note="Signal peptide predicted for BPP2415 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.813) with cleavage site FT probability 0.703 between residues 39 and 40" FT misc_feature 152867..154123 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03212, Pertactin, score 9e-247" FT CDS complement(154148..154771) FT /transl_table=11 FT /locus_tag="BPP2416" FT /product="Maf-like protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2314" FT /db_xref="GOA:Q7W7U4" FT /db_xref="InterPro:IPR003697" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7U4" FT /protein_id="CAE37712.1" FT /translation="MSDATLAADPPRLYLASASPRRRELLLQIGLTHTVLRVPAPPGED FT EPQHPGEAACDYVRRTARDKAERGQAWLHSQQLPDLPLLAADTTVIVDGIVLGKPADRA FT DALRMLAALSGREHEVHTAVALCHQGRLREDVSITRVRMRALEQAELQRYCDSGEPYGK FT AGAYGIQGLAGAFVSHIAGSYTGVMGLPLYETAALLRSAGIAVP" FT misc_feature complement(154157..154741) FT /note="HMMPfam hit to PF02545, Maf-like protein, score FT 5e-50" FT CDS complement(154783..155253) FT /transl_table=11 FT /locus_tag="BPP2417" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2313" FT /db_xref="GOA:Q7W7U3" FT /db_xref="HSSP:1VH0" FT /db_xref="InterPro:IPR003742" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7U3" FT /protein_id="CAE37713.1" FT /translation="MKLIVAAVGTRMPGWVETAWDDYAKRLPADCALELREIKPEPRTS FT GKTPAQMMAAEARRIETAQPPGVLRIALDERGRDLTTVALSQQLEKWRAGGRDVAFLVG FT GPDGLDAALKASCEGLLRLSSLTLPHPMVRVLLAEQLYRAWAIMTNHPYHRA" FT misc_feature complement(154792..155253) FT /note="HMMPfam hit to PF02590, Uncharacterized ACR, FT COG1576, score 2.2e-43" FT CDS complement(155265..155651) FT /transl_table=11 FT /locus_tag="BPP2418" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2312" FT /db_xref="InterPro:IPR004394" FT /db_xref="UniProtKB/TrEMBL:Q7W7U2" FT /protein_id="CAE37714.1" FT /translation="MDIQKLQRAIIDALEDVKAQDIKVFNTSELTSLFDRVIIASATSN FT RQTRALTSSVADRGRALKLTGITVEGEDTGEWVVVDLGYIVVHVMQPAIRQYYNLEEIW FT GGKPVRVKLLPESTRPAMPGAGAL" FT misc_feature complement(155337..155642) FT /note="HMMPfam hit to PF02410, Domain of unknown function FT DUF143, score 1e-31" FT CDS complement(155714..156307) FT /transl_table=11 FT /gene="nadD" FT /locus_tag="BPP2419" FT /product="putative nicotinate-nucleotide FT adenylyltransferase" FT /EC_number="2.7.7.18" FT /note="ortholog of Bordetella pertussis (BX470248) BP2311" FT /db_xref="GOA:Q7W7U1" FT /db_xref="HSSP:1KAM" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7U1" FT /protein_id="CAE37715.1" FT /translation="MGVTRIGLLGGSFDPVHVAHIALADTARQFLGLDQVQLIPAANPW FT QRQPLKASAPHRLRMLELAIAGHPALAINPVEIERGGATYTADTVRALPGGPQYFWLLG FT TDQLQNFCTWRDWQDIAARIELAVATRPGASIAPPAELATWLAAHRRQLHELPFAPMAV FT SASDIRQRLAADAATDGLLPEPVAAYIATHHLYR" FT CDS complement(156298..157209) FT /transl_table=11 FT /gene="hemF" FT /locus_tag="BPP2420" FT /product="coproporphyrinogen III oxidase" FT /EC_number="1.3.3.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP2310" FT /db_xref="GOA:Q7W7U0" FT /db_xref="InterPro:IPR018375" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7U0" FT /protein_id="CAE37716.1" FT /translation="MTAVAIPAVRDYLTDLQGRIVAALEQAGGEAFRTDAWQRAEGGGG FT VSRLLEGGQLFERAGVLFSHVKGTRLPPSASAHRPELAGRGWEAMGVSMVLHPRNPYVP FT TTHMNVRMFVAAARPGHAESDVFWFGGGLDLTPYYPFEDDARHFHRACRDALDPHGADY FT YPRYKQWCDEYFFLKHRNETRGIGGIFFDDLNDPGFDASFALTRSVGDSFLPAYLPIVQ FT ARRDMPYGERERDFQAYRRGRYVEFNLVFDRGTLFGLQSGGRTESILLSMPPLAQWRYD FT WQPQAGTPEAALAEFLRPREWV" FT misc_feature complement(156304..157206) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF01218, Coproporphyrinogen III FT oxidase, score 2.1e-178" FT misc_feature complement(156634..156708) FT /note="PS01021 Coproporphyrinogen III oxidase signature." FT CDS complement(157225..158598) FT /transl_table=11 FT /gene="purD" FT /locus_tag="BPP2421" FT /product="phosphoribosylamine--glycine ligase" FT /EC_number="6.3.4.13" FT /note="ortholog of Bordetella pertussis (BX470248) BP2309" FT /db_xref="GOA:Q7W7T9" FT /db_xref="HSSP:1GSO" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/TrEMBL:Q7W7T9" FT /protein_id="CAE37717.1" FT /translation="MPCKRRAFSTGMSGNLQKPRNMKLLVIGSGGREHALAWRLARSPR FT VHKVYVAPGNGGTAQGEQLENVPLSSAEELADFVQREGVSLTVVGPEAPLAAGVVDVFR FT ARGLKIFGPTKAAAQLESSKDYAKAFMVRHAIPTARYETFTDPAQAHAYVDQHGAPIVI FT KADGLAAGKGVVVAMTLDEAHGAIDAMLGDGSLGEAGARVVIEEFLTGEEASFIVMCDG FT RHVLALATSQDHKRLKDGDAGPNTGGMGAYSPAPVVTPELHHRIMREIILPTVQGMARD FT GIPYTGFLYAGLMIAAGDDPDRPIKTLEYNCRMGDPETQPIMMRVKSDLLDAFEHAVDG FT TLDQADIVWDRRTALGVVLAAHNYPATPRTGDVIAGLPAATEDCVVFHAATALDGDATK FT TTGGRVLCVTALGDSVRIARDRAYEAVDAIHFDGRQYRTDIGWRALKPSQQKAPKPTA" FT misc_feature complement(157261..157542) FT /note="HMMPfam hit to PF02843, Phosphoribosylglycinamide FT synthetase, C domain, score 1.8e-44" FT misc_feature complement(157552..157983) FT /note="HMMPfam hit to PF01071, Phosphoribosylglycinamide FT synthetase, ATP-grasp (A) domain, score 2.3e-78" FT misc_feature complement(157984..158232) FT /note="HMMPfam hit to PF02842, Phosphoribosylglycinamide FT synthetase, B domain, score 4.7e-42" FT misc_feature complement(158236..158535) FT /note="HMMPfam hit to PF02844, Phosphoribosylglycinamide FT synthetase, N domain, score 1.2e-54" FT CDS complement(158633..159364) FT /transl_table=11 FT /locus_tag="BPP2422" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2308" FT /db_xref="InterPro:IPR017856" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7T8" FT /protein_id="CAE37718.1" FT /translation="MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDS FT NPRLRMAWDKATDANMPKDNIQRAIQRGAGGADGESYEEVRYEGYGIGGAAVIVDCMTD FT NRTRTVAEVRHAFAKHGGNLGQEGSVAFMFKHCGQFVFAPGTSEEAVMEAALEAGAEDI FT ATDEEGVIEVVCAPADFTAVRQAFEAAGLKAEVDGVVMKALNETELTGEDAVKMQKLLD FT VLESLDDVQEVYTNVVFDEAQ" FT misc_feature complement(158651..159352) FT /note="HMMPfam hit to PF01709, Domain of unknown function FT DUF28, score 1.3e-118" FT CDS 159441..161039 FT /transl_table=11 FT /locus_tag="BPP2423" FT /product="conserved ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2307" FT /db_xref="GOA:Q7W7T7" FT /db_xref="InterPro:IPR008571" FT /db_xref="UniProtKB/TrEMBL:Q7W7T7" FT /protein_id="CAE37719.1" FT /translation="MHATAHKRRPRLYTWASDFAPFRTAVMPDPIVIAKNVQTELALLP FT ALANRHGCITGATGTGKTVTLQVLAEAFSRIGTPVFMADVKGDLTGVSQAGTPSPKLQE FT RLKNLGLPEPAWGASPVSLWDVFGEQGVPIRATVSDMGPLLLSRMLELNDTQEGVLTLV FT FRVADDEGQLLLDLKDLRAMLQNVADRSAELKTRYGNVSAATVSAIQRGLLRLESQGAE FT QFFGEPMLDVHDLLRTDAQGRGMVNILAADKLMQAPRLYGVFLLWLLADLYEKLPEIGD FT PEQPGLVFFFDEAHLLFNDAPSALLDKIEQVVRLVRSKGVGVYFVTQNPLDIPDTVLGQ FT LGNRIQHALRAFTPRDQKAVKTAAQTMRPNPGLDIEAAITELGVGEALVSLLDAKGRPT FT PTERAWILPPGSRIGPATDAERQALRQAMPLAPKYEQTVDRESAYEVLTARAAADAPAT FT DGARAPAGKNGAPAAPAEEGGLMQGINEVLFGSTGPRGGKRDGVVQSVAKSTARQMARE FT LVRGVLGSLLGSRRR" FT misc_feature 159606..159629 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(161109..162479) FT /transl_table=11 FT /locus_tag="BPP2424" FT /product="putative aminotransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2305" FT /db_xref="GOA:Q7W7T6" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q7W7T6" FT /protein_id="CAE37720.1" FT /translation="MTTLSSAQQQDIQYQLHSYTNAVKHRDVGPRIITHGEGVYVFDDQ FT GNRYLEGMAGLWSVAVGFGEQRLVEAAARQFQELPYYHTFTHKSHPSVIALAERLIGYT FT DGRMAQAFFTNSGSEANDTVVKLVWYYNNALGRRDKKKIIARQRGYHGVTVASTSLTGL FT PGNHKDFDLPLPQIRHTACPHYYRYGLPGETEEDFATRMAGELEAMILREGPDTVAAFI FT GEPVMGAGGVIVPPRTYWQKIQAVCRKYDILVIADEVITGFGRLGQRFGSQVFDIEPDI FT MVLSKQITSSYQPLGAVLLNARVADVVAEHSGRLGTFGHGYTASGHPVATAVALENLRL FT IDERGLIEHAAEMGALLHLELQALSSHPLVGEVRGVGLIAGVELVADKATRQPFDPLGK FT AGGYAYERAHDHGLIVRGIQDTVAFCPPLIITAEQVRDMVARFARTLDDVAAHVAQG" FT misc_feature complement(161130..162419) FT /note="HMMPfam hit to PF00202, Aminotransferase class-III, FT score 2.1e-100" FT misc_feature complement(161607..161720) FT /note="PS00600 Aminotransferases class-III FT pyridoxal-phosphate attachment site." FT CDS 162616..163548 FT /transl_table=11 FT /locus_tag="BPP2425" FT /product="putative 2-hydroxyacid dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2304" FT /db_xref="GOA:Q7W7T5" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W7T5" FT /protein_id="CAE37721.1" FT /translation="MKIIYASCNAIDPREWTEPLQAALPEAEVVAWQAGQPVQHAELAV FT VWNPPAELFERELGLRAAFNLGAGVDALFRLETLPPDFPVVRLEDAGMAVQMAEYAAHA FT LVRASRQFDAYDAQQRAGQWHPLPELDRTQWPVGVLGMGVMGTRVAQTLAGMDYPVAGW FT SRSGNAPQGVQAFGGADALPAFLARTRVLVNTLPLTDETRDLLRRDTLSQLLPGAHLIN FT MGRGEHLVEEDLLALLDSGHMAGAALDVFREEPLPAGHPFWSHPRVAITPHIAAISLRR FT ETVAQLAAKIRAFLRGEPVTGMVTRRRGY" FT misc_feature 162892..163434 FT /note="HMMPfam hit to PF02826, D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD binding domain, score FT 1.6e-15" FT CDS complement(163559..165052) FT /transl_table=11 FT /locus_tag="BPP2426" FT /product="putative aldehyde dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2303" FT /db_xref="GOA:Q7W7T4" FT /db_xref="HSSP:1AG8" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q7W7T4" FT /protein_id="CAE37722.1" FT /translation="MSTLPPLSHWESLAAGLTLRNQAFIDGRWHDGRAGPLAAINPATG FT QLLAEVTACSQADIDQAVAAARRAFESGVWSRMPRRERKQCMLRLAALIREHAEELALI FT ETLDMGKPIGDTMAFDIPETAHTYAWYAETIDKQYDEIAPTDADALATITREPLGVVAA FT VVPWNYPLLMASWKVAPALAAGNSVILKPAEQSSLSALRLAELALQAGIPAGVLNVVPG FT AGPVAGRALGLHMDVDCLAFTGSTATGKRFMEYSGQSNLKQIWLECGGKSPHIIFDDCP FT DLDRAALAAAIGIFNNQGEVCIAGSRLYVQAGIYDTFVSKVEACARAMQPGNPLDPASP FT MGAMVDERQMARVLEYVESGRREGARLRMGGERVRADSGGYYIEPTIFECARPDLTIVR FT EEIFGPVLAVTRFDGEDEVVAQANASAYGLGSGLWTADLSRAHRVSRRLRAGLVWVNCY FT FDGDVTVPFGGVKQSGFGRDKSLHALDKYTSLKTTWIRL" FT misc_feature complement(163565..164971) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase FT family, score 1.1e-206" FT misc_feature complement(164135..164170) FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT misc_feature complement(164234..164257) FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT CDS complement(165049..165972) FT /transl_table=11 FT /locus_tag="BPP2427" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2302" FT /db_xref="GOA:Q7W7T3" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W7T3" FT /protein_id="CAE37723.1" FT /translation="MAPAPAPAAARQRRLGIALFFGALVAFATFDAACKYMLQFYPAPF FT LNVMRYTAVATIAAFMLLRHGLPRLSATPRRGLLVVRGLMLGTVGTCFMTALIWMPLSE FT ATAIYFTSPMIMVALSPWLLGESVGRAQWLAVAVGFGGMLLIVRPGADLPALGTVLMAV FT AAVSYAIFQLLTRKLAGQVPGHVQYAYTAFICLLMTALPAPFFLPQPWPGLADSLVIIA FT LGLCNGLAQILLIGAFQRVEASTLAPLNYCHLLMAVAFSTFWFGMPPDAPATAGMALIV FT AAGIFLVTRRAPGTPRLPVRDKESAA" FT misc_feature complement(165106..165477) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 3.4e-06" FT misc_feature complement(join(165109..165159,165172..165237, FT 165259..165321,165352..165408,165448..165513, FT 165529..165579,165601..165657,165670..165735, FT 165772..165837,165883..165933)) FT /note="10 probable transmembrane helices predicted for FT BPP2427 by TMHMM2.0 at aa 13-30, 45-67, 79-101, 105-124, FT 131-148, 153-175, 188-207, 217-238, 245-267 and 271-288" FT misc_feature complement(165529..165900) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 3.3e-11" FT CDS complement(165975..167237) FT /transl_table=11 FT /locus_tag="BPP2428" FT /product="putative amidohydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2301" FT /db_xref="GOA:Q7W7T2" FT /db_xref="InterPro:IPR010158" FT /db_xref="UniProtKB/TrEMBL:Q7W7T2" FT /protein_id="CAE37724.1" FT /translation="MTTATALSINGQRLWDSLMELAKIGATPKGGNCRLALTELDGQGR FT DLLVRWMREAGLEITVDQVGNIFGRRPGARPELPSVATGSHIDTQPTGGKFDGCFGVLA FT GLEVMRTLQDHDVRTEAPLELAIWTNEEGTRFVPVMMGSGVFCNIFPLETALSATDVDG FT KSVRDELARIGYAGDAPVGQRKLGKYFEAHIEQGPILEAEDKVIGVVTGSLGLRWYDVT FT VTGMEAHAGPTPMPMRRDALYAATHLMQEVVRIALDYAPQGRGTVGVANVYPSSRNVIP FT GKVSFTVDLRHPDAVRLAEMDARLRQACQALGAGDTTGYPVDVDLRDVQHFPLTPFEPA FT LIGAVRQQAEARGYSHMDIVTGAGHDAVYVATVSPTAMIFVPCKDGISHNEVEDADPAH FT LEAGANVLLGAMLQHAGMVER" FT misc_feature complement(166743..166766) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(167257..168321) FT /transl_table=11 FT /locus_tag="BPP2429" FT /product="putative acetylpolyamine aminohydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2300" FT /db_xref="GOA:Q7W7T1" FT /db_xref="InterPro:IPR000286" FT /db_xref="UniProtKB/TrEMBL:Q7W7T1" FT /protein_id="CAE37725.1" FT /translation="MKAFFSEEQLLHVPEQFMRLGRISAPTDVPTRAETLRAMLASRGV FT TVDSPPDYGREPLEGIHSHEYLDYLEHAYTRWQAMRANGADPGPEVLPNLSPYYNGRVE FT HAARGPCPSTSIVAETGYYLSDLSCPVGPHTWRSALRSTHCGVAAADWALQNQALAYAL FT CRPSGHHAHRDRAGGFCYLNSSAAAAQRLAQRCERVVVLDVDAHHGDGTQNIFYQRSDV FT MTISLHADPSGYYPFYTGYAHERGYGSGHGYNLNFPLPHGARNAIFLETLDSALTALRD FT YRPRALVLALGFDTYKDDPISVLKLDMDAYRQIGERINGLGLPTVVVQEGGYMVPAIGP FT ALEAFLQGMAPATV" FT misc_feature complement(167269..168249) FT /note="HMMPfam hit to PF00850, Histone deacetylase family, FT score 1.9e-54" FT CDS complement(168344..168667) FT /transl_table=11 FT /locus_tag="BPP2430" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2299" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q7W7T0" FT /protein_id="CAE37726.1" FT /translation="MNAHTRPRRLTMKRPGAIPTVQIDNERVKVTEWRFPPGGETGWHR FT HGMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEIEI FT KAA" FT CDS complement(168664..169938) FT /transl_table=11 FT /locus_tag="BPP2431" FT /product="aminobutyrate aminotransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2298" FT /db_xref="GOA:Q7W7S9" FT /db_xref="HSSP:1GBN" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q7W7S9" FT /protein_id="CAE37727.1" FT /translation="MDNAELTRRKEAATPRGVGVMCNFYADRAENAELWDTEGRRYIDF FT AGGIAVLNTGHRHPQLMQALQAQMSRFTHTAYQIVPYASYIQLAERINQLAPGDFAKKT FT ALFTTGAEAVENAVKIARAATGRPAVVAFGAAFHGRTLLGMALTGKVVPYKVGFGPFPA FT DIYHVPYPNALHGVSTDDALAALGTLFKTDVDPRRVAAIIIEPVQGEGGFNICPPAFMQ FT ALRALCDDHGILLIADEVQTGFGRTGKLFAMEHYGVAADLTAMAKSLAGGMPLSAVCGR FT AEVMDAPPPGGLGGTYAGNPLAVAAALEVIRIIEAEDLLARGTRLGHQLRDHLEAQRHD FT VPEIAEVRALGAMVAVEFRQPGSDAPSPEFARQVQARALEQGLLLLTCGSDGNVIRFLF FT PLTIPEAVMREALDILARTLRGQNA" FT misc_feature complement(168670..169902) FT /note="HMMPfam hit to PF00202, Aminotransferase class-III, FT score 4.4e-162" FT misc_feature complement(169123..169236) FT /note="PS00600 Aminotransferases class-III FT pyridoxal-phosphate attachment site." FT CDS complement(169979..171616) FT /transl_table=11 FT /locus_tag="BPP2432" FT /product="putative ABC transport ATP-binding subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP2296" FT /db_xref="GOA:Q7W7S8" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W7S8" FT /protein_id="CAE37728.1" FT /translation="MTMNDHETLLSVRDLTIALPRGGDREYAVRDVSYDIRAGEILCIV FT GESGSGKSMSANAIMGLLPDYLQPQGGQILFRGKDLLRQDEATLLSMRGKDMAMIFQEP FT LSALNPLMTVGEQIGEVMRVHDAYPGPQRQRRVLELLAFVGLPDPAVLCDVYPFRLSGG FT QRQRVMIAMALALEPALLIADEPTTALDVTTQAQILALIARIQKEKGMGVMFVTHDFGV FT VAEIAHRVAVMEQGILVEQGPAEEVLNRPQHPYTRRLIAAVPHRRADARPPVAQDAPVL FT AVDKLCKTYVTGHGWFGKKRVVRAVDEVSFEVRRGETLGIVGESGSGKSTIGKCLLKLI FT GIDGGKLVFNGRDIAGLSESQFRPLRKDIQMIFQDPFASLNPRQTVGRIISDGPVANGK FT TRAQAEARARELLTLVGLDPSAFDRYPNQFSGGQRQRIGIARALALEPQVLVADESVSA FT LDVSVQAQVLQLLHELQQRLRIALIFITHDLRVAAQICNAVLVMHRGKVVEYGTPAQIF FT DQPQNPYTQQLIAAVPGQHWDPTKAQTA" FT misc_feature complement(170102..170671) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 6.7e-58" FT misc_feature complement(170288..170332) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(170417..170440) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(170627..170650) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(170909..171502) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 5.1e-62" FT misc_feature complement(171095..171139) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(171458..171481) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(171621..172460) FT /transl_table=11 FT /locus_tag="BPP2433" FT /product="putative integral membrane transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2295" FT /db_xref="GOA:Q7W7S7" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W7S7" FT /protein_id="CAE37729.1" FT /translation="MNGFMKRYMRNYGAVAGLVIVALVVLVALCAPLLYEESPWMMVAS FT PLIPPFTDSAYPFGTDMLGRDITAGLVWGARVSLMVGLLSAGVALLFGIAIGAIAGYCG FT GRIDDALMRFTEFFQTIPQLAMAVVLVAVVGPSVYSIMGAIALVSWPPAARLVRSEFMT FT LKQREFVQAAIVIGQTPGRIVCTQILPNAMSPIIVSASFMVATAILTESSLSFLGLGDR FT NLMSWGFMIGAARTMIREAWWMSVWPGVAILLTVLAINLIGEGLNDALNPQLRKRGE" FT misc_feature complement(join(171672..171737,171801..171866, FT 172023..172088,172152..172217,172356..172421)) FT /note="5 probable transmembrane helices predicted for FT BPP2433 by TMHMM2.0 at aa 13-35, 81-103, 124-146, 198-220 FT and 241-263" FT misc_feature complement(171753..171980) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.00067" FT misc_feature complement(172353..172460) FT /note="Signal peptide predicted for BPP2433 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.911) with cleavage site FT probability 0.601 between residues 36 and 37" FT CDS complement(join(172457..173002,173006..173083, FT 173082..173471)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2434" FT /product="putative integral membrane transport protein FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2294" FT /db_xref="PSEUDO:CAE37730.1" FT misc_feature complement(join(172527..172592,172653..172718, FT 172827..172892,172965..173030,173094..173159, FT 173367..173432)) FT /note="6 probable transmembrane helices predicted for FT BPP2434 by TMHMM2.0 at aa 13-35, 104-126, 147-169, 193-215, FT 251-273 and 293-315" FT misc_feature complement(172598..172813) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 4.4e-11" FT misc_feature complement(173340..173471) FT /note="Signal peptide predicted for BPP2434 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.903) with cleavage site FT probability 0.480 between residues 44 and 45" FT CDS complement(173579..175153) FT /transl_table=11 FT /locus_tag="BPP2435" FT /product="putative solute-binding transport protein FT (periplasmic)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2293" FT /db_xref="GOA:Q7W7S6" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q7W7S6" FT /protein_id="CAE37731.1" FT /translation="MKLTQLFKLSAAAFTLAAALPLTNAHAQTRGGTLNLIVQPEPPIL FT IPALNQQGPTQFITGKIYESLLTYSFDLKPQPGLAKSWEAAPDGLSYTFHLQEGVKWHD FT GKPFTADDVVFSLSDLLPKTHARARVILGKFLDKVEKVDDHTVVVRLKSAFPAFMLMFE FT PGFAPMMPKHIYAGTDYATNPANQKPIGTGPFKFKEWKRGEYVKLERNPDYWKEGKPYL FT DELVFNVIPDSASRAVAFERGSIDALRGGDVDNVDVKRLRGLPDVQYTTQGWEMFSPQA FT YLIFNMRKPPFDNIKVRQAVMHAFNRKLVVDNIFFGLGKISTSPFVPTEMFFDKDIPAI FT PFDMKKARALIKESGINPGDYTIRQLSFPYGATWDRLGEYTKQALEQLGFKVNVESTDA FT GGWASRTGNWDFDLTTTYSYQYGDPALGVQRLYVTSNIVKGSPFANMQGYSNPESDKLW FT EQAAAEVDPAKRQELYNKIQALLVAEVANGFLVDMEFPTLYRGKVKNMVKTAIGMNETF FT DDVYIEK" FT misc_feature complement(173588..175147) FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5, score 1.4e-70" FT misc_feature complement(175073..175153) FT /note="Signal peptide predicted for BPP2435 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.995 between residues 27 and 28" FT CDS 175573..177117 FT /transl_table=11 FT /locus_tag="BPP2436" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2292" FT /db_xref="GOA:Q7W7S5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W7S5" FT /protein_id="CAE37732.1" FT /translation="MKELILSECLLQRLERRGATPLSRQIYDLLRDLILAGDLPAGTKL FT PATRALAVDTGLSRNTVLHAYDQLLAEGYLVSAFGSGTFVSDTVPATPEPPAPPEVEAA FT AQHFALSRRGTKLVREASASDRQWGAFVAGVPDVSLFPRAVWQRLQSRRWRQAPPELLT FT YAYGAGYMPLRRALAEHLRLSRSVKCDADQIVVASGIHQAVSVLARLLGDNGNTAWMEN FT PGYWGARSTLMACGITPVAVAVDDEGMAPSAQQLQDPPRFIFVTPSHQYPLGMVMSLAR FT RRMLLDYAHKRGAWIVEDDYDSEFRFDGRPIASLQGLDQHDRVLYLGTFSKTLFPGIRL FT AYMVLPKPLAGHVATGLSELYREGRLMDQAVLANFIEGGHYATHIRRVKQRYAARQALL FT REAVTRAFGADWPISTHEAGLHLVMHLPDGTDDLGISIAARTLGLHARPLSRYYASEQD FT ARPGLLLGYACVPEKEIEPAFERLVQVITPALEHVERQQRRPVYSDKLNAEAWSGA" FT misc_feature 175648..175827 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 3.2e-14" FT CDS 177222..178289 FT /transl_table=11 FT /locus_tag="BPP2437" FT /product="tartrate dehydrogenase" FT /EC_number="1.1.1.93" FT /note="ortholog of Bordetella pertussis (BX470248) BP2291" FT /db_xref="GOA:Q7W7S4" FT /db_xref="HSSP:1CNZ" FT /db_xref="InterPro:IPR019818" FT /db_xref="UniProtKB/TrEMBL:Q7W7S4" FT /protein_id="CAE37733.1" FT /translation="MAAKHRIAVIAGDGIGKEVMPEGLRVLEAAATRFGIDFQWDHFDW FT SCDYYARHGKMMPDDWAAQIGGHEAIFFGAIGWPDAVPDHEALWGSLFRFRRDFDQYIN FT LRPVRLMPGVPTPLANRKPGDIDFFIVRENTEGEYSNSGGRLFAGTEREVVIQESVFTR FT VGADRVLKFAFELARKRGKHLTAATKSNGISISMPWWDERVAEMAASYPDVRWDKYHID FT ILCAHFVQHPDWFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERKFPSLFEPVH FT GSAPDIYGKGIANPIGQIWSGALMLDFLGYPQAAAAVVAAIEQVLVDGPRTPDMQGKAT FT TAEVGSAIAALVAAG" FT misc_feature 177237..178265 FT /note="HMMPfam hit to PF00180, Isocitrate/isopropylmalate FT dehydrogenase, score 2.4e-93" FT misc_feature 177945..178004 FT /note="PS00470 Isocitrate and isopropylmalate FT dehydrogenases signature." FT CDS complement(join(178308..178604,178608..179894)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2438" FT /product="putative multidrug resistance protein FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2290" FT /db_xref="PSEUDO:CAE37734.1" FT misc_feature complement(178374..178439) FT /note="1 probable transmembrane helix predicted for BPP2438 FT by TMHMM2.0 at aa 27-49" FT misc_feature complement(178662..179825) FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter, score 0.0065" FT misc_feature complement(join(178707..178772,178803..178856, FT 178893..178958,178989..179054,179115..179180, FT 179211..179267,179304..179369,179382..179447, FT 179469..179525,179571..179627,179649..179714)) FT /note="11 probable transmembrane helices predicted for FT BPP2439 by TMHMM2.0 at aa 60-82, 89-108, 123-142, 149-171, FT 175-197, 209-228, 238-260, 280-302, 312-334, 346-364 and FT 374-396" FT CDS complement(join(179891..180391,180391..181110)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2440" FT /product="putative multidrug resistance protein FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2289" FT /db_xref="PSEUDO:CAE37735.1" FT misc_feature complement(join(180038..180391,180391..180936)) FT /note="HMMPfam hit to PF00529, HlyD family secretion FT protein, score 4.9e-59" FT misc_feature complement(180979..181044) FT /note="1 probable transmembrane helix predicted for BPP2440 FT by TMHMM2.0 at aa 22-44" FT CDS complement(181107..182528) FT /transl_table=11 FT /locus_tag="BPP2441" FT /product="putative outer membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2287" FT /db_xref="GOA:Q7W7S3" FT /db_xref="InterPro:IPR010131" FT /db_xref="UniProtKB/TrEMBL:Q7W7S3" FT /protein_id="CAE37736.1" FT /translation="MKRFRLLSAALALALGGCALMDPAPPPVAELDAARLGLSAAGVQW FT PARQWWQRYADPQLDALVSEALASHPSLAAARARLAQANAAVAGARAPLLPRVDANYTL FT TREYLPKNYIYPPPTGGSVVSDNRLALDFSYELDFWGKNRARLQAAVSQRDAADADAQA FT ARNLLARAIVRSYLNLQNAFAQREVLQRVLSQRAEVVDLTRGRKAAGLDTEVEVKQAES FT SLAAGRVELTQNETTIAQLRNQVAALAGAGPVRGQALAPVALTAPGGVIPANVPLELLG FT HRPDVTAARWRAIAARHGIEAAKAEFYPNINLVAFAGFEALGTGRLLDAGSRAAGIGPA FT ITLPIFHGGELNANLAGRRADADLAVSDYNQTVLDAVQQTADAIDALRLLGREQAEQRQ FT AREAIDAAYDLAVKRYRAGLGNYLSVLIAQTGVLTQARLDTDLRIRAYQLDADLAYALG FT GGYAPPATTAASPSH" FT misc_feature complement(181122..181715) FT /note="HMMPfam hit to PF02321, Outer membrane efflux FT protein, score 3.3e-27" FT misc_feature complement(181746..182354) FT /note="HMMPfam hit to PF02321, Outer membrane efflux FT protein, score 1.1e-30" FT misc_feature complement(182466..182528) FT /note="Signal peptide predicted for BPP2441 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.696 between residues 21 and 22" FT misc_feature complement(182475..182507) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(182652..183140) FT /transl_table=11 FT /locus_tag="BPP2442" FT /product="putative transcriptional regulator (MarR family)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2286" FT /db_xref="GOA:Q7W7S2" FT /db_xref="HSSP:1JGS" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q7W7S2" FT /protein_id="CAE37737.1" FT /translation="MNPPRSASSEPFAHYRADSICTRDDNAGFLIKLVSNSLNRMLDLE FT MAPLGLTAMQWRPLAMIASGRADTPAELARLINVDTGAMTRTLDRLEAKGLLRRVRSQE FT DRRVIKIELTPEGQTKAREIPAYIAKVLNHHLRGFSTEEVAQLQHMLRRMIANGSVGG" FT misc_feature complement(182679..182990) FT /note="HMMPfam hit to PF01047, MarR family, score 1.7e-24" FT CDS complement(183199..184056) FT /transl_table=11 FT /locus_tag="BPP2443" FT /product="conserved hypothetical integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2285" FT /db_xref="GOA:Q7W7S1" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W7S1" FT /protein_id="CAE37738.1" FT /translation="MTRQRALVYIHIAAVLFGLTGVFGELIQAGAAVITLGRALFAVGA FT LAVFARMQRRSLLGVLTPAQLFVLVIAGCLLAAHWVTFFISVKVGGIAIATLGFASFPA FT FITLFEGLVFRERVRLAEWLLLGLVTAGLVLVTPSFDLADQGTVGLVWGLVSGFSFAML FT ALTNRRAAAGMDPMQVACWQNAVVALVMLPFAVVHLPALHALDWLWVALLGIFCTGLSH FT YLFVSSLTRLNARSAGLVIALEPVYAIGFAWILFTQVPTLRMLAGAALIVAAIVWSGLR FT KSTH" FT misc_feature complement(183217..183585) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 6.4e-20" FT misc_feature complement(join(183217..183273,183289..183348, FT 183370..183435,183451..183516,183556..183612, FT 183628..183693,183715..183780,183820..183885, FT 183907..183972,183985..184035)) FT /note="10 probable transmembrane helices predicted for FT BPP2443 by TMHMM2.0 at aa 7-24, 28-50, 57-79, 92-114, FT 121-143, 148-167, 180-202, 207-229, 236-256 and 261-280" FT misc_feature complement(183643..184014) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 0.02" FT CDS 184119..185069 FT /transl_table=11 FT /locus_tag="BPP2444" FT /product="conserved hypothetical integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2284" FT /db_xref="GOA:Q7W7S0" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W7S0" FT /protein_id="CAE37739.1" FT /translation="MNRNRQLSDPSRFSGMAAGFFMATLGAVLFSGKAIVVKFTYRYGI FT DAVTLIAFRMLFAMPFFAAVAWWQARRAARGELPVLSWRERGQLCALGLLGYYLSSFLD FT FLGLRHITAGLERLILFLSPSLVVLLSAWWLKRPVTRRQWGAMLLSYVGVALVLSHDLS FT QSGAGADVLTGSFFVFCSALSYSVYLICSGELVERVGATRLVAYAMLVSCVASLIQFFL FT IHPASVLVQPAAVYGYSVIHATVNTVLPVFMLMWAVALVGAPTASLLGMVGPVSVLFLA FT AWFLDEPITVWQLAGTALVLAGVFVLAGRRRPARP" FT misc_feature 184119..184226 FT /note="Signal peptide predicted for BPP2444 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.942) with cleavage site FT probability 0.426 between residues 36 and 37" FT misc_feature join(184155..184223,184266..184322,184383..184442, FT 184470..184523,184542..184595,184623..184691, FT 184728..184787,184830..184898,184917..184973, FT 184983..185042) FT /note="10 probable transmembrane helices predicted for FT BPP2444 by TMHMM2.0 at aa 13-35, 50-68, 89-108, 118-135, FT 142-159, 169-191, 204-223, 238-260, 267-285 and 289-308" FT misc_feature 184200..184595 FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 6.3e-11" FT misc_feature 184452..184481 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature 184665..185045 FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 1.9e-15" FT CDS 185132..186121 FT /transl_table=11 FT /gene="qor" FT /gene_synonym="hcz" FT /locus_tag="BPP2445" FT /product="quinone oxidoreductase" FT /EC_number="1.6.5.5" FT /note="ortholog of Bordetella pertussis (BX470248) BP2283" FT /db_xref="GOA:Q7W7R9" FT /db_xref="HSSP:1IYZ" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W7R9" FT /protein_id="CAE37740.1" FT /translation="MASNIVKAVRIEQHGGPEVLQVVDVEVPPPAANEVTIRQHAAGLN FT FIDIYFRTGLYPHPLPHGLGFEGAGVVEAVGADVRHLKKGDRVAYGQSPLGAYAQARNV FT PAAQVVKLPKGIGFDEAAALMLKGLTVQYLFRQTYRLQGNETILFHAAAGGVGLIACQW FT AKALGVKLIGTVSSPEKAELARAHGAWATIDYSRENVVERLLELTGGKKVPVVYDGVGK FT DTWETSLDCIEPRGLMVSFGNASGPVAGVNLGILNQKGSLYVTRPSLGVHVNTHEKLAA FT AADELFGLVLKKKIKVRIDQRYSLAQAGDAQTALAGRKTTGATVLTLD" FT misc_feature 185171..186115 FT /note="HMMPfam hit to PF00107, Zinc-binding dehydrogenase, FT score 1.1e-80" FT CDS complement(186197..187078) FT /transl_table=11 FT /locus_tag="BPP2446" FT /product="heat shock protease" FT /note="ortholog of Bordetella pertussis (BX470248) BP2282" FT /db_xref="GOA:Q7W7R8" FT /db_xref="InterPro:IPR001915" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7R8" FT /protein_id="CAE37741.1" FT /translation="MKRIFLFLITNLAVMVVLSATMRILGVDRFLTAQGLNLTGLLIFS FT AVIGFTGAIISLLMSKPMAKWSTGARVIDPNAPANQREAWLLDTVHQLADRAGIGRPEV FT AIYQGEPNAFATGAFRNDSLVAVSTGLLDSMTEEEVAAVLGHEVAHVANGDMVTLTLIQ FT GVVNTFVVFLARVVGYFVDRAILKNERGVGLGYYATVIVCEIVFGILASIIVAWFSRQR FT EYRADAGSAHLMGSREPMIRALARLGGLEPGELPKSFEASGISGKNGISAMFASHPPIQ FT ARIAALQHARLG" FT misc_feature complement(186218..186814) FT /note="HMMPfam hit to PF01435, Peptidase family M48, score FT 2.9e-47" FT misc_feature complement(join(186425..186490,186536..186601, FT 186902..186967,186998..187063)) FT /note="4 probable transmembrane helices predicted for FT BPP2446 by TMHMM2.0 at aa 5-27, 37-59, 159-181 and 196-218" FT misc_feature complement(187022..187078) FT /note="Signal peptide predicted for BPP2446 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.977) with cleavage site FT probability 0.707 between residues 19 and 20" FT CDS 187232..188086 FT /transl_table=11 FT /locus_tag="BPP2447" FT /product="probable integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2281" FT /db_xref="GOA:Q7W7R7" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W7R7" FT /protein_id="CAE37742.1" FT /translation="MQALWMLLASAMFAIMGAFVKLASEHGASLPQVVLFRGLPSVVLL FT LIWARAGRQSIIPTSWRLHVWRNLSGVTSMWLGFFALAHLPLATATSLNYTAPLFIACW FT MLGWGGAQRDPVRIAAVALGFLGVIAVLRPSVNDDQWLAALLGLTAGAMSAIAMLQIRQ FT LGRVGEPEWRTVLFFSVAVCASSGVGLLLGGWGRADLYGYLALFGVGTSGLVGQLTMTR FT AFGHGSALLTAALQYTTIIFAAFIGMGLWGDALDNLAWMGMGLIIFAGLLSVWRTMRRP FT GGA" FT misc_feature 187232..187300 FT /note="Signal peptide predicted for BPP2447 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.981) with cleavage site FT probability 0.416 between residues 23 and 24" FT misc_feature join(187244..187300,187328..187387,187424..187492, FT 187502..187555,187574..187627,187655..187714, FT 187751..187819,187829..187888,187907..187975, FT 188003..188056) FT /note="10 probable transmembrane helices predicted for FT BPP2447 by TMHMM2.0 at aa 5-23, 33-52, 65-87, 91-108, FT 115-132, 142-161, 174-196, 200-219, 226-248 and 258-275" FT misc_feature 187262..187630 FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 0.021" FT misc_feature 187685..188056 FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 0.0088" FT CDS 188139..188990 FT /transl_table=11 FT /locus_tag="BPP2448" FT /product="putative sulfurtransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2280" FT /db_xref="GOA:Q7W7R6" FT /db_xref="HSSP:1URH" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:Q7W7R6" FT /protein_id="CAE37743.1" FT /translation="MTMTLISAADLAARLDAGGVRVFDVRHDLADHAAGRRAYEQGHIA FT GARYLDHEAELAAPRSGSNGRHPLPERDAFAGLMAAHGVTPETLVVAYDASGGMFAAHL FT WWMLRWMGHERVAVLDGGWQAWTAAGLPTEAGATPAVSAQPGARAGQSLAGTVDAAAVL FT ANIGQPAFTVIDARAANRYRGEVEPMDPVAGHIPGALNRPNTENLQADGRFKAPAQLRQ FT EFEALLGGRAADGIVHQCGSGITACHNLLAMEIAGLAGSRLYPGSWSEWCSDAARPVAK FT GA" FT misc_feature 188157..188525 FT /note="HMMPfam hit to PF00581, Rhodanese-like domain, score FT 1.4e-15" FT misc_feature 188610..188960 FT /note="HMMPfam hit to PF00581, Rhodanese-like domain, score FT 9.6e-10" FT CDS complement(189007..189576) FT /transl_table=11 FT /locus_tag="BPP2449" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2279" FT /db_xref="GOA:Q7W7R5" FT /db_xref="InterPro:IPR003607" FT /db_xref="UniProtKB/TrEMBL:Q7W7R5" FT /protein_id="CAE37744.1" FT /translation="MALTLQDIEQIFLERGHRAYDGEPVSHLKHALQTATLAEQGGAGP FT HLITASLLHDLGHLIAAHPGTPSLRGLDDKHQYFVLPFLRGLFGNAVLDPIRLHVEAKR FT YLCFVEPAYATRLSADSRRSLTLQGGSFDTGQAVDFASMPGAPDAIRLRRWDDQAKQPG FT MQTGSLTHFLEIAEGVAGRAKVAAIW" FT CDS complement(189607..190437) FT /transl_table=11 FT /locus_tag="BPP2450" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2278" FT /db_xref="GOA:Q7W7R4" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W7R4" FT /protein_id="CAE37745.1" FT /translation="MARCGTVTKAAAQLGVSQPTVTGQLRQLESRYGVELFHRQGRGLR FT LSDAGHRLMPLVEKLVQQESEIEFRLRDASDLREGCLRVGATGPFYIMDTVRRYNQRYP FT AIELSVAIGNSQSMLQALHDYRIDVATSSVAMNNPNLYRRAIAADPLRIVVHRGHPLAA FT RASAGLADLAPYALLLREPGSMTRQLTEEALQKAGVAPARVLEIGSRESIRQAILCNLG FT VSLIPSREVPAHAELATVAIADTEVLMHEHLYCLRERQPVQLIARFLELAPSAA" FT misc_feature complement(189613..190215) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 9.8e-35" FT misc_feature complement(190285..190437) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 9.8e-14" FT misc_feature complement(190330..190422) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 190630..191706 FT /transl_table=11 FT /locus_tag="BPP2451" FT /product="putative ABC transport ATP-binding subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP2277" FT /db_xref="GOA:Q7W7R3" FT /db_xref="HSSP:1G29" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W7R3" FT /protein_id="CAE37746.1" FT /translation="MSRGSDAFLSIRNLVKHYGVHRALADVSLDIGAGELVCLLGPSGC FT GKTTLLRAIAGLERQDGGAIVLGGRDISNEPPQARDYGILFQSYALFPNLTVAQNVAYG FT LSGRRGDRERVAARVDEMLALVGLSGAARKYPGQISGGQQQRVALARALAPAPSLLLLD FT EPMSALDARVRDRLRGELRALQRRLSITTLMVTHDQEEAMVMADRIAVMNGGVIEQYGT FT PRELYRDPRSAFIADFVGEANWLQYQRIDAHRARVGQLELDVEQPLQADSGRLFVRPEA FT VRLSASGTPASANTVLADVLDGVFLGRGYRISLRLEGIPGATVQSVVSAETGDALLGAH FT AAGRCWVELPRHALRAYA" FT misc_feature 190729..191274 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.1e-63" FT misc_feature 190750..190773 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 191044..191088 FT /note="PS00211 ABC transporters family signature." FT CDS 191693..193462 FT /transl_table=11 FT /locus_tag="BPP2452" FT /product="putative ABC transport permease" FT /note="ortholog of Bordetella pertussis (BX470248) BP2276" FT /db_xref="GOA:Q7W7R2" FT /db_xref="InterPro:IPR017664" FT /db_xref="UniProtKB/TrEMBL:Q7W7R2" FT /protein_id="CAE37747.1" FT /translation="MPTLESAVAKAPRRAAIARPAAAAAPVRRALPAWTGTLGRWGGQG FT LFVAALVLFLALPLLAILLKAVAPGADGAAGVGVLAAIVADSAFLGLVWRSLAVGAATV FT ALVVPCAYAYAYCLTRTRAPGKGVLRLVALLPLLAPSLLPGIALIYLLGNQGLLKALAG FT GATIYGFWGIVIGEAFYTFPHALMILLTGLALADGRLYDAARAMGAGPWRTFATVTLPG FT TRYAVFSACCLVFTLTVTDFGVPKVVGGDYNVLAMEAYKAVVGQQNFSKGAAIGLLLVP FT AMLTFLLDRHLRARHGAGLSGRAQVYAPGTHRLRDACFLAIAALIGLALLTIVGVAVWA FT SFVKMWPYNLSLSLRSYDFDNMDGGGWLAWRNSIQLAAWTALAGTALVYGGAWMMEKLP FT TRGVPAAALRGTARMLALTPMAVPGLVLGLGYIFFFNSPGNPLGALYGTMTLLVVCTVV FT HFYTSAHLTAVTALGALDTEFEAASASLKVPAALTFLRVTLPMCLPAVLDTARYLFVSA FT MTTVSAVVFLYSPQTVLAAVAVLNMDDAGFIGPAAAMCTAIMATSALASLLLHLASRAL FT VARTQAWRRAPAA" FT misc_feature join(191813..191881,191900..191968,191978..192046, FT 192083..192151,192209..192277,192365..192424, FT 192497..192556,192641..192709,192809..192877, FT 192935..193003,193016..193075,193226..193294, FT 193337..193405) FT /note="13 probable transmembrane helices predicted for FT BPP2452 by TMHMM2.0 at aa 41-63, 70-92, 96-118, 131-153, FT 173-195, 225-244, 269-288, 317-339, 373-395, 415-437, FT 442-461, 512-534 and 549-571" FT misc_feature 192266..192484 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 3.4e-05" FT misc_feature 193103..193333 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.052" FT CDS 193479..194309 FT /transl_table=11 FT /locus_tag="BPP2453" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2275" FT /db_xref="GOA:Q7W7R1" FT /db_xref="HSSP:1FEZ" FT /db_xref="InterPro:IPR006323" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7R1" FT /protein_id="CAE37748.1" FT /translation="MNAMTLATLPVRLEALVFDWAGTLVDFGSFAPTKVFVDAFARFGV FT QISLEQARGPMGMGKWDHIRALCNDAAIARQYQEQFGRLPTDEDVTAIYERFLPMQLEK FT VAEYSQPIPGAIELLHGLRQRGLKLGSCSGYPAAVMQRVLERAEREGLALDYVVASDDV FT PRSRPAPAMALRNVVELGIADVAGCVKVDDTAPGVEEGRRAGMWTVGLLLSGNAAGLSL FT EQFLSLDEAGREAARDRARAELQAGAPHYLIDTVADLPPVLADIETRLAAGQRP" FT misc_feature 193515..194120 FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase, score 3.5e-25" FT CDS 194338..195360 FT /transl_table=11 FT /locus_tag="BPP2454" FT /product="putative periplasmic protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2274" FT /db_xref="GOA:Q7W7R0" FT /db_xref="InterPro:IPR017663" FT /db_xref="UniProtKB/TrEMBL:Q7W7R0" FT /protein_id="CAE37749.1" FT /translation="MKRIPSILLAAVLAAAAGVAAADTTLTVYTALEADQIKAYQAAFE FT KAHPDIRIQWVRDSTGIVAAKLLAEKNNPKADVIWGLAGTALGLMDKEGMLLPYAPKGL FT DQIAANMRDGKDVPAWVGMDAYAAAVCVNTIEASKQNLPMPTSWQDLTKPEYAGKIVMP FT NPASSGTGFLDVSAWLQMFGEEKGWAFMDALHKNMGPYTHSGSKPCNMAAAGEYPIGIS FT FDYRAAKLKADGAPVEAVFPSEGLGWEVEATAIVKGTKHLEAARKLADFSASRQANELY FT KSNFAVLAIPSVATVNPHLPANLSERMIKNDFVWAATNRDRIIAEWSRRYDGKSEPKKK FT " FT misc_feature 194338..194403 FT /note="Signal peptide predicted for BPP2454 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.625 between residues 22 and 23" FT misc_feature 194356..194424 FT /note="1 probable transmembrane helix predicted for BPP2454 FT by TMHMM2.0 at aa 7-29" FT misc_feature 194422..195351 FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding protein, score 9.4e-11" FT CDS 195425..196552 FT /transl_table=11 FT /locus_tag="BPP2455" FT /product="putative secreted oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2273" FT /db_xref="GOA:Q7W7Q9" FT /db_xref="InterPro:IPR017741" FT /db_xref="UniProtKB/TrEMBL:Q7W7Q9" FT /protein_id="CAE37750.1" FT /translation="MKTYDVVVVGAGMLGIAHAWAAARRGLSVAVVERSQRAHGATIRN FT FGQVLVTGQAPGVMARHARQSRELWLELAAGAGFHVRANGSLVLARSALEQDVLEEFAA FT ARLQAEGYRAELLSGRELARLFDGRLGHHCAALRGHDDLQIYSREALPAITAYLADRFG FT VEFLTATLASAVREGVVQTSAGALRGRHAFVCPGHDYLTLAPELFAPLGLQVSCLQMLR FT VAFETRPFALDRPLLTGLSCVYYGAFSDLPTARTLRESLQRHEPDLLDNGIHLLVSPTP FT HGELIIGDSHRYGVDALPFNDEQVDCAMLDLAQQALGCRLRVIERWQGVYGAHGPAPFS FT VLPVDDQTTVAVMHSGVGMTVGLAVGENTVQARLG" FT misc_feature 195425..195487 FT /note="Signal peptide predicted for BPP2455 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.947) with cleavage site FT probability 0.825 between residues 21 and 22" FT CDS complement(196772..197305) FT /transl_table=11 FT /locus_tag="BPP2456" FT /product="Putative sigma-70 factor, ECF subfamily" FT /note="Similar to Pseudomonas aeruginosa probable sigma-70 FT factor, ECF subfamily PA4896 SWALL:Q9HUR7 (EMBL:AE004902) FT (178 aa) fasta scores: E(): 6e-40, 61.36% id in 176 aa, and FT to Escherichia coli probable RNA polymerase sigma factor FT FecI or B4293 SWALL:FECI_ECOLI (SWALL:P23484) (173 aa) FT fasta scores: E(): 7.1e-18, 39.61% id in 154 aa" FT /db_xref="GOA:Q7W7Q8" FT /db_xref="InterPro:IPR007627" FT /db_xref="UniProtKB/TrEMBL:Q7W7Q8" FT /protein_id="CAE37751.1" FT /translation="MKACSPSSGMCGRDKVAALYQEHHAWLRSWLGYRLHSWGRCVAED FT LAHDIFVRMLAAHRLDQMIERPRAYLAVAAKGVLVSWLRRQSLERAWLETLQALPPAMH FT PSPERQALALETLHGIDAALDTLRPCIKRVFLMAVLGGMKQRDIAHAMDIAIPTVKRYM FT RQAYVACLHLMPDD" FT CDS 197514..200456 FT /transl_table=11 FT /locus_tag="BPP2457" FT /product="putative extracellular heme-binding protein" FT /note="Similar to Serratia marcescens HasR protein FT SWALL:P72473 (EMBL:Y08983) (899 aa) fasta scores: E(): FT 8.8e-19, 25.71% id in 1019 aa, and to Pseudomonas FT aeruginosa hypothetical protein Pa4897 SWALL:Q9HUR6 FT (EMBL:AE004902) (989 aa) fasta scores: E(): 9.4e-170, FT 58.24% id in 989 aa" FT /db_xref="GOA:Q7W7Q7" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q7W7Q7" FT /protein_id="CAE37752.1" FT /translation="MAPNHFRLASLVVPSSRTTLAALCLLAGVAVGAQAATSRADVALA FT ASRARTAGADSVHDFDIAAGPLDQALAAFASQSGLRLAIDATLTRGLSAPALRGRHTAR FT TGLRRLLASSHLQAVVHDDGSLVLRRDPTLPTFELSPVRVLSDPVRDVYLAPRSSVYVS FT AVDIARFGVVSPADLLKGLPGVQTGDSRNGGGLDVNIRGIQGQSRVAVKVDGAEQALDV FT YRGYAGTQQRSYIDPDLVSDIVIDKGPSLAPAAAGAIGGTVRMRTIGVQDILRDGQSVG FT LRVTGSLWNNGVSPASRDPHPRHPPEDAELAAPPRTQRGNLFGSDAQAGSVAFAYSDAT FT FDVVAAYARRSQGNYFTGRHGHDRYRVFEGNAERASVATAYRPGEEVLNASARTESVLL FT KGALRPADGHSVELGYRRLDGRYGEIMPSDIFRYGTAGIWQYPLGTVLVDTTTARYRYT FT PSGTDLVDATVNLWTTYAKTRQLNTVIAPASEFYRDDRNWVRVANRRIGGDFGNTARLS FT SAYGEFRLELGGAFQYEDIGPQRGVRITQHDRNGNRYLRDAARRELGLNAKLTYQPTER FT FTAWAGVRYARMRHRDHNSHATPRQAQRLMRRIVITNPDDDGIMSYGYMDWFPDANGQF FT TDATDPRLHNGTVYRDAELPSEGIAFDDFLVNARTNVRVTDASVRDTVIGYDFSPPRIN FT RDQGLAPALGVDYEIAPDMHVYASYTQGLRMPSLFETSLGVLQTTPGAGLRPERAHSWE FT AGIGAMRDDLLQAGDSAAYKLAYFRNDIRNYITRYYRPGANGLMTFSNAERYRVHGLEL FT QTRYDVGRYFADLSATYYLKTGTCDPAFAAQLRASAGRGRSTQDTPDCTPGSFMGSYAN FT TQNPPRLAVNVTAGLRLLSQALTLGARMTHTSGPTARADRPWQQGATTAQLLYHPLTVY FT DLFLAYRVHKRVALNISLQNLTDRYYLDPLAQSYMPAPGRTLRVGLQAWF" FT misc_feature 197514..197618 FT /note="Signal peptide predicted for BPP2457 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.959 between residues 35 and 36" FT misc_feature 200118..200450 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00593, TonB dependent receptor FT C-terminal region, score 0.0031" FT misc_feature 200400..200450 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="PS01156 TonB-dependent receptor proteins signature FT 2." FT CDS complement(200521..201813) FT /transl_table=11 FT /locus_tag="BPP2458" FT /product="putative iron-sulfur protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2804" FT /db_xref="GOA:Q7W7Q6" FT /db_xref="InterPro:IPR018184" FT /db_xref="UniProtKB/TrEMBL:Q7W7Q6" FT /protein_id="CAE37753.1" FT /translation="MRITPPVNPDGVQFPIWDRPDRFFFAPERHERHDLSRPGFFIRAE FT GIMTDIGRMAHVVPARTQLPVSAYFDEARFAREQELIFKQSSLYVGHQKLVPELGDWRT FT LVQEDGGRALVRNQQGVELVSNVCRHRQALMLGGEAGNVSGNANTRGSLKDTGGNIVCP FT LHRWTYNDRGELLGAPQFDATPCMNLQRFRLRDCHGLLFEGPRDPAADMAPLFARPEFD FT FGDYVLDHVEVHQCNYNWKTFIEVYLEDYHVGPFHPGLGRFVTCDDLAWEFNDWYSLQR FT VGVHQALAQPGSAVYKQWHDRLLDFRAGQAPDFGAMWVTYFPTHMIELYPHVLVLSTLY FT PKSPQETLNVVEFYYPEEIVAFEREFVEAQRAAYMETAIEDDEIAERMDAGRKALMLRG FT ANETGPYQSPMEDGMQHFHEWYRRVMGETED" FT misc_feature complement(201202..201558) FT /note="HMMPfam hit to PF00355, Rieske [2Fe-2S] domain, FT score 1.8e-15" FT misc_feature complement(201685..201708) FT /note="PS00242 Integrins alpha chain signature." FT CDS complement(201820..202839) FT /transl_table=11 FT /locus_tag="BPP2459" FT /product="putative integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2803" FT /db_xref="GOA:Q7W7Q5" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:Q7W7Q5" FT /protein_id="CAE37754.1" FT /translation="MPTIEDRYARLDAARWLAALAVVLLHSAAQTVSDPAAYGSHAWLA FT ANLYDSAAHWCVPVFVMVSGALLLDPDQPHDARRFYSRRMARVCAPLLFWTLFYLAWRT FT ALDWWDDGRLDFSFWPRKVAEGAPYYHLWYLYMIVGLYLFAPLVRLLYARSQPRARALW FT VVGILGVAVLDALYRRALGGGNGLFLTWFLPYLGYFVAGRLIFDGELRMPRPGLVLAAS FT VAATAWGVSALSDSRALDLYFYDYFSVTVPLMSLAAFQLIVGSPRLPALPALPALAPLT FT FGIYLIHPLFLDLAHRIGAARAWRPDAWGVPAITAAVFALSALASWMLRRHRLTRRLV" FT misc_feature complement(join(201853..201918,201964..202029, FT 202051..202116,202147..202200,202222..202278, FT 202309..202362,202384..202449,202522..202572, FT 202633..202683,202744..202800)) FT /note="10 probable transmembrane helices predicted for FT BPP2459 by TMHMM2.0 at aa 13-32, 52-69, 89-106, 130-152, FT 159-177, 187-206, 213-231, 241-263, 270-292 and 307-329" FT misc_feature complement(201880..202671) FT /note="HMMPfam hit to PF01757, Acyltransferase family, FT score 0.0062" FT CDS complement(203010..203975) FT /transl_table=11 FT /locus_tag="BPP2460" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2802" FT /db_xref="GOA:Q7W7Q4" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W7Q4" FT /protein_id="CAE37755.1" FT /translation="MLRKGLQLLAALSLSLAAASVSAQSFPARPIKVVSPFPAGGATDV FT LTRLLTERMAKDLGQPMIVENKAGAGTSIGAAYVARENPDGYTLLMATNSTLVTNRYLY FT KELPYDPDSFVPIGMVGIGPLVLLASPKHGFKSTQDIVAYAKQHPGKLTFATFGAGTSS FT HLAAELFKKQAGIDILHVPFKGATQALPALISGDVDLFFDMVATGMPQAEAGKIDVFAI FT TSPTRLATLPKLATLTEQGYPNEMTAWFTFVAPHGTPEAVRARLEQALQATLKDETVRA FT KMLAMGIDPRSGTAQELTTQMKNEQPVVSQLIKQANIVLQ" FT misc_feature complement(203022..203840) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 2.9e-89" FT misc_feature complement(203907..203975) FT /note="Signal peptide predicted for BPP2460 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.947 between residues 23 and 24" FT CDS 203988..204980 FT /transl_table=11 FT /locus_tag="BPP2461" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2801" FT /db_xref="GOA:Q7W7Q3" FT /db_xref="InterPro:IPR014757" FT /db_xref="UniProtKB/TrEMBL:Q7W7Q3" FT /protein_id="CAE37756.1" FT /translation="MRMGWDAGVSRSGEAGGPRWPANSLSKPQDACLNSVYRNFILLSE FT INYKNDAIPMQPFSTRPPDPDGLPASQPARRKRAASAAGAASPDFITALARGLDVLRCF FT RPGVRALGNLDLARLTGLPKPTISRITYTLTELGYLRYHADTGKYSPGYAVLALGFGVL FT ASLEVRELAKAGMSELAVQTGGAVALGAFDNDAMVYVEAMHGSPALYLRLPVGYRASLD FT TAMGRAYLAALPEAARQALLGRLGQAAPPPAMVARAVEELSAEGCCYALGEWQSGINAV FT AVPFASVTGEGVFVMSCGGPLGLLPERTLREQVAPALRQAAARLAGGAG" FT misc_feature 204432..204971 FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator, score 5e-12" FT CDS 205067..205333 FT /transl_table=11 FT /gene="xseB" FT /locus_tag="BPP2462" FT /product="exodeoxyribonuclease VII small subunit" FT /EC_number="3.1.11.6" FT /note="ortholog of Bordetella pertussis (BX470248) BP2800" FT /db_xref="GOA:Q7W7Q2" FT /db_xref="InterPro:IPR003761" FT /db_xref="PDB:1VP7" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7Q2" FT /protein_id="CAE37757.1" FT /translation="MASSKQADPQTDARPLPQDFETALAELESLVSAMENGTLPLEQSL FT SAYRRGVELARVCQDRLAQAEQQVKVLEGDLLRPLDPAALDDE" FT misc_feature 205118..205303 FT /note="HMMPfam hit to PF02609, Exonuclease VII small FT subunit, score 3.4e-23" FT CDS 205338..206249 FT /transl_table=11 FT /locus_tag="BPP2463" FT /product="probable geranyltranstransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2799" FT /db_xref="GOA:Q7W7Q1" FT /db_xref="InterPro:IPR000092" FT /db_xref="UniProtKB/TrEMBL:Q7W7Q1" FT /protein_id="CAE37758.1" FT /translation="MKQSHLACADWLRERAQHVEHVLDELLPGADIAPTRLHEAMRYAV FT LGGGKRVRAVLVYAAGQACPVNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDT FT LRRGRPTVHVQFDEATAMLAGDALQPLAFELLAGMPIAPALVVQAAQVLARAAGSQGMA FT GGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAI FT GLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSLLGLDQARALAQELRQAAHQAL FT APLGESGARLGQLADFIVLRDR" FT misc_feature 205446..206234 FT /note="HMMPfam hit to PF00348, Polyprenyl synthetase, score FT 3.8e-88" FT misc_feature 205611..205661 FT /note="PS00723 Polyprenyl synthetases signature 1." FT misc_feature 206001..206039 FT /note="PS00444 Polyprenyl synthetases signature 2." FT CDS 206299..208161 FT /transl_table=11 FT /gene="dxs" FT /locus_tag="BPP2464" FT /product="1-deoxy-D-xylulose 5-phosphate synthase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2798" FT /db_xref="GOA:Q7W7Q0" FT /db_xref="InterPro:IPR005475" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7Q0" FT /protein_id="CAE37759.1" FT /translation="MTTELLDRILSPADLRQLDRRELKRLADELRGFVLESVSRTGGHL FT SSNLGTVELSLALHYVFDTPHDRIVWDVGHQSYPHKILTGRREGMAHLRQQGGISGFPK FT RSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAG FT VTPNINLLVVLNDNDMSISPPVGALNRYLARLMSGQFYAAAKNVGRAVLQHVPPVLELA FT RRLEEHAKGMVTPATLFEEFGFNYVGPIDGHDLDALVPTLQNLRALPGLQFLHVVTRKG FT QGYKLAEADPVLYHGPGKFDPAVGIQQAKAPARKTFTQVFGQWLCDMAERDERLVGITP FT AMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQL FT VHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVAAPSDESEARLLLS FT TCYEHPGPASVRYPRGAGCGAAVGEGLATVPLGKGLVRREGRRIAILGFGTLVQAALGA FT AGQIDATVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAVLETLAEAGVTL FT PVLQLGLPDAFIDHGDQAALLAGLGLDAAGIERAIRARFGALLA" FT misc_feature 206389..206448 FT /note="PS00801 Transketolase signature 1." FT misc_feature 207238..207732 FT /note="HMMPfam hit to PF02779, Transketolase, pyridine FT binding domain, score 5e-59" FT misc_feature 207769..208119 FT /note="HMMPfam hit to PF02780, Transketolase, C-terminal FT domain, score 5.8e-40" FT CDS 208318..209115 FT /transl_table=11 FT /locus_tag="BPP2465" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2797" FT /db_xref="GOA:Q7W7P9" FT /db_xref="InterPro:IPR003801" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7P9" FT /protein_id="CAE37760.1" FT /translation="MNSPIDPAIVMPDVQSSTDTRHIPIQRVGIRGVRHPMLVLAGDGA FT AQPTVANWTLTVALPAEEKGTHMSRFVALLEKYRATPMTPALFAAMAREMLPLLHAERG FT DITASFPYFINKSAPVSGVQSLLDYEMQWIARAVGEQVEFELVAQVPVTSLCPCSKAIS FT EYGAHNQRSHVTVSAIVDGDFRMDELIRLVEDEASCELWGLLKRPDEKYVTERAYDNPK FT FVEDLVRDVAARLKAHPGIGRFRVEAENFESIHNHSAYAVVEG" FT misc_feature 208345..209109 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02649, Uncharacterized ACR, FT COG1469, score 4.4e-34" FT CDS 209242..209715 FT /transl_table=11 FT /gene="rpsF" FT /locus_tag="BPP2466" FT /product="30s ribosomal protein s6" FT /note="ortholog of Bordetella pertussis (BX470248) BP2796" FT /db_xref="GOA:Q7W7P8" FT /db_xref="InterPro:IPR014717" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7P8" FT /protein_id="CAE37761.1" FT /translation="MLDCLVLGGGLSLAGASIAWLAGETSSRSPYMRHYEVVFIVHPDQ FT SEQVPAMVERYQALVTGQSGTVHRLEDWGRRQLAYPIQKLVKAHYVCMNIECGQATLDE FT LEHSFRYNDAVLRHLVIKTKKAPAAPSIMMKSVEREEARKASAEAAATATAAE" FT misc_feature 209242..209304 FT /note="Signal peptide predicted for BPP2466 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.910) with cleavage site FT probability 0.654 between residues 21 and 22" FT misc_feature 209338..209610 FT /note="HMMPfam hit to PF01250, Ribosomal protein S6, score FT 1.8e-39" FT CDS 209763..210086 FT /transl_table=11 FT /gene="priB" FT /locus_tag="BPP2467" FT /product="primosomal replication protein n" FT /note="ortholog of Bordetella pertussis (BX470248) BP2795" FT /db_xref="GOA:P67675" FT /db_xref="InterPro:IPR000424" FT /db_xref="PDB:3FHW" FT /db_xref="UniProtKB/Swiss-Prot:P67675" FT /protein_id="CAE37762.1" FT /translation="MNTLELSARVLECGAMRHTPAGLPALELLLVHESEVVEAGHPRRV FT ELTISAVALGDLALLLADTPLGTEMQVQGFLAPARKDSVKVKLHLQQARRIAGSMGRDP FT LVG" FT CDS 210179..210451 FT /transl_table=11 FT /gene="rpsR" FT /locus_tag="BPP2468" FT /product="30s ribosomal protein s18" FT /note="ortholog of Bordetella pertussis (BX470248) BP2794" FT /db_xref="GOA:Q7W7P6" FT /db_xref="InterPro:IPR018275" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7P6" FT /protein_id="CAE37763.1" FT /translation="MAFFGKRKEKRKFTQQNPLFKRRKFCRFTAAGVEEIDYKDLDTLR FT DFVQENGKIIPARLTGTRAIYQRQLDTAIKRARFLALLPYTDNHK" FT misc_feature 210266..210427 FT /note="HMMPfam hit to PF01084, Ribosomal protein S18, score FT 5.1e-26" FT CDS 210467..210922 FT /transl_table=11 FT /gene="rplI" FT /locus_tag="BPP2469" FT /product="50s ribosomal protein l9" FT /note="ortholog of Bordetella pertussis (BX470248) BP2793" FT /db_xref="GOA:Q7W7P5" FT /db_xref="HSSP:1CQU" FT /db_xref="InterPro:IPR020070" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7P5" FT /protein_id="CAE37764.1" FT /translation="MQIILLEKVANLGNLGEVVRVRDGYARNFLIPQKKARRATDAALK FT EFEARRAELEKVQAEKLAAAQALAERLNGFQLKISQKAGVDGRLFGSVTNADVAEGLRK FT AGFEAVEKSQVRMPNGQIKAVGEYPVQAVLHADVVADVVVLVEGEMA" FT misc_feature 210467..210913 FT /note="HMMPfam hit to PF01281, Ribosomal protein L9, score FT 3.4e-51" FT misc_feature 210503..210586 FT /note="PS00651 Ribosomal protein L9 signature." FT misc_feature 210963..210970 FT /note="Duplication due to IS1001 insertion" FT repeat_region 210971..210983 FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT repeat_region 210971..212277 FT CDS 211054..212274 FT /transl_table=11 FT /locus_tag="BPP2470" FT /product="transposase" FT /note="transposase for IS1001 element" FT /db_xref="GOA:Q7W7P4" FT /db_xref="InterPro:IPR002560" FT /db_xref="UniProtKB/TrEMBL:Q7W7P4" FT /protein_id="CAE37765.1" FT /translation="MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCE FT QCGARCRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRYQRVT FT DRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPDWSKIEYLAMDEFA FT LHKGHRYATVVVDPISRQVLWIGPGRSRETARAFFEQLPPGAAQRIKAVAIDMTTAYEL FT EIQAHSPQAEIVYDLFHVVAKYGREVIDRVRVDQANQLRQDRPARRIIKSSRWLLLRNR FT DNLDRQQAVRLDELLQANQPLLTVYVLRDELKRLWFYQRPAWARQAWNHWYKQAEQSGI FT AALNTFAQRLKGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRA FT AFPGNAR" FT misc_feature 211144..212133 FT /note="HMMPfam hit to PF01610, Transposase, score 1.2e-128" FT repeat_region complement(212265..212277) FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT misc_feature 212278..212285 FT /note="Duplication due to IS1001 insertion" FT CDS 212355..213191 FT /transl_table=11 FT /locus_tag="BPP2471" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2792" FT /db_xref="UniProtKB/TrEMBL:Q7W7P3" FT /protein_id="CAE37766.1" FT /translation="MNEPPLHHNAPPGLRAWLDGEQAAAIRSVKEVTVDGVPCVVKRRR FT PGVRRGISYVLRYLRAFFLALLCRILLGEFPRPSVLLRNGLDYEAERLRRLLQAGCRVP FT EVWWQEPGLLVLEHVGDDLPFRLRQVDEAGRIALAQALARDLAEFHGRGMWHGGAQVRN FT VTLRDGRLWRIDFEENIGGALSLPLAQAYDLYQTLASLVSLRKLPPEQASHLGKLVLDT FT YFAAHPDSEVRARMRRIARLICGAARLLRPLGGRLPWRDVRAFFWVAETLRLLLHP" FT CDS 213188..214561 FT /transl_table=11 FT /gene="dnaB" FT /locus_tag="BPP2472" FT /product="DNA helicase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2791" FT /db_xref="GOA:Q7W7P2" FT /db_xref="HSSP:1B79" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W7P2" FT /protein_id="CAE37767.1" FT /translation="MNTPADPQLEYLRVPPHSIEAEQSVLGGLLLDNAAWDRIADVLVE FT EDFYRHDHRLIWHHIARLIGLARPADVITVNESLASAGKSEEVGGLAYLNALAHNTPSA FT ANIRRYAEIVRERAMLRKLVSIADEISAAALNPQGKEARQLLDEAESKVFKIAQEGERG FT SAGFQEIQPLLTQVVERIDELYHRESESDVTGVPTGFADLDKMTSGLQAGDLVIVAGRP FT SMGKTSFSMNIGEHVAIEQGLPVAVFSMEMGAVQLAMRMLGSVGMLDQHRMRTGKLVAD FT DWPRVTHAVQLMQDAQVYIDETPALSSMEVRARARRLARQCGQLGLIIIDYLQLMSANS FT AGENRATEISEISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQD FT ADVILFIYRDEVYNPDSPDKGSAEIIIGKQRNGPIGTVRLTFQGSSTRFLNFAPGTQY" FT misc_feature 213305..214357 FT /note="HMMPfam hit to PF00772, DnaB-like helicase N FT terminal domain, score 2.7e-155" FT misc_feature 213845..213868 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(214582..215550) FT /transl_table=11 FT /locus_tag="BPP2473" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2790" FT /db_xref="GOA:Q7W7P1" FT /db_xref="InterPro:IPR002657" FT /db_xref="UniProtKB/TrEMBL:Q7W7P1" FT /protein_id="CAE37768.1" FT /translation="MQRIARFLPDRFTLLLVATVIIASLAPAYGQGIVAFGWITNLAVA FT LLFFLHGARLSRDAIVAGVTHWRLHLTIFSATFLMFPLLGVALKPVLEPLVTPELYLGV FT LFLCCLPATVQSAIAFTSIARGNVPAAVCSASASSLLGIFITPLLVGTVVASAAAAPIS FT FDAVGKIMLQLLLPFVLGQLLRPWIGAWVHRRKALLKWVDQGSILLVVYTAFSEAVNEG FT LWSNTPIPALLGLLAVCCIILVLAMAGSLLLERLFKFDVADRITLLFCGSKKSLASGIP FT MAQVIFAGQAVGAIVLPLMLFHQIQLMVCAVLATRYGKRPD" FT misc_feature complement(join(214645..214710,214792..214857, FT 214975..215040,215071..215136,215176..215241, FT 215287..215352,215392..215448,215464..215514)) FT /note="8 probable transmembrane helices predicted for FT BPP2473 by TMHMM2.0 at aa 12-29, 34-53, 66-88, 103-125, FT 138-160, 170-192, 231-253 and 280-302" FT misc_feature complement(215461..215550) FT /note="Signal peptide predicted for BPP2473 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.995) with cleavage site FT probability 0.725 between residues 30 and 31" FT CDS complement(215630..216607) FT /transl_table=11 FT /locus_tag="BPP2474" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2789" FT /db_xref="GOA:Q7W7P0" FT /db_xref="HSSP:1R8K" FT /db_xref="InterPro:IPR005255" FT /db_xref="UniProtKB/TrEMBL:Q7W7P0" FT /protein_id="CAE37769.1" FT /translation="MTAPLPVGITMGDAAGIGPEIIAKACAQGLGAPAVVYGDPAIMRR FT ATELLGARLRVLELAAIDQASGQPGCIEVIARGTPLPPDLPVGRVSAAAGQGAYDYLCA FT AIDDARAGRIRAIVTAPLNKKSMQLAGIDQPGHTEILAERTGTRDFAMMLANDELRVLL FT VTIHIPLAAVVAQITPQAELRAIRLADRACRQMGVTRPRVAVAGLNPHAGEDGKFGRED FT IDIIAPAVAQARAEGIDASGPWPGDTVFMRARRGEFDIVVAQYHDQGLIPVKYLGLDQG FT VNVTVGLPFVRTSVDHGTAFDIAWQGIADHASLVAAFDLALAMT" FT CDS complement(216712..218358) FT /transl_table=11 FT /locus_tag="BPP2475" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2788" FT /db_xref="GOA:Q7W7N9" FT /db_xref="InterPro:IPR006596" FT /db_xref="UniProtKB/TrEMBL:Q7W7N9" FT /protein_id="CAE37770.1" FT /translation="MPLPKLPNRPAAILTFPSGDTARAKAARTNSKPAVAGNTDEPLLQ FT PELAGLAPARPVAAPAPAPAPAPAANRPAARPAPARKPRARTDSAARKLFVLDTNVLLH FT DPSSLFRFEEHDIFLPMMTLEELDHQKKGMSEVARNARQVSRSLDSLVQDADNLDDGLA FT LNALGNKDATGRLMFQTTAIHSTLPSDLPMGKADNQILGVVRALQERHPQREVVLVSKD FT INMRLKARALGMAAEDYYNDHVLEDTDLMYSGVTQLPEDFWNKHGKDVESWQQGGTTFY FT RIRGPLCAQFLVNQFVYFEGQMPLYAQVREVSGKTAVLATLRDYTHGKNNVWGITARNR FT EQNFALNLLMNPECDFVSLLGQAGTGKTLLALAAGITQVLETKRYTEIIMTRVTVPVGE FT DIGFLPGTEEEKMLPWMGALEDNLDVLNMGEGEGGDWGRAATMDLIRSRIKVKSLNFMR FT GRTFLNKYLIIDEAQNLTPKQMKTLITRAGPGTKVVCLGNVAQIDTPYLTEGSSGLTFV FT VDRFKGWPHSGHVTLQRGERSRLADYAGDVL" FT misc_feature complement(216727..217767) FT /note="HMMPfam hit to PF02562, PhoH-like protein, score FT 3e-11" FT misc_feature complement(217255..217278) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(218416..218880) FT /transl_table=11 FT /locus_tag="BPP2476" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2787" FT /db_xref="GOA:Q7W7N8" FT /db_xref="HSSP:1E2Y" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q7W7N8" FT /protein_id="CAE37771.1" FT /translation="MTPLIGKPAPLFTAESTIGPVSLDQCQGRAVVLYFYPKDNTPGCT FT TESQDFRDLYEDFLAASTIVLGVSRDSLKSHENFKTKYELPFPLISDADETVCNLYGVI FT KQKNMYGKQVRGIERSTFLIDAYGVLVQEWRGVKVPGHAKEVLQAAKSIG" FT misc_feature complement(218440..218868) FT /note="HMMPfam hit to PF00578, AhpC/TSA family, score FT 3.2e-27" FT CDS complement(218883..219335) FT /transl_table=11 FT /locus_tag="BPP2477" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2786" FT /db_xref="InterPro:IPR007523" FT /db_xref="PDB:3CPK" FT /db_xref="UniProtKB/TrEMBL:Q7W7N7" FT /protein_id="CAE37772.1" FT /translation="MKLHTDPATALNTVTAYGDGYIEVNQVRFSHAIAFAPEGPVASWP FT VQRPADITASLLQQAAGLAEVVRDPLAFLDEPEAGAGARPANAPEVLLVGTGRRQHLLG FT PEQVRPLLAMGVGVEAMDTQAAARTYNILMAEGRRVVVALLPDGDS" FT CDS 219432..220739 FT /transl_table=11 FT /locus_tag="BPP2478" FT /product="putative aminotransferase" FT /EC_number="2.6.1.17" FT /note="ortholog of Bordetella pertussis (BX470248) BP2785" FT /db_xref="GOA:Q7W7N6" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q7W7N6" FT /protein_id="CAE37773.1" FT /translation="MPGGRACARLQGFVALQSCGAPAARGLFPPLFLSPFRIPIMRKFS FT RIERLPPYVFNITGELKMAARRRGEDIIDMSMGNPDGATPQHIVDKLVEASTRPDTHGY FT SVSKGIPRLRKAICDWYMRRYAVEFDPDSEAIVTIGSKEGLAHLMLATLDRGDTVLVPN FT PSYPIHIYGAVIAGANIRSVRMTPGIDFFEELERAVRESIPKPKMMILGFPSNPTAQCV FT DLSFFERVVALAKEHDILVVHDLAYADVCFDGYVAPSIMQVPGARDVAVEFFTMSKSYN FT MAGWRIGYMVGNRELVGALARIKSYHDYGTFTPIQVASIAALDGPQDCVNEIVAQYQRR FT RDVLARGLHEAGWNVEIPKASMYIWAQIPEPYRAMGSLEFTKRVLSDAKVAVSPGIGFG FT EYGDEYVRFALIENEQRTRQAVRGIKDMFRKDGLLK" FT misc_feature 219786..220706 FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 1e-33" FT CDS 220736..222040 FT /transl_table=11 FT /locus_tag="BPP2479" FT /product="homoserine dehydrogenase" FT /EC_number="1.1.1.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP2784" FT /db_xref="GOA:Q7W7N5" FT /db_xref="InterPro:IPR019811" FT /db_xref="UniProtKB/TrEMBL:Q7W7N5" FT /protein_id="CAE37774.1" FT /translation="MNPMKVGLLGLGVVGGGTWAVLARNAEEIARRAGRRIEVNRIAVR FT DVAKARSRVGDGVEISTDGFALVRDPAVDIVVELIGGDTLARELVLEAIAQGKHVVTAN FT KALLAKHGNEIFAAASARGVMVAFEAAVAGGVPIIKAIREGLTANRIEWVAGIINGTTN FT FILSEMRARGLPFADVLAEAQRLGYAEADPTFDIEGVDAAHKLTLLASLAFGVPVQFDK FT AYVEGITQLAQEDIAHAERLGYRIKLLGVTKRRVDGIELRVHPTLVPAERLLANVEGAM FT NAVLVRGDAVGPTLYYGQGAGEEPTASAVVADLVDVTRLHTADPGHRVPHLAFQPDALY FT DLQILSIEEVSASYYLRMRVDDQPGVLADIARILADRSISIGSMIQQPARIGGADIIFL FT THEAVEGNVNQAIEHIEALPFVRSKVTRLRMENLT" FT misc_feature 220736..220804 FT /note="Signal peptide predicted for BPP2479 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.951) with cleavage site FT probability 0.388 between residues 23 and 24" FT misc_feature 220742..221140 FT /note="HMMPfam hit to PF03447, Homoserine dehydrogenase, FT NAD binding domain, score 3e-48" FT misc_feature 220766..220789 FT /note="PS00318 Hydroxymethylglutaryl-coenzyme A reductases FT signature 2." FT misc_feature 221144..221680 FT /note="HMMPfam hit to PF00742, Homoserine dehydrogenase, FT score 1.2e-97" FT misc_feature 221282..221350 FT /note="PS01042 Homoserine dehydrogenase signature." FT misc_feature 221795..222016 FT /note="HMMPfam hit to PF01842, ACT domain, score 1.2e-13" FT CDS 222037..223443 FT /transl_table=11 FT /gene="thrC" FT /locus_tag="BPP2480" FT /product="threonine synthase" FT /EC_number="4.2.3.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP2783" FT /db_xref="GOA:Q7W7N4" FT /db_xref="HSSP:1KL7" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/TrEMBL:Q7W7N4" FT /protein_id="CAE37775.1" FT /translation="MKYISTRGGMAPQSFSDILLEGLAPDGGLAIPEQLPQVDAATLES FT WRGLSYADLAFEVLSLFATDIPAEDLRGLTRAAYRQGVFKSEDIVPVRELGQGLQLLGL FT SEGPTLAFKDMAMQFLGQVFEYVLTRRGTTLNIVGATSGDTGSAAEYALRGKQGVAVFM FT LSPHGRMSAFQRAQMYSLQDENIHNIAVRGVFDQAQDIVKQLAGDLAFKTRYRLGAVNS FT INWARIAAQVVYYFHGWLRAAPKGGEVSFAVPSGNFGNILSGHIARGMGVPIRRLVLAT FT NENNVLEEFFRTGVYRPRGPERTYATSSPSMDISRASNFERFVFDLVGRDPGRVASLWA FT DLARDGSFDLSALKPQFETRYGFVAGASSHADRLQTIRNTFDETGVLVDPHTADGIKVA FT RQFVEPGVPMLVLETALPAKFAETIEAALGRTVPPPADLADLESLPQRVTLMDCDAQAV FT RAFIEAHAKV" FT misc_feature 222256..223212 FT /note="HMMPfam hit to PF00291, Pyridoxal-phosphate FT dependent enzyme, score 1.8e-10" FT CDS 223636..223878 FT /transl_table=11 FT /locus_tag="BPP2481" FT /product="lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2782" FT /db_xref="InterPro:IPR010305" FT /db_xref="UniProtKB/TrEMBL:Q7W7N3" FT /protein_id="CAE37776.1" FT /translation="MSLWRLPMTLKTMTLAFAVTGLGVLAGCSSPSVVQQRDGSQVVTP FT DEPKYNEDTGFYEYEKDGHKVQMNKDDVKTIEEVK" FT misc_feature 223636..223737 FT /note="Signal peptide predicted for BPP2481 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.676 between residues 34 and 35" FT misc_feature 223687..223719 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(223951..224970) FT /transl_table=11 FT /gene="fbp" FT /gene_synonym="fdp" FT /locus_tag="BPP2482" FT /product="fructose-1,6-bisphosphatase" FT /EC_number="3.1.3.11" FT /note="ortholog of Bordetella pertussis (BX470248) BP0868" FT /db_xref="GOA:Q7W7N2" FT /db_xref="HSSP:1D9Q" FT /db_xref="InterPro:IPR000146" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7N2" FT /protein_id="CAE37777.1" FT /translation="MKRKTLTQYLVEQQRSAQALGPEVRLLIEVVARACKAISHAVSKG FT ALGGVLGSLESENVQGEVQKKLDVLSNEILLEANEWGGHLAAMASEEMETIHLIPNRYP FT KGEYLLLFDPLDGSSNIDVNVSIGTIFSVLRAPHRVAGADVCEQDFLQPGSQQVAAGYA FT VYGPQTMLVLTIGNGVVGFTLDREMGSWVLTHESMRIPEDTKEFAINMSNMRHWAPPVK FT RYIDECLAGKTGPLGKDYNMRWIASMVADVHRILTRGGIFMYPWDAREPGKAGKLRLMY FT EANPMGLIVEQAGGAAIDGTGRILDIQPDKLHQRVSVILGSKNEVERVGRYHAEAHAS" FT misc_feature complement(223963..224961) FT /note="HMMPfam hit to PF00316, Fructose-1-6-bisphosphatase, FT score 3.6e-168" FT CDS complement(224980..227688) FT /transl_table=11 FT /gene="pepN" FT /locus_tag="BPP2483" FT /product="aminopeptidase N" FT /EC_number="3.4.11.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP0869" FT /db_xref="GOA:Q7W7N1" FT /db_xref="InterPro:IPR006025" FT /db_xref="UniProtKB/TrEMBL:Q7W7N1" FT /protein_id="CAE37778.1" FT /translation="MRTDTPVTVYRKDYQPYPYTIADVALEFDLDPASTTVRCLMQVAR FT KADARDDAPLVLDGEALELVSIRVDGRDWARDGYVLDDATLTLRGLPPSAAVEIVSRCR FT PAANSTLMGLYVSGGNFFTQCEAEGFRRIAWFADRPDVMSRYRVTLRAAPDYPVLLSNG FT NLLATATLPDGRLQAEWEDPFPKPSYLFALVAGRLTHREERVRTQSGRDVLLQVYSDPG FT SENRTEWALESLRHALRWDESRFGLELDLDRFMVVAVRDFNMGAMENKGLNIFNAAYVL FT ADPATATDANYEGIESVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSADMMA FT RGLDEQAAASARAVKRIDDVVTLRAAQFPEDAGPMAHPIRPDSYQEIGNFYTATVYEKG FT AEVIRMQHTLLGEPGFRAGMDEYFRRHDGQAVTCDDFVAAMESVYAARNPGRDLSVFRR FT WYSQAGTPRVSVKLDHDAQSGRCTVTLTQRCAPVGVEKRAGGDFAKQAFHIPFAIGLLD FT AQGRALPLHLDGQPARDTVLLELTEARASWTFEQVPDMPVPSLLRGFSAPVIVEYDWSD FT ADLALLSAHDTDPFARWEAGQELATREILALTASHQAGQPLAVRPAFIAAWRALLTDPT FT LDAAYRARALALPSEKTLAERMEQIDPPALAVARDFLRAEVGRQLAAPWRAAFDANQTP FT GAYSPAAGPAGRRALKNQALSHLMAAESADAQALAQAQYDQADNMTDSMAALSALVNFG FT APDSAAAALAAFYERWRDDPLVVDKWFTLQATARSTDIDAVRALMAHPAFTLRNPNRAR FT ALVFQFCLNNARGMHRADGRGYDFWAEQVLALDALNPEIAARLARGLDNWARFAEPLRG FT AMQAALAHVRAHAGLSRNVQEIVSKALDLAA" FT misc_feature complement(226492..227646) FT /note="HMMPfam hit to PF01433, Peptidase family M1, score FT 1.6e-56" FT misc_feature complement(226768..226797) FT /note="PS00142 Neutral zinc metallopeptidases, zinc-binding FT region signature." FT misc_feature complement(226912..226953) FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature." FT CDS 227767..228474 FT /transl_table=11 FT /locus_tag="BPP2484" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0870" FT /db_xref="UniProtKB/TrEMBL:Q7W7N0" FT /protein_id="CAE37779.1" FT /translation="MKPSPGAAVEGISGLRPAWRAAVMFSIHAYSRLARLAGLAALLAG FT AALVAGCAAPSVSARVTSFQQWPDGVAGQTYQFAPETGQLNNLEYQSYQDMVRAGIGAT FT GLVEAREGRKARFTVSFRYGSAQTQVMVRRAYDPYFYGGYGGYYGSRWWGGGVGYWGPE FT WVDVPTVAYRNSLSLEIRDTARGGAEVYRSTAYITSGRDDLLGAMPYLVQAIFDNFPGN FT NGSEREIEYPLAR" FT misc_feature 227890..227922 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(228573..228944) FT /transl_table=11 FT /gene="bph3" FT /locus_tag="BPP2485" FT /product="putative DNA-binding protein (histone)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2911" FT /db_xref="GOA:Q7W7M9" FT /db_xref="InterPro:IPR001801" FT /db_xref="UniProtKB/TrEMBL:Q7W7M9" FT /protein_id="CAE37780.1" FT /translation="MPRENYAVLQAKIEKEITKLKRKAEALHTRRRKPVIASIVKSMRE FT YNITPEEIAAAFGSAKSVRAPSTPVRRKAGAPVAKRAVAPKYRHPQTGETWSGRGKAPR FT WLAAEEAAGAKRDSFLIRD" FT CDS 229069..229899 FT /transl_table=11 FT /locus_tag="BPP2486" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2910" FT /db_xref="GOA:Q7W7M8" FT /db_xref="HSSP:1EMS" FT /db_xref="InterPro:IPR003010" FT /db_xref="UniProtKB/TrEMBL:Q7W7M8" FT /protein_id="CAE37781.1" FT /translation="MTGDPRTDTTPSCRVAAIQMVSGPDVDENLAQAAELIGKAAQDGA FT RLVALPEYFCFMGHTDTDKLAIKEESGYGKIQSFLSNISSQYGIWVAGGTLPLTSPDPQ FT RVFNTTFVYGPGGQPAARYDKIHLFNFQRGAESYDEAIAIRPGKEVQVFDGPCGRVGLS FT VCYDLRFPELYRAMGTVDLILVPAAFTYTTGQAHWELLLRARAIENQCYVLAPAQGGRH FT PTGRRTWGHSMLVDPWGQVLDVLPEGPGVIGGTIEAARLAEVRASLPALRHRVL" FT misc_feature 229102..229893 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00795, Carbon-nitrogen hydrolase, FT score 1.5e-69" FT CDS 229910..231370 FT /transl_table=11 FT /locus_tag="BPP2487" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2909" FT /db_xref="InterPro:IPR002510" FT /db_xref="UniProtKB/TrEMBL:Q7W7M7" FT /protein_id="CAE37782.1" FT /translation="MKLIDPAISALATAKTLLLDPWGLTEADLARALGEIFTHKVDYAD FT LYFQYTRSEGWSLEEGIVKTGSFSIGQGVGVRAVSGEKTAFAYSDSLSADALLSSARTV FT RGIARQGAGKVKVAAQVPPVDGRSLYADIDPLVTLTAADKVALLERIERMARARDPHVI FT QVMAGLGAEYDVVLVAGSDGRLAADVRPLVRLSLTVIAERNGRREMGHAGGGGRTGLAY FT FTDDILRDYVERAVHEALVNLEARAAPAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRK FT GSSVFSDRIGERVASSGVTVIDDGTLPDRRGSLNIDDEGNATQRNVLIEDGILRGYMQD FT TLNARLMKTAATGNGRRESFAHLPMPRMTNTYMLGGATPPEEIIASVKRGLYAVNFGGG FT QVDITNGKFVFSASEAYMIENGKVTYPVKGATLIGNGPDAMNRVSLIGNDMRLDSGVGT FT CGKDGQSVPVGVGMPTLRMEGLTVGGTA" FT misc_feature 230033..230920 FT /note="HMMPfam hit to PF01523, Putative modulator of DNA FT gyrase, score 1.2e-81" FT CDS 231627..232700 FT /transl_table=11 FT /gene="aroG" FT /locus_tag="BPP2488" FT /product="phospho-2-dehydro-3-deoxyheptonate aldolase, FT Phe-sensitive" FT /EC_number="2.5.1.54" FT /note="ortholog of Bordetella pertussis (BX470248) BP2908" FT /db_xref="GOA:Q7W7M6" FT /db_xref="HSSP:1GG1" FT /db_xref="InterPro:IPR006218" FT /db_xref="UniProtKB/TrEMBL:Q7W7M6" FT /protein_id="CAE37783.1" FT /translation="MSHNTDDFRIREIKELNPPAHVMREFPCSKDVSEIVYAARQGMHR FT ILHGMDDRLIVVIGPCSIHDTKAALEYADRLKPVRDRLAADLEVVMRVYFEKPRTTVGW FT KGLINDPDLDGSFDINKGVRVARELLLDINSRGLPAGCEFLDMITPQYIADLVSWGAIG FT ARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVS FT TAGNEDCHVILRGGKAPNYDAASIEAACQDMAKAGLAQRIMIDASHANSSKKPENQPLV FT VDDVANQIEQGDARIVGLMIESHLLGGRQDLVPGQALTYGQSITDGCIDWDASVQVLER FT LAHAVRERRRASLSAGK" FT misc_feature 231687..232664 FT /note="HMMPfam hit to PF00793, DAHP synthetase I family, FT score 2.1e-154" FT CDS complement(232722..245378) FT /transl_table=11 FT /gene="fhaL" FT /locus_tag="BPP2489" FT /product="adhesin" FT /note="ortholog of Bordetella pertussis (BX470248) BP2907" FT /db_xref="GOA:Q7W7M5" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/TrEMBL:Q7W7M5" FT /protein_id="CAE37784.1" FT /translation="MFASRPGPLSYVELLYSPSGCMNKHCFKLVHSPALGMLVPVHEHR FT TGRPLRGARRAMAVTLAVLAPAGAAAAAGGIAPQGATQVAPARNGVPVIRIAAPDATGI FT SHNRYTEFNVRQPGVVLNNSTAEGVSALAGRISGNPGLRGPARAILNEVTGVSPTTLEG FT ALEVFGPAADVLVANPNGLTANGLSTINIRGLTLSTGRPGAGGVLDVARGRLEIGPHGV FT NTTGLSYFDLVARTVALHGPVGAGDGQPPADINVVAGANRYDYGRRTRLQPTGRPAAAP FT DASAGHAIDGSAAGAMYGRHITLVSSDAGLGVRHRGLVSAAGHIAIDAAGGVSVQALAA FT HAASDGTAGSATIRAGGDALIGSVIAFGGDIEVRAAAGRIATHGALNAPRGRVRLQAGD FT ALAVHGPVQAARVALATRGDASIAADLHATRDGVSLAARNATLAHARVIATPPAAQARP FT STPAIDIALSGTLTLRGTLHGADGDGRRIEGTSVALADGMPVIVDTRQPQRAVPNALLA FT SDAGLYAAGQPISIRAAGLRNEGGAIDSTGTGQGHIGLRIGGPAVNLGYIATHGTLEAT FT VDGTLENRMLLSAAALRVATHDLSNHAAMTASGPDTGTPALDLSVQHRVDNAGSLLAAR FT GALRLRGGAELSIVNQPAGFMLAHGQDIAAARLANAGTLSSTAAGTLTLAGDLENSGML FT QSAHALRVQARRIASRGRLATATDGAGLTLAADKNLTLAGRTSSAGALLARAGAALVNE FT GIVTARQDLSWRARDIVNDAAGDVVARSVDMRAGQGFDHRGAIGSVTDLVLKAARIDSA FT GVLRANQDIDMHADDAMRLTAGARTLAGRDLALAADQLEQSGMAQAGRTLTATAGALEN FT DGLLDAADAKLRTTRAFVNRGQIQADMLQAQGPQIRNAGVLRTGALLALQAAGRLENTG FT GMAASGSLSIAAAGPFANSGTMGANGDASFALSSFANTGSISVGGDLALRLPDVELTLD FT ADHRLPVSQGTTLLQVASLDNRARSETPGRLSVQARGAIRNQDTLAAGQGLWLESAAND FT IENGAGALLWSGADLRLRGTRIINREAAIIESAAGMVLDARAEIDNGLGIIRAGGDLWA FT DAPLLRNSGCLGGRIVPAGDAAIGGGTYDHYHSAAVVWHELFTAGAAGIRVPRYDGKDV FT RVAQSVVQAGGNLHLNQGEQKGRQARVSNQGRIEAAGMALVDGNVDNASLHLSLSVDEY FT LRRPLAAPIVLRATDSRAQHVIPAFWKFHTLYEFLDFLLSNNEPRYIWGYYRTWPEWAF FT QTLRNLDLGYAGAPDPTAPPVPRPPVLDPQAKASTTPAAQALVAQYHKDLAEYATALEA FT AQRAEAIRTARQRVNGALRARYGEKLAQLETRTPEVDAAVAALAQTIFDARAKPAAEVE FT KLIAAALCSPRAQACAAGTARIAQLLDQASLPPRRPAVALFAQAMAAVLGPDWRGPVGH FT ATLMARYADFKRRVATQGRAAGGELAFYPAQQTVLAGGAGLVLSGGRVTNGENVAGLLA FT RNMTVHIGEQRIETPRGSIDAIRHPDAGPAVTVKDSIHALLENRRLFARTAPARAAAGP FT GGPDVPATPPGLPQPLYETRLSYLDQSHYYGSQYFFDLIRYRPDRPLRTIGDNYFETRL FT IREQIARAMGGHEYRNAVRGLALVQSLMDAAPLAAAELGLRVGQAPTAEQLARATRDFV FT WYVRETVDGQEVLVPRVYLTRATRTAASATREAGGALMASAGTVLADTGGATIESGNAA FT FLGKDVILDAAGGAVRLINDKGIAGGARALGTLAIRGGDIAIQGGLLDAAQAYLTGERV FT SLAASARYDAHGRLVSRHDARLNGRADAAGLLYIAAKRLDSAGATLSGDHVRLEADKVR FT LGGLYDVDSSYSQTSRYGLGKAWWLLSSQTETATASHARFQGTTLEGAILSGRATDMDI FT EGGSARFQQTDLQVAHDFKARAAADYAYAERAKRVDQLFLRLSAGAGGYEADIDLSAQG FT GLQAHAGRGQTAGAHTSAGFESTREYERSRMTHYRNADLNFGAGLLAVGNTADLGGADI FT NRDRYGQGASTASDAIPGDLLRIRAARVAATKYLDVTDSLTASSYLRASIDGALTSSVA FT TAATRLGDTLAEARQENSQVHAGQMALQMAGEATQLATADTAALSISATFAAGYADSHR FT NTQTENTNYFGGNLDIRATEQDIDLAGTKFSGADWLALSARRDINARAAASRYQESSEQ FT HDLQLHQTINAGANAMQAAAGVGVTAGLSGSHMVRHGAGQTYEGSALRAMQLHLQARDL FT NLDASMAQATRMDLHVARDLNAISRQDEQRFAQTGGNWEVSLGAAIQNRTLVAPVGTIG FT AGVRHEHDYQALTQNGQAGLLASQGLRATVGRDARLRGAIIADASNQGGMDIAGRIHAE FT ALHDYRDKDGFETGASVGISSTTLNPTLSLTLGRPAVEQYRALRQATIAMGAAPGAPRY FT TARGGVSGRLNTDSGQAVVVQRAERWASARTEFSFDQPSRRDKADSGSPGARPAHPGAA FT KAPALPLARPLTSVLAGPSSTSPTANPAAAPGIAAQPAPASPGRDAPKPDPYANRVIVQ FT LAQDDVATQAAQALFHKHAEQSDWYRQADDGSLHPVHPLRAAAAGPTKIQLVGHGSADR FT QALSGHDGHAVAGIVQQLRERLPPAAALAKVALVGCDTDCASGASLRGDVAQRLAADGA FT QPAPAVSGYIGRLEVDAAGRKHAVAQGGLGDVDPEARAQGTQPVPRVFSHGPVNIAQSG FT QARQLVIDGHGSWVRPDRAVAPSYSGTVRLPAGTRMHFYSDDGQMVSAIPLRNIPDNPE FT RAWRAQPFSERISAERIRRVANAAKVPFDVARQGFETSTQVREIAAPGTAVKNYLLTPI FT DPQRDAALAFHQSRSQADVDLASAAPGKGALLSDLLLAVAASGYSYPLIHYTCCREEFQ FT RPGSDTPSPQLPPHELLIRSWLASSAPVHALPLPPSSRGTLPGADPYALRSIVQLGTDA FT ATARAAAALHGKHPANSNWYLQTRDGGLEPVRQAAGPAAGPHKVQFVGHGDVYHGVPLL FT GGNAAATLADLLNQVEQHSPAGARLDKIALVGCDTDCTGRPSLREPFRQSLAARPDAPA FT LTVTGYIGRIDVDSAGRKRRVATGGLGDRPPADEPASPRPPAQPAAPGPGAATPSSAPS FT APVAARLFTHGPITLSQSENARQLLIQGHSGWTRPPAGTSGAGEIPAGWLRLPSGTRMH FT FYSVDNQQTSGVPVQAIPRNPELAWLGRPFVREFPASVIRQFAHARQAPFDVARAALVE FT STRVQEVAAAGALVKNYRLAPAIDPLVTGVEQFHAQRRQGDVDMAVARERASLSDVLAA FT VEASGHHYPLLHFTCCRGETAPPGAPPDAVAPPLAPVSARYLQQWRERSGVAQPRPPTP FT LGAEPPVHGPDRYGHRTIVQLGSDALTETAARRLFRKHAGNASWYSQDASGQLTQVRAP FT AAPAIGPQKIQFVGHGSILEGMPLLGGNNAAQLARMLPAIRQGLPATARVEKITLVGCN FT TGCASRASLRNLLNHYLITTAGLSAEVKGYAGRVDVDAAGHKQIVEQGGLGNTPPPEAA FT PAPRVFRHGNVTLSQSGEARQLTIVGHGFWPRPGPADQPDGASPPGWVRLPANTSMYFY FT SRENQLVGGLPSQAALRAPMLAAQGQGAAELFSRAVIRGFAHRHQLPFDVARHTLVGAT FT RPQDIGEPGALIKDYVVSPAPETGLGVIEDFHAARQQPDMDLAQAAPGSEIRLSEILQA FT VAQSGVRYDLIHYACCRAEIPATDTPTQQVATPVPAPDKLVMQQWHSGAGAARPPSPQA FT QAQAPYGPDRYAHRVIVQLGSDTVTESAARRLFRKHAATSLWYGQTLEGTLMLKQGDDT FT PAAGPLKIQFVGHGGPRYSMPLLGGNTPAELAQMASTIQHAGPPSQLEKVTLVGCQTDC FT VARPSLRKLFSTALATEHGLTPAVTGYAGRVDVDAAGRKRIVEQGGLNEPRAQAGASTA FT APNRIVQSVAHGVALSQSGQARQLVVLAHGGWKDKTTSRYLRRVRGDGYTELPANTRID FT YYTEDGMPTKGFAVCQEVTARANDAYTGLQPALAISPTDLEALARMRNTSPQALTDAML FT ASAVGRRESLIGAATMKDYALYYHEQFALDFLRRHNADGSSADVDLAIITEPTHKRHLS FT DVLKAAKESGAHYDVVHFGACRVGRCRNAAAEMGASATSHPSP" FT misc_feature complement(239688..239750) FT /note="PS00079 Multicopper oxidases signature 1." FT CDS 245508..246917 FT /transl_table=11 FT /locus_tag="BPP2490" FT /product="putative oxidoreductase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2906" FT /db_xref="GOA:Q7W7M4" FT /db_xref="InterPro:IPR006094" FT /db_xref="UniProtKB/TrEMBL:Q7W7M4" FT /protein_id="CAE37785.1" FT /translation="MNAPQPAEALRRPVPPACLDALKARFGDRLSMAHAVREHHGRDES FT PYPPMLPDAVVFAHSTEDVAEVARLCNEHRVPLIPYGAGSSLEGHLLAIQGGISLDLSQ FT MNQVLAVNAEDLTVTVQAGVTRKQLNEEIRDTGLFFPIDPGADASLGGMAATRASGTNA FT VRYGTMRENVMALTVVTADGRVLRTAGRARKSSAGYDLTRIFVGSEGTLGIITEVTVRL FT YPQPEAVSAAICNFPNLDAAVQSVIEIIQMGVPVARVEFMDEASVRAVNMHSKLTLRET FT PLLLFEFHGSPAGVQEQAETVQAITAEHGGMDFEWAERPEDRSRLWTARHNAYFAGLQL FT RPGCRASTTDVCVPISRLADCVRETVDELERASFPYTIVGHVGDGNFHVLMLLDADSPQ FT EWQKSETINHNLVRRAIAADGTCTGEHGVGLHKMQFMAEEHGEEALALMRSLKHAFDPN FT NILNPGKIIAW" FT misc_feature 245661..246140 FT /note="HMMPfam hit to PF01565, FAD binding domain, score FT 7.1e-68" FT misc_feature 246180..246905 FT /note="HMMPfam hit to PF02913, FAD linked oxidases, FT C-terminal domain, score 1.1e-87" FT CDS 247052..248551 FT /transl_table=11 FT /gene="glcD" FT /locus_tag="BPP2491" FT /product="glycolate oxidase subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP2905" FT /db_xref="GOA:Q7W7M3" FT /db_xref="InterPro:IPR006094" FT /db_xref="UniProtKB/TrEMBL:Q7W7M3" FT /protein_id="CAE37786.1" FT /translation="MNTLVDAGFSPRREGFAPQPLIEALLSILPAHCVLHREEDTRPYE FT CDGLSLYRALPAVVALPEDEAQVRAIMQLCKRMNVPIVARGAGTGLSGGAMPHAQGVLL FT GLSKLNRIKRIDPAGGTAVVEPGVRNLAISEAAAPYGLYYAPDPSSQIACSIGGNVAEN FT SGGVHCLKYGLTVHNVLRVRVVTIDGEIVELGSEAPDAPGLDLLSVFVGSEGMLGVVTE FT ITVKLIPSPACAQVVMASFASVEAVGNAVTQIIAAGLIPAGLEMMDRQAVHMVEPFVQA FT GYDLQAQAILLCEADGTPQEVAHEVAMMEAVFKRAGATRLQVSGSEAERLRFWAGRKNA FT FPAAGRVSPDYYCMDGTIPRRHLARVLGAIEQMEDDFGLRCANVFHAGDGNLHPLILFD FT SNKPDEVECAEKFGAAILELCVQVGGTVTGEHGVGMEKINQMCVQFSRDELDAFLAVKR FT AFDPPGLLNPEKVIPTLARCAEYGKMHVHAGEMRFPDLARF" FT misc_feature 247217..247699 FT /note="HMMPfam hit to PF01565, FAD binding domain, score FT 5.2e-59" FT misc_feature 247739..248464 FT /note="HMMPfam hit to PF02913, FAD linked oxidases, FT C-terminal domain, score 2.8e-67" FT CDS 248675..249670 FT /transl_table=11 FT /gene="glcE" FT /locus_tag="BPP2492" FT /product="glycolate oxidase subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP2904" FT /db_xref="GOA:Q7W7M2" FT /db_xref="InterPro:IPR006094" FT /db_xref="UniProtKB/TrEMBL:Q7W7M2" FT /protein_id="CAE37787.1" FT /translation="MTPQDGHCLLDMTPYRGIVSYQPSELVVTARAGTPLAELEAALAE FT HGQMLAFEPPHFGPGATLGGCVAAGLSGPRRMAAGAVRDFVLGARLLDSQGHILAFGGE FT VMKNVAGYDVSRLQAGAQGIFGALLEVSLKVVPRPAVVESLRLPATQDEALRWFGQWRG FT RPLPISASCWTADGAADGGGAVVLRLAGAPPAVQAAREVLGGELLDAAQAHDWWESLRE FT QSHVFFDRGMPLWRLAVPPTAPALALGPTLIEWGGGQRWLSGHYDAQAVRAAAAQAGGH FT ATLFRAAGRAAPADGVFHPLSDGVAAITRRLKQELDPAGLFNPGRLVPEL" FT misc_feature 248681..249046 FT /note="HMMPfam hit to PF01565, FAD binding domain, score FT 1.4e-07" FT CDS 249703..250932 FT /transl_table=11 FT /gene="glcF" FT /locus_tag="BPP2493" FT /product="glycolate oxidase iron-sulfur subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP2903" FT /db_xref="GOA:Q7W7M1" FT /db_xref="InterPro:IPR012257" FT /db_xref="UniProtKB/TrEMBL:Q7W7M1" FT /protein_id="CAE37788.1" FT /translation="MQTNLASWARDTDFGEEADAILRRCVHCGFCTATCPTYQVLGDEL FT DSPRGRIYLIKQLLEGSEPTQATQQHLDRCLTCRNCETTCPSGVEYGRLVDIGRQLVHE FT RVPRRLGDRLRREALRRGMNSAWFGPAMRLGQMVRAMLPQALRRKVPAARPPGLLPDPS FT RHERQVLMLTGCVQPSMMPTIDAATLRVLDAIGIGARLAPGAGCCGAVNFHLDAQGEAL FT AQMRANVDAWWPWVERGEIEAIVMNASGCGAMVKEYAHHLRRDPDYAERAARIVALVKD FT VAEVVAPHAAALRERLAPGPRAAFHPPCTLQHWQGLRPLAERLLVELGFELAPFGESHL FT CCGSAGAYSVLNPDIALTLRDRKLGEIAAAAPTVIMSSNIGCIGHLQSGTDTPVRHWIE FT VVDQRLATQG" FT misc_feature 249754..249825 FT /note="HMMPfam hit to PF00037, 4Fe-4S binding domain, score FT 0.034" FT misc_feature 249775..249810 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT misc_feature 249904..249975 FT /note="HMMPfam hit to PF00037, 4Fe-4S binding domain, score FT 0.016" FT misc_feature 249925..249960 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT misc_feature 250276..250470 FT /note="HMMPfam hit to PF02754, Domain of unknown function FT (DUF224), score 0.00051" FT misc_feature 250675..250863 FT /note="HMMPfam hit to PF02754, Domain of unknown function FT (DUF224), score 2.4e-09" FT CDS complement(250923..251834) FT /transl_table=11 FT /locus_tag="BPP2494" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2902" FT /db_xref="InterPro:IPR000801" FT /db_xref="UniProtKB/TrEMBL:Q7W7M0" FT /protein_id="CAE37789.1" FT /translation="MATALLPRRAAPWLLAAALLPAASRAQPAAVPSEPPERARARLGV FT LGLVQQTVLARGGGLRNVRLTVAVPAGQPPAAGWPVIYMLDGDAALQALAQANRADLAR FT QAVLVGIGYDSPGRIDGQARAWDYTPALPGTGVHGTPDPRSPQRRNGGAEAWLEFIETR FT VKPWVAGTTRVDTGRQTLYGHSYGGLFVLHTLLARPQTFQRYVAASPSLWWHAPYMMRR FT ASDAGDFSHGAPTLHLMAGGAEMLRRPGAAPLATAGATTRLAAILAAKPGLSVTLREFP FT GLSHGAMLPASAQAAAELAAQP" FT misc_feature complement(251757..251834) FT /note="Signal peptide predicted for BPP2494 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.929 between residues 26 and 27" FT CDS complement(251837..254050) FT /transl_table=11 FT /gene="bfeA" FT /locus_tag="BPP2495" FT /product="ferric enterobactin receptor" FT /note="ortholog of Bordetella pertussis (BX470248) BP2901" FT /db_xref="GOA:Q7W7L9" FT /db_xref="HSSP:1FEP" FT /db_xref="InterPro:IPR010105" FT /db_xref="UniProtKB/TrEMBL:Q7W7L9" FT /protein_id="CAE37790.1" FT /translation="MSTPRFALHYASASVLLAASGLAMAQTATQIHDPSQVQQMATVQV FT LGTAEEEIKESLGVSVITAEEIARRPPTNDLSDLIRREPGVNLTGNSASGARGNSRQVD FT IRGMGPENTLILIDGKPVTSRNAVRYGWNGDRDTRGDTNWVPAEEVERIEVIRGPAAAR FT YGSGAMGGVVNIITKRPADRATGSITYYTNQPEDSREGNTNRVNARISAPISDTLSMRL FT YGNYNKTNPDARDINAGHANTSDNGNPSTAGREGVINQDLSALFSWKADSRNTVDLDMG FT FSRQGNLFAGDTMNNANSDFSDSLYGKETNAMYRENYALTHRGVYDWGTSRASVGYDYT FT RNARQREGLAGGPEGAPTAGGYDTARLKNWRAAAEASVPFHLGFEQVATVGVEWLRESL FT EDPAGTRQTYTGGAIGGTAPADRDPKSRQTSSALFAEDNIEIDERTMLTPGVRLDHNSE FT FGSNWSPSLNASYAVTDALKLKGGIARAYKAPNLYQSNPNYLLYSRGNGCLASQANTNG FT CYLVGNEDLSPETSVNKEIGFEYDPGTWRTSMAYFRNDYRNKIVAGTDVQYRLANGARV FT LQWTNSGKAVVEGLEGNLFIPLASNLDWNTNFTYMIQSKEKATGEPLSVIPEYTINSTL FT DWFYTPQLSFQANLTYYGKQEGPSTNVRTGVELNGDGRQTISPYALAGLSMGYEVNRNL FT KFRVGVSNLFDKQLYREGNASSAGAATYNEPGRAYYATATVSF" FT misc_feature complement(251843..251893) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="PS01156 TonB-dependent receptor proteins signature FT 2." FT misc_feature complement(251843..252190) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00593, TonB dependent receptor FT C-terminal region, score 1.2e-30" FT misc_feature complement(253976..254050) FT /note="Signal peptide predicted for BPP2495 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.998 between residues 25 and 26" FT CDS 254205..255242 FT /transl_table=11 FT /locus_tag="BPP2496" FT /product="putative transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2900" FT /db_xref="GOA:Q7W7L8" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q7W7L8" FT /protein_id="CAE37791.1" FT /translation="MHYRHSFMTQTPPRAPRGGAGAGAALVAGQTLIDLSRHSAARYYL FT SVPGKERPVFQGVFDTSEVAPGVVVHRVDIRDLQGAAVRAELKPGLRLALTIGGSADVS FT IGHCRLPRGPQGGDGVQGALVAVAAPATFARQSRRGDIERTVSLAFSHDWLARRLGADG FT AALAAFAQRHLAMHCWPASAQAITLAEQMLRPPALAPALWRLYLESRALDLLVEGFDGL FT EAGAGAAPQAGRGGLARRDFLRMARIRELLESGEADAWSLEEIARHACLSVNTLQRHFR FT AAWGMTVFECLRGARLTRARLGLERDGLSVAQAACLAGYTSAANFATAFRRAFGVTPGQ FT LRARG" FT misc_feature 254946..255083 FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family, score 3.5e-05" FT misc_feature 255090..255218 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 255102..255233 FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family, score 1.1e-06" FT CDS complement(255286..256722) FT /transl_table=11 FT /gene="pntB" FT /gene_synonym="nntB" FT /locus_tag="BPP2497" FT /product="NAD(P) transhydrogenase subunit beta" FT /EC_number="1.6.1.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP2899" FT /db_xref="GOA:Q7W7L7" FT /db_xref="HSSP:1E3T" FT /db_xref="InterPro:IPR004003" FT /db_xref="UniProtKB/TrEMBL:Q7W7L7" FT /protein_id="CAE37792.1" FT /translation="MISLNLVTLFYLIASVCFIQALKGLSHPTTSRLGNTFGMVGMAIA FT VLTTAALIIALARDGAGPGLGWVLLGLLIGGSAGTLMAKRVEMTKMPELVAFMHSMIGL FT AAVAIAVAVVAEPHAFGIATAGGLIPTGNRLELFIGTFVGAITFSGSVIAFGKLSGKYK FT FRLFQGAPVVFPGQHLLNLALALLMLGCGLWFMATQAWPPFVIMTVLAFALGVLIIIPI FT GGADMPVVVSMLNSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCKAMNRSFF FT NVLLGGFGGQAGTAAAAGDGQQRSVKSGSADDASFLMANAESVVIVPGYGLAVARAQHA FT LKELATKLGEKGVQVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMDDINGEFGQTDV FT VLVLGANDVVNPAAKNDPASPIAGMPILEAYKARTVIVNKRSMAAGYAGLDNELFYMDR FT TMMVFGDAKKVLEDMVKAVE" FT misc_feature complement(255292..256710) FT /note="HMMPfam hit to PF02233, NAD(P) transhydrogenase beta FT subunit, score 2.9e-258" FT misc_feature complement(join(255715..255780,255826..255882, FT 255922..255987,256048..256113,256135..256200, FT 256261..256317,256378..256443,256474..256539, FT 256555..256611,256657..256716)) FT /note="10 probable transmembrane helices predicted for FT BPP2497 by TMHMM2.0 at aa 2-22, 37-56, 61-83, 93-115, FT 135-154, 174-196, 203-225, 245-267, 280-299 and 314-336" FT misc_feature complement(256645..256722) FT /note="Signal peptide predicted for BPP2497 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.613) with cleavage site FT probability 0.332 between residues 26 and 27" FT CDS complement(256719..257036) FT /transl_table=11 FT /gene="pntAB" FT /gene_synonym="nntA2" FT /locus_tag="BPP2498" FT /product="NAD(P) transhydrogenase, subunit alpha part 2" FT /EC_number="1.6.1.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP2898" FT /db_xref="GOA:Q7W7L6" FT /db_xref="UniProtKB/TrEMBL:Q7W7L6" FT /protein_id="CAE37793.1" FT /translation="MESISPTLINLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAISA FT IIIVGAMLAAALTEGGLARTMGVVAVALAAVNVFGGFLVTRRMLEMFKKKERKPGAEGA FT Q" FT misc_feature complement(join(256785..256850,256866..256922, FT 256959..257024)) FT /note="3 probable transmembrane helices predicted for FT BPP2498 by TMHMM2.0 at aa 4-26, 38-57 and 62-84" FT CDS complement(257038..258156) FT /transl_table=11 FT /gene="pntaA" FT /gene_synonym="nntA1" FT /locus_tag="BPP2499" FT /product="NAD(P) transhydrogenase, subunit alpha part 1" FT /EC_number="1.6.1.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP2897" FT /db_xref="GOA:Q7W7L5" FT /db_xref="HSSP:1PTJ" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W7L5" FT /protein_id="CAE37794.1" FT /translation="MQIGVPKETRDGETRVAATPETVKKYIGGKHSVIVERGAGVAAHY FT PDSAYEEAGATLGTAETALGCELVLKVRAPADNELPHMKRGAVLAGMLDPFDADGLQRL FT AAAGLTAFALEAAPRITRAQSLDVLSSQANLAGYKAVLLAANYYGRLLPMMMTAAGTLK FT AARVVVLGAGVAGLQAIATARRLGAVVEASDVRPAAKEQIESLGAKFIDVPFETDEERE FT IAQGVGGYARPMPPAWMARQAELVAQRCKQADIVITTALIPGRPAPTLLTAETVQAMKP FT GSVVVDLAVERGGNCPLTQKGLVADHHGVTLVGLTNLPGMLPTDASALYARNLLDFLKL FT IVDAEGALAIRRDDEIVTACLMCEGGQVTRRS" FT misc_feature complement(257098..258147) FT /note="HMMPfam hit to PF01262, Alanine FT dehydrogenase/pyridine nucleotide transhydrogenase, score FT 5.7e-28" FT CDS complement(258411..259286) FT /transl_table=11 FT /locus_tag="BPP2500" FT /product="putative hydrolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP2896" FT /db_xref="GOA:Q7W7L4" FT /db_xref="InterPro:IPR007709" FT /db_xref="UniProtKB/TrEMBL:Q7W7L4" FT /protein_id="CAE37795.1" FT /translation="MFITQPLSYRLDLPTEYPHAQSSAPLVLDSPHSGAAYPPDFAPSV FT SAGALRTAEDTWVDDLWGDAVGLGVPLIAASFPRSYIDANRAVDEIDPLLLAQPWPEAI FT NESPKVKLGKGLVWRMLDDGTPLYDRKLSVDEVRHRIEACWKPYHRALGAVLDQAHARF FT GKVWHINCHSMPSVAGAFATDQPGLVHPDFVLGDRDGSTSDSAFREFVAAWLRERGYDV FT SVNDPYKGVELVRAFGRPADGRHSLQIEINRKLYMDEVSLRPNDNYPRLKAHLRELTAA FT LVDWTRAQAA" FT CDS complement(259345..260331) FT /transl_table=11 FT /locus_tag="BPP2501" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2895" FT /db_xref="GOA:Q7W7L3" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W7L3" FT /protein_id="CAE37796.1" FT /translation="MQRRNVILGLSLAAILAAPLAAGVAHAQDAYPNKPIRLIVPFPPG FT GTTDIVGRLFADKLSKELGQTVVVENRGGAGGSIGSAFVASSVPDGYVLGIATVSTHGI FT NPAIYTNLPFDAEKDFTPISNLAAVPNIMVVNPKVPAKNIEDFIKLAKSQPGKLTYASA FT GNGSVSHMMGEMFKMASGTDLMHVPYRGVGPALNDTLAGQVDVLYDNLPSSLPHVQSGA FT LVPLAVAAPQRVAALPNVPTFAEAGLQPVNDSSWFGLVAPAKVPQPVIDKLYAAVVKVS FT AEDDVKKRLEGLGAAPVANTPAEYAKQISEEIAKNKRIAKEANVKID" FT misc_feature complement(259357..260181) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.2e-107" FT misc_feature complement(260251..260316) FT /note="1 probable transmembrane helix predicted for BPP2501 FT by TMHMM2.0 at aa 5-27" FT misc_feature complement(260251..260331) FT /note="Signal peptide predicted for BPP2501 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 27 and 28" FT CDS 260503..261423 FT /transl_table=11 FT /locus_tag="BPP2502" FT /product="putative LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP2894" FT /db_xref="GOA:Q7W7L2" FT /db_xref="InterPro:IPR000847" FT /db_xref="UniProtKB/TrEMBL:Q7W7L2" FT /protein_id="CAE37797.1" FT /translation="MRRFCPSLTDLQAFEVAARHNSFTRAAQELCVTQGAVSKQVKHLE FT EFVGVELFLRIRQGLVLTEAGRSYLKKIRAGLGQIEAATLELIAHQGRGGTLHLTAMLT FT FGARWLIPRLAAFRRLRPDIHVEFLPHRQGYDFSTPELDAAVRFGEGIWPGSGADYIVG FT RDVVPVCSERLVPGGCQDAADLLAYPLLHHTSAMEGWREWFEQAGCDTRRSLEGARFDQ FT YSLLSQAAAAGFGVALIPRCLIEDELRDGKLHVPIQLPIRARQGYYLCYPEQKASSPTL FT QAFRGWLMEVSSEAEPRPDQLAAAV" FT misc_feature 260524..260703 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1e-24" FT misc_feature 260566..260658 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 260770..261381 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 5.1e-33" FT CDS 261436..262551 FT /transl_table=11 FT /gene="trmU" FT /locus_tag="BPP2503" FT /product="tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase" FT /EC_number="2.1.1.61" FT /note="ortholog of Bordetella pertussis (BX470248) BP2893" FT /db_xref="GOA:Q7U375" FT /db_xref="InterPro:IPR018318" FT /db_xref="UniProtKB/Swiss-Prot:Q7U375" FT /protein_id="CAE37798.1" FT /translation="MPSNPTRKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWED FT DDDSEYCSTRQDLLDAASVADLVGVEFEYVNFAAEYKDRVFAEFLREYSAGRTPNPDVL FT CNAEIKFKAFLDHAMALGAEHIATGHYARVRTVETPAGPRHQLLKALDDTKDQSYFLHR FT LNQAQLARTLFPLGELRKTEVRRIAHEIGLHNAAKKDSTGICFIGERPFREFLNRYLPS FT EPGPILTPEGQRVGTHHGLSFYTLGQRKGLGVGGVKGRQRDDGTAEAWYAARKDLARNV FT LYVVQGHDHPWLLSAQLQAQDASWIAGEPPAAGAYGAKTRYRQVDAACRLDQAGGERFA FT LAFEQAQWAVTPGQSAVLYDGEVCLGGGIII" FT misc_feature 261460..262545 FT /note="HMMPfam hit to PF03054, tRNA methyl transferase, FT score 1.5e-181" FT misc_feature 262504..262539 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT CDS 262652..263470 FT /transl_table=11 FT /locus_tag="BPP2504" FT /product="putative integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2892" FT /db_xref="GOA:Q7W7L1" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:Q7W7L1" FT /protein_id="CAE37799.1" FT /translation="MDVVMLICLLALGAVVGFAAGLLGIGGGMLLVPFLTMLFAWQGMP FT GDLVVHAAIATSMTSILFTSVSSVRAHQKRGTIQWSIVWAMAPGIIIGGLLSGGAVFAA FT LSTAWLSLFFALFVGYSGWNMLRSKKPKASRQMPGIVGTSAAGAGIGFLSGLVGAGGGF FT LSVPFMVWCNVALHTAVSTSAALGFPIALANSVGYVISGLNESVTRPGMLGYIYWPALL FT ALVATSVLTAPLGARMAHRLPVGTLKRVFATLLFALAAYMLTKAWQAFMV" FT misc_feature 262652..262708 FT /note="Signal peptide predicted for BPP2504 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.995) with cleavage site FT probability 0.683 between residues 19 and 20" FT misc_feature join(262670..262738,262796..262855,262889..262957, FT 262970..263029,263087..263155,263183..263251, FT 263288..263356,263399..263452) FT /note="8 probable transmembrane helices predicted for FT BPP2504 by TMHMM2.0 at aa 7-29, 49-68, 80-102, 107-126, FT 146-168, 178-200, 213-235 and 250-267" FT misc_feature 262925..263440 FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81, score 4.1e-14" FT CDS complement(263568..264179) FT /transl_table=11 FT /locus_tag="BPP2505" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2891" FT /db_xref="HSSP:1E6B" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q7W7L0" FT /protein_id="CAE37800.1" FT /translation="MKLIGSLTSPYVRKVRVVMAEKKLDYQLELENVWSPDSQVQKYNP FT LGKVPCLVMEDGGALFDSRVIVEYLDTLSPVARLIPQPGRERAAVKCWEAIADGLLDAC FT VTVVRERLRPAAQQSPEWIERQYGKVRASLDAMDHSLGENAHCMGVNYSLADIAVGCAL FT GYLDLRFADLDWRADHANLARLYEKLSARPSFVDSMPPTA" FT misc_feature complement(263601..263939) FT /note="HMMPfam hit to PF00043, Glutathione S-transferase, FT C-terminal domain, score 3.8e-07" FT misc_feature complement(263964..264179) FT /note="HMMPfam hit to PF02798, Glutathione S-transferase, FT N-terminal domain, score 6.2e-10" FT CDS 264267..265715 FT /transl_table=11 FT /gene="purB" FT /locus_tag="BPP2506" FT /product="adenylosuccinate lyase" FT /EC_number="4.3.2.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP2890" FT /db_xref="GOA:Q7W7K9" FT /db_xref="HSSP:1DOF" FT /db_xref="InterPro:IPR004769" FT /db_xref="UniProtKB/TrEMBL:Q7W7K9" FT /protein_id="CAE37801.1" FT /translation="MPHMLQRGRMVKSPGLQPLPSYTDMQIADQLTQLNALSPLDGRYA FT SRAGALRGLLSEAGFMAHRVEVEVAWLVALSDAGLPELPAFPAAARERLAALVRNFSEA FT DAARIKDIERVTNHDVKAVEYWLKEQVADDAELARAAEFIHFACTSEDINNTSHALMLT FT RARAEVVVPQLNQVLAKLNELARTHADQPMLSRTHGQPASPTTLGKEFANVAARLQRAV FT AAIEAVEPLAKLNGATGNYNAHLSAYPEIDWPAFSRNVLAGLGLTQNRHTIQIEPHDWM FT AALSDAVARANVIVLDLDRDIWGYVALGYFKQRLKEGEVGSSTMPHKVNPIDFENSEGN FT LGLANAVLRHLSEKLPVSRWQRDLTDSTVLRNLGVGLGYALVAWDACLRGLNKLEVNAA FT AIDADIDACWEVLAEPVQTVMRRYGLPQPYEQLKALTRGKGITEEALREFIGGLALPDE FT PKARLLAMTPRSYIGLAAQLARAV" FT misc_feature 264390..265637 FT /note="HMMPfam hit to PF00206, Lyase, score 1.5e-78" FT misc_feature 265227..265256 FT /note="PS00163 Fumarate lyases signature." FT CDS 265778..266236 FT /transl_table=11 FT /locus_tag="BPP2507" FT /product="putative c'cytochrome" FT /note="ortholog of Bordetella pertussis (BX470248) BP2889" FT /db_xref="GOA:Q7W7K8" FT /db_xref="HSSP:1E86" FT /db_xref="InterPro:IPR001760" FT /db_xref="UniProtKB/TrEMBL:Q7W7K8" FT /protein_id="CAE37802.1" FT /translation="MKKLSIVAAVVCTMLAPLWSSPAAAQFAKPQDAIKYRQSALTLMA FT SHFGRMQPVMRGQAPYDAAQIKANVDIFKTLSTLPWAAFGPGTEGGDALPAVWSDAEDF FT KQKQQRLADNVAKLSAAADAGDYDKVRAAFGDVGASCKACHDSFRKKK" FT misc_feature 265778..265852 FT /note="Signal peptide predicted for BPP2507 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.905 between residues 25 and 26" FT misc_feature 265868..266230 FT /note="HMMPfam hit to PF01322, Cytochrome C', score FT 2.9e-56" FT misc_feature 266198..266215 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature complement(266265..266271) FT /note="Duplication due to IS1001 insertion" FT repeat_region 266272..266284 FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT repeat_region complement(266272..267578) FT CDS complement(266275..267495) FT /transl_table=11 FT /locus_tag="BPP2508" FT /product="transposase" FT /note="transposase for IS1001 element" FT /db_xref="GOA:Q7TTN6" FT /db_xref="InterPro:IPR002560" FT /db_xref="UniProtKB/TrEMBL:Q7TTN6" FT /protein_id="CAE37803.1" FT /translation="MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCE FT QCGARCRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRYQRVT FT DRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPDWSKIEYLAMDEFA FT LHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQLPPGAAQRIKAVAIDMTTAYEL FT EIQAHSPQAEIVYDLFHVVAKYGREVIDRVRVDQANQLRQDRPARRIIKSSRWLLLRNR FT DNLDRQQAVRLDELLQANQPLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGI FT AALNTFAQRLKGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRA FT AFPGNAR" FT misc_feature complement(266416..267405) FT /note="HMMPfam hit to PF01610, Transposase, score 7.9e-128" FT repeat_region complement(267566..267578) FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT misc_feature complement(267579..267585) FT /note="Duplication due to IS1001 insertion" FT CDS complement(267636..268331) FT /transl_table=11 FT /locus_tag="BPP2509" FT /product="putative integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2888" FT /db_xref="GOA:Q7W7K7" FT /db_xref="InterPro:IPR011577" FT /db_xref="UniProtKB/TrEMBL:Q7W7K7" FT /protein_id="CAE37804.1" FT /translation="MQPTATSVRIWDLPTRLFHWAFAAAVIGALVTVKLGGLYMDWHVR FT FGLTALGLVLFRLIWGFVGPRHARFATFVRGPGAMLAYLRGRAADHAGHNPLGALSVLA FT MLAVIGVQAATGLFASDDIMIQGPLYGHVSEATANTLTGLHQANEWIIFGLLGAHLLAI FT AWYSAVRRRALVRAMITGNAPAAQLPPATPASQDGPAIWLRAAVVGACCAALVLWIQAQ FT AVAVDMSFS" FT misc_feature complement(join(267666..267731,267825..267881, FT 267975..268040,268137..268202,268215..268280)) FT /note="5 probable transmembrane helices predicted for FT BPP2509 by TMHMM2.0 at aa 17-39, 43-65, 97-119, 150-169 and FT 200-222" FT CDS complement(268393..268674) FT /transl_table=11 FT /locus_tag="BPP2510" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2887" FT /db_xref="UniProtKB/TrEMBL:Q7W7K6" FT /protein_id="CAE37805.1" FT /translation="MNQLFDTNHLIRRPTQTKLDDTPIHVGDVVHLQLADGPVIRARVI FT YNAPINGTTTYTTELIRCAGDDKASHGQRIRFRHEHVHRIESVRGLTH" FT CDS 269244..269996 FT /transl_table=11 FT /locus_tag="BPP2511" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2886" FT /db_xref="UniProtKB/TrEMBL:Q7W7K5" FT /protein_id="CAE37806.1" FT /translation="MPAMRSGAAWVLEGRFMRFGWGLPALAVVLALAGCVNREPEERAA FT FIAYLEQVAAPQAGVVAAPPDPPTRKALGDYEAQYEPMEAAHAAVREALAAQQAALQAL FT RLHSVDEIVARQDGWDRLAERLAAARTGLEQARAAADAARAGMEQPPDLRNAYARAYEH FT SVTAPAQALARISGLLEPAVEDARRVAGFVARHRDQVDTDGPLTQVRDPSVRSELNVLL FT QALDGRSDQVSQAQALLNGLAGPARQAP" FT misc_feature 269316..269348 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 270041..271117 FT /transl_table=11 FT /locus_tag="BPP2512" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2885" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:Q7W7K4" FT /protein_id="CAE37807.1" FT /translation="MSQSSLFNSRAFVGLLIVVTIAFAWLLWPFYGAVFWGAILAIIFA FT PVHRRIAVRLAPRRNLAALLTLLMVLLVVIIPLIFITGSLVQEGANLYQRLKSGNLNFG FT AYLQQAIDALPPTVHDVLARFDLADLGSIQEKLTAGMMQASQFIATQAFNIGQDTFQFL FT IGFGVMLYLLFFLLRDGSQLSRRLRRAVPLDEHHKQHLFRKFTTVIRATVKGNIVVAAA FT QGALGGVMFSVLGIQGALLWGVIMAFLSLLPAIGAGLIWAPVAVYFLLTGAIWQGVVLI FT LFGVLVIGMVDNVLRPLLVGKDTKLPDYVVLISTLGGMALFGLNGFVIGPLIAALFVAC FT WDLFSPPDDTAGDGAARP" FT misc_feature 270041..270112 FT /note="Signal peptide predicted for BPP2512 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.938) with cleavage site FT probability 0.633 between residues 24 and 25" FT misc_feature join(270059..270118,270128..270184,270221..270289, FT 270518..270571,270677..270745,270755..270823, FT 270842..270910,270968..271036) FT /note="8 probable transmembrane helices predicted for FT BPP2512 by TMHMM2.0 at aa 7-26, 30-48, 61-83, 160-177, FT 213-235, 239-261, 268-290 and 310-332" FT misc_feature 270080..271075 FT /note="HMMPfam hit to PF01594, Domain of unknown function FT DUF20, score 1.1e-48" FT CDS 271199..271846 FT /transl_table=11 FT /locus_tag="BPP2513" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3506" FT /db_xref="GOA:Q7W7K3" FT /db_xref="HSSP:1IM5" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:Q7W7K3" FT /protein_id="CAE37808.1" FT /translation="MKLPVDGLIASFDVDAQKSFTPLCPDELPVPDGHAIVPELNAQAA FT HADLRLGSKDAHSPHAIWRATADQPMFSPVAGANVDVRWNMHCVPGTRGFELLDGLPAP FT AAYDFFVWKGVEPDMHPYGSCYHDLAERQPTGVIEFLRARDVRCVLVGGLALDYCVKVT FT ALQLRRAGLEVVVNLAACRGIAAATCEQARRELSQAGVRTVPHAGVLVRAGR" FT CDS complement(271861..273288) FT /transl_table=11 FT /locus_tag="BPP2514" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3507" FT /db_xref="GOA:Q7W7K2" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q7W7K2" FT /protein_id="CAE37809.1" FT /translation="MKPSPEILALRWKDTCAHYSPHEWVAARNVVTANKAALADYFYEC FT MLADPNAAFFLSDQLVKTKLHASMQDWLESVYAAAPTEEYERTVAFQRKVGEVHARIDI FT PVHLVMRGACALIRRICELLDRDASLSAAQAAATCRYVADVTMTAVEMMCHAYSVSHDR FT NARAEEGYRLLALSQNVGAERERQRAALLDWENQLMFGLSVGKPWDELPPIRKSEFGLW FT FIHKAAHAFEGAAESRSVSSQLQHIDQLLADAQQTQPPPDQRLAILHSVRDATKAIGFL FT IDGLFEQAGNLESGRDTLTRLLNRKYLHVVLSKEVAYARKTGVPLSVLVADIDYFKSIN FT DAHGHDAGDFVLQQVASLIASYSRGGDYTFRLGGEEFLVVLVDADGTQALNVAEALRRR FT IQEKATVLPDGGEVRLTLSIGVAAHDRHPDYQRLLKRADQALYAAKPGGRNRCVLANAG FT PAEPSQRPDAVSQSGQH" FT misc_feature complement(271936..272415) FT /note="HMMPfam hit to PF00990, GGDEF domain, score 3.6e-54" FT CDS complement(273455..274060) FT /transl_table=11 FT /locus_tag="BPP2515" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3508" FT /db_xref="GOA:Q7W7K1" FT /db_xref="InterPro:IPR006674" FT /db_xref="UniProtKB/TrEMBL:Q7W7K1" FT /protein_id="CAE37810.1" FT /translation="MQTESLPRSEADTRACRALAAALRARDPSTAIHSGRVAALAGELG FT RAYGLDGMAIRRLELGASLHDIGKLGVADRVLHHPGRLLGEDWTHMQEHSVLGERIIAA FT TGLDDGAAIGRIVRHHHEHYDGSGYPDGLAGEAIPLEARLIALVDAYDAITAHRPYRSP FT VPHDRTMAMLEAEQGARTDPQAFTIFARMIERSQWRAG" FT misc_feature complement(273599..273973) FT /note="HMMPfam hit to PF01966, HD domain, score 4.5e-20" FT CDS 274096..274419 FT /transl_table=11 FT /locus_tag="BPP2516" FT /product="Hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3509" FT /db_xref="UniProtKB/TrEMBL:Q7W7K0" FT /protein_id="CAE37811.1" FT /translation="MAKLTAKAASVPTNGAPAAAVDWRSLLEFHSWRCPGRAVLNMQTD FT VNINSLAALGLMEEIFANYHAYRVAKQAGDTGEMALRRAKIETLAAEQRRVIAAVCRDT FT GAQ" FT CDS complement(274441..274707) FT /transl_table=11 FT /locus_tag="BPP2517" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3511" FT /db_xref="UniProtKB/TrEMBL:Q7W7J9" FT /protein_id="CAE37812.1" FT /translation="MENQEIMVAFAQAIQQVTAKVSALETTVQCLIAAQPAEQREQFGA FT ALRQAASGLLAESDQRPLTGSALSHLKLAIDAYLEAAGQQPLQ" FT CDS 275037..275273 FT /transl_table=11 FT /locus_tag="BPP2518" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3512" FT /db_xref="UniProtKB/TrEMBL:Q7W7J8" FT /protein_id="CAE37813.1" FT /translation="MASESRGREAETMSEPAIAWRRVDDYCWVGPPGWTICRVWLDGSY FT QYELWFSRGDAGTIYGMRASLEGAQHLYMQKLG" FT CDS 275290..275547 FT /transl_table=11 FT /locus_tag="BPP2519" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3513" FT /db_xref="UniProtKB/TrEMBL:Q7W7J7" FT /protein_id="CAE37814.1" FT /translation="MPGRGKIDAERRCGLMKTEQKRGFLDRFFPAGIRPACPKCGHQGF FT IVLHDDAVVNADKPIAIVACASEDCHAALGVLPASAVWDE" FT tRNA complement(275652..275728) FT /note="tRNA Met anticodon CAT, Cove score 74.05" FT CDS complement(join(275819..276295,276299..276877, FT 276881..277144)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2520" FT /product="conserved hypothetical protein (Pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP3514" FT /db_xref="PSEUDO:CAE37815.1" FT CDS complement(277166..278140) FT /transl_table=11 FT /locus_tag="BPP2522" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3515" FT /db_xref="InterPro:IPR019257" FT /db_xref="UniProtKB/TrEMBL:Q7W7J6" FT /protein_id="CAE37816.1" FT /translation="MAHTPTMLAAAAPFMPEATGVDPALDALLAGLQAHPARIDPKYLY FT DALGSSLFAAITQLPEYYPTRCEAEIFATHLEAIARHTGPVRTLIDLGAGDCAKAERLL FT PCLRPQRYVPIDISTDFLGQAVARVRRAHPWLDVLPLGRDLNAGLDLPEAIDAQGRLFF FT YPGSSIGNLDPDAALALLASLRAQAGVSGGLLIGVDRVKARAIVEPAYDDALHLTGAFN FT LNLLRHVNSVLGSDFDVRDWTHVALYNEPRSRMEMHLQARSDIRVRWPGGQRRFQADER FT IHTENSYKYTIERFVDLLRRAGYGDIRHWSDARDWFSVFSARA" FT misc_feature complement(278081..278140) FT /note="Signal peptide predicted for BPP2522 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.826) with cleavage site FT probability 0.787 between residues 20 and 21" FT CDS 278472..279071 FT /transl_table=11 FT /locus_tag="BPP2523" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3517" FT /db_xref="UniProtKB/TrEMBL:Q7W7J5" FT /protein_id="CAE37817.1" FT /translation="MSSIVVARFDSVPSARSAAHALVGDGFREEAISILYGDPDRTGRR FT MGRPAWRFGPDLRTRAARWRAIVSAAALATIGTLGGVIVPVLTGYGRVGMVVGAALGAY FT AGALAGACWMASGLRRARAEAAYAGQLARDRVVLLAVQVHPDDEEAAAALLRDAGGLQV FT EKARSRWWPGARGQSTPTGWRTRAPRPPAQRTQWQP" FT misc_feature join(278667..278735,278748..278816) FT /note="2 probable transmembrane helices predicted for FT BPP2523 by TMHMM2.0 at aa 66-88 and 93-115" FT CDS 279059..280489 FT /transl_table=11 FT /locus_tag="BPP2524" FT /product="putative phospholipase D family protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3518" FT /db_xref="GOA:Q7W7J4" FT /db_xref="InterPro:IPR001736" FT /db_xref="UniProtKB/TrEMBL:Q7W7J4" FT /protein_id="CAE37818.1" FT /translation="MATLRRGFACRLARQVAVMFMLAALGACATVPGMQGLRERRAQAG FT LSTDYGWQSLQRSHTIVTDATGGDGDDAMARHLAVEAAISGAPLVAGNQVRLLADGPAT FT YRSMLDAIAQARRYIHMETYIFEDDEAGQRFADALMAARQRGVEVAVMVDAVGTLNTPR FT QWFERLKQGGIKVAVFNPVNPARAGLGWAPNQRNHRKLLVVDGQVGFLGGLNISSVYSS FT GSRSGSGSGRAAQAPGPAASRADTAPWRDTHIAVRGPAVAEIERVIQDGWLRQTGAPLG FT GGAVRLSVPAPGDLHVRILANEPNERDGYTVYLTLMSAFESARQSIHITMAYFVPDPAF FT VRVLADAARRGVDVALVLPGFSDSSLVWYAGRSHYQALLDAGVKLYERRDALLHAKTAV FT VDGVWSTVGSSNMDWRSFALNYELNAVIVGARFGAEMEALFERDRAAAVPIDPRNWADR FT GADDRFMEAFSRLFERWL" FT misc_feature 279059..279145 FT /note="Signal peptide predicted for BPP2524 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.774) with cleavage site FT probability 0.507 between residues 29 and 30" FT misc_feature 279092..279160 FT /note="1 probable transmembrane helix predicted for BPP2524 FT by TMHMM2.0 at aa 12-34" FT misc_feature 279110..279142 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 279635..279718 FT /note="HMMPfam hit to PF00614, Phospholipase D. Active site FT motif, score 0.00039" FT misc_feature 280223..280306 FT /note="HMMPfam hit to PF00614, Phospholipase D. Active site FT motif, score 0.001" FT CDS complement(280499..282160) FT /transl_table=11 FT /locus_tag="BPP2525" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3521" FT /db_xref="GOA:Q7W7J3" FT /db_xref="InterPro:IPR002932" FT /db_xref="UniProtKB/TrEMBL:Q7W7J3" FT /protein_id="CAE37819.1" FT /translation="MNWIAGRYTTFALMLIGAALTSALAVHSSRAWLWAAVPFVLLSLL FT GVYDLLQTRHAIRRNYPVLGNLRFLFEFIRPEIRQYFLEDDTHASPFSRAQRSIVYQRA FT KQDIDKRPFGTQEDVYGDRYEWINHSMTPAHVADADFRVTVGGPECRQPYSMSAFNISA FT MSFGALSANAVLALNEGARIGDFAHDTGEGGISRYHRERGGSLVWNIGSGYFGCRDAHG FT AFSEEAFVKNACTPQVKMIEIKLSQGAKPGHGGILPAGKVTPEIAEARGVPAWQDCNSP FT SSHSAFDSPVGLLHFVARLRELSGGKPVSFKFCVGHPWEWFAIVKAMLQTNITPDFIVV FT DGAEGGTGAAPVEFVDHVGTPLREALRLVHNTLIGVNLRDRIKLGASGKIITAFDMARA FT MAMGADWCNAARGFMFAIGCIQAQACHTGKCPTGVTTQDPLRQRALVVPDKAQRVANFH FT GNTLHALAELLGAAGLTHPGQLRPHHIARRISSSEVRLLSALFPELAPGELLRGEFRHH FT VFQVGWGMAQADSFQPAMDISAALAALRPAGAPAHA" FT misc_feature complement(280736..281857) FT /note="HMMPfam hit to PF01645, Conserved region in FT glutamate synthase, score 2.9e-78" FT misc_feature complement(join(282002..282067,282083..282148)) FT /note="2 probable transmembrane helices predicted for FT BPP2525 by TMHMM2.0 at aa 4-26 and 31-53" FT misc_feature complement(282077..282160) FT /note="Signal peptide predicted for BPP2525 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.996) with cleavage site FT probability 0.696 between residues 28 and 29" FT CDS complement(282235..283542) FT /transl_table=11 FT /locus_tag="BPP2526" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3522" FT /db_xref="InterPro:IPR007272" FT /db_xref="UniProtKB/TrEMBL:Q7W7J2" FT /protein_id="CAE37820.1" FT /translation="MPPVLYCNDPGRASALSLFLHPLRDVIMSINTSTLDLPSALPPIR FT INHKPLWAALLLVLAGAAYLLQSVGWRQSALWVVGALLGVTLYHASFGFTQAWRVFVSD FT RRGAGLRAQMVMLAVGVLLFFPFLAQGTLWGQPVSGFVSPPGVSVVLGAFLFGIGMQLG FT GGCASGTLFAVGGGNTRMLVTLLFFIVGSVIATANFGWWSALPALPPTSLIKSWGLPGA FT LLANLAVFALIAWTTTVLEKRRHGQLISHAARTSRTPSLLQGPWPMVWGGIALVVLNFA FT TLALAGRPWGITSAFALWGAKALDALGGDVASGAYWSRQQAALAAPVRQDITSVMDIGL FT MLGALAAASAAGKFAPVWKVPARSLLAAVVGGLLLGYGARLAFGCNIGAYFSGILSGSL FT HAWLWLPAAFLGSALGVRLRPWFGLAVEKTPAASSC" FT misc_feature complement(join(282295..282360,282391..282447, FT 282469..282534,282694..282759,282823..282888, FT 282934..282999,283021..283086,283132..283197, FT 283261..283317,283333..283389)) FT /note="10 probable transmembrane helices predicted for FT BPP2526 by TMHMM2.0 at aa 51-70, 75-94, 115-137, 152-174, FT 181-203, 218-240, 261-283, 336-358, 365-384 and 394-416" FT CDS complement(283603..284550) FT /transl_table=11 FT /locus_tag="BPP2527" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3523" FT /db_xref="GOA:Q7W7J1" FT /db_xref="InterPro:IPR004776" FT /db_xref="UniProtKB/TrEMBL:Q7W7J1" FT /protein_id="CAE37821.1" FT /translation="MQAVLTAALPVFALILTGWLAARWRVLGPSATDALNRYVVYLSLP FT ALLFRAMAQADLRQLADYWGFTAAVAGGIALTFGAAILACRRDGARLTDLSLEGLATSY FT GNAGYMGIPLCLALLGPASLAPAIITTLLTACVLFGVAIALIEFDQHRDRHWSATLLKV FT ARALLRNPLLAAPLLGLACAAAGITLPAGLDNYAALLGASASPCALVTIGLFLAQSQPG FT GDRGTVGLMVDGKLLLHPAVTAVLAFAVFDMPPLWAWCAVLMAALPIGTGPFMLAQLYG FT RDARPSSRAILLSTVLSVPTITALVAWIGRQPLG" FT misc_feature complement(join(283624..283680,283720..283785, FT 283798..283863,283900..283956,283987..284052, FT 284113..284178,284194..284259,284296..284361, FT 284392..284448,284470..284535)) FT /note="10 probable transmembrane helices predicted for FT BPP2527 by TMHMM2.0 at aa 5-27, 34-53, 63-85, 97-119, FT 124-146, 166-188, 198-217, 229-251, 255-277 and 290-309" FT misc_feature complement(284113..284508) FT /note="HMMPfam hit to PF03547, Auxin Efflux Carrier, score FT 3.4e-12" FT CDS 284675..285118 FT /transl_table=11 FT /locus_tag="BPP2528" FT /product="putative acetyltransferase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3524" FT /db_xref="GOA:Q7W7J0" FT /db_xref="HSSP:1Q2Y" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q7W7J0" FT /protein_id="CAE37822.1" FT /translation="MPQTAAPLRIVLGTWDRLREDATTVRFEVFVAEQRVPEDIELDDF FT DPLSVHAVAYGADGAPLGTGRLLPDGHIGRMAVRKRARGLGVGGRILDALIEQGHGDGH FT RMLVLHAQSHARGFYEAHGFQAEGDEFVEAGIAHVAMTRELAR" FT misc_feature 284831..285049 FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 1.7e-12" FT tRNA complement(285212..285296) FT /note="tRNA Leu anticodon CAG, Cove score 75.85" FT CDS 285458..286069 FT /transl_table=11 FT /locus_tag="BPP2529" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3525" FT /db_xref="InterPro:IPR005636" FT /db_xref="UniProtKB/TrEMBL:Q7W7I9" FT /protein_id="CAE37823.1" FT /translation="MSRPVCARCARPRSHCLCALIPALSCRTRELFLQHPAEARHALNT FT ARLAALGLRQAELHVGERFDPALWRRPGMRSWLLFPGEAAREPGPVGEGGPLLLVVPDG FT SWRQARGLVAGNPDLASLPRLALPADGVSAYRVRHADLPGALSTIEAVVQVLNALEAPA FT RFDALLAPFHALVQGQVRAMGDEVYQRHHVRRAGRRGKSG" FT tRNA complement(286157..286241) FT /note="tRNA Leu anticodon CAG, Cove score 75.85" FT CDS 286571..289051 FT /transl_table=11 FT /gene="rnr" FT /gene_synonym="vacB" FT /locus_tag="BPP2530" FT /product="putative ribonuclease R" FT /EC_number="3.1.-.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3526" FT /db_xref="GOA:Q7W7I8" FT /db_xref="InterPro:IPR003029" FT /db_xref="UniProtKB/TrEMBL:Q7W7I8" FT /protein_id="CAE37824.1" FT /translation="MAKRSKNESNNNRSTPVLPDVPADFDPDVPSREAILTALRSAGAP FT LSPAELAERMGVERPATLVGFERRLGAMERDGQLLPNRKGVLLLATKLDFVAGRVQGHR FT DGFGFLVRDDGGPDIFLSPREMLKVLHGDRVLVKPSGEYRGKPEGAIVEVIERRTNKLV FT GRFLHEHRLSIVVPEDQRIKHDILIPPSDTNGAQHGQVVSVQIMEQPTRHTQPLGRVYE FT VLGEIDDPGMEIEIAVRKFDVPVDFSEPANKQAARLPDSVRKTDLKQRVDLRDVPLITI FT DGEDARDFDDAVYCEPVELGTGQRKRPAWRLLVAIADVSNYVRPNDALDDDAYERGTSV FT YFPRRVIPMLPEVLSNGLCSLNPNVDRLVLVCDMVIPATGAKAGTVTAYQFYNAVMHSH FT ARTTYTSIWEALQQPGGPAAAALGAIMPHVRHLHELYQLLSQQRRKRGAIDFDTVETRI FT VCNELGRIEQIVPMVRNDAHKLIEECMLAANTCAADFMSRSKHPGLYRIHEGPTPERLQ FT SLRDFLRTMGLSLGGGDEPTAKDYGEFLDSVRGRPDYPLLQTMCLRSMQQAIYSPDNLG FT HFGLAYPAYTHFTSPIRRYPDLLTHRVIKALLEGQRYMPELEDQPIVIGRSQREHEHAV FT WEKLGLILSGSERRADEASRDVEAWLKCWFVKERVGEDFSGTVTGVASFGIFVTLDTLH FT VEGLVHVSELGGEYFQFNDALHELRGERTGMRYRLTDKVQVQVSRVDLEVRRIEFRLVK FT GTSFDALRKAAARGPDEGRRVKKAAAPKPAALKGQTAKQRRAEAKQASKPANTPKAAKS FT AGASAQKKPARARH" FT misc_feature 287144..288286 FT /note="HMMPfam hit to PF00773, RNB-like protein, score FT 1.2e-118" FT misc_feature 288299..288373 FT /note="PS01175 Ribonuclease II family signature." FT misc_feature 288569..288826 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain, score FT 3e-09" FT CDS 289162..289899 FT /transl_table=11 FT /locus_tag="BPP2531" FT /product="putative tRNA/rRNA methyltransferase" FT /EC_number="2.1.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP3527" FT /db_xref="GOA:Q7W7I7" FT /db_xref="InterPro:IPR013123" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7I7" FT /protein_id="CAE37825.1" FT /translation="MASTQVLAGFHAVVARLRHAPESIKEIYVEASRRDKRMQTFLEQA FT ERAGRRVHPVAAERLDGLARGTRHQGVVAVAEERSLAVGIDEVLDVIEGPALLLILDGV FT TDPHNLGACLRTADAAGVHAVIAPRDRAVGLNATVQRVACGAADTVPYLTVTNLARTMR FT ELKERDVWLVGTDDQAGESMHQVDARRSMAWVMGAEGEGMRRLTRETCDQLVRIPMLGS FT VESLNVSVASAVCLYESVRQRQG" FT misc_feature 289447..289872 FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase family, FT score 7.7e-55" FT CDS 289953..291197 FT /transl_table=11 FT /locus_tag="BPP2532" FT /product="Cys/Met metabolism PLP-dependent enzyme" FT /note="ortholog of Bordetella pertussis (BX470248) BP3528" FT /db_xref="GOA:Q7W7I6" FT /db_xref="HSSP:1GC0" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/TrEMBL:Q7W7I6" FT /protein_id="CAE37826.1" FT /translation="MHQNGFTTTIVHSDRDQSAEHGAVHKPMHPSSEYVYEDARELAAV FT FQGKAGFTYARQGTPTTTALEARITRMEAGKSTVSFATGMAALAAIFTTLLRRGDHLVS FT SQYVFGNTNSLLNTLMELGVEVTMVDATDVRQVRDALRPNTRMVFTETIANPGTQIADL FT AGMGALCRERGLVYVVDNTLTSPWMFRPVEVGASLVMNSLSKYIAGHGHALGGAVTDTG FT LYDWSGYANIYESYRKGAPTGWGLTQIKKKGLRDMGGTLAAEPAHRIAIGTETLALRMA FT RHCSNALALATFLQGHPGVARVHYPGLSSHAQHQRASELFDGRYGGLLGVELAEGIDCF FT DFLNRLRIVLMATHLGDTRSLALPAAHTIYYEMGAEKRAQMGIADSLIRVSVGIEDEAD FT LLFDFDQALRGCLQS" FT misc_feature 289971..291179 FT /note="HMMPfam hit to PF01053, Cys/Met metabolism FT PLP-dependent enzyme, score 4.5e-105" FT CDS 291238..291918 FT /transl_table=11 FT /locus_tag="BPP2533" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3529" FT /db_xref="GOA:P0A3X4" FT /db_xref="InterPro:IPR006620" FT /db_xref="UniProtKB/Swiss-Prot:P0A3X4" FT /protein_id="CAE37827.1" FT /translation="MLIQIADLFTPAEAAQIRARLEAADWVDGKVTAGYQSAQVKHNRQ FT LSEQHPLAQELGGLILQRLAANNLFMSAALPRKIFPPLFNRYEGGEAFGYHVDNALRPV FT PGTAERVRTDLSATLFFSEPDSYDGGELVVDDTYGPRTVKLPAGHMVLYPGTSLHKVTP FT VTRGARISAFFWLQSLVREDSQRSLLLEMDVAIQRLNQDTPGHASIVQLTGVYHNLLRR FT WTDV" FT misc_feature 291469..291771 FT /note="HMMPfam hit to PF03171, 2OG-Fe(II) oxygenase FT superfamily, score 2.3e-11" FT misc_feature 291667..291801 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT CDS 292239..292511 FT /transl_table=11 FT /gene="hupB" FT /gene_synonym="hopd" FT /locus_tag="BPP2534" FT /product="DNA-binding protein Hu-beta" FT /note="ortholog of Bordetella pertussis (BX470248) BP3530" FT /db_xref="GOA:Q7W7I5" FT /db_xref="HSSP:1B8Z" FT /db_xref="InterPro:IPR000119" FT /db_xref="UniProtKB/TrEMBL:Q7W7I5" FT /protein_id="CAE37828.1" FT /translation="MNKTELIDHIASKADISKAAAGRSLDALIGAVKTTLKKGGTVTLV FT GFGTFAVSARAARTGRNPRTGETIKIKKAKVPKFRPGKALKDAVN" FT misc_feature 292239..292505 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00216, Bacterial DNA-binding FT protein, score 4.1e-47" FT misc_feature 292374..292433 FT /note="PS00045 Bacterial histone-like DNA-binding proteins FT signature." FT tRNA 292620..292695 FT /note="tRNA Val anticodon TAC, Cove score 92.08" FT CDS 292995..293831 FT /transl_table=11 FT /gene="tonB" FT /locus_tag="BPP2535" FT /product="siderophore-mediated iron transport protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3531" FT /db_xref="GOA:Q7W7I4" FT /db_xref="InterPro:IPR006260" FT /db_xref="UniProtKB/TrEMBL:Q7W7I4" FT /protein_id="CAE37829.1" FT /translation="MPSPQSGRSFSSHTSLALRAGAGFTVLALHAAVIGAVFLSKTERP FT ELLEPEAVMVSIIEAPLPQLAQAEPTPEPPTPVEETPPEPEPEPVIEPEPEPEPEPVVE FT PEPEPEPVVEPEPEPEPVVEKPPEPAPKPKPKPKPKPKPKPQPKPEVPPEPKKIETPPA FT GAPQGAQQVTQAPRQAPPPDEPIMVSSVEYQGARPMPVYPMASKRLREEGRVVVLVEIS FT TQGLVDRASIDTSSGFSRLDESALAAARKARFKPLTRNGVAYPAKAKLPFDFVMRN" FT misc_feature 292995..293087 FT /note="Signal peptide predicted for BPP2535 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.918) with cleavage site FT probability 0.882 between residues 31 and 32" FT misc_feature 293037..293105 FT /note="1 probable transmembrane helix predicted for BPP2535 FT by TMHMM2.0 at aa 15-37" FT misc_feature 293589..293693 FT /note="HMMPfam hit to PF03544, Gram-negative bacterial tonB FT protein, score 1.7e-11" FT CDS 293833..294810 FT /transl_table=11 FT /gene="exbB" FT /locus_tag="BPP2536" FT /product="MotA/TolQ/ExbB proton channel family protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3532" FT /db_xref="GOA:Q7W7I3" FT /db_xref="InterPro:IPR002898" FT /db_xref="UniProtKB/TrEMBL:Q7W7I3" FT /protein_id="CAE37830.1" FT /translation="MSNAINTATLVAQAATPSAAATPDAPAAAPLAQQAGEAAGAAAQT FT GAEALNQAAQAGTEAVNQAAQALSAAAPAVPPAPLATPDMGFLHFVAQSDFVGKTLFII FT LIVMSLVTWYLIVVKAVGNMGMRKRAAHFLNKFWNASSLEQVENEIVTHGARDPFSHLA FT SHAMHAQQHHAKFGATKLEESGSNGEFVSRTMRKVIDEETAKLENGLTVLASVGSTAPF FT VGLFGTVWGVYHALVGIGLSDGVTINRIAGPVGEALIMTGLGLAVAIPAVLAYNAFVRN FT NRVFLSRLDAFAHDLFAFLTTGQQVAVSDGKVRALRRQHGRGSE" FT misc_feature 293833..293892 FT /note="Signal peptide predicted for BPP2536 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.995) with cleavage site FT probability 0.691 between residues 20 and 21" FT misc_feature join(294118..294186,294490..294558,294601..294669) FT /note="3 probable transmembrane helices predicted for FT BPP2536 by TMHMM2.0 at aa 96-118, 220-242 and 257-279" FT misc_feature 294298..294714 FT /note="HMMPfam hit to PF01618, MotA/TolQ/ExbB proton FT channel family, score 6.7e-63" FT CDS 294810..295277 FT /transl_table=11 FT /gene="exbD" FT /locus_tag="BPP2537" FT /product="biopolymer transport protein ExbD/TolR" FT /note="ortholog of Bordetella pertussis (BX470248) BP3533" FT /db_xref="GOA:Q7W7I2" FT /db_xref="InterPro:IPR003400" FT /db_xref="UniProtKB/TrEMBL:Q7W7I2" FT /protein_id="CAE37831.1" FT /translation="MAFGSFDNKGSGSHTVSEINMVPLIDVMLALLVIFIITAPLLAHS FT IRINIPQVSAEQIEEEPKTIDLAIDANGALFWDEKPVSIDDLPNRFKAIAGDKPQAEIR FT IRADQATRYETLAQVMASARRSGMTRIGFITSPAPQGAPGEAGASAAPAAP" FT misc_feature 294846..295223 FT /note="HMMPfam hit to PF02472, Biopolymer transport protein FT ExbD/TolR, score 1.2e-18" FT misc_feature 294867..294935 FT /note="1 probable transmembrane helix predicted for BPP2537 FT by TMHMM2.0 at aa 20-42" FT CDS 295360..296031 FT /transl_table=11 FT /gene="basR" FT /locus_tag="BPP2538" FT /product="response regulator protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3534" FT /db_xref="GOA:Q7W7I1" FT /db_xref="HSSP:1KRW" FT /db_xref="InterPro:IPR001867" FT /db_xref="UniProtKB/TrEMBL:Q7W7I1" FT /protein_id="CAE37832.1" FT /translation="MRVLVIEDDTTLGHALQEFLADQGYAVDWLTEGDKVLGALAGQPY FT DLLLLDLNLPGMSGLDVLRQLRQDGNQVPVLILTARDGLDDRVAGLDAGADDYVTKPFD FT LPELAARVRALGRRRSGQAQPQIEVGPLVFDTVGREVRANGTRLALSVRELSVLEMLMA FT RSGRVVTKRQIVNSLSAWDADFSENAVEVYVYRLRKRLEGSGASIQTVRGFGYMLDVEA FT A" FT misc_feature 295360..295719 FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 1.1e-40" FT misc_feature 295795..296004 FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal, score 4.5e-17" FT CDS 296090..297208 FT /transl_table=11 FT /locus_tag="BPP2539" FT /product="sensor kinase protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3535" FT /db_xref="GOA:Q7W7I0" FT /db_xref="HSSP:1BXD" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q7W7I0" FT /protein_id="CAE37833.1" FT /translation="MNFLPPTPPPPDPVGWKLPRGSLARHLVLRLMPPLLLLVLLDLAA FT TWVITHKIDMSIWMLEDFFWLMVVGQIVLIALFTGVIIRGVRSGLRSVNHLAEEIRQRS FT IDDMQPMEVAGLPAEIAPLVTHINDLLGRLDASLAAQRRFIGHAAHQLRTPLSGLRLES FT ELMLARPLPEDVRMRAERIKAVSDRMIRLGQQLLVMARADPDARPQDRFIRLDLCEWVR FT ASGAEWIPRVRAAQAEIDLVAPEQPVWIDGDPLLLDEMLGNLIDNALRYGKPRGRICLT FT IDVNPPALIIEDDGPGISPQERDSVFEAFYRAPDAKAGGSGLGLAIVREIAHAHGAWWK FT LSSRPEYAGTRLSVVFPGPRIGTQLTRQERAS" FT misc_feature join(296168..296236,296279..296347) FT /note="2 probable transmembrane helices predicted for FT BPP2539 by TMHMM2.0 at aa 27-49 and 64-86" FT misc_feature 296291..296497 FT /note="HMMPfam hit to PF00672, HAMP domain, score 0.0011" FT misc_feature 296507..296704 FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 1.6e-11" FT misc_feature 296843..297166 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90-like ATPase, score 1.6e-27" FT CDS 297205..299115 FT /transl_table=11 FT /gene="kup" FT /gene_synonym="trkD" FT /locus_tag="BPP2540" FT /product="putative potassium uptake protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3536" FT /db_xref="GOA:Q7W7H9" FT /db_xref="InterPro:IPR003855" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7H9" FT /protein_id="CAE37834.1" FT /translation="MTHTAAGAPRDAKTAIHAPSSRMALMLGALGVVYGDIGTSPLYTL FT RACLNTIDDLQPAHVLGVLSILFWLLMIVVSLKYVTLVLRADNRGEGGTLALLELAVRG FT REGRARWLLIVLGIFGAALFYGDSMITPAISVLSALEGISIVSHTLEPWVVPVALVVLV FT ALFAIQSHGTGAVGKLFGPIMALWFATLAVLGGYQIWLTPEVLAALNPVWALRFIAEFP FT VMSFLLLGAVVLALTGAEALYADMGHFGRPAIRRAWFAMVLPALTLCYFGQGALLLRDP FT AAIRNPFFLMAPEWGLAALVGLATVATVVASQAVISGAFSVTRQAVQLGFWPRMQILHT FT SAVEKGQIYLPQVNALLLCAVLVLVLLFRNSENLAAAYGFAVTGTMLTTSVLAFAVLPR FT DSTGGKRVLWMVLLGALLVIDILLFGANIFKIHEGGWLPLLVGVVVFTLMMTWRRGRRL FT LADMQARDRQPLREFMTQLEAFPPARVQGTAIFMTMNAGNVPPALLHNLKHNKVLHDHV FT LFLSIRVADVPYVSEDERFEMHKISASSWQASINYGFKEDPDVPDALRQVAEAYPEIDL FT EPMRTSFYLSRQTVVAARRPAMARWRRALFAFMARNSTRSTRFFKIPPNRVVEMGMQVE FT L" FT misc_feature join(297265..297333,297376..297444,297538..297606, FT 297634..297702,297739..297807,297865..297933, FT 297970..298038,298246..298308,298327..298395, FT 298423..298491,298504..298560) FT /note="11 probable transmembrane helices predicted for FT BPP2540 by TMHMM2.0 at aa 21-43, 58-80, 112-134, 144-166, FT 179-201, 221-243, 256-278, 348-368, 375-397, 407-429 and FT 434-452" FT misc_feature 297280..299109 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02705, K+ potassium transporter, FT score 2e-156" FT CDS complement(299201..300538) FT /transl_table=11 FT /gene="argG" FT /locus_tag="BPP2541" FT /product="argininosuccinate synthase" FT /EC_number="6.3.4.5" FT /note="ortholog of Bordetella pertussis (BX470248) BP3537" FT /db_xref="GOA:Q7W7H8" FT /db_xref="InterPro:IPR018223" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7H8" FT /protein_id="CAE37835.1" FT /translation="MTTILPNLPTGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANL FT GQPDEPDYDEIPRRAMQYGAEAARLVDCRAQLVAEGIAALQAGAFHISTAGLTYFNTTP FT IGRAVTGTMLVAAMKEDGVNIWGDGSTFKGNDIERFYRYGLLTNPDLKIYKPWLDQTFI FT DELGGRAEMSEYMRQAGFDYKMSAEKAYSTDSNMLGATHEAKDLELLNSGIRIVQPIMG FT VAFWQDSVQIKAEEVTVRFEEGQPVALNGVEYADPVELLLEANRIGGRHGLGMSDQIEN FT RIIEAKSRGIYEAPGLALLFIAYERLVTGIHNEDTIEQYRENGRKLGRLLYQGRWFDPQ FT AIMLRETAQRWVARAITGEVTLELRRGNDYSLLNTESANLTYAPERLSMEKVENAPFTP FT ADRIGQLTMRNLDIVDTREKLFTYVKTGLLAPSAGSALPQIKDGKK" FT misc_feature complement(299282..300496) FT /note="HMMPfam hit to PF00764, Arginosuccinate synthase, FT score 4.2e-183" FT misc_feature complement(300119..300154) FT /note="PS00565 Argininosuccinate synthase signature 2." FT misc_feature complement(300464..300490) FT /note="PS00564 Argininosuccinate synthase signature 1." FT CDS complement(300689..301630) FT /transl_table=11 FT /gene="argF" FT /locus_tag="BPP2542" FT /product="ornithine carbamoyltransferase" FT /EC_number="2.1.3.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP3538" FT /db_xref="GOA:Q7W7H7" FT /db_xref="HSSP:1PVV" FT /db_xref="InterPro:IPR006131" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7H7" FT /protein_id="CAE37836.1" FT /translation="MTPPTTQNGPLRHFLQFKDFSPAEIAYVLERTRIIKDKFKRYEPH FT MPLHDRTLAMVFEKASTRTRVSFEAGMYQMGGSVINLTSNDSQLGRSEPIEDTARVISR FT MVDIVMIRTFEQTRIERFASHSRVPVINGLTNEYHPCQILADIFTYIEHRGPIAGKTVA FT WIGDANNMSYTWLQAAEMLGFTLHVSTPAGYELDPARIGAPAAGVLKQFKDPMQACQGA FT HLVTTDVWTSMGYEAENEERRAAFADWCVDAEMMAAADPQAVFMHCLPAHRGEEVTGEV FT IDGAQSVVWDEAENRLHVQKALMEFLLLGQLA" FT misc_feature complement(300707..301162) FT /note="HMMPfam hit to PF00185, Aspartate/ornithine FT carbamoyltransferase, Asp/Orn binding domain, score FT 2.6e-47" FT misc_feature complement(301169..301597) FT /note="HMMPfam hit to PF02729, Aspartate/ornithine FT carbamoyltransferase, carbamoyl-P binding domain, score FT 6.5e-73" FT misc_feature complement(301439..301462) FT /note="PS00097 Aspartate and ornithine FT carbamoyltransferases signature." FT CDS complement(301682..302992) FT /transl_table=11 FT /gene="argD" FT /locus_tag="BPP2543" FT /product="putative acetylornithine aminotransferase" FT /EC_number="2.6.1.11" FT /note="ortholog of Bordetella pertussis (BX470248) BP3539" FT /db_xref="GOA:Q7W7H6" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/Swiss-Prot:Q7W7H6" FT /protein_id="CAE37837.1" FT /translation="MIDLLARARPRAGVGPRPAFRPAHAAGARRPSGSAPFFVENPAMS FT SALANIYARLPVSFTHGRGVWLWDTGERRYLDALAGIGVSCLGHGHPGLVAAISEQAAR FT LIHTSNIYEVPQQAALARRLAELSGMSEVLFSNSGSEANEAAIKLARYYGYKQGNTHAH FT IITMDSSWHGRTLATLAATGSDKARQGFGPMPSGFIQVPYNDLPAIRAAGEAEPRVTAV FT LLEVLQGEGGIRPSDMAFLRGVRQLCTERGWLLMIDEVQSGIGRTGKWFAHQWADIRPD FT VMTLAKGLAGGVPIGAMLAAGPAAGVFAPGSHGTTFGGGPLACAAGLAVIDAIEQEGLL FT ANAHEVGAHLHAALASELAGVPGIIEVRGHGLMLGIELDRPCGILATRAMEAGLLINVT FT RERVVRLLPPLILSGEEADQIVRILVPLIKQFLAQQQ" FT misc_feature complement(301697..302857) FT /note="HMMPfam hit to PF00202, Aminotransferase class-III, FT score 4.3e-139" FT misc_feature complement(302117..302230) FT /note="PS00600 Aminotransferases class-III FT pyridoxal-phosphate attachment site." FT CDS 303073..303363 FT /transl_table=11 FT /locus_tag="BPP2544" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3540" FT /db_xref="UniProtKB/TrEMBL:Q7W7H5" FT /protein_id="CAE37838.1" FT /translation="MATRVKQFVIHGVTESGVRFRPSDWAERLAGVMAQFRPPGSAGNH FT LTYSPYVLPVVIDGVRSVVVDQRLRELEPLAYKFVVDFAHDNHLKTEEREA" FT CDS complement(303368..304276) FT /transl_table=11 FT /locus_tag="BPP2545" FT /product="LysR family regulatory protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3541" FT /db_xref="GOA:Q7W7H4" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W7H4" FT /protein_id="CAE37839.1" FT /translation="MDRFDQYRVFAQVAEMGSFIKAAHALELPRASVSAAVQQLEGQVG FT ARLLHRTTRQVRLTADGTQLLERIRPLLAEVEDIDQLFQACQRQAAGRLNIDVPSRIAR FT RLLAPALPALLRRHPRLQLALGSGDRAIDLVREGVDCAVRIGVLHSSSLVVRPLGSLAL FT INCASPAYLREHGAPGHPDELAAGHWTVGYASPQTGRALPWEYATPRGGTSLVEAASRV FT VVNNAESYIACCLAGLGLIQIPRYDVQHLLDGGQLVEVMPDQRAASMPVALLYPHRRQR FT SRRLAVFLEWFEALMQPHLEA" FT misc_feature complement(303386..304018) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.3e-33" FT misc_feature complement(304088..304267) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 2.8e-15" FT misc_feature complement(304133..304225) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS complement(304340..305113) FT /transl_table=11 FT /locus_tag="BPP2546" FT /product="putative short chain dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3542" FT /db_xref="GOA:Q7W7H3" FT /db_xref="HSSP:1E7W" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W7H3" FT /protein_id="CAE37840.1" FT /translation="MADHSIQGKVALIAGGAKNLGGLIARDLAAHGARAIAIHYNSPAS FT KADADATVAALQAAGAQAVALQGDLTTAAAVEKLYADALAAVGRPDIAINTVGKVLKKP FT FSEISEAEYDEMAAVNAKSAFFFLKEAGRHVNDHGKIVTLVTSLLGAFTPFYSAYAGTK FT APVEHYTRAAAKEFGARGISVTAVGPGPMDTPFFYGQESPEAVAYHQSAAALSPHSPTG FT LTHIEDVVPFIRHLVSDGWWITGQTLLINGGYTTK" FT misc_feature complement(304352..305095) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 2.6e-27" FT CDS complement(305260..306213) FT /transl_table=11 FT /locus_tag="BPP2547" FT /product="putative D-isomer specific 2-hydroxyacid FT dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP3543" FT /db_xref="GOA:Q7W7H2" FT /db_xref="HSSP:1GDH" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W7H2" FT /protein_id="CAE37841.1" FT /translation="MTTKHRIIQVGSLAGSPTANRRLADEYDVLELWQQADRAAALARH FT GKGVTALVTSANFGADAALIDALPDLKAICSWGVGYETIDVDAARKRGVLVSNTPDVLT FT DCVADLAWGLLISGARRMAQGDRFVRAGQWGQVHGSIPLGTRVSGKNLGIIGLGRIGEA FT IARRGDGFDMQVRYHNRRRRDDVSYGYESSLADLARWADFLVVATVGDPSTRHLVNQEV FT LEALGPKGLIINIARGPVIDEAALVAALQAGKLGGAALDVFEHEPSVPDALKASDETVL FT LPHIGSATFETRMAMENLMLDNLASFFKTGGVITPV" FT misc_feature complement(305362..305907) FT /note="HMMPfam hit to PF02826, D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD binding domain, score FT 3.9e-36" FT misc_feature complement(305677..305760) FT /note="PS00065 D-isomer specific 2-hydroxyacid FT dehydrogenases NAD-binding signature." FT misc_feature complement(305911..306198) FT /note="HMMPfam hit to PF00389, D-isomer specific FT 2-hydroxyacid dehydrogenase, catalytic domain, score FT 0.0093" FT misc_feature complement(306142..306213) FT /note="Signal peptide predicted for BPP2547 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.769) with cleavage site FT probability 0.733 between residues 24 and 25" FT CDS complement(306316..307287) FT /transl_table=11 FT /locus_tag="BPP2548" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3544" FT /db_xref="GOA:Q7W7H1" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W7H1" FT /protein_id="CAE37842.1" FT /translation="MNKLKSLLAAAGMAACAVGTAHAASYPDKPITMIVPFVPGGSSDI FT TARAVTPGMTKILGQSFVVENKPGANSAIGAQALARSTPDGYTMMVGSIGTFAINEALY FT KKLAYNPSKDFSYLTQAVRNPNVLVAPPSFPANTVAELIDYARKNPGKVSYASSGTGSS FT DHLSAILFRQRTDTTGVDVPYKGGGAAIADLLGAQVNVSFQNLGAVQTHIKGGKLKALA FT ITGDKRVGELPDVPTLAEAGVKDMVVYSWQGFAVPKDTPPAIVKQLAEALRTTLRDPQV FT EKTLQGLGFEVVANTPAEFSRFQQDEVKRWREVIEKGGIQLE" FT misc_feature complement(306328..307152) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 6.5e-119" FT misc_feature complement(307219..307287) FT /note="Signal peptide predicted for BPP2548 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 23 and 24" FT misc_feature complement(307240..307272) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(307369..307560) FT /transl_table=11 FT /locus_tag="BPP2549" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3545" FT /db_xref="GOA:Q7W7H0" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W7H0" FT /protein_id="CAE37843.1" FT /translation="MFAIPTNRVRGVLAALRQGSVRARLQEQGARPSGNTLEPFKAFMA FT DEARKRAQVVRQSGATVD" FT CDS 307769..308686 FT /transl_table=11 FT /locus_tag="BPP2550" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP3546" FT /db_xref="GOA:Q7W7G9" FT /db_xref="InterPro:IPR002220" FT /db_xref="UniProtKB/TrEMBL:Q7W7G9" FT /protein_id=" |