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EBI DbfetchID BX640429; SV 1; linear; genomic DNA; STD; PRO; 344321 BP. XX AC BX640429; XX DT 09-AUG-2003 (Rel. 76, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Bordetella parapertussis strain 12822, complete genome; segment 7/14 XX KW complete genome. XX OS Bordetella parapertussis OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Bordetella. XX RN [2] RP 1-344321 RA Sebaihia M.; RT ; RL Submitted (06-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: RL ms5@sanger.ac.uk XX RN [3] RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., RA Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., RA Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., RA Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., RA Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., RA Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., RA Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., RA Barrell B.G., Maskell D.J.; RT "Comparative analysis of the genome sequences of Bordetella pertussis, RT Bordetella parapertussis and Bordetella bronchiseptica"; RL Nat. Genet. 35(1):0-0(2003). XX DR EMBL-CON; BX470249. DR RFAM; RF00005; tRNA. XX FH Key Location/Qualifiers FH FT source 1..344321 FT /organism="Bordetella parapertussis" FT /strain="12822" FT /mol_type="genomic DNA" FT /db_xref="taxon:519" FT CDS complement(230..1771) FT /transl_table=11 FT /locus_tag="BPP1955" FT /product="conserved hypothetical protein" FT /note="Similar to Rhizobium loti hypothetical protein FT Mlr6294 SWALL:Q989S9 (EMBL:AP003008) (525 aa) fasta scores: FT E(): 8.7e-25, 28.21% id in 514 aa, and to Agrobacterium FT tumefaciens hypothetical protein Atu3928 or Agr_l_1835 FT SWALL:AAL44736 (EMBL:AE009323) (492 aa) fasta scores: E(): FT 1.1e-24, 27.18% id in 434 aa" FT /db_xref="InterPro:IPR015995" FT /db_xref="UniProtKB/TrEMBL:Q7W920" FT /protein_id="CAE37254.1" FT /translation="MGRPRRMNPFTMPAMQKTRIAVLHFSHETVTFLERDTELDDFVFD FT GSPCRDEVLLGYDAKGYLGGFVQCAREYTEVELVGIESPLFPKTGIGSGWVTHEAYEHF FT LGIMLDDLAQRGPFDGVYMALHGAMAVRGVERPEADIARRVRQVVGEAAILAATFDPHG FT NEDEQFLQAADLAFCVKYFPHYDMHLQGERAARTMVRAIRGEYRPATMTVKVPILTPTV FT LQWTGGNSPWLQLVHRALTWEAREPDAYVNVFFGFPWADVPDVGMTIQTLTNGKPELAQ FT RIARDMAQAAWRARHDLLNAARIEPIERGVASARQETANGNAPVVLADYSDRSGAATWT FT LQELVRTGARRTLIATVADYELVSRLKQRGARAGDAFDEQVGGRVDDSAGEPVRIQGRI FT LGHGQSQDGTNSRSDWYTVAFGDGNVLVVSAYLMQITEREMLEQMGMTLADFDIFVIKS FT RAHFRRGFDDSGFARTIILVEPPHPFLGTIHLDALPYRNVKVENYFPYGEPDFNP" FT CDS complement(1833..2813) FT /transl_table=11 FT /locus_tag="BPP1956" FT /product="putative exported protein" FT /note="Similar to Comamonas testosteroni OrfJ protein FT SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): FT 1.2e-36, 34.07% id in 314 aa, and to Rhizobium meliloti FT hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 FT (EMBL:AE007292) (330 aa) fasta scores: E(): 3.6e-39, 35.06% FT id in 328 aa" FT /db_xref="GOA:Q7W919" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W919" FT /protein_id="CAE37255.1" FT /translation="MTLTRTLALAAALALSCPAAAQQASETWPDKPITMIIPSAAGGSA FT DIFTRITMTHLGKALNANIVIENKPGAAGSIGMASIKRARPDGSTFGYGNINTLTVNPA FT LFNKLPYDADADFTPVGAMFSVANVLVVPGNSPYQNLGELIAATKKAPGKLSYAAAGIG FT SSGHMGGELLKSMAGIDVLFVPYNGDPASLQDLTGGRIDYTVTNISVAMPLVESGKLKA FT LAITSRERDNAHPDIPTFSESGLPGFENISWGGLILPKGVPEPIVQKISAALKTVMQSD FT ALRRDLGAAGGNAGTVFGDDFRRFIDTEQQKWAKVIADAGIEKQN" FT misc_feature complement(1848..2672) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 4.4e-83" FT misc_feature complement(2502..2813) FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT misc_feature complement(2751..2813) FT /note="Signal peptide predicted for BPP1956 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.815 between residues 21 and 22" FT misc_feature complement(2763..2795) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 3108..3740 FT /transl_table=11 FT /locus_tag="BPP1957" FT /product="conserved hypothetical protein" FT /note="Similar to Ralstonia solanacearum hypothetical FT protein Rsp1517 or Rs04794 SWALL:Q8XPW9 (EMBL:AL646085) FT (214 aa) fasta scores: E(): 2.5e-32, 50% id in 202 aa, and FT to Streptomyces coelicolor hypothetical 23.9 kDa protein FT Scf43a.12C SWALL:Q9XAA3 (EMBL:AL096837) (226 aa) fasta FT scores: E(): 2.5e-14, 32.68% id in 205 aa" FT /db_xref="InterPro:IPR013559" FT /db_xref="UniProtKB/TrEMBL:Q7W918" FT /protein_id="CAE37256.1" FT /translation="MAKRQGSKENQALVEQVMQIAAGLGETLAPFTEVVVHDLRTPRHA FT ILAIHNNLSGRTVGDPATELGLARIADNNYPQIIANYPNKFADGRRSKSTSIGIKDSEG FT RYVAALCLNVDVTLFKGLASILEKFSSVEGDTVRESLDPASADAIRARIDQFALDLATT FT PQALGAEHRRALMQQLRDEGYLDLRRAKETVAEHLGVSRATVYKAIK" FT CDS 3851..4561 FT /transl_table=11 FT /gene="aqpZ" FT /gene_synonym="bniP" FT /locus_tag="BPP1958" FT /product="aquaporin Z" FT /note="Similar to Escherichia coli aquaporin Z AqpZ or BniP FT or B0875 SWALL:AQPZ_ECOLI (SWALL:P48838) (231 aa) fasta FT scores: E(): 7.9e-60, 73.66% id in 224 aa, and to Shigella FT flexneri aquaporin-Z AqpZ SWALL:O68874 (EMBL:AF055905) (231 FT aa) fasta scores: E(): 6.3e-59, 72.32% id in 224 aa" FT /db_xref="GOA:Q7W917" FT /db_xref="InterPro:IPR000425" FT /db_xref="UniProtKB/Swiss-Prot:Q7W917" FT /protein_id="CAE37257.1" FT /translation="MQPLFKRCGAEFFGTFWLVLGGCGSAVLAAGVPQVGIGYAGVALA FT FGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLAS FT IAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG FT FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVG FT ALAYRLVGTPSAQR" FT misc_feature 3851..3937 FT /note="Signal peptide predicted for BPP1958 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.883) with cleavage site FT probability 0.833 between residues 29 and 30" FT misc_feature 3851..4528 FT /note="HMMPfam hit to PF00230, Major intrinsic protein, FT score 1.3e-52" FT misc_feature join(3887..3946,3956..4024,4112..4180,4247..4315, FT 4334..4402,4472..4540) FT /note="6 probable transmembrane helices predicted for FT BPP1958 by TMHMM2.0 at aa 13-32, 36-58, 88-110, 133-155, FT 162-184 and 208-230" FT misc_feature 4040..4066 FT /note="PS00221 MIP family signature." FT CDS complement(4600..4872) FT /transl_table=11 FT /locus_tag="BPP1959" FT /product="conserved hypothetical protein" FT /note="Similar to Haemophilus influenzae hypothetical FT protein Hi1406 SWALL:YE06_HAEIN (SWALL:P44181) (118 aa) FT fasta scores: E(): 1.6, 26.66% id in 90 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W916" FT /protein_id="CAE37258.1" FT /translation="MQRDFDLVVAILRTIADADLPALAIDQIETAVVDENGNGVAVEWV FT AHHLDIMADAGLVKAVDGGAWRLTWQGYDALEQDDEDEDDDALPM" FT CDS 5032..6456 FT /transl_table=11 FT /gene="hemN" FT /locus_tag="BPP1960" FT /product="oxygen-independent coproporphyrinogen III FT oxidase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1494" FT /db_xref="GOA:Q7W915" FT /db_xref="HSSP:1OLT" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/TrEMBL:Q7W915" FT /protein_id="CAE37259.1" FT /translation="MSDTLIPERFADAPRSRPVFPDSLLSRLDKSGPRYTSYPTADRYH FT DGFGARDYHQALAERTASRRGEPMSLYVHVPFCDSVCYYCACNKVVTRHHERAAPYLDA FT LGQELALQVEALGSGEPVSHLHLGGGTPTFLSDAELTRLMAMLRGAFTLTPDAEVSIEV FT DPRTADRGRLAHLRELGFNRLSFGVQDFDPRVQQAVHRVQPFEDVRQLMLAARELGFGS FT INVDLIYGLPHQTLASFARTVEQVGELRPDRIALYAYAHLPQRFASQRRILAADLPDAS FT TRVGLLGDAIAGFLELGYVYIGMDHFALPDDALAVARREGRLHRNFQGYTAQPDGDLIA FT LGVSAIGKVGNVYSQNVKTLDAYYGALAQARLPIERGLRLSADDELRRRLIMAVMCRGR FT LALAELGGSAGAPASAAFGPELARLRELAGLGLVTLDAEVIQVTELGWYFVRAVAMTFD FT RYLREAAPAASYSRIV" FT misc_feature 5377..6138 FT /note="HMMPfam hit to PF02473, Oxygen-independent FT Coproporphyrinogen III oxidase, score 4.5e-140" FT CDS complement(6453..6845) FT /transl_table=11 FT /locus_tag="BPP1961" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1495" FT /db_xref="UniProtKB/TrEMBL:Q7W914" FT /protein_id="CAE37260.1" FT /translation="MAKHHQASGTLCVQWLCPGPAQQRALLELALRCLRDDRLEIRRAL FT RQRDNATVRERLHRAKGAICTLWPDPETLARLEAVHRQLPRRGSQLWSQAAALESRLLQ FT LEQAMLASLDALGGDPIAQEQQPAPP" FT CDS complement(6851..7663) FT /transl_table=11 FT /locus_tag="BPP1962" FT /product="probable two-component response regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1496" FT /db_xref="GOA:Q7W913" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q7W913" FT /protein_id="CAE37261.1" FT /translation="MSLVTPGIEGVPMPHRLSHAAPVLAGQACAAHPPATYPSSAQPAV FT ASARRYMLLSRPSRRLRVAILDDHPAVAVGLSAYLGEHGDFEVALTETNAVALAHQLKR FT HPCDAAVIDFFMPAQSWDGVDFIRRLRRPCPDMAVITISAGKAHETEYAAFRAGANGFL FT PKGAPLSLLAELIRTTVVSRRAFFSARTGQLRATIPDPPDSRLTNAEREILRQIAQGFS FT VTQISGRLLRSKKTVSTHKRRAMKKLGLADDLALALYLSENFEQNVYG" FT misc_feature complement(6860..7057) FT /note="HMMPfam hit to PF00196, Bacterial regulatory FT proteins, luxR family, score 2.6e-16" FT misc_feature complement(6923..7006) FT /note="PS00622 Bacterial regulatory proteins, luxR family FT signature." FT misc_feature complement(7115..7483) FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 2.4e-13" FT CDS 8015..9964 FT /transl_table=11 FT /gene="thrS" FT /locus_tag="BPP1963" FT /product="threonyl-tRNA synthetase" FT /EC_number="6.1.1.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP1497" FT /db_xref="GOA:Q7W912" FT /db_xref="HSSP:1EVL" FT /db_xref="InterPro:IPR012947" FT /db_xref="UniProtKB/Swiss-Prot:Q7W912" FT /protein_id="CAE37262.1" FT /translation="MVQITLPDGSQRQYPGPVTVAEVAQSIGAGLAKAALAGRVAFDGA FT EPRLVDTSFRIDNDAQLAIVTAKDADGLDLIRHSTAHLLAYAVKSLFPDAQVTIGPVID FT NGFYYDFSYKRPFTPEDLQAIEKKMAELARKDEVVTREEWSRDEAVAYFKGIGEVYKAE FT IIASIPSNETLSLYREGDFIDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEMLQRI FT YGTAWASKDDQDAYLHMLEEAERRDHRKIGRELDLFHFQDEAPGLIFWHPKGWALWQQV FT EQYMRKVYQDNGYQEVKAPQILDLTLWKKTGHWDNYRENMFTTESENRVYGLKPMNCPG FT HVQIFNAGLHSYRELPLRYGEFGQCHRNEPSGSLHGMMRVRGFTQDDGHIFCTEDQLQD FT ECAAFTALLQKVYKDFGFTEVLYKVATRPEKRIGSDEIWDKAETALMESLRRTGCEFEI FT SPGEGAFYGPKVEYTLKDAIGRHWQCGTIQVDFSMPVRLGAEYVDQNDQRRPPVMLHRA FT ILGSLERFIGMLIENHAGAMPPWLAPLQAVVCCISEHSAEYAAQITQSLKKQGFRVQAD FT LRGEKITRKIREHSLQKIPYLLVVGDKEMQNGTVAVRGLGGLDLGVIALDDFIARLAED FT ISTRRNVTQLASAA" FT misc_feature 8015..8212 FT /note="HMMPfam hit to PF02824, TGS domain, score 3.6e-06" FT misc_feature 8810..9271 FT /note="HMMPfam hit to PF00587, tRNA synthetase class II FT core domain (G, H, P, S and T), score 1.5e-55" FT misc_feature 9110..9175 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT misc_feature 9569..9598 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature 9629..9919 FT /note="HMMPfam hit to PF03129, Anticodon binding domain, FT score 1.8e-28" FT CDS 10036..10530 FT /transl_table=11 FT /gene="infC" FT /gene_synonym="fit" FT /locus_tag="BPP1964" FT /product="translation initiation factor IF-3" FT /note="ortholog of Bordetella pertussis (BX470248) BP1498" FT /db_xref="GOA:Q7W911" FT /db_xref="InterPro:IPR019813" FT /db_xref="UniProtKB/Swiss-Prot:Q7W911" FT /protein_id="CAE37263.1" FT /translation="MRLIGLDGEQLGIVKIADAFRLSEQSDVDLVEIAPNADPPVCRLM FT DYGKFKYQEQKRQAEARSKQKVIQVKEVKFRPATDEGDYQVKLRNLRRFLEEGDKAKVT FT LRFRGREMAHQELGMRVLERVRDDLIELAQVEAMPKLEGRQMVMVLAPRKKAVGKPDAA FT G" FT misc_feature 10036..10497 FT /note="HMMPfam hit to PF00707, Translation initiation FT factor IF-3, score 4.5e-90" FT misc_feature 10162..10203 FT /note="PS00938 Initiation factor 3 signature." FT CDS 10667..11623 FT /transl_table=11 FT /gene="gshB" FT /gene_synonym="gsh-II" FT /locus_tag="BPP1965" FT /product="glutathione synthetase" FT /EC_number="6.3.2.3" FT /note="ortholog of Bordetella pertussis (BX470248) BP1499" FT /db_xref="GOA:Q7W910" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/Swiss-Prot:Q7W910" FT /protein_id="CAE37264.1" FT /translation="MHVLFIIDPLPLLKAYKDSSVAMMQALQARGHTLSVALQGDLYID FT AGEVRTRFAPIALRDGADLHGHDWWRETGAADEAPLARFDAVVMRKDPPFDMEYVYSTH FT LLEYAQQQGARVFNSGAAIRNHPEKLAITEFPDLTTPTLVTRDMGRIRAFHAAQGDVIV FT KPLDGMGGTGIFRLQRSEPNLNAILETLTDNGTRTIMAQRYIPEIVKGDKRILLIGGEP FT VPYSLARIPLAGETRGNLAAGGRGVAQPLSERDLHLARTVADRLAGRGLLLVGLDVIGD FT YITEVNVTSPTCFVEITEQTGFNVPEMFAVALESAAG" FT misc_feature 10667..11038 FT /note="HMMPfam hit to PF02951, Prokaryotic glutathione FT synthetase, N-terminal domain, score 5.1e-27" FT misc_feature 11048..11593 FT /note="HMMPfam hit to PF02955, Prokaryotic glutathione FT synthetase, ATP-binding domain, score 4.1e-36" FT CDS 11634..12032 FT /transl_table=11 FT /locus_tag="BPP1966" FT /product="putative IIa component of sugar transport PTS FT system" FT /note="ortholog of Bordetella pertussis (BX470248) BP1500" FT /db_xref="GOA:Q7W909" FT /db_xref="InterPro:IPR004701" FT /db_xref="UniProtKB/TrEMBL:Q7W909" FT /protein_id="CAE37265.1" FT /translation="MTGIVIVVHAPLGSAMRESVAHVLGDATEALAVHDIHPEDLPDDA FT APRVLADILRVDQGQGVLVLTDLIGATPANIAKRAVADAQAQGIQCCVLAGLNTPMLLR FT ALTYRNLSLAETREKALAGGVQGCLRVD" FT misc_feature 11658..11945 FT /note="HMMPfam hit to PF03610, PTS system fructose IIA FT component, score 1.3e-11" FT CDS 12148..12417 FT /transl_table=11 FT /gene="ptsH" FT /gene_synonym="phbH" FT /locus_tag="BPP1967" FT /product="phosphocarrier protein HPr" FT /note="ortholog of Bordetella pertussis (BX470248) BP1501" FT /db_xref="GOA:Q7W908" FT /db_xref="HSSP:1MU4" FT /db_xref="InterPro:IPR002114" FT /db_xref="UniProtKB/TrEMBL:Q7W908" FT /protein_id="CAE37266.1" FT /translation="MPSSDIVISNKLGLHARAAAKLTQLASRFSSEIFISRGAQRVNAK FT SIMGVMMLAAGLGVTVKLEASGSDADQALSEIQTLFDNKFGEQE" FT misc_feature 12148..12399 FT /note="HMMPfam hit to PF00381, PTS HPr component FT phosphorylation site, score 7.7e-31" FT misc_feature 12184..12207 FT /note="PS00369 PTS HPR component histidine phosphorylation FT site signature." FT misc_feature 12262..12309 FT /note="PS00589 PTS HPR component serine phosphorylation FT site signature." FT CDS 12539..14233 FT /transl_table=11 FT /gene="ptsI" FT /locus_tag="BPP1968" FT /product="phosphoenolpyruvate-protein phosphotransferase" FT /EC_number="2.7.3.9" FT /note="ortholog of Bordetella pertussis (BX470248) BP1502" FT /db_xref="GOA:Q7W907" FT /db_xref="HSSP:1EZC" FT /db_xref="InterPro:IPR018274" FT /db_xref="UniProtKB/TrEMBL:Q7W907" FT /protein_id="CAE37267.1" FT /translation="MARGYAIGRAVVMGAAALEVAHYRIAPEDVAAESQRLTEALAKAQ FT ADLLQMADTLPEDAPRELGAMLNVHRLLLGDPLLAEQALALIAERHYNAEWALTAQGQI FT LGQQFEAMEDEYLRERGGDVRQVIERALHVLAGTSAMLPDGAQLDGDDPLVVVAHDISP FT ADMLRLRGGRFAAFVTDLGGPTSHTAIVARSMGVPAVVALGNVRELVRDGDMLIVDGAD FT GVVVLNPSARILAEYQARQRVYADERAELALLRDEPAVTLDGIDIVLHANIELPEEASL FT SLACGAHGIGLFRSEFLFMGRPDLPGEEEQYEAYASVVKVMAGRPVTIRTLDIGADKTL FT DDEATVATNPALGQRAIRYCLARPEMFATQLRAILRASAHGPVRVLIPMIAHMHEVHAA FT YAALESARRELDARGQPYAARVEVGAMVEIPAIAIAIEPFVQPLDFLSIGTNDLIQYTL FT AIDRGDHDVAGLYDPLHPAVLRLVANTINAGERAGKPVAVCGEMAGDARLTRLLLGLGL FT TEFSMHPQQLLDVKREVRRAHSNALRVKVAAALNRALPIDPDTLDAL" FT misc_feature 12923..13207 FT /note="HMMPfam hit to PF00391, PEP-utilizing enzyme, mobile FT domain, score 3.1e-24" FT misc_feature 13082..13117 FT /note="PS00370 PEP-utilizing enzymes phosphorylation site FT signature." FT misc_feature 13280..14161 FT /note="HMMPfam hit to PF02896, PEP-utilizing enzyme, TIM FT barrel domain, score 3.4e-127" FT misc_feature 13868..13924 FT /note="PS00742 PEP-utilizing enzymes signature 2." FT CDS complement(14398..14622) FT /transl_table=11 FT /locus_tag="BPP1968A" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1503" FT /db_xref="UniProtKB/TrEMBL:Q7W906" FT /protein_id="CAE37268.1" FT /translation="MTTSSRGARRPGASARAWRKPALLAPMRRNHRMLAPALVHGMQDF FT ADCIEKPGGAGLDSPPPAAPHGYQGGAPG" FT CDS complement(14619..15044) FT /transl_table=11 FT /gene="osmC" FT /locus_tag="BPP1969" FT /product="osmotically inducible protein C" FT /note="ortholog of Bordetella pertussis (BX470248) BP1504" FT /db_xref="GOA:Q7W905" FT /db_xref="HSSP:1QWI" FT /db_xref="InterPro:IPR019904" FT /db_xref="UniProtKB/TrEMBL:Q7W905" FT /protein_id="CAE37269.1" FT /translation="MKKTASAVWKGDLKSGQGTISSQSGALKNQPYGFNTRFADQPGTN FT PEELLGAAHAGCFSMALSNILGEAGLKADSIETTAEVTLDKTDDGFTITAVHLTVNAVV FT PGATKDSFADAAAKAKAGCPVSKVLNARISMDATLKG" FT misc_feature complement(14625..15041) FT /note="HMMPfam hit to PF02566, OsmC-like protein, score FT 1.2e-36" FT CDS 15219..16169 FT /transl_table=11 FT /locus_tag="BPP1970" FT /product="putative ornithine cyclodeaminase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1505" FT /db_xref="GOA:Q7W904" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W904" FT /protein_id="CAE37270.1" FT /translation="MLQIDAEHTRRALRFTAVIDALRDAFRGGVHVPPRHVHAIESGGA FT QGTTLIMPAWNDAGYFGVKVINIFPANTHQGLPGLHATYTLYSARTGVPLAQVDGDVVT FT AYRTAGAAALGASYLARADARVLLILGSGRIAGLVAPAMRAVRPIERVLVWNVRPAGAQ FT RLAGELREQGFDAQAVTDLQAAVGQADIVSCATLSTEPLVRGEWLRPGMHLDLIGSFTP FT EMKETDPQCFAGTSVYVDTDEAPTKAGDLLEAFAAGTLARTQIRGTLADLVAGRAAGRR FT DAAEITVFKAVGSALEDLTLAALVYEARQGDVQAQ" FT misc_feature 15219..16154 FT /note="HMMPfam hit to PF02423, Ornithine FT cyclodeaminase/mu-crystallin family, score 6.7e-57" FT CDS 16211..17371 FT /transl_table=11 FT /locus_tag="BPP1971" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1506" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q7W903" FT /protein_id="CAE37271.1" FT /translation="MSTLLARLAVLATALVPAFAAQAEVVIGVDVSTTGPAAAIGIQTN FT NAIRLWPATLGGEPARYVVLDDGTDVSRAVKNMRKLTSEDKVDAIVGPNTTAAALAGLD FT VLAETRTPMIALAASAVIVEPMSDPKRAWAFKMPQNDSLMASVLVQDMKKKGVKTVAFI FT GFADSYGDSWWKEFSQAAGDDLKIVAQERFQRTDASVVGQVLKVIAAKPDAVLIAGAGT FT PSALPQKTLLERGYAGKVYQTHGIGTLEFLQVGGRDVEGTLFPTGPGVVARELPDSNPV FT KKVAVEFADKYEAQYGANTLTQFAGDAYGAWILLDSAVARALKTGAKPGTPEFRAALRD FT ALENTRDLTVPNGVLNISAENHQGFDERARVMGVVRNGRFSYAGQP" FT misc_feature 16211..16279 FT /note="Signal peptide predicted for BPP1971 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.822 between residues 23 and 24" FT CDS 17532..18452 FT /transl_table=11 FT /locus_tag="BPP1972" FT /product="putative extracellular solute-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1507" FT /db_xref="GOA:Q7W902" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q7W902" FT /protein_id="CAE37272.1" FT /translation="MLMRRFNFVKWGLLMVGAGLLAACSDSDSSDPGAAQQPAAQSAST FT LDAAKAAGKIRIGYANEAPYAYMDSKEARVTGESVEIARVVLKRMGIDEVEGVLTEFGS FT LIPGLQAKRFDIIAAGMYVTPERCQQVAFSDPTYGVGQAFLVQKGNPKNLHSYADVAKN FT GEAKLGVVVGAIEAEYATKQEIPAGQVVVFPGAVSALSGIEAGRADAYAATALTVNDLM FT HKTSAGDKLEKADPFTDPTVDGKSVRGYGAFAFRKDDQAFADAFNAELKKFVGSDEHRK FT LVEPFGFTAGELPGDVTAAKLCAAQ" FT misc_feature 17532..17618 FT /note="Signal peptide predicted for BPP1972 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.996) with cleavage site FT probability 0.225 between residues 29 and 30" FT misc_feature 17571..17603 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 17694..18401 FT /note="HMMPfam hit to PF00497, Bacterial extracellular FT solute-binding proteins, family 3, score 7.8e-53" FT CDS 18465..19106 FT /transl_table=11 FT /locus_tag="BPP1973" FT /product="putative inner membrane component of FT binding-protein-dependent transport system" FT /note="ortholog of Bordetella pertussis (BX470248) BP1508" FT /db_xref="GOA:Q7W901" FT /db_xref="InterPro:IPR014342" FT /db_xref="UniProtKB/TrEMBL:Q7W901" FT /protein_id="CAE37273.1" FT /translation="MDNTWSLLPPLLDGLAVTLRIAAGAAALAIPLALAAGLARLSASP FT WLRAPAAVYVEVFRGTSALVRLFWFYFVLPMFGMKLPALLVGIVVLGANAGAYGAEVVR FT GAILAVPAGQREAAVALNLTRARTIWRIILPQAVPAMLPPTGNLLIELLKNTALVSLIT FT ITDLTFRGQLLRSETLRTTEIFTLVLLLYFAVALVITGGIRMLERRFKVR" FT misc_feature 18465..18569 FT /note="Signal peptide predicted for BPP1973 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.871) with cleavage site FT probability 0.763 between residues 35 and 36" FT misc_feature join(18507..18575,18663..18731,19014..19082) FT /note="3 probable transmembrane helices predicted for FT BPP1973 by TMHMM2.0 at aa 15-37, 67-89 and 184-206" FT misc_feature 18780..18992 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 2.3e-12" FT CDS 19103..19774 FT /transl_table=11 FT /locus_tag="BPP1974" FT /product="putative inner membrane component of FT binding-protein-dependent transport system" FT /note="ortholog of Bordetella pertussis (BX470248) BP1509" FT /db_xref="GOA:Q7W900" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q7W900" FT /protein_id="CAE37274.1" FT /translation="MSPIFDWGFALEILPMLGSALVITVQATLLGMLVAVTLGLALALL FT RRSPFWPVSALTALVIEFVRSTPLLVQMYFLFYVLPVTGWQMSPLTTGILALGLHYAAY FT CAEVYRAGIEAVPRGQHEAATALNLSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTP FT LLSAITVVELLQQSKIIGSTTFRYTEPLTLVGVLFLLLSLVAAWGVRRLEARLKLYGGK FT R" FT misc_feature join(19169..19237,19250..19318,19346..19414,19505..19573, FT 19661..19729) FT /note="5 probable transmembrane helices predicted for FT BPP1974 by TMHMM2.0 at aa 23-45, 50-72, 82-104, 135-157 and FT 187-209" FT misc_feature 19436..19669 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.9e-15" FT CDS 19771..20541 FT /transl_table=11 FT /locus_tag="BPP1975" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1510" FT /db_xref="GOA:Q7W8Z9" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8Z9" FT /protein_id="CAE37275.1" FT /translation="MSASIRLAKLCKRYGDLDVLRGIDLEIPAGQTVSVIGPSGSGKST FT LLRLLMTLDRPTSGAIEIDGESMWHDAQGREMGPNSAHVRRVRGKIGMVFQHFNLFPHK FT TALGNVIEAPLYVLGLSRDEAVARGREYLDMVGLGDKLDAYPAQLSGGQKQRVGIARAL FT AMCPEVMLFDEVTSALDPELVGGILQILRDLAARRTMTMIIVTHQMKFAERSSDRTLFF FT DEGNIVEDAESAQLFAAPREPRTQQFLQSVIEAA" FT misc_feature 19858..20445 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 5.8e-65" FT misc_feature 19879..19902 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 20215..20259 FT /note="PS00211 ABC transporters family signature." FT CDS complement(20538..20987) FT /transl_table=11 FT /gene="dut" FT /gene_synonym="dnaS" FT /locus_tag="BPP1976" FT /product="deoxyuridine 5'-triphosphate nucleotidohydrolase" FT /EC_number="3.6.1.23" FT /note="ortholog of Bordetella pertussis (BX470248) BP2578" FT /db_xref="GOA:Q7W8Z8" FT /db_xref="InterPro:IPR008181" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8Z8" FT /protein_id="CAE37276.1" FT /translation="MKSVDLKILDARMREYLPAYATPGSAGLDLRACTEASLVIEPGQT FT VLVPTGLAIHIGDPRYAAMILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSTWNRGTQ FT PFTLDPMERLAQLVIVPVQQVAFNVVEDFDASERGAGGFGSTGRA" FT misc_feature complement(20547..20948) FT /note="HMMPfam hit to PF00692, dUTPase, score 1.1e-44" FT CDS complement(21081..21578) FT /transl_table=11 FT /locus_tag="BPP1977" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2584A" FT /db_xref="UniProtKB/TrEMBL:Q7W8Z7" FT /protein_id="CAE37277.1" FT /translation="MAIDGEPKNGDFARYIEELSRTGGAPGQVLPAQRAPAAAQSGVAG FT KLSELTWGKRPERTAPAPLPASGAEQAAPPPTLAASASARRMALFLTIGALIAGWNALS FT FFVAALTSGRLDIDTMMPALFLAIAAWMLFKGARNLRAGRRGQLPKLPPLSTLPKGPNH FT RG" FT misc_feature complement(join(21168..21218,21249..21314)) FT /note="2 probable transmembrane helices predicted for FT BPP1977 by TMHMM2.0 at aa 104-126 and 136-153" FT CDS complement(join(21623..21676,21676..22254)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP1978" FT /product="DedA-family integral membrane protein FT (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP2585" FT /db_xref="PSEUDO:CAE37278.1" FT misc_feature complement(join(21664..21729,21760..21825,22012..22077, FT 22090..22155)) FT /note="4 probable transmembrane helices predicted for FT BPP1978 by TMHMM2.0 at aa 33-55, 59-81, 143-165 and FT 175-197" FT misc_feature complement(21718..22194) FT /note="HMMPfam hit to PF00597, DedA family, score 1e-16" FT CDS 22327..23397 FT /transl_table=11 FT /locus_tag="BPP1979" FT /product="integral membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2586" FT /db_xref="InterPro:IPR007404" FT /db_xref="UniProtKB/TrEMBL:Q7W8Z6" FT /protein_id="CAE37279.1" FT /translation="MDVSGIEQRRNYMDSVTQVVLGAAIQGSMLGRSQGRKALLYGGLL FT GTLPDLDVLMRYPDPVSLMTYHRGFSHSILVLTALAAVMAWLIRRRWPDAPYSGRRLFA FT TLLLVLVTHPVLDAFTVYGTQLFWPFPLVPESWSAVFIIDPVYTVPMLAAVLVAAWRGM FT TPATCRGLAATVLFGAAYLLVALTGRFQAETSVTAALRERGEQVEAVLATPMPFNTLLW FT RVIAKTGDGAYYEAVSGRFDRQPPEMARLPLHTDVGQALAGVPLHERLRWFTNDWLRYD FT ALGDALVVTDLRMGIAGYYTFRFVMAERDGDRWRAVTPRRWPSDRGNWEQMRLTLARIV FT GSQPLPLARWARQAEN" FT misc_feature join(22438..22491,22534..22593,22630..22698,22735..22803, FT 22822..22890) FT /note="5 probable transmembrane helices predicted for FT BPP1979 by TMHMM2.0 at aa 38-55, 70-89, 102-124, 137-159 FT and 166-188" FT CDS complement(23394..23867) FT /transl_table=11 FT /locus_tag="BPP1980" FT /product="putative AsnC-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1749" FT /db_xref="GOA:Q7W8Z5" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q7W8Z5" FT /protein_id="CAE37280.1" FT /translation="MQLDAIDHRILGILQRDADISNAVLAERVGLSASACLRRVARLKE FT SGVIRRIVAVLDPACVERPLSAIVTVEFARHGSEYRRTFMEQVALEPAVTQCYMVTGEV FT SCVLIVHMRDMDEYLAFADRLFDQDDNVQAFYTHIVMQTVKDEPVVAVPAAPR" FT misc_feature complement(23478..23789) FT /note="HMMPfam hit to PF01037, AsnC family, score 7.3e-25" FT CDS join(24029..24274,24278..24967) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP1981" FT /product="putative membrane protein (pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1750" FT /db_xref="PSEUDO:CAE37281.1" FT misc_feature 24029..24100 FT /note="Signal peptide predicted for BPP1981 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.900 between residues 24 and 25" FT misc_feature join(24047..24115,24182..24250,24269..24337,24515..24583, FT 24851..24919) FT /note="5 probable transmembrane helices predicted for FT BPP1981 by TMHMM2.0 at aa 7-29, 52-74, 81-103, 163-185 and FT 275-297" FT variation 24275..24277 FT /note="In-frame TAG stop codon in parapertussis; CAG in FT pertussis" FT CDS complement(24969..26177) FT /transl_table=11 FT /gene="dfp" FT /locus_tag="BPP1982" FT /product="DNA/pantothenate metabolism flavoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1751" FT /db_xref="GOA:Q7W8Z4" FT /db_xref="HSSP:1E20" FT /db_xref="InterPro:IPR003382" FT /db_xref="UniProtKB/TrEMBL:Q7W8Z4" FT /protein_id="CAE37282.1" FT /translation="MLDLARKRIVLGLTGGIACYKIAELVRRMTEQGAVVDVVMTEAAT FT HFITPVTMQALSGRPVFVDAWDARVDNNMAHIDLTRGADAVLIAPASADFMAKLAHGLA FT DDLLSTLCLARACPLLVAPAMNREMWANPATQRNVAQLRADGIAVLGPAAGEQACGETG FT TGRMLEAHELLADLIASFQPKVLAGRHVLLTAGPTSEPVDPVRVLSNRSSGKTGYALAR FT AAHEAGARVTLITGATALAIPRGVTALHVTTARQMHDAVMANANDADIFVAVAAVADWR FT VKNVSEQKLKKTTEGGGAPALEFEPNPDILAEVAKLASGPWCVGFAAETEKLAEHAEAK FT RLRKGIPLLVGNLAHKVMDADTTELVLFDEHGVHPLPAAAKLDAARRLIAEIAARLPAP FT ARP" FT misc_feature complement(25806..26159) FT /note="HMMPfam hit to PF02441, Flavoprotein, score 6.9e-41" FT CDS complement(26282..26788) FT /transl_table=11 FT /gene="lspA" FT /locus_tag="BPP1983" FT /product="lipoprotein signal peptidase" FT /EC_number="3.4.23.36" FT /note="ortholog of Bordetella pertussis (BX470248) BP1752" FT /db_xref="GOA:Q7W8Z3" FT /db_xref="InterPro:IPR001872" FT /db_xref="UniProtKB/TrEMBL:Q7W8Z3" FT /protein_id="CAE37283.1" FT /translation="MTQARAAAPRLAPWLAAAALIIVLDQATKLYFDGAFQYGERLNVL FT PFFDFTLLYNRGAAFSFLASEEGWQRWFFTALGVGASIVIVWLLRRTAGQPRFSLALTL FT IMGGALGNVIDRVAYGHVVDFLLFYWRDWHYPAFNLADVAITCGAVLLVVDELLRARKR FT PTVQD" FT misc_feature complement(26294..26755) FT /note="HMMPfam hit to PF01252, Signal peptidase (SPase) II, FT score 2.9e-55" FT misc_feature complement(join(26327..26383,26429..26494,26522..26572, FT 26717..26767)) FT /note="4 probable transmembrane helices predicted for FT BPP1983 by TMHMM2.0 at aa 7-24, 72-89, 98-120 and 135-154" FT CDS complement(26791..29652) FT /transl_table=11 FT /gene="ileS" FT /gene_synonym="ilvS" FT /locus_tag="BPP1984" FT /product="isoleucyl-tRNA synthetase" FT /EC_number="6.1.1.5" FT /note="ortholog of Bordetella pertussis (BX470248) BP1753" FT /db_xref="GOA:Q7W8Z2" FT /db_xref="HSSP:1FFY" FT /db_xref="InterPro:IPR013155" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8Z2" FT /protein_id="CAE37284.1" FT /translation="MDYKKSLNLPDTPFPMRGDLAKREPGWVAEWEETQVYQAIRAASR FT GRPRFVLHDGPPYANGDIHIGHAVNKILKDIIVKSRNMAGYDAHYVPGWDCHGMPIEIQ FT IEKKYGKHLPVTEVQSKARAYALEQIDRQRKDFKRLGVLGDWHNPYLTMNFSNEADEIR FT VLGRILEKGYVFRGLKPVNWCFDCGSALAEAEVEYADRVDPAIDVAFPFTDRGALARAF FT GLDEVDAGAIVIWTTTPWTIPSNQALNVHPEIDYALVRVTPTPVHGPLLLLAQERVEPS FT LKAWGLEGEIIATAKGEALEGLRFRHPLAAAAQGYDRTSPIYLGDYVTLDTGTGVVHSA FT PAYGIEDFVSCKAHGLADSDILGPVMGDGKFVDSLPLFGGLSIWDANPRIVEALKLAGS FT LMLVQKLSHSYMHCWRHKTPVIYRATSQWFAGMDVKPRDGGPSLRESALAGIDATAFYP FT AWGRARLHAMIANRPDWTLSRQRQWGVPMAFFVHKETGELHPRTVELLEQVAQRVEKGG FT IEAWQSLDPRELLGDEAELYEKNRDTLDVWFDSGSTHATVLGGKDGVLGSSHGAELAWP FT ADLYLEGSDQHRGWFHSSLLTGCMLYGHPPYKGLLTHGFVVDGQGRKMSKSVGNVIAPQ FT KVSDSLGAEILRLWVASTDYSGELSISDEILKRVVESYRRIRNTLRFLLANVADFDAVG FT QAVPYGELFEIDRYALAMTAQMQAEVQGHYERYDFHPAVSRLQTFCSEDLGAFYLDILK FT DRLYTTAAGSAARRSAQTALLDITQTLLKLMAPILSFTAEEAWKVLAGSALAKQADAPR FT VTIFTEVYHALPPFADGEALTAKWTRLRAIRAEVQRKLEEVRSAGAIGSSLQAEVDLYA FT NAADHDILASLGDDLRFVLIVSRATVHADADDLRIEIAASGHKKCERCWHWRPDVGQDA FT DHPEICGRCVSNLFGAGEPRTRA" FT misc_feature complement(27667..29577) FT /note="HMMPfam hit to PF00133, tRNA synthetases class I (I, FT L, M and V), score 8.9e-247" FT misc_feature complement(29449..29484) FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT CDS complement(29642..30607) FT /transl_table=11 FT /gene="ribF" FT /locus_tag="BPP1985" FT /product="riboflavin biosynthesis protein" FT /EC_number="2.7.1.26" FT /note="ortholog of Bordetella pertussis (BX470248) BP1754" FT /db_xref="GOA:Q7W8Z1" FT /db_xref="InterPro:IPR004821" FT /db_xref="UniProtKB/TrEMBL:Q7W8Z1" FT /protein_id="CAE37285.1" FT /translation="MKPSLRIYRYPPPPSQRTPCALTIGNFDGVHLGHQAILARVRQEA FT RARGLVPAVMTFEPHPREYFATLNRRPELAPTRISGLRDKLQALAAAGIEQVAVERFDA FT RLAEMSANAFIEDLLVAGLQTRWLLVGEDFRYGHKRSGDIDLLREAGLAHGFEVCTLAD FT ITDRQGHRISSSEVRTALAVGDLDRAAQLLGQPFHISGHVIHGRKLGRELGFPTMNLRV FT APRCATRSGIYVVRVLGLQDRPLPAVASLGVRPTVEDRGRVLLEAHLLDESLDAYGKLV FT RVEFLHKLRDEEKFADLPSLTAAIAQDAQNARAYFAVHGL" FT misc_feature complement(29657..30034) FT /note="HMMPfam hit to PF01687, Riboflavin kinase / FAD FT synthetase, score 1.3e-44" FT CDS 30658..31320 FT /transl_table=11 FT /gene="purN" FT /locus_tag="BPP1986" FT /product="phosphoribosylglycinamide formyltransferase 1" FT /EC_number="2.1.2.2" FT /note="ortholog of Bordetella pertussis (BX470248) BP1755" FT /note="Similar to Escherichia coli FT phosphoribosylglycinamide formyltransferase 1 PurN FT SWALL:Q9F6I6 (EMBL:AF293163) (212 aa) fasta scores: E(): FT 1.2e-37, 55.55% id in 189 aa, and to Ralstonia solanacearum FT probable phosphoribosylglycinamide formyltransferase FT protein PurN or Rsc2454 or Rs01151 SWALL:Q8XWM0 FT (EMBL:AL646070) (216 aa) fasta scores: E(): 1.1e-46, 61.65% FT id in 206 aa" FT /db_xref="GOA:Q7W8Z0" FT /db_xref="HSSP:1GAR" FT /db_xref="InterPro:IPR004607" FT /db_xref="UniProtKB/TrEMBL:Q7W8Z0" FT /protein_id="CAE37286.1" FT /translation="MPQMSNPKRRLVILISGRGSNMQALVQACRGQSWPAEVAAVIASR FT PDAAGLDWARQQGIATAALYHKDYPSREAFDAALAREIDRHAPDYVLLAGFMRVLTPGF FT VNHYAGRLVNIHPSLLPAFPGLHTHAQALATGVRAHGCTVHFVTPVLDHGPIIAQGCVP FT VLAGDTPEALAGRVLEVEHQVYPAAARWLAEGRVSLTADQRVEVAGEPQRLFFWPAA" FT misc_feature 30682..31224 FT /note="HMMPfam hit to PF00551, Formyl transferase, score FT 3.4e-69" FT CDS 31508..32809 FT /transl_table=11 FT /locus_tag="BPP1987" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1756" FT /note="Similar to Methanopyrus kandleri AV19 tRNA/rRNA FT cytosine-C5-methylase Mk0295 SWALL:AAM01512 (EMBL:AE010327) FT (449 aa) fasta scores: E(): 3.4e-23, 30.24% id in 443 aa, FT and to Pyrococcus abyssi proliferating-cell nucleolar FT antigen P120, putative pab0830 SWALL:Q9UZ98 (EMBL:AJ248287) FT (449 aa) fasta scores: E(): 6.9e-28, 34.76% id in 302 aa" FT /db_xref="HSSP:1IXK" FT /db_xref="InterPro:IPR001678" FT /db_xref="UniProtKB/TrEMBL:Q7W8Y9" FT /protein_id="CAE37287.1" FT /translation="MLGEVLQWTYPADAVLSHWLRAHPGMGGRDRAELAQAVYDVLRHL FT RRYRQFAESGVGPATRRLAILGLAATMNPEVLAEGLGADEAAWLQRIRHIDVATLPRAV FT RASVPDWLDERLAQLDDSEALLDALNRPANLDIRVNPLKAERDPMLAVLRAGPAGRFDP FT QPMPYSPWGIRLAGHPSVNRWPQFEDGSIEVQDEGSQLLALLMGPRRGEMIIDFCAGAG FT GKTLLLGALMRSTGRLYAFDVSAARLARAKPRFARSGLSNVVPVAIDSENDTRVKRLAG FT KAQRVLVDAPCSGIGTLRRNPDLKWRQHPQSIAEMCELQHRILKSAARCVAPGGRLVYA FT TCSLLAEENAEQAERFLAEHPDFERLDAAQLLANRCANLTLSGPYVQLRPDVHGTDGFF FT AAVFERRKPSAAATQEPAVVAAETGPGEPEDAAG" FT misc_feature 31880..32719 FT /note="HMMPfam hit to PF01189, NOL1/NOP2/sun family, score FT 2.2e-44" FT CDS complement(32806..33180) FT /transl_table=11 FT /locus_tag="BPP1988" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1757" FT /db_xref="UniProtKB/TrEMBL:Q7W8Y8" FT /protein_id="CAE37288.1" FT /translation="MLRLLPALLALAVPAAWAAGPTVQVGDNVTLASYYQIRGADCAPL FT RPPLVRIVQPPRLGTATVVQSQGNSGPGGRCAHTAVPVTQIVYRGTQPGQDTVIWEVTH FT QPRQPASRRDSAAIMVVPRN" FT misc_feature complement(33127..33180) FT /note="Signal peptide predicted for BPP1988 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.997 between residues 18 and 19" FT CDS 33442..34650 FT /transl_table=11 FT /locus_tag="BPP1989" FT /product="probable fatty acid desaturase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1758" FT /db_xref="GOA:Q7W8Y7" FT /db_xref="InterPro:IPR005804" FT /db_xref="UniProtKB/TrEMBL:Q7W8Y7" FT /protein_id="CAE37289.1" FT /translation="MDSILSFISGGLTQATWWQIVLFTLVVTHITIVSVTVFLHRSQAH FT RGLDLHPAVMHFFRFWLWMTTGMVTKEWVAIHRKHHAKCEKEGDPHSPMLFGIWKVLFR FT GAELYREESANKETMAKFGHGTPDDWLERNIYSKHSLAGVLTMLAIDLALFGAVGLTVW FT AVQMAWIPFWAAGVVNGIGHYWGYRNYNSPDTSTNVFPWGIIIGGEELHNNHHAHGTSA FT KFSAKWYELDIGWGYISILKFFGLAKVKKVAPKLKLESGSKGIDLSTLQGVITHRYEVM FT ARYGDLVKRAAREELSKLKSSRQQDAANCRWTTLRRVRRWLHRNEEVLQPEQRAEVDQA FT IAQNQSLSTLVQMRRELGRLWESSSASSEQLLHDLQAWCQRAQQSGIAGLEQFALHLRR FT YAA" FT misc_feature join(33484..33552,33862..33930,33943..34002) FT /note="3 probable transmembrane helices predicted for FT BPP1989 by TMHMM2.0 at aa 15-37, 141-163 and 168-187" FT misc_feature 33490..34146 FT /note="HMMPfam hit to PF00487, Fatty acid desaturase, score FT 4.1e-05" FT CDS 34647..36947 FT /transl_table=11 FT /gene="uvrD" FT /gene_synonym="mutU" FT /gene_synonym="pdeB" FT /gene_synonym="rad" FT /gene_synonym="recL" FT /locus_tag="BPP1990" FT /product="DNA helicase II" FT /EC_number="3.6.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP1759" FT /db_xref="GOA:Q7W0T7" FT /db_xref="InterPro:IPR014016" FT /db_xref="UniProtKB/TrEMBL:Q7W0T7" FT /protein_id="CAE37290.1" FT /translation="MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQT FT GQASPFALLAVTFTNKAAREMLTRMSTLLPIDTRGLWIGTFHGLCNRMLRAHHRDAGLP FT QAFQILDTTDQLAAIKRLLKAGNIDDEKYPPRDVQRFINGAKEEGLRPGDVEAYDPHRR FT KLIEIYQLYEAQCQREGVVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNT FT LQYKWLRLLAGTGAAIFAVGDDDQSIYAFRGANVGNMADFERDYAHGRVIRLEQNYRSY FT GHILDSANALIGHNTGRLGKNLWTEQGEGEPVRVIEQPSDGMEAQWLVDEIRALINDGR FT MRSEIAVLYRSNAQSRVLEHALFSVGIPYKVYGGLRFFERQEIKHALAYLRLIANPNDD FT TSWMRVVNFPTRGIGARTLEQLSDAARAHDTSLFGAVARVGGKGGSNLAQFAQLIGQMA FT HDTRELPLPELVDHVIEASGLKAHYQTEREGAERLENLNELITAATVFAAEENFEGLPA FT GVVPDHDVSGALMPGVVDAPQPDTLGGLTPLAAFLSHAALEAGDNQAQVGQDAVQLMTV FT HAAKGLEFDAVFITGLEEGLFPHENSIMEPAGLEEERRLMYVAITRARERLYLSLAQSR FT MLHGQTRYAMRSRFLEEIPEQHLKWLSPRAGLHQGGGFGGAASAWSSRGDAFGRKPTGT FT AAPRQPRGMASGVTVGEQQFRVGQGVRHARFGDGTIIGLSGSGQDAQAQIQFRDVGAKT FT LALGIAKLDIITA" FT misc_feature 34662..36083 FT /note="HMMPfam hit to PF00580, UvrD/REP helicase, score FT 5.1e-198" FT misc_feature 34719..34742 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(37000..39612) FT /transl_table=11 FT /locus_tag="BPP1991" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1760" FT /db_xref="GOA:Q7W8Y6" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q7W8Y6" FT /protein_id="CAE37291.1" FT /translation="MSKPILKKRQRTTLAALLLCTAAATHAATQSPALAFDLPAQPLDA FT ALRAYARQAGVALSFDAREAARKQAPALRATMTAQAALQHLLRGSGLTWRAAGANRYAV FT VRAADAAAAWPLEPVRVYGDATRERVYTEQEIAATPASNRDLSALIATHPAIRESGTAE FT DGANRGTLNVEDISIHGASPYQNLFLIDGVGATSRVDPANKSRNFTDVPSNPQAYFLDT FT ALLGEVRVFDNSIPVEYGAFNGGVVDARLRRPSGENHVKLDYRWNGSNLTRQKIAPGNA FT EDWLQGTPDFTPSWRKRFHTASADIALGERAGLVLGLSRRISRIERWRLGAVGHLDRPE FT RDDSLDRVDNLLGKFSLRLDADTITDLSLKYADRREHLVSNFFRDTDWRNRHGAQGAVW FT NIEHTLRGGKLSAQLGWDRFDSHRNSAHTEFVQHDFVDGRPGFASGGYGKDEKGQRNLT FT LATRLDLAPIQTGPVSHASYVGLQVEHTGARFKRYNQSYSYRAVHREDGTEKHFSKVRH FT LPGSVTLDYTRLGLYASDELTWRRWTLNAGLRYDRDNFLHHRTLAPRARLDWDVLGSDD FT TVLSAGWSRYYGGHVLKIAMQEEFSRLSEQVLDHHGDPVPNGRKITRVNYDGLRSPYDD FT EWAFSLAQRAYGIRGVLTFVHRNGRDQVTRRGDSRVGYRYTNEGNSRTDGWNLTLANEE FT AWRLGETLWHAQASWGYQRNKRNLNLAEGYESSPVERADYVYYNGKRIPAANLPPSSFN FT LPHKVSLDLTGHWPRHGLTWSNTVNWHGRRKEIAFVDTGPAPEYLDMYESLSAPSYWSW FT DTRLIWQPPFARQVTLALDVLNVLNRIAALTTNPRDSLIDARRYRTGREIWLQVGYRY" FT misc_feature complement(39532..39612) FT /note="Signal peptide predicted for BPP1991 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.967 between residues 27 and 28" FT CDS complement(39973..41898) FT /transl_table=11 FT /locus_tag="BPP1992" FT /product="probable ABC transporter ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1761" FT /db_xref="GOA:Q7W8Y5" FT /db_xref="HSSP:1F2T" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8Y5" FT /protein_id="CAE37292.1" FT /translation="MIRASGLTLRRGTKVLLDGADFVVHPGERVGIVGKNGAGKSSLFA FT LLTGALDPDAGNLDLPAGWRIASVQQEIAADAQAAREFVIDGDTHLRALQAQRAALTDD FT QGTQIAETEAALIEAGAWSAASRAEQLLAGLGFKPSEWMQPVRSFSGGWRMRLALARAL FT MAPSELLLLDEPTNHLDLDAMLWLEKWLTAYPGTVLLISHDTEFLDAVARAILHFDQAK FT LQRYRGGYQDFLLQRAERLRQANIAYERQTREAARLQGFIDRFKAKASKAKQAQSRVKA FT LARMEALAPIHAESGIDIRIPSPDHMPDPLLAMEHMDAGYGGAEPILRDVTLMVRAGSR FT IGVLGANGAGKSTLIKTLADELAPHAGTRRASRGLAIGYFHQHQLDMLDLDSTPLAHLA FT RLAPEVREQELRNYLGGFGFSGDTVLSKVGPMSGGEKARLALSLIVWQKPNLLLLDEPS FT NHLDVETREALATALAEFSGSMLLVSHDRHLLRTTVDSFWIVADGGVREFDGDLEDYRD FT WLAARNAGERAAAREAAAGEPGVAIDRKAQRRLEAEQRQRLATLRKPLAAKLAKVEADM FT ERARARLQELDAVIADADLYSDARRTERQQVMTEHGESGKRLNDLEEQWLEIQQALEEI FT EQDNAA" FT misc_feature complement(40390..40887) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.1e-27" FT misc_feature complement(40564..40608) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(40843..40866) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(41236..41820) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.6e-39" FT misc_feature complement(41410..41454) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(41776..41799) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(41895..42791) FT /transl_table=11 FT /locus_tag="BPP1993" FT /product="putative adenine-specific methylase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1762" FT /db_xref="GOA:Q7W8Y4" FT /db_xref="InterPro:IPR017127" FT /db_xref="UniProtKB/TrEMBL:Q7W8Y4" FT /protein_id="CAE37293.1" FT /translation="MQNNNRQELQTLRDLIRYAVSRLNAARVALGHGSDNAWDEAVYLV FT LHGLHLPPDTLDPFLDARVLPSERSRVLDLIDRRVTERLPAAYLTGEAWLRGHRFHVDR FT RVIVPRSPIAELLDEGLAPWVRDPLQVERALDMCTGSGCLAILAALAFPVAQVDAVDVS FT SDALEVAARNVAEYGLQDRLTLRQGNLFEALPAAAYDVIVCNPPYVNQASMDALPQEYR FT HEPALALAGGADGMDLVRRILAAAPGYLSADGVLVLEIGHERDHFEAAFPDLQPVWLDT FT AESSDQILLLTREQLNT" FT misc_feature complement(42168..42188) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT CDS complement(42798..43937) FT /transl_table=11 FT /gene="dapE" FT /locus_tag="BPP1994" FT /product="succinyl-diaminopimelate desuccinylase" FT /EC_number="3.5.1.18" FT /note="ortholog of Bordetella pertussis (BX470248) BP1763" FT /db_xref="GOA:Q7W8Y3" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8Y3" FT /protein_id="CAE37294.1" FT /translation="MTASAVLDLVKDLIARPSVTPDDVDCQMLLAQRLERIGFQCETIA FT RGGVTNLWARRGAGAPLTVFAGHTDVVPPGPRDKWDSDPFVPTERDGFLYGRGAADMKS FT SIAAFVVAAEEFVAAHPEHPGSIALLITSDEEGPAVDGTVIVCDELRQRGEQLDYCIVG FT EPTSTEALGDVCKNGRRGSLSGRLLVKGVQGHVAYPHLARNPVHQLAPALTELVAIEWD FT QGNEYFPPTTFQVSNLHAGTGATNVVPGEAVALFNFRFSTASTPDQLKARVHEVLDRHG FT LEYQLDWELGGEPFLTPRGSLTDALVSAIQAETGLQAELSTTGGTSDGRFIARICPQVI FT EFGPCNATIHKVNERIELSSLAPLKNIYRRTLENLLLAD" FT misc_feature complement(42960..43910) FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40, score 3.2e-90" FT CDS complement(43937..44758) FT /transl_table=11 FT /gene="dapD" FT /locus_tag="BPP1995" FT /product="2,3,4,5-tetrahydropyridine-2-carboxylate FT N-succinyltransferase" FT /EC_number="2.3.1.117" FT /note="ortholog of Bordetella pertussis (BX470248) BP1764" FT /db_xref="GOA:Q7W8Y2" FT /db_xref="HSSP:1KGQ" FT /db_xref="InterPro:IPR001451" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8Y2" FT /protein_id="CAE37295.1" FT /translation="MTLDLQTTIEQAWENRANLSPVDASAEVRDAVEHTIDGLDLGRLR FT VAEKIDDQWIVHQWIKKAVLLSFRLHDNAVMGQGPLQFYDKVPTKFAGYGEAAFKAGGY FT RVVPPAVARRGAFIARNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGV FT GIGGVLEPLQANPTIIEDNCFIGARSEVVEGVVVEENSVLAMGVFLSQSTKIYDRATGK FT VSYGRVPSGSVVVPGSLPSEDGSHSLTCAVIVKRVDAQTRAKTSINDLLRA" FT misc_feature complement(44108..44161) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 2.6e+02" FT misc_feature complement(44162..44215) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 4" FT misc_feature complement(44258..44311) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 5.9" FT misc_feature complement(44270..44356) FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature." FT misc_feature complement(44312..44365) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats), score 1.7e+02" FT CDS complement(44784..45998) FT /transl_table=11 FT /gene="dapC" FT /locus_tag="BPP1996" FT /product="N-succinyl-L,L-diaminopimelate aminotransferase" FT /EC_number="2.6.1.17" FT /note="ortholog of Bordetella pertussis (BX470248) BP1765" FT /db_xref="GOA:Q7W8Y1" FT /db_xref="InterPro:IPR019878" FT /db_xref="UniProtKB/TrEMBL:Q7W8Y1" FT /protein_id="CAE37296.1" FT /translation="MLKSCPMNPRLDALHPYPFEKLRALLADAGKPTHDLPPINLSIGE FT PKHAAPACVGQAIAANLAGLSVYPSTKGEPALRQAISQWLSRRYSIPAPDPESEVLPVL FT GSREALFAFAQTVIDPSAGALVVCPNPFYQIYEGAALLAGATPYYVNADPARDFGCDWA FT RVPDEVWRRTQLVFVCSPGNPAGNVMSLEEWRTLFELSDRHGFVIAADECYSEIYLDED FT NPPLGSLQAARRLGRDRYTNLVAFSSLSKRSNVPGMRSGFVAGDAALLARFLLYRTYHG FT SAMSPVVSAASIAAWSDETHVQENRRQYRAKFEAVLPILQNVLDVRAPQASFYLWAGTP FT GSDTAFARELYGRTGVTVLPGSLLAREAHNANPGQGRIRIALVAPLDQCVQAAERIAHF FT ARTSI" FT misc_feature complement(44799..45752) FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 1.5e-13" FT tRNA 46026..46112 FT /note="tRNA Leu anticodon TAG, Cove score 68.96" FT CDS complement(46329..46658) FT /transl_table=11 FT /locus_tag="BPP1997" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1766" FT /db_xref="UniProtKB/TrEMBL:Q7W8Y0" FT /protein_id="CAE37297.1" FT /translation="MKTLATALMLSLGLLSAGAQAAPNAEPNNLPYQGVYGQTDANAPT FT RAQVQAELAQAKANGQYTFGELEYPAAQTGSTAAPSRDQVKAELAQAKASGQYTFGELD FT YPPRN" FT misc_feature complement(46596..46658) FT /note="Signal peptide predicted for BPP1997 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.996 between residues 21 and 22" FT CDS 47041..48288 FT /transl_table=11 FT /gene="phg" FT /locus_tag="BPP1998" FT /product="autotransporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1767" FT /db_xref="GOA:Q7W8X9" FT /db_xref="InterPro:IPR003991" FT /db_xref="UniProtKB/TrEMBL:Q7W8X9" FT /protein_id="CAE37298.1" FT /translation="MKPTSILARLPRYLGACALAALAVAPLAPAQAQTPLPAGLGAAEV FT RQYLSGLPSDALRQQASWLAPALLRPYLSGLTDAQLRQYVQALTPGQITQGLAALTPAQ FT RARLQREFERQARRQVQQAVRAEVAARSARAVAMGQSASMLLLDAEMGTLAQRQGDLRR FT GHDEGAFWARGSANRFKVDTPDTPAFDLRVEYLTLGADHGWRLDTGRLYLGAYAGVSRA FT RMDDNDIMHGRIESRFLGTYLTYVDNGGFYVDAVSKLGRIDESVSFDLPLELGDYDDDI FT SHTTYTGSVEAGYHFRLPQRWFVEPQAQVIYSRSSQTSVQGRAGVRAGRDFTLAGGATL FT RPYVSASYLHEFSHDDSVDFGGKSYDAELPGSRWQLGAGAALDVGAHRAYADLRYGHGA FT NISQDLSLNIGYAYRF" FT misc_feature 47041..47136 FT /note="Signal peptide predicted for BPP1998 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.976 between residues 32 and 33" FT misc_feature 47233..48282 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03212, Pertactin, score 5.2e-12" FT CDS 48363..48644 FT /transl_table=11 FT /locus_tag="BPP1999" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1768" FT /db_xref="UniProtKB/TrEMBL:Q7W8X8" FT /protein_id="CAE37299.1" FT /translation="MVYEDFFWFMAALVALALVGGALFGRLGRLAHSVIAMLGLAIAVG FT VAVLLGARGEDVGPYAPLLAIAAFMFCLMIGGAATLVTRRVRRRHLTH" FT misc_feature 48363..48455 FT /note="Signal peptide predicted for BPP1999 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.626) with cleavage site FT probability 0.236 between residues 31 and 32" FT misc_feature join(48378..48446,48459..48512,48540..48608) FT /note="3 probable transmembrane helices predicted for FT BPP1999 by TMHMM2.0 at aa 6-28, 33-50 and 60-82" FT CDS 48686..49006 FT /transl_table=11 FT /locus_tag="BPP2000" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1769" FT /db_xref="UniProtKB/TrEMBL:Q7W8X7" FT /protein_id="CAE37300.1" FT /translation="MDISSHLLAELANGVCLETRVDGQTIGTYVVLGPADLDAIADIVP FT RQRVEEGADIHAAAVDSVDGAQMEIDQVIENMNPGDVAVFFCADGDCYGAALDLLGLPV FT DE" FT CDS 49271..49516 FT /transl_table=11 FT /gene="cspA" FT /locus_tag="BPP2001" FT /product="cold shock-like protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1770" FT /db_xref="GOA:P0A354" FT /db_xref="HSSP:1MJC" FT /db_xref="InterPro:IPR012340" FT /db_xref="UniProtKB/Swiss-Prot:P0A354" FT /protein_id="CAE37301.1" FT /translation="MVPGLGPLISRKYSMETGVVKWFNAEKGYGFITPEAGGKDLFAHF FT SEIQANGFKSLEENQRVSFVTAMGPKGPQATKIQIL" FT misc_feature 49313..49510 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00313, 'Cold-shock' DNA-binding FT domain, score 8.4e-37" FT misc_feature 49355..49414 FT /note="PS00352 'Cold-shock' DNA-binding domain signature." FT CDS 49600..50166 FT /transl_table=11 FT /locus_tag="BPP2002" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1771" FT /db_xref="InterPro:IPR010323" FT /db_xref="UniProtKB/TrEMBL:Q7W8X6" FT /protein_id="CAE37302.1" FT /translation="MSDSMAGPAALPDAATVLAFWREAGPARWYAKDEQFDRTFTMRFE FT AAHMAAARGELMAWSASAEGVLALLILLDQFPRNAYRGTGHMFATDGLARQICEQAIAA FT GLDRQGPEDLRQFYYMPLEHAEDLAAQEQCVSLMAPLHAETLRWAEIHRDIIARFGRFP FT HRNTVLGRATTVEEQQFLDQGGFSG" FT CDS 50512..50718 FT /transl_table=11 FT /gene="cspA" FT /locus_tag="BPP2003" FT /product="cold shock-like protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1772" FT /db_xref="GOA:Q7W8X5" FT /db_xref="HSSP:1HZC" FT /db_xref="InterPro:IPR019844" FT /db_xref="UniProtKB/TrEMBL:Q7W8X5" FT /protein_id="CAE37303.1" FT /translation="MATGIVKWFNAEKGYGFIMPDDGSKDLFAHYSEIRSEGYKSLQEN FT QRVSFEVGQGPKGPSAKNIKVIA" FT misc_feature 50512..50712 FT /note="HMMPfam hit to PF00313, 'Cold-shock' DNA-binding FT domain, score 2.2e-39" FT misc_feature 50554..50613 FT /note="PS00352 'Cold-shock' DNA-binding domain signature." FT CDS complement(50816..51394) FT /transl_table=11 FT /locus_tag="BPP2004" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1773" FT /db_xref="GOA:Q7W8X4" FT /db_xref="InterPro:IPR005134" FT /db_xref="UniProtKB/TrEMBL:Q7W8X4" FT /protein_id="CAE37304.1" FT /translation="MARKPPMHPIQEPRLGPLPALIFSSRWLQLPLYLGLIVAQGVYVL FT LFLKELWHLVTHTLSFGEQEIMLIVLGLIDVVMISNLLVMVIVGGYETFVSRLRLEGHP FT DQPEWLSHVNASVLKVKLAMAIIGISSIHLLRTFIEASNLGSPNSRFTETGVMWQTIIH FT VVFILSAIGIAYVDRLTSQSVGHGAHPSH" FT misc_feature complement(50843..51364) FT /note="HMMPfam hit to PF03350, Uncharacterized protein FT family, UPF0114, score 5.4e-73" FT misc_feature complement(join(50867..50932,50978..51028,51128..51193, FT 51239..51304)) FT /note="4 probable transmembrane helices predicted for FT BPP2004 by TMHMM2.0 at aa 30-52, 67-89, 122-139 and FT 154-176" FT CDS 51573..52883 FT /transl_table=11 FT /gene="tig" FT /locus_tag="BPP2005" FT /product="trigger factor" FT /note="ortholog of Bordetella pertussis (BX470248) BP1774" FT /db_xref="GOA:Q7W8X3" FT /db_xref="InterPro:IPR008881" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8X3" FT /protein_id="CAE37305.1" FT /translation="MQPVVETLSGLERRVDLAVSVAEVEKEVQAQLKRVGRTAKVAGFR FT PGKAPLAMLERSHGPGIRYDVINSLVGRAFEQAVDGAKLRVAGSPTLTPKTEGVADDTL FT AFTATFEVYPEVTVPDLSALAVTRYDTPVTDAEVNQTLDVLRKQRAKFETREGRASQDG FT DRVVLDFAGTIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAALGLKAGESKVFPLKFPDD FT YQGKEVAGKTAEFTVTVKEVAEGVLPEVDAEFAKSLGQAEGDVEKLKADIRTNIEREVK FT ARLQGRTKGSVMDALVEAGKFDVPKALVDSDVEGRIAAAREELKQRGVPNADSVPMPAE FT VFSTESERRVRLGLLVSELVKQAQLQAKPEQVRARIEEFAQNYEQPAQVVSYYLADRQR FT RAEIEAIVLEDNVVAHVLENAKVADEKVPFDQLMGMA" FT misc_feature 52245..52268 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 52886..53539 FT /transl_table=11 FT /gene="clpP" FT /gene_synonym="lopP" FT /locus_tag="BPP2006" FT /product="ATP-dependent Clp protease proteolytic subunit" FT /EC_number="3.4.21.92" FT /note="ortholog of Bordetella pertussis (BX470248) BP1775" FT /db_xref="GOA:Q7W8X2" FT /db_xref="InterPro:IPR018215" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8X2" FT /protein_id="CAE37306.1" FT /translation="MQRFTDFYAAMHGGSSVTPTGLGYIPMVIEQSGRGERAYDIYSRL FT LRERLIFLVGPVNDNTANLVVAQLLFLESENPDKDISFYINSPGGSVYAGMAIYDTMQF FT IKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQARE FT ILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVLTSRAQT" FT misc_feature 52982..53527 FT /note="HMMPfam hit to PF00574, Clp protease, score FT 1.6e-125" FT misc_feature 53282..53323 FT /note="PS00382 Endopeptidase Clp histidine active site." FT CDS 53587..54948 FT /transl_table=11 FT /gene="clpX" FT /gene_synonym="lopC" FT /locus_tag="BPP2007" FT /product="ATP-dependent Clp protease ATP-binding subunit" FT /note="ortholog of Bordetella pertussis (BX470248) BP1776" FT /db_xref="GOA:Q7W8X1" FT /db_xref="InterPro:IPR010603" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8X1" FT /protein_id="CAE37307.1" FT /translation="MIAPALIRLARLHQRYETLMPEKKGSADAKVLHCSFCNKSQHEVR FT KLIAGPSVFICDECIDLCNDIIREEAQATARAAIRSELPTPAEIKTFLDQYVIGQTSPK FT RMLAVAVYNHYKRIRHGEIKGDEVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMA FT DATTLTEAGYVGEDVENIIQKLLQNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDV FT SGEGVQQALLKLIEGTVASVPPQGGRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDR FT TEKSGIGFSAAVRAKSERGVGELFSEAEPEDLIKFGLIPELVGRLPVVATLDELDEAAL FT VQILTEPKNALVKQFQKLFAMEGAELDVRPDALKAISRKALKRKTGARGLRSILEGALL FT DTMYDLPSQGNVSRVVLEANAVEGDGKPLLIYADESEAASGEKAGRGEVRDAAA" FT misc_feature 53986..54609 FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA), score 2.1e-23" FT misc_feature 54001..54024 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 55092..57590 FT /transl_table=11 FT /gene="lon" FT /gene_synonym="capR" FT /gene_synonym="deg" FT /gene_synonym="muc" FT /gene_synonym="lopA" FT /locus_tag="BPP2008" FT /product="ATP-dependent protease La" FT /EC_number="3.4.21.53" FT /note="ortholog of Bordetella pertussis (BX470248) BP1777" FT /db_xref="GOA:Q7W0T6" FT /db_xref="HSSP:1RR9" FT /db_xref="InterPro:IPR003959" FT /db_xref="UniProtKB/TrEMBL:Q7W0T6" FT /protein_id="CAE37308.1" FT /translation="MPRPPLRRVIPRNPPMSASQTLSSDPIDLPLLPLRDVVVFPHMVI FT PLFVGRPRSIRALEVAMEAGKSIMLVAQKSAGKDDPTPEDVYEIGCVASILQMLKLPDG FT TVKVLVEGTQRARIDSIEDVDSHFTCQVTPIEPDTLQGSETEALRRAIVAQFEQYVKLN FT KKIPPEILTSLAGIDDAGRLADTIAAHLPLKLEQKQKMLEVVVTAERLEGLLTQLETEI FT DILQVEKRIRGRVKKQMEKSQRDYYLNEQVKAIQKELGEGEEGADIEELEKKIIAAHMP FT KEARKKADGELKKLKLMSPMSAEATVVRNYIDTLINLPWKRKSKINNSIGNAERVLDDD FT HYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIAKATNRKFVRMAL FT GGVRDEAEIRGHRRTYIGSMPGKILQNMSKVGVRNPLFLLDEIDKLGMDFRGDPSSALL FT EVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNTLNIPPALLDRMEVIRLSGYTEEEKIH FT IARDHLLPKLMKNNGVKDNELTVDDSALRDIVRYYTREAGVRALEREVGKICRKVVKQL FT LIKSDEAKAAGNKTAEAQTVLVNGDNLNDFLGVRRYTFGMAEKENQIGQVTGLAWTEVG FT GDLLTIEVADMPGKGNIQRTGSLGDVMKESVEAARTVVRSRARRLGFADSVFEKHDMHV FT HVPEGATPKDGPSAGIAITTAMVSALSRIPVRADVAMTGEITLRGEVLPIGGLKEKLLA FT AHRGGIKTVLIPEENVKDLAEIPDNVKNFLEIVPVRWIDKVLELALERMPEPLSEEEAV FT KEAIVAKPAEAGAADPVMKH" FT misc_feature 55173..55751 FT /note="HMMPfam hit to PF02190, ATP-dependent protease La FT (LON) domain, score 1.3e-47" FT misc_feature 56193..56777 FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA), score 2e-46" FT misc_feature 56208..56231 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 57201..57227 FT /note="PS01046 ATP-dependent serine proteases, lon family, FT serine active site." FT CDS complement(57722..58672) FT /transl_table=11 FT /locus_tag="BPP2009" FT /product="probable LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1778" FT /db_xref="GOA:Q7W8X0" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8X0" FT /protein_id="CAE37309.1" FT /translation="MTDPTIPAGAGDAPADPMLDLRRVRQFVTLGETLNFRRAADRLHM FT TQPPLTVAIQKLEAELGTRLFERGGSGGVSLTPGGHAALAEARRLLFHNAQLLAAARAA FT SSGTGGALKVGFVGSTTNGVLQRIVRLFRAEYPGVELVLKEGTSVRIAERVDSGDLDVG FT LVRTPLLTPSRARLAPLLAEDFVAALPLGNPLAQKADIRMEELATESFVFYSREDAAGL FT HATAMLACQRAGFLPRVTQEATQVQTVLSLVESGLGVALVPAVMQYNPSPRVAYRAIAD FT VSPAAEIGLALLLPEPSSAAAQRFREVALHCFGDD" FT misc_feature complement(57731..58360) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.3e-43" FT misc_feature complement(58430..58612) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1.8e-19" FT misc_feature complement(58478..58570) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 58900..60123 FT /transl_table=11 FT /locus_tag="BPP2010" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1779" FT /db_xref="GOA:Q7W8W9" FT /db_xref="HSSP:1PQY" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7W8W9" FT /protein_id="CAE37310.1" FT /translation="MDTALGHIKVLDLTRILAGPWATQTLADMGAEVVKVERPRVGDDT FT RAWGPPFLKDSEGNETADSSYFLAANRGKKSITVDLAHPDGQALIRDLAATADVVVENY FT KVGTLARYGLDYESLKAINPRLVYCSITGFGQDGPYASLPGYDFVFQGMGGLMSITGQP FT EGTPGDEPMKVGIAISDLLTGMYATTAILAALERRHVSGTGQHVDMSLLDCVVSISSYQ FT AINHFLSGKIPRRMGNAHSNMVPYQVFRCKEGDVIVAVGNDGQYRALCKLIERDDLATD FT ERYATPGQRNRNCDTLIPEIAQAMLARTMQEWGALMEAANVPCGPIYNMQQMFEDPHVQ FT HRGMRLSLPHSAGVQAPAVASPIRLSDTPIQYGRSAPLLGEHTDSVLAQWLGLAPARIA FT ELRARGAI" FT misc_feature 59128..59709 FT /note="HMMPfam hit to PF02515, CAIB/BAIF family, score FT 3.3e-87" FT CDS 60189..61160 FT /transl_table=11 FT /locus_tag="BPP2011" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1780" FT /db_xref="GOA:Q7W8W8" FT /db_xref="InterPro:IPR002155" FT /db_xref="UniProtKB/TrEMBL:Q7W8W8" FT /protein_id="CAE37311.1" FT /translation="MLRHTFIRAALAAALAVCAAGAHAQAKPSSIRLVVPYPAGGAADQ FT IARLVANDAGAILGTPIVIENKGGAGGMIAAESVLQAAPDGATFFVGSNAPIVINQAIY FT EKMSYDPAKDFVPVAGMGKAPLLLVTRKDLGTADVKALAELGKREAGKLTMGSASSGNI FT THLAGEYAASQMGFKVTHVPFKGSAPAITSLMGGNIDIMFDALPSCMAQAESGRIVPLA FT ILDDQRFPQLRDVPTAKELGYPGLEAAVWFGVMARAGTPDSSIGAMNKAINQALQKQEL FT IDKLRRIGAQPMPGSQQDFARFIDAERKQWVPLAKSLGVRAD" FT misc_feature 60189..60260 FT /note="Signal peptide predicted for BPP2011 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.878 between residues 24 and 25" FT misc_feature 60225..60266 FT /note="PS00099 Thiolases active site." FT misc_feature 60324..61148 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 4.9e-86" FT CDS 61165..61629 FT /transl_table=11 FT /locus_tag="BPP2012" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1781" FT /db_xref="GOA:Q7W8W7" FT /db_xref="InterPro:IPR002539" FT /db_xref="UniProtKB/TrEMBL:Q7W8W7" FT /protein_id="CAE37312.1" FT /translation="MKKNSFDSIAALKAFAGQPAAVGQPIVVDQSAIDTFGDVVHDRQW FT IHVDPVRAAAESPFGTTIAHGLLTLSLITGWYHQLFEFPGRKLALNYGFDKVRFPAPVP FT SGSALVGSFRLARVDDLGPDEARCLWEVDVRVAGAERPAMVAEWLMQLRY" FT misc_feature 61165..61233 FT /note="Signal peptide predicted for BPP2012 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.841) with cleavage site FT probability 0.412 between residues 23 and 24" FT misc_feature 61201..61566 FT /note="HMMPfam hit to PF01575, MaoC like domain, score FT 7.6e-18" FT CDS 61643..62446 FT /transl_table=11 FT /locus_tag="BPP2013" FT /product="probable enoyl-CoA hydratase/isomerase" FT /EC_number="4.2.1.17" FT /note="ortholog of Bordetella pertussis (BX470248) BP1782" FT /db_xref="GOA:Q7W8W6" FT /db_xref="HSSP:1HZD" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q7W8W6" FT /protein_id="CAE37313.1" FT /translation="MIMSVLETSRVGACAVLTLNRPAARNALDMDLRNALAKALPEIRD FT DATVRAVVLTGAGGHFCAGGDIRAIAAGQGNADVFEGRNRILSMQRWFDDLVDLEKPVI FT AAVDGVAFGAGLSLALAADFVLASPRATFCAVFARLGYVPDLGGMYLLPRAVGLARAKA FT LAFSARVVGAPEALEMGIAHQLVDDRPVLDAALELAGRFEQAPAGALGIVKSVMNHAFE FT SDRRTVYMQEALAQALCRESAFHQEAARRFLDKQAPLYQWPQEQQ" FT misc_feature 61685..62203 FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family, score 9.5e-46" FT misc_feature 61952..62014 FT /note="PS00166 Enoyl-CoA hydratase/isomerase signature." FT CDS 62443..62874 FT /transl_table=11 FT /locus_tag="BPP2014" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1783" FT /db_xref="InterPro:IPR002878" FT /db_xref="UniProtKB/TrEMBL:Q7W8W5" FT /protein_id="CAE37314.1" FT /translation="MTEHPQAASALLPQQEYFAHLADGRFMIQRSRSSGEYVFYPRVAA FT PRTGAQDLEWVAASGRGTVYATTVMRVRPPAAPYNVCLVELEEGPRMMSRVEGIGPEDV FT QVGMAVRARIIRDDAGEPLVVFEPAGPSDAGIGQGRAAQ" FT misc_feature 62479..62817 FT /note="HMMPfam hit to PF01796, Domain of unknown function FT DUF35, score 3.2e-15" FT CDS 62871..64028 FT /transl_table=11 FT /locus_tag="BPP2015" FT /product="putative thiolase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1784" FT /db_xref="GOA:Q7W8W4" FT /db_xref="InterPro:IPR002155" FT /db_xref="UniProtKB/TrEMBL:Q7W8W4" FT /protein_id="CAE37315.1" FT /translation="MIQERFPRGKTAIVACATYGIGESPGLSSLDLAVRASVQALDSVG FT LTPADVDGLFIGLPDDFVSGLSFTEYLGISPRLTDNNRTGGSSFLTHAIHAALALEAGL FT CDVALIAYGSNQRSGAGKLVSSMRPSLYEGAYKLARPVGAYALAASRYAAQYGLKKEQL FT GAVALAARQWAQKNPEAYMRAPLTMDEYLASRLVCDPFSVRDCCLVTDGAAAVVMVRAD FT RARDLAARPAYLLGGAAAAWHKDITNMPDLTVTAASLSGPRAMAQAGVTPADIDVLELY FT DAFTLNTILFLEDLGFCAKGEGGAFVEDGRIAPGGALPVNTNGGGLSCVHPGMYGLFTM FT VEAAQQLAGAAGERQVAQARLALAHGNGGELSSQATLILGTEETI" FT misc_feature 63573..64001 FT /note="HMMPfam hit to PF02803, Thiolase, C-terminal domain, FT score 0.00049" FT CDS 64035..64826 FT /transl_table=11 FT /gene="fabG" FT /locus_tag="BPP2016" FT /product="3-oxoacyl-[acyl-carrier protein] reductase" FT /EC_number="1.1.1.100" FT /note="ortholog of Bordetella pertussis (BX470248) BP1785" FT /db_xref="GOA:Q7W8W3" FT /db_xref="HSSP:1GZ6" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W8W3" FT /protein_id="CAE37316.1" FT /translation="MKETAMQDKLLTLENRQVIVTGAGQGIGRALASAIAELGGRVVAV FT DLNADALAALREALGHERCVTVAGNVADPSLAQQAVDAGVTAFGGVNGLVNNAGVTRTA FT MIDKMSISDWQQVIDVHLSGSFYFLQALGRHLLGRAKAGGDGAGAIVNISSDAGRRGTI FT GQINYGAAKAGVLGLTMCAAREWARYGIRTNTVGFGVVETPMTETIRGEKFRDTYLSQI FT PLGRWGEADEVVRPVCFLLSDAASYVTGQHLSVNGGYTIGL" FT misc_feature 64074..64811 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 8.9e-76" FT misc_feature 64497..64583 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 64823..65986 FT /transl_table=11 FT /locus_tag="BPP2017" FT /product="putative acyl-CoA dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1786" FT /db_xref="GOA:Q7W8W2" FT /db_xref="InterPro:IPR006092" FT /db_xref="UniProtKB/TrEMBL:Q7W8W2" FT /protein_id="CAE37317.1" FT /translation="MIVSALIDRFELAELPARAQAFRQDVQAFLKAELPPLPADRRARS FT WMGFDAGFSRKLAARGWVGVTLPRAYGGAEMDAFSRFVLIEELLCAGAPVSAHWIADRQ FT SGPQIRKFGSEAQRSFYLPRICRGEAFFCIGMSEPNSGSDLASVGTRATRRADGGWTLS FT GRKIWTTNAQHCHYMIALVRTSGTPQDRNQGLSQFIVDLSLPGVTVRPISDLAGDAHFS FT EVFFDDVQLSDEALIGQEGSGWEQVTAELAFERSGPERIYSSMVLLDGWIQWLRGRGDV FT SQTAAVGRYATHLAALRNLSLSVTARLAAGESPVVEAALVKELGTTFEQEIPAAIEAAL FT GSDPGADIDAELLRTCAYVNQVCPTYSLRGGTREILRGMIARGLGLR" FT misc_feature 64865..65221 FT /note="HMMPfam hit to PF02771, Acyl-CoA dehydrogenase, FT N-terminal domain, score 0.00034" FT misc_feature 65225..65263 FT /note="PS00072 Acyl-CoA dehydrogenases signature 1." FT misc_feature 65225..65533 FT /note="HMMPfam hit to PF02770, Acyl-CoA dehydrogenase, FT middle domain, score 3.4e-13" FT CDS join(66008..66643,66645..67004) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2018" FT /product="putative acyl-CoA dehydrogenase (Pseudogene)" FT /note="ortholog of Bordetella pertussis (BX470248) BP1787" FT /db_xref="PSEUDO:CAE37318.1" FT misc_feature join(66524..66643,66645..66962) FT /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase, FT C-terminal domain, score 9.1e-17" FT CDS 67001..67717 FT /transl_table=11 FT /gene="pcaI" FT /locus_tag="BPP2019" FT /product="3-oxoadipate CoA-transferase subunit A" FT /EC_number="2.8.3.6" FT /note="ortholog of Bordetella pertussis (BX470248) BP1788" FT /db_xref="GOA:Q7W8W1" FT /db_xref="HSSP:1K6D" FT /db_xref="InterPro:IPR004165" FT /db_xref="UniProtKB/TrEMBL:Q7W8W1" FT /protein_id="CAE37319.1" FT /translation="MTAGTSTHFNQVNGVGMLNKTCESADEAVSVVESGATILISGFGD FT IGLPFELLHALARTSVKDLTIVSNNAGTGELGLSRLFRNRQVSRLIASFPSQPDSHHYF FT AAYQEGLVDLELVPQGTLAERIRAAGAGLAGFFTPTGYGTELAQGKECRMFKGKGYVFE FT EALPGDFAFIKAHVADAYGNLRYRRASRTFNPIMAMAARTTIAEAKQMVPVGSIDPDDV FT HTPGVFVDRIVEVRDE" FT misc_feature 67061..67711 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF01144, Coenzyme A transferase, FT score 1.4e-88" FT CDS 67710..68351 FT /transl_table=11 FT /gene="pcaJ" FT /locus_tag="BPP2020" FT /product="3-oxoadipate CoA-transferase subunit B" FT /EC_number="2.8.3.6" FT /note="ortholog of Bordetella pertussis (BX470248) BP1789" FT /db_xref="GOA:Q7W8W0" FT /db_xref="InterPro:IPR004164" FT /db_xref="UniProtKB/TrEMBL:Q7W8W0" FT /protein_id="CAE37320.1" FT /translation="MSKGWSNDEIAARIAVDLPEHAIVNLGIGLPILVANHIPEDKTIF FT FHSENGIIGLGPVPAPGQEDPDIVNAAKKHATLIAGASIVHHADSFSLIRGGRLDYSVL FT GGLQVFSGGDIANWKVPGQKGGGGVGGAMDLAVGARNVLVMMRHQDKTGASKLVKSCTF FT PLTAVSAVTRVYTELGIFECAGDAFIVRESAPGIGKDELLRKTEAALTFP" FT misc_feature 67725..68327 FT /note="HMMPfam hit to PF01144, Coenzyme A transferase, FT score 1.2e-37" FT misc_feature 67845..67871 FT /note="PS01274 CoA transferases signature 2." FT CDS 68386..69348 FT /transl_table=11 FT /locus_tag="BPP2021" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1790" FT /db_xref="GOA:Q7W8V9" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W8V9" FT /protein_id="CAE37321.1" FT /translation="MKTKIKIVTLALCAFSSAVFASSFPSKPINLIVPYPPGGAVDPIA FT RLYAEKISQSWGVPVIVLNRPGAGTTIGLNQAARAEPDGYTVVLGTASITSNAPLYRSL FT PYDTLKDFTYLSMAGMIPLAITANPRTAVDSMDELVGQLKKKPGSLTYSSSGNGTIIHL FT GGELFKSLAGVDMVHVPYKGSGPSVMAGVAGEVDLTFDSVFLMDPQVKAGKLKYIAVAS FT EKRLKSLPEVPAIGEKYPGYFVTSWVGFMGPAGISADITAAWAKEIARVAALPDVSDKL FT ATLGVESVSSTPQQFSAFVESEIRKWEKVVQDAHIPPVQ" FT misc_feature 68386..68448 FT /note="Signal peptide predicted for BPP2021 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.998 between residues 21 and 22" FT misc_feature 68404..68457 FT /note="1 probable transmembrane helix predicted for BPP2021 FT by TMHMM2.0 at aa 7-24" FT misc_feature 68515..69333 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 3.5e-83" FT CDS 69690..71306 FT /transl_table=11 FT /locus_tag="BPP2022" FT /product="autotransporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1793" FT /db_xref="GOA:Q7W8V8" FT /db_xref="InterPro:IPR003991" FT /db_xref="UniProtKB/TrEMBL:Q7W8V8" FT /protein_id="CAE37322.1" FT /translation="MALARRRLAWPGVCGALSLAAWLALAQAQDAMAAPGPKGVPAVSA FT PMLDGRPVDDENGWTTIALDGTAIDDTWTEIDLSDDALHGGTDGENSIGLPPPGLDGTP FT IGEEWIEIPPPDLDGESLDDDHTHVDTPQPELDGAPADGEDGGLPSPPAEAPQAGPDAS FT KPQPEGPPEPDGNPQPDVEPGPEVEPGPEVEPGPQEQPRPQPDARPQDEPHAQPLPPAG FT SPGDGIYMPRSGILTAPVLAVLGTASAPQGIWQAEMNALSKRMGELRLTPAAGGVWARS FT FAQRQRLDNQVVDRFTQTVGGIEIGADTALPAAEGRWHVGAVAGYSRARRKLAYSARGN FT SDSLHVGAYATYIGDGGFYLDGIVRVNRYEHDFKADGQRGARVTGKYRANGIGLSLETG FT RRFTWAGDWFVEPQVEVALFRSGKADYTASNGVRVDVASTKSLLGRLGLQVGRKLDLGN FT GKLVQPYAKLSWLQEFDGVGKVRTNDIGHDVKLRGGRAELDLGVAAALGKHSSLFASYE FT YSKGSRLTIPWSFHVGYRYAW" FT misc_feature 69999..71300 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF03212, Pertactin, score 1e-157" FT misc_feature 70803..70829 FT /note="PS00697 ATP-dependent DNA ligase AMP-binding site." FT CDS complement(71691..72419) FT /transl_table=11 FT /gene="lexA" FT /gene_synonym="exra" FT /gene_synonym="spr" FT /gene_synonym="tsl" FT /gene_synonym="umuA" FT /locus_tag="BPP2023" FT /product="LexA repressor" FT /EC_number="3.4.21.88" FT /note="ortholog of Bordetella pertussis (BX470248) BP1794" FT /db_xref="GOA:Q7W0T5" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q7W0T5" FT /protein_id="CAE37323.1" FT /translation="MRLAFFPWVLQNGAVYPYSPQKRVITMATKLTERQQEILDLIRQT FT VARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDNAAPS FT AQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFTQTPDYLLKVRGMSMRD FT AGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFSPIVVAN FT TDDFALEGIAVGLIRTQPLH" FT misc_feature complement(71748..72074) FT /note="HMMPfam hit to PF00717, Peptidase family S24, score FT 5.5e-46" FT misc_feature complement(72144..72338) FT /note="HMMPfam hit to PF01726, LexA DNA binding domain, FT score 6.4e-35" FT CDS complement(72470..73672) FT /transl_table=11 FT /gene="tyrB" FT /gene_synonym="aspC" FT /locus_tag="BPP2024" FT /product="aromatic-amino-acid aminotransferase" FT /EC_number="2.6.1.57" FT /note="ortholog of Bordetella pertussis (BX470248) BP1795" FT /db_xref="GOA:Q7W8V7" FT /db_xref="HSSP:1ART" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/TrEMBL:Q7W8V7" FT /protein_id="CAE37324.1" FT /translation="MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGR FT IPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNEGAQALLLGADSPLAAEGRVLTAQAL FT GGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFE FT AMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGE FT GLEQDAAVVRMFAALDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRV FT IRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKAQGVAQD FT FSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVL FT K" FT misc_feature complement(72476..73426) FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 1.2e-96" FT misc_feature complement(72896..72937) FT /note="PS00105 Aminotransferases class-I FT pyridoxal-phosphate attachment site." FT CDS 73751..75778 FT /transl_table=11 FT /gene="uvrB" FT /locus_tag="BPP2025" FT /product="excinuclease ABC subunit B" FT /note="ortholog of Bordetella pertussis (BX470248) BP1796" FT /db_xref="GOA:Q7W8V6" FT /db_xref="HSSP:1D9X" FT /db_xref="InterPro:IPR004807" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8V6" FT /protein_id="CAE37325.1" FT /translation="MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQT FT LLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDY FT YQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDY FT HAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRGETIDIFPAESPELALR FT LTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLA FT QLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPA FT DALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCV FT FVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVL FT VTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGISLLREG FT LDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDET FT ERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMARE FT IRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVG" FT misc_feature 73892..73915 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 75182..75412 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 4.6e-17" FT misc_feature 75647..75754 FT /note="HMMPfam hit to PF02151, UvrB/uvrC motif, score FT 1.2e-08" FT CDS 76004..76531 FT /transl_table=11 FT /gene="ptpA" FT /locus_tag="BPP2026" FT /product="low molecular weight FT protein-tyrosine-phosphatase" FT /EC_number="3.1.3.48" FT /note="ortholog of Bordetella pertussis (BX470248) BP1797" FT /db_xref="GOA:Q7W8V5" FT /db_xref="HSSP:1DG9" FT /db_xref="InterPro:IPR017867" FT /db_xref="UniProtKB/TrEMBL:Q7W8V5" FT /protein_id="CAE37326.1" FT /translation="MLYSGFSRTLTPMMTKVLFVCMGNICRSPSAEGVFRHLVNDAGMG FT DVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCEARQVTADDFREFDLILAMDWD FT NLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEDFGKVLDYLEDACQGVLE FT LVRKRATQYQAA" FT misc_feature 76046..76495 FT /note="HMMPfam hit to PF01451, Low molecular weight FT phosphotyrosine protein phosphatase, score 1.4e-45" FT CDS 76747..77259 FT /transl_table=11 FT /locus_tag="BPP2027" FT /product="putative DNA-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1798" FT /db_xref="GOA:Q7W8V4" FT /db_xref="InterPro:IPR010242" FT /db_xref="UniProtKB/TrEMBL:Q7W8V4" FT /protein_id="CAE37327.1" FT /translation="MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQL FT FGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDG FT KPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTP FT VAANATA" FT misc_feature 76747..76833 FT /note="Signal peptide predicted for BPP2027 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.866) with cleavage site FT probability 0.553 between residues 42 and 43" FT misc_feature 76747..77124 FT /note="HMMPfam hit to PF02082, Uncharacterized protein FT family UPF0074, score 1.8e-52" FT CDS 77277..78488 FT /transl_table=11 FT /gene="iscS" FT /locus_tag="BPP2028" FT /product="cysteine desulfurase" FT /EC_number="4.4.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP1799" FT /db_xref="GOA:Q7W8V3" FT /db_xref="HSSP:1EG5" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q7W8V3" FT /protein_id="CAE37328.1" FT /translation="MSNRPIYLDYSATTPVDPRVVEKMIPWLYESFGNPASRSHAFGWE FT AEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHK FT AVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIA FT ALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPR FT VRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLT FT QIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRA FT LGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQ FT WAAH" FT misc_feature 77322..78380 FT /note="HMMPfam hit to PF00266, Aminotransferase class-V, FT score 7.4e-116" FT misc_feature 77862..77921 FT /note="PS00595 Aminotransferases class-V FT pyridoxal-phosphate attachment site." FT CDS 78522..78932 FT /transl_table=11 FT /gene="iscU" FT /gene_synonym="nifU" FT /locus_tag="BPP2029" FT /product="[Fe-S] cluster formation/repair protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1800" FT /db_xref="GOA:Q7W8V2" FT /db_xref="HSSP:1Q48" FT /db_xref="InterPro:IPR002871" FT /db_xref="UniProtKB/TrEMBL:Q7W8V2" FT /protein_id="CAE37329.1" FT /translation="MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQI FT KVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKI FT HCSILAEDAIKAAVQDYKTKHGAETPEAVAAN" FT misc_feature 78525..78905 FT /note="HMMPfam hit to PF01592, NifU-like N terminal domain, FT score 1.3e-79" FT CDS 78934..79257 FT /transl_table=11 FT /gene="iscA" FT /locus_tag="BPP2030" FT /product="[Fe-S] cluster formation/repair protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1801" FT /db_xref="GOA:Q7W8V1" FT /db_xref="HSSP:1R94" FT /db_xref="InterPro:IPR017870" FT /db_xref="UniProtKB/TrEMBL:Q7W8V1" FT /protein_id="CAE37330.1" FT /translation="MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYV FT DEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGES FT FTV" FT misc_feature 78937..79251 FT /note="HMMPfam hit to PF01521, HesB-like domain, score FT 2.7e-50" FT misc_feature 79195..79248 FT /note="PS01152 Hypothetical hesB/yadR/yfhF family FT signature." FT CDS 79260..79772 FT /transl_table=11 FT /gene="hscB" FT /locus_tag="BPP2031" FT /product="chaperone protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1802" FT /db_xref="GOA:Q7W8V0" FT /db_xref="HSSP:1FPO" FT /db_xref="InterPro:IPR015609" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8V0" FT /protein_id="CAE37331.1" FT /translation="MAADDHFSLFGLPARFALDPVQLEQAWRAVAARVHPDRYATASAA FT ERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREM FT LDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQEL FT SAAQPMQ" FT misc_feature 79272..79490 FT /note="HMMPfam hit to PF00226, DnaJ domain, score 2.8e-05" FT CDS 79851..81764 FT /transl_table=11 FT /gene="hscA" FT /gene_synonym="hsc" FT /locus_tag="BPP2032" FT /product="chaperone protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1803" FT /db_xref="GOA:Q7W8U9" FT /db_xref="HSSP:1Q5L" FT /db_xref="InterPro:IPR010236" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8U9" FT /protein_id="CAE37332.1" FT /translation="MRCRVRHRQAPEILKHNMALLQISEPGDSPAPHQRKLAVGIDLGT FT TNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVK FT RFMGRSAADALASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDD FT LVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYD FT LGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRAL FT LVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLESARRALRD FT AGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGN FT RPPGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVV FT QGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVA FT VKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDP FT AERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRAALAGRKLDE FT LA" FT misc_feature 79962..81713 FT /note="HMMPfam hit to PF00012, Hsp70 protein, score 2e-210" FT misc_feature 79971..79994 FT /note="PS00297 Heat shock hsp70 proteins family signature FT 1." FT misc_feature 80508..80549 FT /note="PS00329 Heat shock hsp70 proteins family signature FT 2." FT misc_feature 80901..80945 FT /note="PS01036 Heat shock hsp70 proteins family signature FT 3." FT CDS 81774..82115 FT /transl_table=11 FT /gene="fdx" FT /locus_tag="BPP2033" FT /product="ferredoxin, 2Fe-2S" FT /note="ortholog of Bordetella pertussis (BX470248) BP1804" FT /db_xref="GOA:Q7W8U8" FT /db_xref="HSSP:1I7H" FT /db_xref="InterPro:IPR018298" FT /db_xref="UniProtKB/TrEMBL:Q7W8U8" FT /protein_id="CAE37333.1" FT /translation="MPKLTVLPHPDVCPEGAVIEDAPKGVSICRVMLDNHIEIEHACEL FT SCACTTCHVVVRQGFNSLEDATDDEEDLLDKAWGLTSTSRLSCQALIGEEDLTVEIPKY FT TINHAKEQH" FT misc_feature 81801..82055 FT /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster FT binding domain, score 1.1e-08" FT misc_feature 81900..81932 FT /note="PS00814 Adrenodoxin family, iron-sulfur binding FT region signature." FT misc_feature 81918..81935 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS 82115..82309 FT /transl_table=11 FT /locus_tag="BPP2034" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1805" FT /db_xref="GOA:Q7W8U7" FT /db_xref="InterPro:IPR007479" FT /db_xref="UniProtKB/TrEMBL:Q7W8U7" FT /protein_id="CAE37334.1" FT /translation="MKWTDIYEIAAALADTHPDADPQTVRFTQLREWVLGLPGFADDPA FT HCGEKILEAIQMAWIEEMD" FT CDS 82436..83329 FT /transl_table=11 FT /locus_tag="BPP2035" FT /product="hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1806" FT /db_xref="GOA:Q7W8U6" FT /db_xref="HSSP:1B93" FT /db_xref="InterPro:IPR018148" FT /db_xref="UniProtKB/TrEMBL:Q7W8U6" FT /protein_id="CAE37335.1" FT /translation="MTTASLRFGLAANRLHHETPDAALFTWLRACSATIREMGIQLHTV FT GRTHDAIVREDMLQGYSGLVRYPYGREGGLMKLVARVTEGRDGDAPFDGAIYLIDPVDP FT SSIFPEALALKRQCITHGRPFISTLAGAIEWIEVERVLAGLAPDATAARLFDFTGQTLA FT LISHDALKEEMVAFAAEHFDLLSQFARRVATGTTGGLLNDLAWSRGWPKDRPWVHRYLS FT GPLGGDAQIAELVLEHQCQRVIFFEDPHVARQHEADIQLLERAVRVVTASATCATSPSV FT ARRWAQAVQRRQAGRA" FT misc_feature 82922..83245 FT /note="HMMPfam hit to PF02142, MGS-like domain, score FT 0.0007" FT misc_feature 83099..83125 FT /note="PS01335 Methylglyoxal synthase active site." FT CDS complement(83354..84163) FT /transl_table=11 FT /gene="paaG" FT /locus_tag="BPP2036" FT /product="probable enoyl-CoA hydratase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1808" FT /db_xref="GOA:Q7W8U5" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q7W8U5" FT /protein_id="CAE37336.1" FT /translation="MSAADQPPRYGTLTLQTDGALAILTLDRPAALNAIDIAMARDLQA FT AARWLQGRAALRVVLLRGAGKVFCAGGDIALFQGPPEDIRASLRALFTPLNDCVARIAA FT MDQLWLADVHGVAAGAGLSLALACDLAIAADDARLVTAYLKLGATPDAGMTHALAHLLG FT RRRALALLLRAEPIDAAQALQWGLVDRVAPAAERADQALAYARELAAHAPHGVAAAKRL FT LRQAPATSLEQQLEDEAAAFLAAAGRADFAEGAQAFLAKRPPRFTGA" FT misc_feature complement(83585..84100) FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family, score 5.2e-34" FT misc_feature complement(83774..83836) FT /note="PS00166 Enoyl-CoA hydratase/isomerase signature." FT CDS 84433..85257 FT /transl_table=11 FT /gene="livG" FT /locus_tag="BPP2037" FT /product="high-affinity branched-chain amino acid transport FT ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1094" FT /db_xref="GOA:Q7W8U4" FT /db_xref="HSSP:1G6H" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8U4" FT /protein_id="CAE37337.1" FT /translation="MAQSEQDPLLRVDGVTLAFGGIKALTGVGFAVSPGSITTVIGPNG FT AGKTSLFNTISGFYTPDAGSIHFLGQDITRLPAPRRARLGLARSFQNIALFRGMTVLDN FT IKLGRHAHLRSNVLDALLYLGRARREEMALRADIETRIIDFLEIDHIRHAPVAALSYGL FT QKRVELARALAMQPRILMLDEPVAGMNREETEDMARFILDARAEWGVTVLMVEHDMGMV FT MDLSDHVVVLNFGQVIADGTPAQVQADPEVIKAYLGAGEVGELRRRLAAQAA" FT misc_feature 84535..85137 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 6.2e-55" FT misc_feature 84556..84579 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 85257..86135 FT /transl_table=11 FT /gene="livH" FT /locus_tag="BPP2038" FT /product="high-affinity branched-chain amino acid transport FT system permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1095" FT /db_xref="GOA:Q7W8U3" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8U3" FT /protein_id="CAE37338.1" FT /translation="MDALFFLEVTLAGLGGGALYALAALAFVIVYKATRVVNIAIGEFL FT MMGAYAFYAFAADMQWPVWAAIGGAILASALLGALVERVAIRPMLGESPISVFMITVGL FT ASILVGVVELVWTADQRRLPEFMPRDPVMIGEAFVASKVFYGFWVAVGLAALVLLVFRY FT WRGGVALRATAADQGAAYAMGINVPRVFSLAWAAAGAMAAVAGLIVGAIGGISSSMGAF FT GLSVLVVVIVGGLDSVAGALLGGLFIGLVEAWAGAYLGGEYKLLVTFVVLVATLMARPY FT GLFGTREIERL" FT misc_feature 85257..85325 FT /note="Signal peptide predicted for BPP2038 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.805) with cleavage site FT probability 0.421 between residues 23 and 24" FT misc_feature 85272..86120 FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 2.9e-30" FT misc_feature join(85284..85343,85362..85421,85434..85502,85539..85607, FT 85665..85733,85824..85892,85935..86003,86022..86090) FT /note="8 probable transmembrane helices predicted for FT BPP2038 by TMHMM2.0 at aa 10-29, 36-55, 60-82, 95-117, FT 137-159, 190-212, 227-249 and 256-278" FT CDS 86139..87176 FT /transl_table=11 FT /gene="livM" FT /locus_tag="BPP2039" FT /product="high-affinity branched-chain amino acid transport FT system permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1096" FT /db_xref="GOA:Q7W8U2" FT /db_xref="InterPro:IPR019825" FT /db_xref="UniProtKB/TrEMBL:Q7W8U2" FT /protein_id="CAE37339.1" FT /translation="MRIATAKQTYQADEALFDTATQRVWLALLLAALALFPFLANAYWL FT YLACLVAIHVASATGLNILTGYTGLVSLGQAAFMGLGAYTVAVLEVHVGTPALLNLLAA FT GAVVMLGGLVVGVPSLRVKGLYLAIVTIAASFIAHFLFANLPLTGGTAGLQVPPARLLG FT VDLDTSFKIYWLIVPITVLMVLGAANLFRTRIGRAFIAIRDRDISAEVLGIDLLRYKLL FT SFGLSSFYAGVAGGLWAYFFRVVTPESFPLIMSIFFLAAIIVGGMGSILGAILGAVFMT FT MVPEFLKLVVGWLPVGDDALGLLSPVRTIVFGALIVGFLIFEPLGLAEIWRRVRRFFHL FT WPFRT" FT misc_feature 86139..86264 FT /note="Signal peptide predicted for BPP2039 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.872) with cleavage site FT probability 0.828 between residues 42 and 43" FT misc_feature 86151..87134 FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 2e-11" FT misc_feature join(86211..86279,86316..86384,86427..86495,86508..86567, FT 86652..86711,86799..86858,86886..86954,86958..87026, FT 87054..87122) FT /note="9 probable transmembrane helices predicted for FT BPP2039 by TMHMM2.0 at aa 25-47, 60-82, 97-119, 124-143, FT 172-191, 221-240, 250-272, 274-296 and 306-328" FT CDS 87214..88392 FT /transl_table=11 FT /gene="livK" FT /locus_tag="BPP2040" FT /product="putative amino acids binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1097" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q7W8U1" FT /protein_id="CAE37340.1" FT /translation="MRQSSIRGGLAKWLAPLAAAAVLAAPVAQAAEDLVIGGSIPLSGV FT FAFAGQGIHAGIGDYVKMVNEEGGVAGRKLVYVPEDTAYKVDASVAAFKKITSQNKVNF FT YYGDSTGFSKTINAELNRAGTMIMTGASFATSLNDPAKYPNQFMLGPDYTEMFGILLRY FT IAKEQPGAKVAFVYSDTEFGRDPITSSRAVAEKLGLKVVTEIMTPPGSVDVSTEVIKLR FT RAAPDYTIFHGYVLAPIPEFVGQGKRMGLKTRYMGTFWTMDNSTVMQMGEDADGFMGVM FT PYRYYYDDAADAPMLKKIRAMRPDYQSTGYMQGFLAAMLFAETAKRTLAADKPLTAANM FT KATLDAIKDFDTGGLIGVPISIKGNSIPVGRIYRADAKQKKMLPVSDWIVLD" FT misc_feature 87214..87303 FT /note="Signal peptide predicted for BPP2040 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.994 between residues 30 and 31" FT CDS 88400..89215 FT /transl_table=11 FT /gene="livF" FT /locus_tag="BPP2041" FT /product="high-affinity branched-chain amino acid transport FT ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1098" FT /db_xref="GOA:Q7W8U0" FT /db_xref="HSSP:1JI0" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8U0" FT /protein_id="CAE37341.1" FT /translation="MTTSAAPVLAINNIEVVYNKAVQVLRGLSLEVPRGGIVALLGSNG FT AGKSTTLKAVSRLLELEDGALVSGAIRFQGSDTAGRAPQALVRAGLAHVMEGRRVFEDL FT TVEENLVAATYALSGRAGARPDFDLVYGYFPRLYERRRGLAGYLSGGEQQMLAIGRALI FT AQPSLMLLDEPSLGLSPMLVESIFSIIARINAEQGVSMLLVEQNASVALAVAHYGYIME FT TGKVVIDGSAERLAGDPDVREFYLGVGGGGEARGFRQLKHYKRRKRWLS" FT misc_feature 88502..89071 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.2e-29" FT misc_feature 88523..88546 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 88841..88885 FT /note="PS00211 ABC transporters family signature." FT CDS 89212..91077 FT /transl_table=11 FT /locus_tag="BPP2042" FT /product="putative long-chain fatty-acid--CoA ligase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1099" FT /db_xref="GOA:Q7W8T9" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q7W8T9" FT /protein_id="CAE37342.1" FT /translation="MTRASMHPRAEGPPRGDWPALTLPQMLREQARRQPARIALRQKDY FT GIWQPIDWATYWRRACQVALGLRAAGLEPGGKVAIIAENRLEWLLAQMGAGVLGAVPVG FT VYCTSPAAEVGYVLEHAEVDMVVCEDQEQTDKVLEVAARLPGLRRIVVMETKGLRNHAE FT AERARMISFAELEARGAQCGAAEQARLEQALDAQTLDDVGLMIYTSGSTGKPKGAMISY FT RNMRGVAPGIADRLDMDAGSVHLSYLPLCHVAEQMLSTFVPVYLGSQVNFGESIRTVQE FT DLREVAPTVFLGVPRIWEKLHAAISIKMQESGRLRRWLYARALRGCAPFLELSRARYGW FT RERLVYGWHYALILRALHNFVGLRRVKVAMTGAAPIPPEVLRYFRTLGIPLIEVYGLTE FT STGMIFGQHPDRVRVGTVGEPTLGVQARVGEQGELLVRGEMVFHGYYRNPQASADTVRD FT GWLHTGDVVALEDGQYRIVDRLKDIMITAGGKNLTPSEIENAVKGSPYVKECIAIGDQR FT RYVAALIQIEYDTVAKWAELNGIAYTHFRSLAEHPRVRQLVHGEVERANAALAQVARVK FT RFHLLVKELDHDDGEVTATMKVRRASIAQAYRSEIEALYRQEEAA" FT misc_feature 89365..90747 FT /note="HMMPfam hit to PF00501, AMP-binding enzyme, score FT 1.1e-78" FT misc_feature 89824..89859 FT /note="PS00455 Putative AMP-binding domain signature." FT CDS 91156..91788 FT /transl_table=11 FT /locus_tag="BPP2043" FT /product="probable TetR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1100" FT /db_xref="GOA:Q7W8T8" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q7W8T8" FT /protein_id="CAE37343.1" FT /translation="MHASSRGTEEAAGSPRRADVIATAGELFRLHGYERTTVRELARAV FT GLQSGSLFHHFRSKEEILVAVMSEGIEEVLEQGALALAHYQDPGARLAALFRVHMWSML FT KGAGGDAMNALVYEWRSLSPAARGGVKALSDRYEDMWQDAVDDALRAGLVDGDARVIKR FT YLLGGLNLTVQWYRPQGRLEPGDFIEAMLRAALPGLPPGTGAWPLRD" FT misc_feature 91213..91353 FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 1.4e-16" FT misc_feature 91249..91341 FT /note="PS01081 Bacterial regulatory proteins, tetR family FT signature." FT CDS complement(91785..92120) FT /transl_table=11 FT /locus_tag="BPP2044" FT /product="putative membrane protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1101" FT /db_xref="UniProtKB/TrEMBL:Q7W8T7" FT /protein_id="CAE37344.1" FT /translation="MLAKIILLAACVAALAYLLLSRRARPAAAPRPLRALPAGRRRMPL FT YLGVAAVLALAGALLSAFLLVTAMAGGSGGGYRGQADFLQPVAIVLLAIGVVCAIAALV FT SFFRQRG" FT misc_feature complement(join(91800..91865,91926..91991,92055..92105)) FT /note="3 probable transmembrane helices predicted for FT BPP2044 by TMHMM2.0 at aa 5-22, 43-65 and 85-107" FT misc_feature complement(92073..92120) FT /note="Signal peptide predicted for BPP2044 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.996) with cleavage site FT probability 0.444 between residues 16 and 17" FT CDS complement(92137..93657) FT /transl_table=11 FT /gene="lysS" FT /gene_synonym="herC" FT /gene_synonym="asuD" FT /locus_tag="BPP2045" FT /product="lysyl-tRNA synthetase" FT /EC_number="6.1.1.6" FT /note="ortholog of Bordetella pertussis (BX470248) BP1102" FT /db_xref="GOA:Q7W8T6" FT /db_xref="InterPro:IPR004365" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8T6" FT /protein_id="CAE37345.1" FT /translation="MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNDFVPDAHAA FT DLHARYDGLDQEALTAAAVTVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGE FT EAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQELR FT YRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFFEVETPMLHPIPGGAAAKPFVT FT HHNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAY FT ADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFDHLTICEAILKYAEGYTQA FT QLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALFEETAEARLWRPTYIIDYPVEVS FT PLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYF FT DADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFPHLRRED" FT misc_feature complement(92146..93183) FT /note="HMMPfam hit to PF00152, tRNA synthetases class II FT (D, K and N), score 1.4e-155" FT misc_feature complement(92200..92229) FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature complement(92830..92883) FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT misc_feature complement(93229..93462) FT /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding FT domain, score 9.7e-14" FT CDS complement(93664..94419) FT /transl_table=11 FT /locus_tag="BPP2046" FT /product="probable short chain dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1103" FT /db_xref="GOA:Q7W8T5" FT /db_xref="HSSP:1E92" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W8T5" FT /protein_id="CAE37346.1" FT /translation="MTDTVAILTGASRGLGAALARGLLAPGTRLITLARRADPDLEAAA FT RTRGASLEQVQVDLSDPAAAGAAAKRLCAALPRDARRYLLINNAGTVSPVAQAAGLTDG FT AAIAGALNLNVTAVVLLTARFVAALQGLPADRRVLNISSGAGRNPNAGWGVYCAAKAAL FT DMYSRVLKQEQGQDGVRVVALAPGIVDTDMQGAIRASDPADFPALERFREFHATGKLSA FT PADVAARILAYLDRDDFGTTEIDDIRNYQ" FT misc_feature complement(93670..94416) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 5.4e-30" FT CDS complement(join(94449..95471,95473..95553)) FT /transl_table=11 FT /gene="prfB" FT /gene_synonym="supK" FT /locus_tag="BPP2047" FT /product="peptide chain release factor 2" FT /note="ortholog of Bordetella pertussis (BX470248) BP1104" FT /db_xref="GOA:Q7W8T4" FT /db_xref="HSSP:1GQE" FT /db_xref="InterPro:IPR004374" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8T4" FT /protein_id="CAE37347.1" FT /translation="MEAERQNQLVARLEDYAEREQALRRYLDYDAKSERLQVVNAELED FT PAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELALADSDDATLEAIEHD FT VDRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDWASMLLRQYLKYAERKGF FT KAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASV FT FVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRITHAPSGIVVQCQNDRS FT QHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIRSYVLDQSRIKDLRT FT NVEISNTQKVLDGDLDPFIQASLKQGV" FT misc_feature complement(94536..94874) FT /note="HMMPfam hit to PF00472, Peptidyl-tRNA hydrolase FT domain, score 5.5e-63" FT misc_feature complement(94962..95294) FT /note="HMMPfam hit to PF03462, PCRF domain, score 2.6e-49" FT CDS complement(95656..97392) FT /transl_table=11 FT /gene="recJ" FT /locus_tag="BPP2048" FT /product="single-stranded-DNA-specific exonuclease" FT /EC_number="3.1.-.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP1105" FT /db_xref="GOA:Q7W8T3" FT /db_xref="HSSP:1IR6" FT /db_xref="InterPro:IPR004610" FT /db_xref="UniProtKB/TrEMBL:Q7W8T3" FT /protein_id="CAE37348.1" FT /translation="MAARAQAQLERLVVSPRLIIRTADLQACQHLEAAGIHPLLSRLWA FT ARGVIHPEQTRMAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAV FT GLRALSAMGADVDFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVA FT AANAAGIGVVITDHHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAEL FT RRRGVYAPDGGPRLDALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRAL FT FAVAGREPRTASGFDLGFALGPRINAAGRLADMSLGIACLTTDDEAQALEMARELDNIN FT RERRTIEAEMRDQALAAMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAF FT APAGEDELRGSGRSIPDVHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAP FT AFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVR FT SQRLVGGKHLKLALERGHQRFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEH FT AA" FT misc_feature complement(96007..96216) FT /note="HMMPfam hit to PF02272, DHHA1 domain, score 5.3e-10" FT misc_feature complement(96634..97152) FT /note="HMMPfam hit to PF01368, DHH family, score 5.1e-40" FT CDS complement(97338..98315) FT /transl_table=11 FT /locus_tag="BPP2049" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1106" FT /db_xref="InterPro:IPR019304" FT /db_xref="UniProtKB/TrEMBL:Q7W8T2" FT /protein_id="CAE37349.1" FT /translation="MALTGTRTTIAAMLIVIPGALPAAAVAPELARLLPQHAPTLHGWL FT QAASARVQAFDAARQGCTPFEGWQLEQAGYQPQPGLPLGAGLGPLRAAGGTPGQPVWLA FT DLAHLMLGADQAALLDPALLDLRADESAQLFEAAAPLFADSGFGATPIDAARWRLTLPA FT GMAPQTASPAAVAGQRLRAWWTQDVAMRPWRRLLNEIQMVWYEHPVNEARAARGAAPIN FT ALWLYGGATPWPAGAPAPARVCDELAAAQRAGDWAAWLDALAVLDAAQLAPLAGPHGRP FT VQPLQLLLLGDDRRAALTLKPRAGLARWLPAPKHNWNAWWSRPV" FT misc_feature complement(98241..98315) FT /note="Signal peptide predicted for BPP2049 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.997) with cleavage site FT probability 0.712 between residues 25 and 26" FT CDS 98373..99605 FT /transl_table=11 FT /gene="lolC" FT /gene_synonym="lolE" FT /locus_tag="BPP2050" FT /product="lipoprotein releasing system transmembrane FT protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1107" FT /db_xref="GOA:Q7W8T1" FT /db_xref="InterPro:IPR011925" FT /db_xref="UniProtKB/TrEMBL:Q7W8T1" FT /protein_id="CAE37350.1" FT /translation="MARIRQRRGRRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQK FT EVRDRMLSVLPHIELYIPGAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQ FT ALRGVQVRGIDPATEGNVSNIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVL FT MLAPQGSISPAGFAPRMRQFTVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTAGVRL FT RVADMQRAPEVAAELTKVLPPYVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAF FT NLLSSLVMAVKDKQSDIAILRTLGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYN FT VDVIVPFIERLLGVQFLPREVYFISALPSDPQADDIITIGLTSLVLSLLATLYPSWRAS FT RLQPAQVLRHD" FT misc_feature 98373..98459 FT /note="Signal peptide predicted for BPP2050 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.998) with cleavage site FT probability 0.517 between residues 29 and 30" FT misc_feature join(98409..98477,99177..99245,99315..99383,99498..99566) FT /note="4 probable transmembrane helices predicted for FT BPP2050 by TMHMM2.0 at aa 13-35, 269-291, 315-337 and FT 376-398" FT misc_feature 98847..99593 FT /note="HMMPfam hit to PF02687, Predicted permease, score FT 1.1e-54" FT CDS 99598..100293 FT /transl_table=11 FT /gene="lolD" FT /locus_tag="BPP2051" FT /product="lipoprotein releasing system ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1108" FT /db_xref="GOA:Q7W8T0" FT /db_xref="InterPro:IPR011924" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8T0" FT /protein_id="CAE37351.1" FT /translation="MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAI FT VGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAGLSEKRKSALRNRSLGFVYQFHHLL FT PEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVALAR FT ALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLH FT MENGRLQPD" FT misc_feature 99715..100275 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.2e-58" FT misc_feature 99736..99759 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 100048..100092 FT /note="PS00211 ABC transporters family signature." FT CDS 100327..101154 FT /transl_table=11 FT /locus_tag="BPP2052" FT /product="putative deoxyribonuclease" FT /EC_number="3.1.21.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP1109" FT /db_xref="GOA:Q7W8S9" FT /db_xref="HSSP:1J6O" FT /db_xref="InterPro:IPR018228" FT /db_xref="UniProtKB/TrEMBL:Q7W8S9" FT /protein_id="CAE37352.1" FT /translation="MLIDTHCHLDAAEFDADRMAVARAAREAGVQAIVIPAVERANFAT FT VRQLAHAVDSGAYALGIHPLYVARARDEDLDSLRRAIESALPDPRFVAIGEIGLDFFVA FT EIASGAPRERQERFYAAQLDLAAEYGLPVLLHVRRSQDILLKHLRRRPGVPGGIAHAFN FT GSAQQAGAFVEQGFALGLGGAMTYPRALQIRRHAADIGLDHLVLETDAPDIPPAWLYEP FT ERRNTPGQLPRIAAELAALRGQAVADVARATTTTALRVLPRLGALLQDRAATP" FT misc_feature 100330..100356 FT /note="PS01137 Uncharacterized protein family UPF0006 FT signature 1." FT misc_feature 100345..101112 FT /note="HMMPfam hit to PF01026, TatD related DNase, score FT 1.2e-52" FT CDS 101436..104666 FT /transl_table=11 FT /gene="sphB3" FT /locus_tag="BPP2053" FT /product="serine protease" FT /note="ortholog of Bordetella pertussis (BX470248) BP1110" FT /db_xref="GOA:Q7W8S8" FT /db_xref="InterPro:IPR005546" FT /db_xref="UniProtKB/TrEMBL:Q7W8S8" FT /protein_id="CAE37353.1" FT /translation="MAQASARGMGLRITSLAAALLGVYGAAGAAENRLECIGACPPGQP FT VAGAHYSGTNLSANREWVVYGEGSNAVFTLQGGSVTASGGLMGAVNAADGARVYLNQVS FT VRTDAGNGWEAPGVRAEYGALVNVRGGSIATVGGGSYGVQSLDSGTMIELNGTDIRTTD FT AYSDGLRAEFGGSIRAVGLTINTTGEHAVGAMGADDGTIALRDSRITTSGVDAYGLGTE FT SQVLSPGGVLQVSNTAIQTSGKNAHGVYLQGGSSLNMSGGSIRTTGSGAAGLRVSNGSS FT VALNGVEVVASGPSLLSTLSATRQQSIVVGAGSNLTRNDGRLLLVRRVAGGELGQVTLT FT LKSGSYAAGNIENLAADGSRESSALTIVDVQSGAQWAGLVIDDTTAIVNGSQSGQHSGF FT STAGDMVLEGGSAPVTFTGVSNIGGSSSLGAGSQTTFGGATTIGQSLAVLPGGSVAFNG FT PLTIGESVTGGQGTALSFNAPAIIGANVQGAGGAAFTFSGPAQVGGSVQGLDGASFRFS FT TSAPTAIAGGLSLAGGSSLGGGSPTTPIVVTGGADAVSGAILGGNLDIGGALRMTGASL FT APGNSIGTVTVGSVGALSGSTYLAEVNAKGQSDLLVVRSGNVDLAGVSLVVGQENGTGG FT YVLNHDYTIIKTEAGKIVGEFAAASLDESLASTLVKLDPVKYGAQATQVSLSPDADKLA FT AARAGLTRNQSAVLDGALSVAGRNASADAVMLMSDTGQRAGALDQLSGEVHGSAVSALY FT SNTQLLNRTVARRMSANLGAGLLAGAPTAQAAGPAAASAMPGTAAYPLWADVVGNWSSF FT DAKDNAAKAKSNTAGLFIGGDVAVGAGWRVGGALGFTDGRIKADAVDSRSDVTSYTAAL FT YGGNSWAAGKGKLNFLAGVGYTHHDIDSRRSVDVGGAQTLKADYKANTTQLFAELGYQV FT PVGASSSVEPYAGLAWFNNHSDSFDEDGGPAALHGSGQTDQITTFTLGLRGNTALQLGA FT TETRLSAGLGWRHANGDVDATRKLAFIQGGGTAFTVAGSPVARDAAVLDLAAEVDVGRN FT AALGLAYGGQFGNGNKENTGSLYLKVRF" FT misc_feature 101436..101522 FT /note="Signal peptide predicted for BPP2053 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.977) with cleavage site FT probability 0.936 between residues 29 and 30" FT misc_feature complement(104776..104783) FT /note="Duplication due to IS1001 insertion" FT repeat_region 104784..104796 FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT repeat_region complement(104784..106090) FT CDS complement(104787..106007) FT /transl_table=11 FT /locus_tag="BPP2054" FT /product="transposase" FT /note="transposase for IS1001 element" FT /db_xref="GOA:Q7W8S7" FT /db_xref="InterPro:IPR002560" FT /db_xref="UniProtKB/TrEMBL:Q7W8S7" FT /protein_id="CAE37354.1" FT /translation="MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCE FT QCGARCRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRYQRVT FT DRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPDWSKIEYLAMDEFA FT LHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQLPPGAAQRIKAVAIDMTTAYEL FT EIQAHSPQAEIVYDLFHVVAKYGREVIDRVRVDQANQLRQDRPARRIIKSSRWLLLRNR FT DNLDRQQAVRLDELLQANQPLLTVYVLRDELKRLWFYQRPAWARQAWNHWYKQAEQSGI FT AALNTFAQRLKGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFSLKIRA FT AFPGNAR" FT misc_feature complement(104928..105917) FT /note="HMMPfam hit to PF01610, Transposase, score 9.8e-128" FT repeat_region complement(106078..106090) FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1001 element" FT misc_feature complement(106091..106098) FT /note="Duplication due to IS1001 insertion" FT CDS 106189..106953 FT /transl_table=11 FT /locus_tag="BPP2055" FT /product="probable short chain dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1454" FT /db_xref="GOA:Q7W8S6" FT /db_xref="HSSP:1FDW" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W8S6" FT /protein_id="CAE37355.1" FT /translation="MQHVFITGASSGLGQALARRYAADGARLGLLGRRAQALEALASSL FT PGQHRCYAVDVRDRAALHAAAQDFIAHCGGRVDVVIASAGVSAGTLTEAGEDYAVFKEI FT VDTNLLATVATFEPFIAGMRAARAGRLVGIASVAGVRGLPGAGAYSASKAAVATYCESL FT RLELAQAGVRVVTIAPGYVKTAMTAHNPYAMPFLMEADAFAGRAHAAIARGVSYRVIPW FT QMGVVAKLMRLLPDAVYDRLARDAPRKPRRGQ" FT misc_feature 106192..106932 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 6.5e-39" FT misc_feature 106594..106680 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS complement(107134..107778) FT /transl_table=11 FT /gene="gpmB" FT /locus_tag="BPP2056" FT /product="probable phosphoglycerate mutase 2" FT /EC_number="5.4.2.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP1455" FT /db_xref="GOA:Q7W8S5" FT /db_xref="HSSP:1H2E" FT /db_xref="InterPro:IPR013078" FT /db_xref="UniProtKB/TrEMBL:Q7W8S5" FT /protein_id="CAE37356.1" FT /translation="MTEIWFIRHGETDWNRQRRLQGWQDIPLNESGREQARLLAERLRD FT TASEHPFAALYSSDLKRAHDTAASLSAALQLRVRTEPGIRERGFGVLEGLEMENLEQQA FT PQAAQAWRSRDPLRALEGGETLGQFQARIIATVDDLAARHASERILAVTHGGALDIIWR FT HASGVPLDAPRYAALLNVSINRVAIAQRKWEVLGWGDVEHIGAETGNDVTP" FT misc_feature complement(107185..107775) FT /note="HMMPfam hit to PF00300, Phosphoglycerate mutase FT family, score 3.8e-27" FT CDS complement(107789..108688) FT /transl_table=11 FT /locus_tag="BPP2057" FT /product="LysR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP1456" FT /db_xref="GOA:Q7W8S4" FT /db_xref="HSSP:1IXC" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8S4" FT /protein_id="CAE37357.1" FT /translation="MEIYQIRAFVTVARLGNLTKAAEALSLTQPAVTAQLKALEQSLGV FT ALFDRAAGRLSLAKAGEALLPTAEALLVLGAQLKSEARQLQGQLQGVIDLGVPSEQPDF FT LRLGELAAALRQRLPLVELKTHVLPSTALLEQVGTARLAGALTIVAHPPRGVTWHALRS FT VRYRIALPASLADTLKRAGWRDIAQLPWLDGPSGSHLHLLLRDMFERHGLAPRVVMQND FT DQSNLDALVRAGAGCALLREETALAGAAAGDFIVWGQARADATLGFIAPPEQAGEPMLV FT ALISMIQKIWKPGAAVAT" FT misc_feature complement(107813..108433) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.6e-16" FT misc_feature complement(108503..108682) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 9.1e-22" FT misc_feature complement(108548..108640) FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS complement(108736..109821) FT /transl_table=11 FT /locus_tag="BPP2058" FT /product="probable ATP-binding component of ABC FT transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1457" FT /db_xref="GOA:Q7W8S3" FT /db_xref="HSSP:1Q1B" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8S3" FT /protein_id="CAE37358.1" FT /translation="MKKVSVECRNIRLSYGRNEVLKDISIHIEPGEFFALLGPSGSGKS FT TLLRLIAGFNRQSHGQLLVDGRDIGATPPWDRNIGMVFQNYALWPHMTVWDNVAFGLVE FT RRLPRAEIRDKVAAALELVGLADFGRRRPNQLSGGQQQRVALARTIVIEPQVLLLDEPL FT SNLDKKLRVQMRQDLLSLQRRLGITTIFVTHDQEEAMTTADRMAVLDHGVVQQIGAPST FT LFDYPVNRFVANFVGTMNVLEGEVRERSRGGVVLAVDGVGELHLPVNGDAPQAGRLAAS FT FRPHTVLIEMADGTGDARYVWLPGVVESSEFLGEFTRYQVQVGEQRLTADQHHLAGLSP FT FPVGAPVAVGLEPTQIRLLAA" FT misc_feature complement(109186..109731) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.6e-67" FT misc_feature complement(109372..109416) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(109687..109710) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(109818..111527) FT /transl_table=11 FT /locus_tag="BPP2059" FT /product="probable permease component of ABC transporter" FT /note="ortholog of Bordetella pertussis (BX470248) BP1458" FT /db_xref="GOA:Q7W8S2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q7W8S2" FT /protein_id="CAE37359.1" FT /translation="MTSTGTFRLPAGPALAALLVLAFLALFLVFPVGTVFYTAFVNADG FT SFTLGHFGAVFNQPLMKEAFFNSLYVAGWSSLLASLIAVPLAYFTVRFEFRGALLIQTL FT GVLPLIMPPFVGAMAMQLIFGRSGSVNLLLDDWLGITLPFMDGLNGVIFVESLHYFPFI FT LMNLVVALRNIDGSMEEAAFNLGSRGFRLFCRIIFPLALPGYLAGTSLVFVKVFDDLGT FT PLVLGTTNMLAPQAYLRITQVGLEDPLGYVISVIMIGFSILALWLSARVLKGKDYSTLQ FT KGGNAIHKRRLRPVESVLAYAWIGAVLLLVLSPHLGVLLLSLASVWSYAPLPDGYTLAH FT YTAVFTESQGMIANTLLYCGLAAGVDVVLGTAIAYLMLRTRLPARQWLDFIASAALAIP FT GIVLAIGYLRTFRGVEIPGTGVLLTSSWVLIMIAYSVRRLPYALRSCVAALQQINVSLE FT EAAESLGASRLRTIRRIVVPLMAGGMLAGFVTSFITAAVELSATIMLVTRDSQAPMSYG FT IYLYMQSAAGRGPGAALGVLAVVAVGIGTYVSHLLVERASARQRPARSGESS" FT misc_feature complement(join(109869..109934,110037..110102, FT 110220..110285,110301..110357,110394..110459, FT 110565..110630,110712..110777,110886..110951, FT 111015..111080,111153..111218,111255..111320, FT 111423..111488)) FT /note="12 probable transmembrane helices predicted for FT BPP2059 by TMHMM2.0 at aa 13-35, 69-91, 103-125, 149-171, FT 192-214, 250-272, 299-321, 356-378, 390-409, 414-436, FT 475-497 and 531-553" FT misc_feature complement(109959..110183) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.1e-12" FT misc_feature complement(110094..110180) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT misc_feature complement(110802..111020) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 0.0092" FT misc_feature complement(110931..111017) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT misc_feature complement(111399..111527) FT /note="Signal peptide predicted for BPP2059 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.914 between residues 43 and 44" FT CDS complement(111604..112923) FT /transl_table=11 FT /locus_tag="BPP2060" FT /product="putative regulatory lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2271" FT /db_xref="GOA:Q7W8S1" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q7W8S1" FT /protein_id="CAE37360.1" FT /translation="MQALQRQLAAIMAACAPALAGTVTVITSFPKDLTQAYKAAFEKAH FT PDIKLEILNKNTVSGIAFVRATPAGQRPEVFWASAPDAFEVLGRDKLLAKAPDVANPAV FT PDKIGSYPINDPSGMYMGQALAGYGIIYNTRYIKANKLPAPVEWKDLLAPHWFGHVGIT FT APSRSGTMHLTVETILQGEGWNDGWGTLLRMSGNASAVTERSFGVPDGVNNGQFGAGPV FT IDFFGLSSKYSKFPVDFVYPSETAIVPANIALIEGAKNTEEGKKFIAFTLSQAGQELLL FT EPKISRLPVLPYAALAGKIPPGYPDPAEIAKRSKVHFDADLSQARYYVVQSLFDQTITF FT RLKELQAATKAIYDAEAKLGERAGQGKAAELLAQARQLAWTPLVDAQRAADPAFLKLFA FT GNKKDAAVNQQITQLEGEWNGKARANYEQAQKLAREAAAL" FT misc_feature complement(111874..112851) FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding protein, score 0.0014" FT CDS 113183..114496 FT /transl_table=11 FT /locus_tag="BPP2061" FT /product="putative xanthine/uracil family permease" FT /note="ortholog of Bordetella pertussis (BX470248) BP2269" FT /db_xref="GOA:Q7W8S0" FT /db_xref="InterPro:IPR006042" FT /db_xref="UniProtKB/TrEMBL:Q7W8S0" FT /protein_id="CAE37361.1" FT /translation="MSNTYFPRWRLADDTVPGAVIAPDERLSWPKNIAMGAQHVVAMFG FT STVLAPLLMGFDPNVAILMSGIGTLIFFLFVGGRVPSYLGSSFAFIGGVVAVTGYVAPG FT ANANIGVALGAIIACGLVYALIGLVVWAASARGNGARWIEAMMPPVVTGAVVAVIGLNL FT APIAAKGAMGSSGFEASMALMTILCVGGIAVYTRGMVQRLLILVGLVLACVIYAVCANG FT LGLGAPMDFAKVAAAPWFGLPSFAAPVFEPQAMGLIVPVAIILVAENLGHVKAVAAMTG FT QDLDRCVGRAFVGDGVATMVSGAVGGTGVTTYAENIGVMAVTRIYSTLVFVVAAVIALV FT LGFSPKFGALIQTIPGPVLGGMSVVVFGLIAIAGARIWVVNQVDFSDNRNLIVAAVTLV FT LGAGDFSVKLGDFSMNGIGTATFGAIILYALLGLARRR" FT misc_feature 113270..114412 FT /note="HMMPfam hit to PF00860, Permease family, score FT 4.4e-107" FT misc_feature join(113342..113410,113429..113497,113510..113578, FT 113615..113683,113711..113770,113789..113857, FT 113927..113995,114056..114124,114167..114235, FT 114254..114322,114416..114484) FT /note="11 probable transmembrane helices predicted for FT BPP2061 by TMHMM2.0 at aa 54-76, 83-105, 110-132, 145-167, FT 177-196, 203-225, 249-271, 292-314, 329-351, 358-380 and FT 412-434" FT misc_feature 114242..114304 FT /note="PS01116 Xanthine/uracil permeases family signature." FT CDS complement(114527..116164) FT /transl_table=11 FT /locus_tag="BPP2062" FT /product="methyl-accepting chemotaxis protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP2268" FT /db_xref="GOA:Q7W8R9" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q7W8R9" FT /protein_id="CAE37362.1" FT /translation="MPMLERIKVRTAMVAVFACFLAVLMLSGALTWRNAGRSAAEIEGL FT NQVAVNQVDPLFEASGAALRARVALLEALANLQANHLDPVATLHQQAGAAQRQAATQFQ FT RYVDVPKEPAAAELAATLQTRWRAYQSVLDELAAAVDAGQAEPALAAMNRAQQAEHAFQ FT RDMEAFLARVQAHSDEVRSGAEDTHVVARWSAIALAALGVLLTLAGWLFVRRAVLRPLL FT EAGHHFDRIADGDLTARIEVRSANEIGALFAALKRMQEGLTRTIAVMRRGVDEINVGAA FT EISAGNANLSSRTEEQAAALEETAATMEELATTVKQNADNAAQANQLAAVSMQVAQRGG FT ESVAQVVQTMHGISASSRQIADIVTVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVA FT GEVRSLAQRAAQAAKEIKALIESSVATVRAGSQQVASAGGTMDEVVASVQRVADIMGEI FT SAASAQQASGIDQVSLAISQMDETTQQNTALVEQAAAAATAMEEQARHLAAAAAVFRTQ FT GGAIIDVAAAPLAGPAGGHAALPPAAAR" FT misc_feature complement(114614..115312) FT /note="HMMPfam hit to PF00015, Methyl-accepting chemotaxis FT protein (MCP) signaling domain, score 2.4e-93" FT misc_feature complement(115373..115582) FT /note="HMMPfam hit to PF00672, HAMP domain, score 4.5e-13" FT misc_feature complement(join(115529..115594,116069..116134)) FT /note="2 probable transmembrane helices predicted for FT BPP2062 by TMHMM2.0 at aa 10-32 and 190-212" FT misc_feature complement(116048..116164) FT /note="Signal peptide predicted for BPP2062 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.991) with cleavage site FT probability 0.304 between residues 39 and 40" FT CDS 116788..117264 FT /transl_table=11 FT /gene="greA" FT /locus_tag="BPP2063" FT /product="transcription elongation factor" FT /note="ortholog of Bordetella pertussis (BX470248) BP2267" FT /db_xref="GOA:Q7W8R8" FT /db_xref="HSSP:1GRJ" FT /db_xref="InterPro:IPR018151" FT /db_xref="UniProtKB/TrEMBL:Q7W8R8" FT /protein_id="CAE37363.1" FT /translation="MSAIPLTVRGAERLQQELHRLKTVERPAVISAIAEARAQGDLSEN FT AEYDAARERQGFIEGRISELEGTLSNAHLIDPTALDAEGRAVFGATVEIEDLDSGDRLT FT YQIVGDVEADIKSNLISVSSPVARALIGKSEGDVVEVKVPAGVREYEVIGVRYL" FT misc_feature 116788..117009 FT /note="HMMPfam hit to PF03449, Prokaryotic transcription FT elongation factor, GreA/GreB, N-terminal domain, score FT 1.2e-37" FT misc_feature 116806..116931 FT /note="PS00829 Prokaryotic transcription elongation factors FT signature 1." FT misc_feature 117028..117258 FT /note="HMMPfam hit to PF01272, Prokaryotic transcription FT elongation factor, GreA/GreB, C-terminal domain, score FT 6.4e-32" FT misc_feature 117148..117198 FT /note="PS00830 Prokaryotic transcription elongation factors FT signature 2." FT misc_feature 117166..117189 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(117565..117570) FT /note="Duplication due to IS1002 insertion" FT CDS complement(117566..118516) FT /transl_table=11 FT /locus_tag="BPP2064" FT /product="transposase for IS1002" FT /note="transposase for IS1002 element" FT /db_xref="GOA:Q7TT87" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:Q7TT87" FT /protein_id="CAE37364.1" FT /translation="MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKW FT LARFRSEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSLATVA FT RYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVGHRITGDRAQNRNR FT GIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQATAYYASLGVRIDRVMTDNGSG FT YVSRTFRAVCVELGIRHIRTRPYTPKTNGKAERLVQTCLREWAYARPYTSSAERQAALQ FT PFIDRYNWCRPHSALGHQPPITRIPDVNNLLRIDT" FT repeat_region 117571..117594 FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1002 element" FT repeat_region complement(117571..118601) FT /note="IS1002 insertion sequence" FT misc_feature complement(117599..118135) FT /note="HMMPfam hit to PF00665, Integrase core domain, score FT 6.8e-30" FT repeat_region complement(118578..118601) FT /rpt_type=INVERTED FT /note="Inverted repeat for IS1002 element" FT misc_feature complement(118602..118607) FT /note="Duplication due to IS1002 insertion" FT CDS complement(118656..119258) FT /transl_table=11 FT /locus_tag="BPP2065" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1079" FT /db_xref="GOA:Q7W8R7" FT /db_xref="HSSP:1JO0" FT /db_xref="InterPro:IPR001890" FT /db_xref="UniProtKB/TrEMBL:Q7W8R7" FT /protein_id="CAE37365.1" FT /translation="MPISELTSRERSDLRSAAHPLRPVVLIGDNGLTDAVLKEIDLALT FT AHELIKVRAGGDDREAREAMLATICDTLSCAAVHHLGKTLILFRPDLRAAAAKAAADTP FT AKRRPSEPHTPKKMAAEGKRLTKTRPARKAAEAAAPAAGARPGRDDLNQAGRPARPSTR FT KASPGHAIPRRSGSALSLRAGARGGLAGRKPARANKQ" FT misc_feature complement(118992..119204) FT /note="HMMPfam hit to PF01985, Uncharacterised protein FT family UPF0044, score 0.0024" FT misc_feature complement(119007..119030) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 119277..119909 FT /transl_table=11 FT /gene="rrmJ" FT /gene_synonym="ftsJ" FT /gene_synonym="mrsF" FT /locus_tag="BPP2066" FT /product="ribosomal RNA large subunit methyltransferase j" FT /EC_number="2.1.1.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP1078" FT /db_xref="GOA:Q7W8R6" FT /db_xref="HSSP:1EJ0" FT /db_xref="InterPro:IPR002877" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8R6" FT /protein_id="CAE37366.1" FT /translation="MAKNKFSKDWIHQHINDPYVKLAQQKGYRARAAFKLLEILDAEKL FT MRRGDIVVDLGSAPGSWSQVARERLAGPGGAVDGRIIALDLLPMEPVAGVEFIQGDFRE FT EAVLEQLARMVEGQPVDLVISDMAPNLSGVGVADSARIQHVCELALEFACAHLKPNGAL FT IVKAFHGSGFSQIVQSYKQRFKRVVERKPKASRDKSSETFLVARDLK" FT misc_feature 119358..119903 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF01728, FtsJ-like methyltransferase, FT score 3.5e-58" FT CDS 120147..122033 FT /transl_table=11 FT /gene="ftsH" FT /gene_synonym="hflB" FT /gene_synonym="mrsC" FT /gene_synonym="tolZ" FT /locus_tag="BPP2067" FT /product="cell division protein" FT /EC_number="3.4.24.-" FT /note="ortholog of Bordetella pertussis (BX470248) BP1077" FT /db_xref="GOA:Q7W8R5" FT /db_xref="HSSP:1IY1" FT /db_xref="InterPro:IPR003960" FT /db_xref="UniProtKB/TrEMBL:Q7W8R5" FT /protein_id="CAE37367.1" FT /translation="MNNSFSKVAVWMVIALVLFTVFKQFDGRAQTQDGVSYTQFMDDAK FT AGRIRKVDVQGDVLYVTPDAGRPYSLTSPGDLWMVSDLLKYGVQVSGKAREEPSLLMSI FT FVSWFPMLLLIGVWIFFMRQMQGGGRGGAFSFGKSRARMLDENTNQVTFADVAGCDEAK FT EDVQELVDFLRDPSKFQKLGGRIPRGVLMVGSPGTGKTLLAKAIAGEAKVPFFSISGSD FT FVEMFVGVGAARVRDMFENAKKHAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQML FT VEMDGFESGQGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILKVHMRKV FT PLSPNVDATILARGTPGFSGADLANLVNEAALFAARRNGRTVDMSDFEKAKDKIIMGAE FT RRSIVMPEEERKNTAYHESGHAIVARMLPKTDPVHKVTIIPRGRALGVTMQLPETDRYS FT MDKERLLNTIAVLFGGRIAEEIFMNQMTTGASNDFERATAIARDIVTRYGMTDELGPMV FT YAENEGEVFLGRSVTKTTHVSEATMQKVDSEIRRIIDEQYGVARKILEDNRARVEVMTS FT ALLEWETIDADQIDDIVNDRPPRPPKTPQGPSDTSDTLPTGLAAGGNTAAAV" FT misc_feature 120147..120239 FT /note="Signal peptide predicted for BPP2067 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.702) with cleavage site FT probability 0.419 between residues 31 and 32" FT misc_feature join(120159..120212,120444..120512) FT /note="2 probable transmembrane helices predicted for FT BPP2067 by TMHMM2.0 at aa 5-22 and 100-122" FT misc_feature 120540..120563 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 120711..121274 FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA), score 3.9e-95" FT misc_feature 120726..120749 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 121023..121079 FT /note="PS00674 AAA-protein family signature." FT misc_feature 121290..121922 FT /note="HMMPfam hit to PF01434, Peptidase family M41, score FT 6.6e-102" FT CDS 122052..122894 FT /transl_table=11 FT /gene="folP" FT /gene_synonym="dhpS" FT /locus_tag="BPP2068" FT /product="dihydropteroate synthase" FT /EC_number="2.5.1.15" FT /note="ortholog of Bordetella pertussis (BX470248) BP1076" FT /db_xref="GOA:Q7W8R4" FT /db_xref="HSSP:1EYE" FT /db_xref="InterPro:IPR006390" FT /db_xref="UniProtKB/TrEMBL:Q7W8R4" FT /protein_id="CAE37368.1" FT /translation="MANNFQCGRFEFDLERPLVMGIVNVTPDSFSDGGEHADTDSAIAH FT ARQLIDEGAHILDLGGESTRPGAQPVSAAEELARILPLIEGLRDCGVPLSIDTFKPEVM FT RAVLDAGADMINDIYGFRQPGAIDAVARSRCGLCVMHMKGEPRTMQEAPEYADLMGEIG FT VFLGARAQRLRAAWVDPRRIVLDPGFGFGKTMDQNYQLLRRLASLRVSSYPLLVGVSRK FT SMIGAATGKPVGDRLAGSVAAALACVARGAAIVRVHDVAATVDALKVWQAAEQGAVPT" FT misc_feature 122106..122153 FT /note="PS00792 Dihydropteroate synthase signature 1." FT misc_feature 122115..122837 FT /note="HMMPfam hit to PF00809, Pterin binding enzyme, score FT 1.5e-110" FT misc_feature 122208..122249 FT /note="PS00793 Dihydropteroate synthase signature 2." FT CDS 122891..124249 FT /transl_table=11 FT /gene="mrsA" FT /locus_tag="BPP2069" FT /product="phosphoglucomutase/phosphomannomutase" FT /note="ortholog of Bordetella pertussis (BX470248) BP1075" FT /db_xref="GOA:Q7W8R3" FT /db_xref="InterPro:IPR006352" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8R3" FT /protein_id="CAE37369.1" FT /translation="MSQRKYFGTDGVRGEVGGPVINAAFALRLGYAAGRVLAREHREHA FT SGRGRNRPQVVIGKDTRISGYMLESALEAGLSAAGIDVLLAGPVPTPAVAYLTRTLRLA FT AGIVISASHNPYQDNGIKFFSAHGMKLPDDIEAAIEQALDEPLGCVGSEELGRARRMAD FT AQGRYIEFCKSTFPHDLDLNGLKLVVDAAHGAAYNVAPHVFRELGAEVHAIGVSPDGFN FT INKGVGALHPESLAEEVRARGADLGIALDGDADRLQMVDGTGRIYNGDELLYAIVRERM FT QRGPVAGVVGTLMTNYGLERQLQQIGVGFERANVGDRYVLEQMQARGWLYGGESSGHLL FT CLDCHTTGDGTIAALQVLTALRRADATLAEWVADLRMYPQKMINVPLAPGLDWKTHDGL FT ARARGAVEAELAGRGRVLIRASGTEPKLRLMVEAEDEALAQASAQKLADSLGA" FT misc_feature 122891..123352 FT /note="HMMPfam hit to PF02878, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain I, score 9.8e-62" FT misc_feature 123206..123250 FT /note="PS00710 Phosphoglucomutase and phosphomannomutase FT phosphoserine signature." FT misc_feature 123386..123688 FT /note="HMMPfam hit to PF02879, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain II, score 1.3e-35" FT misc_feature 123692..124024 FT /note="HMMPfam hit to PF02880, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain III, score 1.6e-18" FT misc_feature 123911..123928 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature 124034..124243 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF00408, FT Phosphoglucomutase/phosphomannomutase, C-terminal domain, FT score 2e-08" FT CDS 124470..125264 FT /transl_table=11 FT /locus_tag="BPP2070" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1074" FT /db_xref="UniProtKB/TrEMBL:Q7W8R2" FT /protein_id="CAE37370.1" FT /translation="MLELVRIDTGSTAATAWPGAAPRTLAVGLARTAEEVEQIQRLRYD FT VFTEDMGAVFPQAQDGVEQDRFDQWCEHLMVRELDTGRVVGTYRILTPEKAREAGGYYS FT ESEFDLSGLGALREQLVEVGRSCTHADYRNGAVIMLLWSGLAEYLRRGGYEYVLGCASV FT SLRDDGVTAAEVWRNVARHLDDPALPRVRPLHRYPIERLNSTLPARVPPLIKGYLKLGA FT KVCGEPAWDPDFNAADFPVLLSMAGMDERYRRHFGLDREARR" FT CDS complement(125484..126977) FT /transl_table=11 FT /gene="ppx" FT /locus_tag="BPP2071" FT /product="exopolyphosphatase" FT /EC_number="3.6.1.11" FT /note="ortholog of Bordetella pertussis (BX470248) BP1073" FT /db_xref="GOA:Q7W8R1" FT /db_xref="InterPro:IPR003695" FT /db_xref="UniProtKB/TrEMBL:Q7W8R1" FT /protein_id="CAE37371.1" FT /translation="MDHLLAAVDLGSNSFRLSIGRVVQQDGTAQIYQIDRLKETVRLAA FT GLDQDKNLGEDALARALAVLERFGERLRSFHPSRVRAVATNTFRVARNTRDFLPRAERA FT LGFPIEVIAGREEARLIFSGVAHSLPPSLNRRLVIDIGGGSTEVIIGKGVEPNLMSSLY FT MGCVSFSRQFFGDGVVDSHQMKQAELAARREIEVIAKQYRKTGWKEAYGSSGTAKALYA FT ILTECGFSTRGITRAGLAKLKDRIIRSGRVIPAELPGIKLERADVLPGGLAIMSALFDE FT LNIDVMHTGDGALRLGVLYDLLGRDDEHDKRHESVQQFMKRYHVDANQARRVRQAALAL FT FDVLLPDGDGHERAELRLALGWAADLHEVGLSIAHNAYHKHTAYVLEHADMPGFSNDEQ FT ELLALLALGHHGKLSKLESLVANRSQWIAILCLRLAALLFRRREDITPLPLAVSIKGTS FT IVVRAQQAWLNRHPLSDFTLRAEDGEWSKVGFSFELLET" FT misc_feature complement(126060..126926) FT /note="HMMPfam hit to PF02541, Ppx/GppA phosphatase family, FT score 5.1e-86" FT CDS 127213..129294 FT /transl_table=11 FT /gene="ppk" FT /locus_tag="BPP2072" FT /product="polyphosphate kinase" FT /EC_number="2.7.4.1" FT /note="ortholog of Bordetella pertussis (BX470248) BP1072" FT /db_xref="GOA:Q7W8R0" FT /db_xref="InterPro:IPR003414" FT /db_xref="UniProtKB/TrEMBL:Q7W8R0" FT /protein_id="CAE37372.1" FT /translation="MTSRPPSEPLLLNRELSLLKFNERVLAMAENPRVPLLERLRYVCI FT VSSNLDEFFEIRISTLKEQQRQTPTLVGPDGMTADEAFERVQVKVHALVASQYALLNDD FT ILPRLQAEGIVLHHASEWNAQQQEWAREVFNRDVMPLLTPIGLDPAHPFPRVYNKSLNF FT IVALSGADAFGRQASIAVVQAPRALPRLIKMPPEISGHPDGYILLTSLLRAFVGELFPG FT LEMLGCYQWRVTRNSDLFVDEEEVTNLRHALQGELSQRNFGAAVRLEIDKLTPPDLEAY FT LQREFSLAPEDTYRVSGPVNLSRLMQLCNSNTRPDLLFPAYLAPVPAPFDRVGEKPAEL FT FAAVAEQDRLLHHPYQSFQPVIDFLTAAALDPDVMAIKQTIYRTGEDSELMQILLAAAR FT AGKEVTVVVELMARFDEQTNINWAARLEEVGAHVVYGVVAHKTHAKMALVLRREKGRLR FT RYAHLGTGNYHPRTARLYTDFGLLTADPRLCEDMDKVFTQLTGLGARRSLKALLQSPFS FT LHDGMVSLIRAETRAARAGKRARIMAKMNSLLEVQVIEELYKASQAGVKIDLIVRGVCA FT LRAGVPGLSENIRVRSIVGRFLEHSRVFYFYADGAETVYLSSADWMDRNFFRRVEIAFP FT VYDKTLRKRVIDEAFTYALRDNQLAWQQQADGTYARVRNRREAYDVQEALIQRLGQDG" FT misc_feature 127228..129285 FT /note="HMMPfam hit to PF02503, Polyphosphate kinase, score FT 0" FT CDS 129489..130529 FT /transl_table=11 FT /gene="pstS" FT /gene_synonym="phoS" FT /locus_tag="BPP2073" FT /product="phosphate-binding periplasmic protein precursor" FT /note="ortholog of Bordetella pertussis (BX470248) BP1071" FT /db_xref="GOA:Q7W8Q9" FT /db_xref="HSSP:1IXH" FT /db_xref="InterPro:IPR005673" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q9" FT /protein_id="CAE37373.1" FT /translation="MFKRVFKQISIGAALSAAVFAAQAADVTGAGASFPYPIYAKWASD FT YKAATNNAVNYQSIGSGGGQQQIKAKTVDFGASDDPLKAEDLEKNGLLQFPAVIGGTVP FT VINVDGIAPGQLKLSGAVLADIFLGKVKKWDDAAIKALNPDLKLPSADIVVVHRSDGSG FT TTFGWTNYLSKVSPAWKEQVGEGKAVKWPTGQGGKGNEGVAAYVGQLKNSIGYVEYAYA FT KQNKLAWTQLQNKDGKFVQPEQKAFAAAAANADWKSAPGMGVVLTNEPGADSWPVTAAT FT FILVHKSQDKPVQGRAVLEFFDWAFKNGAKSAEALDYVPLPEAVTTEIRAAWGEVKGAD FT GKAVWQ" FT misc_feature 129489..129560 FT /note="Signal peptide predicted for BPP2073 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.993 between residues 24 and 25" FT misc_feature 129558..130475 FT /note="HMMPfam hit to PF01449, Phosphate-binding protein, FT score 3e-137" FT CDS 130664..131680 FT /transl_table=11 FT /gene="pstC" FT /gene_synonym="phoW" FT /locus_tag="BPP2074" FT /product="phosphate transport system permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1070" FT /db_xref="GOA:Q7W8Q8" FT /db_xref="InterPro:IPR011864" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q8" FT /protein_id="CAE37374.1" FT /translation="MSAVMDNSVPLPSSTADSTTTGTPSPMKQNNNALMDALFKNLTRT FT FAFLVFILLAAIMISLIYGSRESLAKYGLSFLWLNDWDPVQQNYGAVVPIIGTLLTSFI FT ALLIAVPVSFGIAIFLTELAPTWLRRPLGTAVEMLAAIPSIIYGMWGLFVFVPVFQQYV FT QPALIATLGSVPIIGGLFAGPLFGIGIFTAGLILSIMIIPFIAAVMRDVFELVPPMLKE FT SAYGLGSTTWEVMWRVVLPFTKSGVIGGIMLGLGRALGETMAVTFVIGNAFRWSGSLFS FT PGNSIASALANEFNEAGGIQKSALLELGLILFLITTVVLAFSKMLLVRLSRAEGRQA" FT misc_feature join(130787..130855,130958..131026,131069..131137, FT 131156..131209,131219..131287,131402..131470, FT 131585..131653) FT /note="7 probable transmembrane helices predicted for FT BPP2074 by TMHMM2.0 at aa 42-64, 99-121, 136-158, 165-182, FT 186-208, 247-269 and 308-330" FT misc_feature 131297..131527 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.8e-08" FT misc_feature 131300..131386 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 131702..132559 FT /transl_table=11 FT /gene="pstA" FT /gene_synonym="phoT" FT /locus_tag="BPP2075" FT /product="phosphate transport system permease protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1069" FT /db_xref="GOA:Q7W8Q7" FT /db_xref="InterPro:IPR005672" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q7" FT /protein_id="CAE37375.1" FT /translation="MAQSAISMNNGVYRRRHLVNKVMLTISLGALLFGLFWLFWIIATL FT LVKGAPALSFTLFTEITPPPGQAGGLLNAVVGSVLMAGVGTLIGTPVGILAGTYLAEYG FT QRGWLAPATRFLNDVLLSAPSIIIGLFIYAVYVAQVGHYSGWAGALALSILVIPVVVRT FT TDNMLLLVPNSLREATAALGCPKWRMITLVCYRAAKTGIITGVLLAIARISGETAPLLF FT TALSNQFMSLNMNAPMANLPVVIYQYAASPFKDWNNLAWAGATLITLLVLGINILARNL FT FRKS" FT misc_feature 131702..131848 FT /note="Signal peptide predicted for BPP2075 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.767) with cleavage site FT probability 0.395 between residues 49 and 50" FT misc_feature join(131771..131839,131921..131989,132047..132115, FT 132125..132184,132275..132343,132479..132547) FT /note="6 probable transmembrane helices predicted for FT BPP2075 by TMHMM2.0 at aa 24-46, 74-96, 116-138, 142-161, FT 192-214 and 260-282" FT misc_feature 132200..132451 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 1.5e-14" FT misc_feature 132203..132289 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 132556..133380 FT /transl_table=11 FT /gene="pstB" FT /gene_synonym="phoT" FT /locus_tag="BPP2076" FT /product="phosphate transport ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP1068" FT /db_xref="GOA:Q7W8Q6" FT /db_xref="InterPro:IPR005670" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8Q6" FT /protein_id="CAE37376.1" FT /translation="MIAAAGARGAPAIGSKMENTATAPNAKLEVKNLNFYYGKFHAIRN FT VNMSIRENKVTAFIGPSGCGKSTLLRTFNRMFELYPGQRAEGEILLDGENLLTSKTDIS FT LIRAKVGMVFQKPTPFPMSIYDNIAFGVRLFERLSKGEMDERVEWALSKAALWNEVKDK FT LHQSGNSLSGGQQQRLCIARGVAIKPEVLLLDEPCSALDPISTAKIEELIAELKHEYTV FT VIVTHNMQQAARCSDYTAYMYLGELMEYGATDQIFVKPARKETEDYITGRFG" FT misc_feature 132712..133290 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.6e-68" FT misc_feature 132733..132756 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 133066..133110 FT /note="PS00211 ABC transporters family signature." FT tRNA 133421..133497 FT /note="tRNA Pro anticodon TGG, Cove score 87.76" FT CDS complement(133646..134035) FT /transl_table=11 FT /locus_tag="BPP2077" FT /product="Conserved hypothetical protein" FT /note="Similar to Yersinia pestis hypothetical protein FT YPO1817 SWALL:Q8ZFA0 (EMBL:AJ414150) (139 aa) fasta scores: FT E(): 3.4e-12, 42.22% id in 135 aa" FT /db_xref="GOA:Q7W8Q5" FT /db_xref="InterPro:IPR005357" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q5" FT /protein_id="CAE37377.1" FT /translation="MLYPIHVSKDEGSAYGAAFPDFPGCFAAADELQDLPRAAQEAVEA FT HFYGETERIPAPSAPEAWANDEDYQGGYWMMVDIDLSKVNTKAVRLNISLPENLVHRID FT EEAKARRLSRSAFLAMAAEHEMADA" FT misc_feature complement(133652..133777) FT /note="HMMPfam hit to PF01402, Ribbon-helix-helix protein, FT copG family, score 4e-07" FT misc_feature complement(133856..134035) FT /note="HMMPfam hit to PF03681, Uncharacterised protein FT family (UPF0150), score 1.3e-06" FT CDS complement(134058..134240) FT /transl_table=11 FT /locus_tag="BPP2078" FT /product="Conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Pcp27 SWALL:Q93MC0 (EMBL:AP003515) (65 aa) fasta FT scores: E(): 2.7e-12, 55.93% id in 59 aa, and to Rhizobium FT meliloti hypothetical protein R02039 or SMC04441 FT SWALL:Q92K60 (EMBL:AL591789) (62 aa) fasta scores: E(): FT 2.6e-11, 58.33% id in 60 aa" FT /db_xref="InterPro:IPR012933" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q4" FT /protein_id="CAE37378.1" FT /translation="MNSTDLIQQPKADGWYRVHTVGSHHQYKHPTKPGKVTVPHPRKGL FT PTATQRSILKQAGLR" FT CDS 134648..135346 FT /transl_table=11 FT /locus_tag="BPP2079" FT /product="putative exported protein" FT /note="Similar to Pseudomonas aeruginosa hypothetical FT protein PA2264 SWALL:Q9I1K9 (EMBL:AE004652) (238 aa) fasta FT scores: E(): 2.2e-33, 43.27% id in 238 aa, and to FT Campylobacter jejuni putative oxidoreductase subunit CJ0414 FT SWALL:Q9PI91 (EMBL:AL139075) (242 aa) fasta scores: E(): FT 4e-15, 32.39% id in 213 aa" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q3" FT /protein_id="CAE37379.1" FT /translation="MSDSPHSSRREFLLASGASAALTGIALTFHAHAKAAPVQLADYKP FT EYFTPEEWAFVLAATARLIPSEGEGPGALEAHVPIFLDRQLKGEYGSASNWYMQGPHDP FT AASPDRGWQTPLNPAQLYRKAIPAVNALCQLRWSKDFKDLAPEQQDETLTALQKGEAAL FT APELSIFFTTLLANTKEGYFADPMHGGNFGMQSWVYIGFPGARASYAEWVDQHNVKYPL FT GPVSIKGERA" FT misc_feature 134648..134746 FT /note="Signal peptide predicted for BPP2079 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.932 between residues 33 and 34" FT CDS 135350..137119 FT /transl_table=11 FT /locus_tag="BPP2080" FT /product="Putative gluconate dehydrogenase" FT /note="Similar to Pseudomonas aeruginosa gluconate FT dehydrogenase PA2265 SWALL:Q9I1K8 (EMBL:AE004652) (591 aa) FT fasta scores: E(): 8.4e-119, 50.76% id in 591 aa, and to FT Pectobacterium cypripedii dehydrogenase subunit precursor FT SWALL:O34214 (EMBL:U97665) (615 aa) fasta scores: E(): FT 2.6e-116, 50% id in 596 aa" FT /db_xref="GOA:Q7W8Q2" FT /db_xref="InterPro:IPR000172" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q2" FT /protein_id="CAE37380.1" FT /translation="MARTEKKKDVVIVGLGWTGAIAGMELAAEGLEIVALERGRDQNTV FT PEFKYPNQIDELTYGVRLVNMQHPSQQTVTVRRNDAETALPYRSMGSFLPANGVGGAGT FT HWNGLLWRPQPQEIQLRSYVKERWGESIIPEGMNLMDYPVTYDELEPFFTRFDEVAGIS FT GKAGNLKGKIQPGGNPFEGWRSSEYPMPPMPPTYDATKFRDAAQAMGYHPFPAPAGVAS FT TAYVNPYGMQMAPCNFCGFCERFGCYQYSKSSPQTAIFDALKRKPNFSYRTHAEVLRIE FT SSADGKTATGVTYFDAAAQEEVFQPADLVILAAYQLNNVHLLLLSGIGEPYDPATNTGV FT TGKNYAYQMNGGVTMFFKDANFNPFIGHGSNGFCIDDFSVNQNDFGALGFIGGAYWRSG FT TFNGQPIRSMILPAGTPGWGAGWKKAIGQWYGHSMSIGTHGSHMAYRANHLDLDPTYKD FT PHGRPLMRMTFNWQENDLRMNQYMKLKAGEVGKAMKPDLMQLGFKGPGAMYDVRPYQTT FT HNTGGHIMSRDPREGVVNRYCQAWDKHNVFVMGAGNFVQNTQYNPTGMVGALAYWTIHA FT IRTQYLRDPRPLV" FT misc_feature 135350..135430 FT /note="Signal peptide predicted for BPP2080 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.931) with cleavage site FT probability 0.926 between residues 27 and 28" FT CDS 137130..138485 FT /transl_table=11 FT /locus_tag="BPP2081" FT /product="Putative cytochrome C precursor" FT /note="Similar to Gluconobacter oxydans sorbitol FT dehydrogenase cytochrome C subunit SldC SWALL:Q9LBK7 FT (EMBL:AB039821) (478 aa) fasta scores: E(): 3.3e-45, 38.77% FT id in 423 aa, and to Pectobacterium cypripedii cytochrome C FT precursor SWALL:O34215 (EMBL:U97665) (441 aa) fasta scores: FT E(): 3.7e-40, 39.1% id in 422 aa" FT /db_xref="GOA:Q7W8Q1" FT /db_xref="HSSP:1CYJ" FT /db_xref="InterPro:IPR014353" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q1" FT /protein_id="CAE37381.1" FT /translation="MKKALAILGALVALAVLATLALIYVPVKVTPPNEALAADWKAEPG FT RGKYVMRAGDCMACHTANGGSPLAGGRGIPTPMGTIWSSNITPDKETGIGDWTLDQFRA FT ALVDGIGVKEGHLYPAMPYENYRFMSESDIRALYDYLMKEVPPVRNEVQATQLSFPFNL FT RFGLRAWNWLALRGESAFKPASDDKLQTRGQYLVEGAGHCAACHSPRTAFMAQDGTVAR FT DAAFLSGGVLDGWTAPALRGADSAIATWSTAQVADYLATGRNTHATASGEMALAIEHSL FT QYLSDDDLNAMAAFLKGMDGKPVQDIPAQVAMPGPHAVPAAQADEAGQATARLLTAASP FT DMPLGARLYLDNCAGCHFVTGKGAAEIFPQLQGSAVVLGKDAGPLLSIILNGTAVPSTG FT RRPMRLAMQGYADRLSDEEVAVLASFVRSGWGNQASAVTQEEVAAARSAGKH" FT misc_feature 137130..137183 FT /note="Signal peptide predicted for BPP2081 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.492 between residues 18 and 19" FT misc_feature 137142..137210 FT /note="1 probable transmembrane helix predicted for BPP2081 FT by TMHMM2.0 at aa 5-27" FT misc_feature 137253..137564 FT /note="HMMPfam hit to PF00034, Cytochrome c, score 0.26" FT misc_feature 137295..137312 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature 137736..137753 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature 138162..138419 FT /note="HMMPfam hit to PF00034, Cytochrome c, score 0.099" FT CDS complement(138497..139237) FT /transl_table=11 FT /locus_tag="BPP2082" FT /product="Putative carbonic anhydrase precursor" FT /note="Similar, but the N-terminal-signal peptide region, FT to Chlamydomonas reinhardtii carbonic anhydrase precursor FT beta-ca1 SWALL:Q39589 (EMBL:U41189) (267 aa) fasta scores: FT E(): 2e-25, 46.39% id in 194 aa" FT /db_xref="GOA:Q7W8Q0" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q7W8Q0" FT /protein_id="CAE37382.1" FT /translation="MSKKTTPTCNCLQHLLPLDSQEKPVRLSRRKLLSAGLMAGMAGGL FT GIVSPSPAHAQTTLTPEQALEKLRQGNERFARRAITSFQEDLDILQRRTADKQEPFAAV FT LACADSRMPVELVFDQSIGKLFVARVAGNIATPAIIASLEYGAAILGIKALVVLGHVDC FT GAIKAAAANAGAPGQISALYPYIRPAINASSSTDITEMARQNAINQARLLRSASPVLAK FT LSDDGALRILPALYDVADGRVSWL" FT misc_feature complement(138515..139015) FT /note="HMMPfam hit to PF00484, Carbonic anhydrase, score FT 2.8e-07" FT misc_feature complement(139073..139237) FT /note="Signal peptide predicted for BPP2082 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 55 and 56" FT CDS complement(139335..140282) FT /transl_table=11 FT /locus_tag="BPP2083" FT /product="Putative regulatory protein" FT /note="Similar to Pseudomonas aeruginosa probable FT transcriptional regulator PA2206 SWALL:Q9I1R1 FT (EMBL:AE004647) (315 aa) fasta scores: E(): 7.8e-30, 34.51% FT id in 310 aa, and to Azospirillum brasilense FT galactose-binding protein regulator GbpR SWALL:GBPR_AZOBR FT (SWALL:P52661) (342 aa) fasta scores: E(): 4.1e-24, 31.72% FT id in 290 aa" FT /db_xref="GOA:Q7W8P9" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8P9" FT /protein_id="CAE37383.1" FT /translation="MTPPLTSIVSRLHIKHLRLLLAIYEHGSLLGAAKEVAISQPGASK FT ALQEIETTFGAALFVRTNRGLEANDLGLCVVRYARMIYTDLGHLRNELDAIQKGDGGRV FT AVGSIMGAIPLLTDAVSDLMQTHPGMSVEIVEDTSAELLGLLDSGRLDLAICRTVVTKS FT PELYESELLQPEELRVIASIGSPLALADELTLQDLAHCKWIVYRANMPMRILLEREFYD FT AGIRFPTNLLETTSPFATLALLRRNSSFVALASTDVASFFARNGLVSILPFQFTLRSEP FT YELVRRRGSLMSIGARLLKERLLERQDHHVDHVD" FT misc_feature complement(139359..139994) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.1e-32" FT CDS 140448..141587 FT /transl_table=11 FT /gene="gbd" FT /locus_tag="BPP2084" FT /product="NAD-dependent 4-hydroxybutyrate dehydrogenase" FT /EC_number="1.1.1.61" FT /note="Similar to Alcaligenes eutrophus NAD-dependent FT 4-hydroxybutyrate dehydrogenase Gbd SWALL:Q59104 FT (EMBL:L36817) (382 aa) fasta scores: E(): 2.3e-91, 63.42% FT id in 380 aa, and to Ralstonia solanacearum probable FT NAD-dependent 4-hydroxybutyrate dehydrogenase FT oxidoreductase protein Gbd1 or RSC1771 or RS02958 FT SWALL:Q8XYI7 (EMBL:AL646066) (382 aa) fasta scores: E(): FT 3.7e-87, 62.2% id in 381 aa" FT /db_xref="GOA:Q7W8P8" FT /db_xref="HSSP:1O2D" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:Q7W8P8" FT /protein_id="CAE37384.1" FT /translation="MALIQYLTHIQFDFGAVRLLQAECDRIGIKRPMVVTDQGIQAAGI FT LDAALSHLDRPDAVPVFDATPPNPNEEAVRQAVAVYAANDCDGIIALGGGSSIDLAKGV FT AVCATHEGALKRFAVTEGGLGHITAATAPVIAVPTTAGTGSEVGRGAILILDDGRKVGV FT ISPFVVPRTAICDPELTLKLPPALTAATGMDAIAHCLETFMSPLFNPPADGIALDGLAR FT AWRHIERATREPGDRDARMNMMSASMQGALAFQKGLGCVHSLSHALGGIDPRLHHGTLN FT AILLPAVIEFNAPAPTMARENKLNRIAAAIGLADGESVAGAVQGLTARLGLPTSLGQVG FT VARELFARIVDGALKDHSHKTNPRDASAEDYARMLDAAF" FT misc_feature 140469..141560 FT /note="HMMPfam hit to PF00465, Iron-containing alcohol FT dehydrogenase, score 6e-56" FT misc_feature 140964..141050 FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1." FT CDS 141630..143210 FT /transl_table=11 FT /locus_tag="BPP2085" FT /product="Putative ketoglutarate semialdehyde FT dehydrogenase" FT /EC_number="1.2.1.39" FT /note="Similar to Pseudomonas putida ketoglutarate FT semialdehyde dehydrogenase SWALL:Q52019 (EMBL:M69158) (525 FT aa) fasta scores: E(): 7.3e-103, 56.48% id in 524 aa, and FT to Ralstonia solanacearum probable ketoglutarate FT semialdehyde dehydrogenase protein RSP0827 or RS05368 FT SWALL:Q8XRK4 (EMBL:AL646081) (528 aa) fasta scores: E(): FT 1.4e-101, 56.23% id in 521 aa" FT /db_xref="GOA:Q7W8P7" FT /db_xref="HSSP:1EZ0" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q7W8P7" FT /protein_id="CAE37385.1" FT /translation="MTISGAMMIGRSAVAGDGPRLYAFDPNENREIEPAFSSASRGLVD FT AACDLAARAFDRYRGLPLQARAGFLERIAANIERIGDELIQRAHSETGLPRARLEGERA FT RTVGQLRLFAEVVGSGHWLNATLDSPQPDRQPAPRPDLRMARMPVGPVAVFGASNFPLA FT FSVAGGDTASALAAGCPVVVKAHSAHLGTSELVARAVQQAGIECDMPDGVFSLVVGPGA FT EVGASLVAHPAIKAVGFTGSRQGGLALVDVAARRKEPIPVYAEMSSVNPFFVLPGALAR FT RAPALAAGLADSIALGAGQFCTNPGLIVLLDSEAARRFVGELAQALGGKAPQTMLTAGI FT ARAYGAALERRLGEPGVEQVLPPARGPSPCSARPALFAIDAGDFMAAALHHEEIFGPAS FT VVVYCRDRPQLHRLAESLEGQLTSTLHFEDADRDEVGRLLPILEKKAGRLIANGYPTGV FT EVSHAMVHGGPFPSTSNARATSVGASAIDRFLRPVCYQDFPSELVPAALQDGNPLALWR FT LRDGRMQQG" FT misc_feature 141630..141674 FT /note="Signal peptide predicted for BPP2085 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.639) with cleavage site FT probability 0.605 between residues 15 and 16" FT misc_feature 141696..143120 FT /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase FT family, score 9.5e-12" FT misc_feature 142512..142547 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT CDS 143309..143767 FT /transl_table=11 FT /locus_tag="BPP2086" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR013096" FT /db_xref="UniProtKB/TrEMBL:Q7W8P6" FT /protein_id="CAE37386.1" FT /translation="MTASKQNDKQGTATTDDPPPRIMHVDDMEWETIRWPGETGKMLSH FT PTPEDLTLPNAGLLRLEPGAYHPWHRHDFAQVWYILEGEFTIGGVKCGPGTVLQHGDPH FT CEPELHTESGGVMFIVQYPGPTTGGRVIYDKRFNMDKRAAVEAERIDL" FT CDS 143841..144584 FT /transl_table=11 FT /locus_tag="BPP2087" FT /product="Hypothetical protein" FT /note="Low similarity in its N-terminal region to Chlamydia FT trachomatis hypothetical protein CT610 SWALL:O84616 FT (EMBL:AE001331) (231 aa) fasta scores: E(): 5.4e-05, 26.84% FT id in 190 aa" FT /db_xref="InterPro:IPR016084" FT /db_xref="UniProtKB/TrEMBL:Q7W8P5" FT /protein_id="CAE37387.1" FT /translation="MTGLLSKHDFRVALQEAIAGKASAKAAFSQAWMDGTLQRHHFARW FT AENHYHYVGPFADYLGYIYNNARDEQDGVKDLLLQSMYEFRHLQEGEAMVSHTDLLIRF FT AQACGTTRERVESPQACNPITRGMQAWCYATAIRESPVVATAALLVGLASQIPQIYARQ FT IVPLRDPRVYGFSEHEVAFFALRITSDGAHAERGYRIVLDGATTPALQQRCLQFVRWGA FT EMRYAYAQAIYDQYVAPDLGARRVD" FT CDS 144859..145710 FT /transl_table=11 FT /locus_tag="BPP2088" FT /product="Putative branched-chain amino acid transporter FT ATP-binding protein" FT /note="Similar to Agrobacterium tumefaciens ABC FT transporter, nucleotide binding/ATPase protein ATU4124 or FT AGR_L_1459 SWALL:AAL44924 (EMBL:AE009343) (268 aa) fasta FT scores: E(): 2.6e-47, 59.63% id in 270 aa, and to FT Pseudomonas aeruginosa high-affinity branched-chain amino FT acid transport ATP-binding protein BraF or PA1071 FT SWALL:BRAF_PSEAE (SWALL:P21629) (255 aa) fasta scores: E(): FT 9.3e-26, 40.23% id in 251 aa" FT /db_xref="GOA:Q7W8P4" FT /db_xref="HSSP:1G6H" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8P4" FT /protein_id="CAE37388.1" FT /translation="MEHIAKLDETASPANARDGKAHATPAAQAAPAGTHGHVLVAQGLT FT KTFGGFTAVNNVDLRVRAQTIHALIGPNGAGKTTCFNLLSKFLQPSAGRIYYQGSDITR FT AAPEDIAGRGLVRSFQISAIFPKLTLGENVRVALQRKLGTSWHFWKPLASLRVLDEHVD FT RLLESVGLAERRDEPAGLLSYGRKRALELATTLALEPEVLLLDEPMAGMGREDIETVAA FT LIQKVAKGRTVLMVEHNLGVVARLADTITVLCRGEVLAEGAYETVSSNPEVVAAYMGGA FT HA" FT misc_feature 145048..145626 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 6.8e-42" FT misc_feature 145069..145092 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 145703..146407 FT /transl_table=11 FT /locus_tag="BPP2089" FT /product="Putative branched-chain amino acid transporter FT ATP-binding protein" FT /note="Similar to Agrobacterium tumefaciens ABC FT transporter, nucleotide binding/ATPase protein ATU4125 or FT AGR_L_1457 SWALL:AAL44925 (EMBL:AE009343) (233 aa) fasta FT scores: E(): 1.1e-39, 55.89% id in 229 aa, and to FT Pseudomonas aeruginosa high-affinity branched-chain amino FT acid transport ATP-binding protein BraG or PA1070 FT SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): FT 6.6e-25, 43.91% id in 230 aa. Also similar to BPP3336 (237 FT aa) fasta scores: E(): 1.9e-36, 58.009% identity in 231 aa FT overlap" FT /db_xref="GOA:Q7W8P3" FT /db_xref="HSSP:1JI0" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8P3" FT /protein_id="CAE37389.1" FT /translation="MPETHLQIGDLHAQYGESQVLHGMALTVGRGEVVTLLGRNGAGKT FT TTLRAIMGLLARRSGSVRFEARELMGLAPEAIARAGIALCPEERAIFSGLSVQENLMLP FT PVVRAGGMTVPEILALFPNLAERLKSPGTKLSGGEQQMLAIGRILRTGATLLLLDEPSE FT GLAPVIIEQIGLTIRKLKDRGISILLVEQNVNFATCVADRHYVVEHGEVIDAFSNAEIA FT SQSARLSAYLSV" FT misc_feature 145793..146332 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.8e-42" FT misc_feature 145814..145837 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 146105..146149 FT /note="PS00211 ABC transporters family signature." FT CDS 146411..147298 FT /transl_table=11 FT /locus_tag="BPP2090" FT /product="Putative high-affinity branched-chain amino acid FT transporter membrane protein" FT /note="Similar to Brucella melitensis high-affinity FT branched-chain amino acid transport system permease protein FT LivH BMEII0341 SWALL:Q8YD36 (EMBL:AE009671) (295 aa) fasta FT scores: E(): 3.8e-73, 67.24% id in 290 aa, and to FT Agrobacterium tumefaciens ABC transporter, membrane FT spanning protein ATU4126 or AGR_L_1455 SWALL:AAL44926 FT (EMBL:AE009343) (295 aa) fasta scores: E(): 3.5e-70, 67.58% FT id in 290 aa. Also similar to BPP3338 (296 aa) fasta FT scores: E(): 1.4e-64, 65.085% identity in 295 aa overlap" FT /db_xref="GOA:Q7W8P2" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8P2" FT /protein_id="CAE37390.1" FT /translation="MNIESILGIPINAFMGQLLMGLMNGAFYAMLSLGLAIIFGLLNVI FT NFLHGAQFMVGAFIAWMLLAWAGLSYWVALLVAPLVVAIGAVFVERLFLRHLYRLDHLY FT GMLLTFGLMLMVEGLFRKSFGSSGLAYPNVIPGGMNLGFMFLPYYRAWVVAASLLVCQA FT IWLLIEKTRLGSYLRAATENPDMVRAFGIKVPVLLTLTYAFGAGLAGLAGVMAAPIYQV FT SPLMGSNLVILVFAVVVIGGMGSILGSILTGFSLGAIEGLTKLFYPQASATVIFLVMII FT VLLIKPTGLFGKAK" FT misc_feature 146450..147292 FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 1.4e-30" FT misc_feature join(146468..146536,146540..146608,146618..146677, FT 146714..146773,146846..146914,146990..147058, FT 147101..147169,147206..147265) FT /note="8 probable transmembrane helices predicted for FT BPP2090 by TMHMM2.0 at aa 20-42, 44-66, 70-89, 102-121, FT 146-168, 194-216, 231-253 and 266-285" FT CDS 147306..148319 FT /transl_table=11 FT /locus_tag="BPP2091" FT /product="Putative branched-chain amino acid transporter FT membrane protein" FT /note="Similar to Rhizobium meliloti putative permease ABC FT transporter protein R02976 or SMC03117 SWALL:Q92LQ4 FT (EMBL:AL591792) (330 aa) fasta scores: E(): 1.3e-64, 59.18% FT id in 294 aa, and to Brucella melitensis high-affinity FT branched-chain amino acid transport system permease protein FT LivM BMEII0340 SWALL:Q8YD37 (EMBL:AE009671) (331 aa) fasta FT scores: E(): 1.7e-61, 55.1% id in 294 aa. Also similar to FT BPP3339 (324 aa) fasta scores: E(): 2.5e-48, 52.336% FT identityin 321 aa overlap" FT /db_xref="GOA:Q7W8P1" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8P1" FT /protein_id="CAE37391.1" FT /translation="MKNHTSSMLRPMLVLLACAMVAPAIVYPIFLMKVMCFAIFACAVN FT LLVGYAGLLSLGHSMFFGMSAYITAHTLKVWGWPFEAALPAAVLACSALGLIAGAIAIR FT RQGIYFAMITLALAQMVYFFCLQAPFTGGEDGLQNVPRPVVLGLFDTADDWKLYVVVLA FT IFLAAVAVYHRAIHSPFGEVAKAIRDNEPRAISLGYTVNRYKLLAFVISAALTGLAGGT FT KALVFQLASLTDVGWHISTEVVLMVLVGGMGTIIGPLVGAVLILAMQYYLAPLGEWVMV FT IQGAVLVTVVMIFRRGLVGEFEAWRVRMASMPGKPALPPRHAPGSFVVHSDAWSGK" FT misc_feature 147306..147428 FT /note="Signal peptide predicted for BPP2091 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.430 between residues 41 and 42" FT misc_feature join(147333..147401,147420..147488,147546..147614, FT 147627..147695,147774..147833,147921..147989, FT 148032..148100,148119..148187) FT /note="8 probable transmembrane helices predicted for FT BPP2091 by TMHMM2.0 at aa 10-32, 39-61, 81-103, 108-130, FT 157-176, 206-228, 243-265 and 272-294" FT misc_feature 147369..148214 FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 2.6e-08" FT CDS 148427..149629 FT /transl_table=11 FT /locus_tag="BPP2092" FT /product="Putative branched-chain amino acid transporter FT substrate binding protein" FT /note="Similar to Agrobacterium tumefaciens ABC FT transporter, substrate binding protein ATU4123 or FT AGR_L_1462 SWALL:AAL44923 (EMBL:AE009343) (402 aa) fasta FT scores: E(): 1e-74, 52.38% id in 399 aa, and to Brucella FT melitensis branched-chain amino acid ABC transporter, FT periplasmic amino acid-binding protein BMEII0344 FT SWALL:Q8YD33 (EMBL:AE009671) (401 aa) fasta scores: E(): FT 2.4e-72, 50.87% id in 399 aa" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q7W8P0" FT /protein_id="CAE37392.1" FT /translation="MKSAAALALLAGALCTAPAGAQVSGDVVKIGILNDQSGLYADLAG FT AGSVQAARMAIEEFGGQVLGKKIELVWADHQNKADIGAGIARAWFDREGVDAIADFSNS FT SVGFAVQGLANERKKITLVAAGSSDFTGKACSPFSTQWVYNSYSNGYGLARLLASRGMD FT SVFLLTVDYTFGHAFANDVRKAVTENGGKVLGEVRFPLNSFDLSSYLLQAQASKAKLIV FT TAAAGSDMTSTVKQANEFGITPGQALAAPAVFITDVNSMGLQAAQGLQFVTAFYWDRTP FT DSRAWAEKFFARQKAMPSMTQAGVYSAVRHYLKAVEAAKTDDAVAVAAKMRELPVRDMN FT IENGRVREDGQVMHDMYLVEVKKPDESRRAWDYYKVLTTVPADQAFQALADSACPLVGK FT Q" FT misc_feature 148427..148489 FT /note="Signal peptide predicted for BPP2092 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.989 between residues 21 and 22" FT CDS complement(149654..150376) FT /transl_table=11 FT /locus_tag="BPP2093" FT /product="Putative high-affinity branched-chain amino acid FT transporter ATP-binding protein" FT /note="Similar to Brucella melitensis high-affinity FT branched-chain amino acid transport ATP-binding protein FT LivF BMEII0098 SWALL:Q8YDS7 (EMBL:AE009648) (242 aa) fasta FT scores: E(): 7.9e-46, 65.81% id in 234 aa, and to FT Pseudomonas aeruginosa high-affinity branched-chain amino FT acid transport ATP-binding protein BraG or PA1070 FT SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): FT 1.1e-31, 49.35% id in 233 aa, and to Salmonella typhimurium FT high-affinity branched-chain amino acid transport FT ATP-binding protein LivF or LivG or STM3560 or STY4252 FT SWALL:LIVF_SALTY (SWALL:P30294) (237 aa) fasta scores: E(): FT 1.5e-29, 47.21% id in 233 aa. Also similar to BPP0565 (245 FT aa) fasta scores: E(): 8.2e-32, 51.709% identity in 234 aa FT overlap" FT /db_xref="GOA:Q7W8N9" FT /db_xref="HSSP:1JI0" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8N9" FT /protein_id="CAE37393.1" FT /translation="MNDTAAPLLTVEGLSAGYGELPVLHDVSLEVRRTEIVALVGSNGA FT GKTTLLRALSRVLPCTGSIVMNGRQLSLASPDQAFAGGMVQVPEGRQLFDRMTVQDNLL FT MGAYRRTARADIARDLDKVYGLFPRLAQRRGQLAGSMSGGEQQMCAMARALMAAPVLMM FT IDEMSLGLAPVVVDQLMAMLADIRREGVTTLLVEQDIHLALSSADRGYVMETGRIVHSG FT PASALLTDPKVRQAYLGI" FT misc_feature complement(149729..150277) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.8e-32" FT misc_feature complement(150233..150256) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(150373..151107) FT /transl_table=11 FT /locus_tag="BPP2094" FT /product="Putative branched-chain amino acid transporter FT ATP-binding protein" FT /note="Similar to Pyrobaculum aerophilum branched-chain FT amino acid transport ATP-binding protein PAE1389 FT SWALL:Q8ZX95 (EMBL:AE009819) (245 aa) fasta scores: E(): FT 1.9e-29, 45% id in 240 aa, and to Archaeoglobus fulgidus FT probable branched-chain amino acid transport ATP-binding FT protein LivG or AF1390 SWALL:LIVG_ARCFU (SWALL:O28881) (257 FT aa) fasta scores: E(): 1e-17, 31.83% id in 245 aa" FT /db_xref="GOA:Q7W8N8" FT /db_xref="HSSP:1G6H" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8N8" FT /protein_id="CAE37394.1" FT /translation="MTAILEIRNVTRRFAGLVAVNQVSFTLAEGEILGLIGPNGAGKTT FT LVSLISGTLAPTHGEILYQGKPIGALPAYRRARLGIGRTFQIMRPFPGLSVLDNVAVGA FT LFGRGGAQPDLAKAREQARACLDFVGLGRAAGQRAEELGGPGRKRLELTKALAMQPRVL FT LCDEVMAGLNLVEIDEVIDVIRKVRATGISVLVIEHVIKAIKSLSDRLLVLHHGEKIAD FT GDPGEVLADAEVVQAYLGRRRT" FT misc_feature complement(150457..151020) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 6.6e-43" FT misc_feature complement(150976..150999) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(151104..152051) FT /transl_table=11 FT /locus_tag="BPP2095" FT /product="Putative high-affinity branched-chain amino acid FT transporter membrane protein" FT /note="Similar to Brucella melitensis high-affinity FT branched-chain amino acid transport system permease protein FT LivM BMEII0101 SWALL:Q8YDS4 (EMBL:AE009648) (315 aa) fasta FT scores: E(): 4.9e-72, 65.19% id in 316 aa, and to FT Deinococcus radiodurans branched-chain amino acid ABC FT transporter, permease protein DR2120 SWALL:Q9RSK4 FT (EMBL:AE002047) (310 aa) fasta scores: E(): 2.4e-19, 33.22% FT id in 301 aa" FT /db_xref="GOA:Q7W8N7" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8N7" FT /protein_id="CAE37395.1" FT /translation="MKAWRAILALAAVAALAGLPWYGSDVMVQFGINTLLLAVLAQGWN FT IIGGYTGYASFGNSVFYGLGSYGVAIAMVQWELPFAAGLVFGVALALAFALLLGMPVLR FT LRGHYFAIATLALAQVMTAIVSNIELAGQNIGLVLPPLNNDPLFYELSLALLALATLAV FT AWLTRSRFGFGLIAIRENEEGAAVMGVNTTLYKVAAFALSGVFSALAGGIHAYWITFLD FT PESAFDIGLNVKMIIMAVFGGAGTVLGPVVGAFSLSAISELLSSEITSAAGLFFGVVIV FT AAVVLMPRGLSDLLRRYRKSGWRYFIENVRAHKL" FT misc_feature complement(151128..151985) FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 4.7e-12" FT misc_feature complement(join(151194..151259,151281..151346, FT 151392..151457,151554..151610,151656..151721, FT 151743..151808,151824..151889,151911..151967, FT 151980..152030)) FT /note="9 probable transmembrane helices predicted for FT BPP2095 by TMHMM2.0 at aa 7-24, 28-47, 54-76, 81-103, FT 110-132, 147-166, 198-220, 235-257 and 264-286" FT misc_feature complement(152001..152051) FT /note="Signal peptide predicted for BPP2095 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.797 between residues 17 and 18" FT CDS complement(152048..152911) FT /transl_table=11 FT /locus_tag="BPP2096" FT /product="Putative high-affinity branched-chain amino acid FT transporter membrane protein" FT /note="Similar to Brucella melitensis high-affinity FT branched-chain amino acid transport system permease protein FT LivH BMEII0102 SWALL:Q8YDS3 (EMBL:AE009648) (287 aa) fasta FT scores: E(): 1.3e-69, 64.45% id in 287 aa" FT /db_xref="GOA:Q7W8N6" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8N6" FT /protein_id="CAE37396.1" FT /translation="MDLLAQILVNGILLGGLYAVMAQGLALVWGVLNIVNLAHGAFIML FT GAYVSWYLYTDLGVDPFLGLPVTAAVLFVLGYVLQRGLLNLVVRAPMFNTLLITFGLEV FT VLTYLAQLAFSADFRTINPPYAGDSYVLGPVTLPVARLAAFGVALALTLGMWLFLLHSR FT LGRAIRATAQNLIAARLYGVEPRHLYAVTFGLGLALAGAAGGLYGTVSQINPYIGATLT FT AKCFAISIIGGLDNPLGVMVGGLFLGIVESLTTLYVGPTFADVASFGILVLVLFLRPSG FT LLGRAA" FT misc_feature complement(152054..152902) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 7.3e-35" FT misc_feature complement(join(152081..152146,152168..152233, FT 152279..152344,152432..152497,152570..152635, FT 152675..152740,152825..152890)) FT /note="7 probable transmembrane helices predicted for FT BPP2096 by TMHMM2.0 at aa 7-29, 57-79, 92-114, 138-160, FT 189-211, 226-248 and 255-277" FT CDS complement(152939..154147) FT /transl_table=11 FT /locus_tag="BPP2097" FT /product="Putative branched-chain amino acid transporter FT substrate-binding protein" FT /note="Similar to Brucella melitensis Leu/Ile/Val-binding FT protein precursor BMEII0103 SWALL:Q8YDS2 (EMBL:AE009648) FT (415 aa) fasta scores: E(): 5.2e-109, 71.32% id in 401 aa, FT and to Escherichia coli leucine-specific binding protein FT precursor LivK or B3458 SWALL:LIVK_ECOLI (SWALL:P04816) FT (369 aa) fasta scores: E(): 6.4e-12, 23.81% id in 357 aa" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q7W8N5" FT /protein_id="CAE37397.1" FT /translation="MSRKLMRALPALAFVMCTGASAAAPAPTVLLGASIQLTGPVANTG FT RYYRDAYQIAVDQINAAGGVKIGGVPHKLALKIYDNQSDVNLSVRQYTQLVTQDKVNLL FT LGPFASNFALADSAVSEKYKVPMVQGGGASDQIFARKFKYIFGTLAPASNYFGSTVDML FT KALKPAPASVALLYADDAFDVSVAQGTRPLLKSAGLNVAMDERYSTNATDFNSLLSQIK FT SRKVDAVLVAGHETEILNFVRQAKSLAVAPKMYSFTVGVPSEDFRKALGADADYAFGMT FT AWLPSAALKDRWFGDAEQFARAYKAKYGYDPDYHAASGVADVEALAHAMESAGSLDPQK FT VRDALARSRFDSLYGPISFNAQGQIDLPQVVIQVQGDKLAEVYGAKGFITPPKYPMPAW FT DAR" FT misc_feature complement(154079..154147) FT /note="Signal peptide predicted for BPP2097 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.672 between residues 23 and 24" FT CDS 154371..155750 FT /transl_table=11 FT /locus_tag="BPP2098" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q7W8N4" FT /db_xref="InterPro:IPR005656" FT /db_xref="UniProtKB/TrEMBL:Q7W8N4" FT /protein_id="CAE37398.1" FT /translation="MPTSAISASPDLAEQYAAWACALRYADAPRDVRQALRNCLLYNLA FT MALAVDPADDPLGDTLGAVARQAGAARLFGGRGARSAQDAAFINAALVTARGQNDTHPD FT VVAHIGCIVIPAVLALADEEQAAWPDVLDALLAGYELIPRLARGMAEATSRRGLRATPL FT YGVLGAAVACARLLRLPVPRAAAALSIATQYACGTMQPWVDGSQEWRLQVAKASRDAVS FT AALLARAGLQGARRALEGDSGFARAYAGGAAGPADFSGWRLPEMAFKPYPGCAFNQAPV FT HALRELLRRTGIDPGQVAALEVAMHPFDAGYPGIDAYGPFPSPSGAIMSAPFMLAATLQ FT DGQPGMAHFGRDYADGPLHARSARVRIRACETVARWACRVVATLEDGTRHEGACDGGFV FT LDWAQTVALGRAVSREWPGAGQPRRYAALARAVEDLEASARAGWPVLQAAAYDQAVNDH FT A" FT CDS 155747..156532 FT /transl_table=11 FT /locus_tag="BPP2099" FT /product="Putative transcriptional regulator" FT /note="Similar to Agrobacterium tumefaciens transcriptional FT regulator, IclR family ATU4824 or AGR_L_119 SWALL:AAL45618 FT (EMBL:AE009411) (288 aa) fasta scores: E(): 1.3e-23, 35.88% FT id in 248 aa, and to Rhizobium meliloti putative FT transcription regulator protein R01691 or SMC00263 FT SWALL:Q92PP5 (EMBL:AL591788) (282 aa) fasta scores: E(): FT 4.3e-21, 33.87% id in 248 aa" FT /db_xref="GOA:Q7W8N3" FT /db_xref="InterPro:IPR014757" FT /db_xref="UniProtKB/TrEMBL:Q7W8N3" FT /protein_id="CAE37399.1" FT /translation="MNPMTATMKGAQAVSRALSLLRHISHSHPHGIGIAELAIAAQLDR FT ITAYRLASSLVEFGLVERDPARNYRLGVEAMQLGLAAMRSAPVVERLRPIIRRLARRTE FT DTVFLVVRNGDYGHCLHSEEGSYPVKALVLQVGGMRVLGIGSAGSTLLANLPDDEIAAL FT YQRHQDEFDPRGLSLGKLRRLVQQTRRRGYADTADLVADGVSGVGMRFEFASGSQAALS FT VAAIRSRMPPERKAWIAQLIAEELQLGDFIPSYLQGVST" FT misc_feature 155951..156499 FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator, score 6e-08" FT CDS 156664..157413 FT /transl_table=11 FT /locus_tag="BPP2100" FT /product="Putative short chain dehydrogenase" FT /note="Similar to Bacillus halodurans FT 3-oxoacyl-[acyl-carrier protein] reductase FabG or BH2491 FT SWALL:Q9KA03 (EMBL:AP001515) (246 aa) fasta scores: E(): FT 2.8e-31, 43.03% id in 244 aa, and to Escherichia coli FT 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 FT SWALL:FABG_ECOLI (SWALL:P25716) (244 aa) fasta scores: E(): FT 1.9e-28, 41.2% id in 250 aa" FT /db_xref="GOA:Q7W8N2" FT /db_xref="HSSP:1Q7B" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W8N2" FT /protein_id="CAE37400.1" FT /translation="MELGIRNQVAFVTGAGNGIGWACAQVLAREGCRVVVADIDAHAAG FT RAAQAIEQAGGSALALTLDVGRPQAVRDAVATVLAHWGAIEILLNNAGFSRDSAIGAMS FT DAQWTDVLTVNLSGAFHCIREIAPHMVARKFGRIVNMASRAHFGDINKANYSAAKAGVI FT GMTKALALELGEHGITVNAVAPGIIQTARVRNLPQFAGIESRSLGAMPIKRIGRPEEVA FT DAVAFLASARAAFITGEVLHISGGRYG" FT misc_feature 156679..157404 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 2.8e-80" FT misc_feature 157087..157173 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 157480..158454 FT /transl_table=11 FT /locus_tag="BPP2101" FT /product="putative exported protein" FT /note="Similar to Agrobacterium tumefaciens hypothetical FT protein ATU4727 or AGR_L_312 SWALL:AAL45521 (EMBL:AE009401) FT (329 aa) fasta scores: E(): 1.2e-40, 40.76% id in 314 aa, FT and to Rhizobium meliloti hypothetical protein RA1058 or FT SMA1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: FT E(): 3.6e-40, 40.72% id in 302 aa" FT /db_xref="GOA:Q7W8N1" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W8N1" FT /protein_id="CAE37401.1" FT /translation="MIKPLGLFAGAIALLLGASAAHAEPWPQSRQPIRLVIPFAPGGTT FT DILGRMMAEGLSRELKVSVIAENIAGANGNLGAQTVARAKPDGNTLMLGTPGPMIVNKY FT VYKNLAFDPKTAFAPVALVAELPNVLMVRPDLGVDDVAGLVGLARKEKDGLTFGSPSVG FT SSGHVSTELFKLQAGVSAVHVPYKGSSPMLVDLMSGNTDFTIDQISSAIGFIQGGKIKA FT LAVTSRTRSAQLPDVPTLREAGFPDYEVSVWFCVAAPAGTPEDRIQALNAALNKVLAEP FT AVRERLASLGAQPLGGPAQDLARQILTEEKNIQAVTKVVSFDN" FT misc_feature 157480..157548 FT /note="Signal peptide predicted for BPP2101 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 1.000 between residues 23 and 24" FT misc_feature 157621..158445 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.4e-89" FT CDS 158506..159354 FT /transl_table=11 FT /locus_tag="BPP2102" FT /product="Putative hydrolase" FT /note="Low similarity to Streptomyces coelicolor hydrolase FT SC7H1.13 SWALL:O54172 (EMBL:AL021411) (261 aa) fasta FT scores: E(): 3.3e-08, 30% id in 260 aa" FT /db_xref="GOA:Q7W8N0" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q7W8N0" FT /protein_id="CAE37402.1" FT /translation="MILMKDVRTDSVSAGGFRVVYHDCAPQADDAKTVVLLHGTGGSAE FT NNFWALFPMLAMRHRVVALDFVDPDGSGVPDARAYVEQALAVVETVSRGRAVHLVGYSF FT GAVIGALLAARHGRWVESLTLVAGWLKTDAQQRLRNAVWRGLYESGHEALAPFSVFTSF FT SQAFLNTRNEAELEALIQGVRNGPDRSRKMAFNRDVDIGDEVAGIAAPSLVIGCTHDQM FT APVRHSRLLFGSIQDCRYAEINAGHGVVHERPSELFTMIDAFVREPQAWPAGHIVQNSH FT A" FT misc_feature 158680..159300 FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold, FT score 2e-05" FT misc_feature 158794..158823 FT /note="PS00120 Lipases, serine active site." FT CDS 159371..160885 FT /transl_table=11 FT /locus_tag="BPP2103" FT /product="Putative monoxygenase" FT /note="Similar to Streptomyces coelicolor monooxygenase FT SCE87.23c SWALL:Q9RKB5 (EMBL:AL132674) (519 aa) fasta FT scores: E(): 1e-86, 46.03% id in 504 aa, and to Pseudomonas FT fluorescens cyclohexanone monooxygenase homolog FT SWALL:AAC36351 (EMBL:AF090329) (512 aa) fasta scores: E(): FT 1.2e-84, 46.37% id in 483 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W8M9" FT /protein_id="CAE37403.1" FT /translation="MKEHDAAQGGTRTETEVLLIGTGFSGLGMAVALKREGRRDFIVLE FT RAGDVGGTWRDNHYPGAACDIQSHLYSYSFRPNPRWSRVYAPQPEILQYLRDTARDEGI FT LDHVRFGANVVRAAWDAAQAAWLVDTTAGRFKAQVLISAAGHLSDPSFPDIEGLASFRG FT AVFHSANWDHSYDLAGKRIGVIGTGASAIQIVPELARDAGQLTVFQRSAPYVIPRRDHV FT YSEAEKGLFARFPEAAQELRDELFWGNESRFPQRRQVPAFIEQVTAMALSHLRKQVPDE FT ALRAQLTPHYAIGCKRVLISNDYYPALQQPNVALETAGIARIDEQGVVLKSGGRVDLDL FT LVVATGFEAAELPIAERIHGRQGRRLSDQWRAGGQAFACTAVSGFPNFFLMLGPNTGLG FT AGSMIFMVETQINYIKGAVAFIFEHGAIVDPDPDAQRDYVESIYRRSAGTVWLDGGCSS FT WYLHPQSGKLTTLWPDFMTQFRKENGTFSRQGYQVALRAPHAAEQA" FT misc_feature 159419..160879 FT /note="HMMPfam hit to PF00743, Flavin-binding FT monooxygenase-like, score 1.7e-18" FT CDS 160882..161790 FT /transl_table=11 FT /locus_tag="BPP2104" FT /product="Putative 3-hydroxybutyryl-CoA dehydrogenase" FT /note="Similar to Mycobacterium tuberculosis putative FT 3-hydroxybutyryl-CoA dehydrogenase FadB3 or Rv1715 or FT MTV048.02 or MT1754 SWALL:O53928 (EMBL:AL022003) (304 aa) FT fasta scores: E(): 8e-46, 51.71% id in 292 aa, and to FT Bacillus subtilis probable 3-hydroxybutyryl-CoA FT dehydrogenase MmgB SWALL:HBD_BACSU (SWALL:P45856) (287 aa) FT fasta scores: E(): 2.2e-23, 39.08% id in 284 aa" FT /db_xref="GOA:Q7W8M8" FT /db_xref="HSSP:1F0Y" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W8M8" FT /protein_id="CAE37404.1" FT /translation="MSGAAETRIAVVGAGLMGHGIAQAFMVAGFPVSIWDPAEAARASA FT PQRIAAHLALLGMERPVTVRVCDTLASCVAGSQLVIEAVPEKLELKRELLAVLDELNPD FT AIVATNTSVLRITEIAADSARPERVVGTHWWNPPYLIPVVEVVRGERTGEDVARRVSVW FT LAQAGKTPVDVYRDVPGFVGNRMQFALLREAAWLVEEGVCSAETADLVARMTFGRRWAC FT VGPLRNADFIGLDLTCDILDYLAPSLSDCKQAPRLLRDKVAVRQLGAKSGQGVFEWEEG FT ERDETEAQLLRHLIAAAGKPG" FT misc_feature 160888..161415 FT /note="HMMPfam hit to PF02737, 3-hydroxyacyl-CoA FT dehydrogenase, NAD binding domain, score 2.3e-33" FT misc_feature 161410..161484 FT /note="PS00067 3-hydroxyacyl-CoA dehydrogenase signature." FT misc_feature 161419..161715 FT /note="HMMPfam hit to PF00725, 3-hydroxyacyl-CoA FT dehydrogenase, C-terminal domain, score 6.8e-14" FT CDS 162226..162993 FT /transl_table=11 FT /locus_tag="BPP2105" FT /product="Putative enoyl-CoA hydratase" FT /note="Similar to Acinetobacter spSE19 enoyl CoA FT dehydratase FadB or ORF14 SWALL:Q9F7E7 (EMBL:AF282240) (258 FT aa) fasta scores: E(): 5.6e-20, 33.86% id in 251 aa, and to FT Mycobacterium tuberculosis probable enoyl-CoA hydratase FT EchA8 or Rv1070c or MT1100 or MTV017.23c SWALL:ECH8_MYCTU FT (SWALL:O53418) (257 aa) fasta scores: E(): 5.1e-19, 32.66% FT id in 251 aa" FT /db_xref="GOA:Q7W8M7" FT /db_xref="HSSP:1HZD" FT /db_xref="InterPro:IPR001753" FT /db_xref="UniProtKB/TrEMBL:Q7W8M7" FT /protein_id="CAE37405.1" FT /translation="MAIKVSQPDNGVVTLLMDRPAKHNAFTWEMYEAFGAACDALQADD FT SVRCVIVRGAGGAFCAGSDIGGFDENRSGVEQARAYAAFTLAMFDKFKHLRHPTIACIE FT GVCVGGGLEIAALCDIRIAQADARFGIPVNRIGLTLDHQELADLVAVVGHGVALEILLE FT GRVFGAQEALAKGLLSRVVDDAWSDADETARRIARLAPLSNRWHKQFIRQLQSGQLLTQ FT AQRDEAYACFDTQDYQIGSRAFLEKQRPQFIGR" FT misc_feature 162262..162774 FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family, score 2.2e-35" FT CDS 163031..164233 FT /transl_table=11 FT /locus_tag="BPP2106" FT /product="Putative L-carnitine dehydrogenase-like protein" FT /note="Similar to Ralstonia solanacearum putative FT transmembrane protein RSC0796 or RS05041 SWALL:Q8Y194 FT (EMBL:AL646061) (420 aa) fasta scores: E(): 1.1e-61, 41.04% FT id in 402 aa, and to Acinetobacter spNCIMB9871 L-carnitine FT dehydrogenase-like protein ORF17 SWALL:Q93RL7 FT (EMBL:AB026669) (405 aa) fasta scores: E(): 2.3e-60, 41.14% FT id in 401 aa" FT /db_xref="GOA:Q7W8M6" FT /db_xref="HSSP:1PQY" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q7W8M6" FT /protein_id="CAE37406.1" FT /translation="MTSDAATPLAGLKVLDLSQIMAGPYCTMVLADLGADVIKIEKPAG FT GDDSRQMGPYVKGESTCFAQINRNKRGVVLDLKDPQARDAVYELAKWADVVVENYRVGV FT TARLGVDYDTLSKINPRLVYCSISGFGQTGPYARHGGFDLVAQGLSGIMSMTGEPNGRP FT LKSGIAVYDVGAGITAAYAILAAYVNQLKTGKGQHIDIGLAECGLPWFVWEAAAYFAEG FT TVPQATGSRHRVDAPYQAIKTGDGYMVLGCANQRTWEKLCKEVLFRPELTEDARFLTNM FT DRLANIDMLEPLLEASFASAGTQEWIRRCNEAGVPCGPINNFKQAVEDPHYRAREMVAS FT LDHPVIGQMNVIGIPTKFSRTPGSLRKAAPLFGQDTDEVLRGIGLSDETIEQLKAQGAA FT A" FT misc_feature 163247..163813 FT /note="HMMPfam hit to PF02515, CAIB/BAIF family, score FT 2.1e-70" FT CDS 164320..165558 FT /transl_table=11 FT /locus_tag="BPP2107" FT /product="Putative ABC transport system, solute-binding FT protein" FT /note="Similar to Rhizobium loti ABC transporter, amino FT acid-binding protein MLR7182 SWALL:Q986W4 (EMBL:AP003011) FT (419 aa) fasta scores: E(): 4.7e-22, 26.55% id in 403 aa, FT and to Pseudomonas aeruginosa leucine-, isoleucine-, FT valine-, threonine-, and alanine-binding protein precursor FT BraC or PA1074 SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) FT fasta scores: E(): 2e-11, 25.64% id in 386 aa" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q7W8M5" FT /protein_id="CAE37407.1" FT /translation="MTTSINASRRHFSQAMMALAAMGAAGPVFSQGRPAPFKVGALNSI FT TGAGGTYGPGMLEAIKIGIAEVNAAGGAAGRELKLYAEDDQTRPDAAVLAARKLVDIQH FT VDAMIGIWSSAVQLATLPITNAAGILSFNTCGAPEIRTEDKRDLVFQFYASNAIIGAAF FT AAIGQRLGYKRAAVLGYNNATMSVQANHFKAAWEKKGNQIVSSAIYEPNQATYRTEVEK FT AVAAKPDVIVLSSYTPDATILLKEWYQTGYECKFIMPGYSATPALIKALGPDVMRNIVS FT TANVPASDNQAYKAFVEKFQAVTKSPPEMFAAAAYDMVITLALAIEAAGPDAKPADLSA FT LVRQVSNPPGQKVSSFVQGRDLLRQKAKIDFDGASSSLDFDANGDTVPDFGIYEFDGKA FT FALKDVVPGATLM" FT misc_feature 164320..164409 FT /note="Signal peptide predicted for BPP2107 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.969 between residues 30 and 31" FT CDS 165596..166471 FT /transl_table=11 FT /locus_tag="BPP2108" FT /product="Putative ABC transport system, permease protein" FT /note="Similar to Synechocystis sp high-affinity FT branched-chain amino acid transport permease protein LivH FT or SLR0949 SWALL:P74318 (EMBL:D90914) (286 aa) fasta FT scores: E(): 1.3e-30, 37.58% id in 282 aa, and to FT Pseudomonas aeruginosa high-affinity branched-chain amino FT acid transport system permease protein BraD or PA1073 FT SWALL:BRAD_PSEAE (SWALL:P21627) (307 aa) fasta scores: E(): FT 4.3e-12, 29.86% id in 298 aa" FT /db_xref="GOA:Q7W8M4" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8M4" FT /protein_id="CAE37408.1" FT /translation="MDTVLFANAIINGVIVGLLLALPALAITLVFGIARFPNAAAGDYM FT TFGAYATVAAQAFMGASLVGSAIVATLATGLLSLFFYFWVFRKLAQRSLVARLIASIGI FT AFAVRAAITFFAGHGQYTIQAPLQRAWNFGGIRILPLDVYILLAALLALAFMFGLLYLS FT PTGRRMRAVSDNPQLAAVGGIGVRKVMVILWGIVGVFSGLGGVLLGIKATVLPELGWEL FT LLPMFAAVILGGVGSPVGAVLGMIVFGIAQEVATLYIGSAYKIVIAFLVLLVVLLFRPQ FT GIMDRVQAVR" FT misc_feature 165596..165673 FT /note="Signal peptide predicted for BPP2108 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.919) with cleavage site FT probability 0.645 between residues 26 and 27" FT misc_feature 165611..166459 FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 5.6e-27" FT misc_feature join(165632..165700,165785..165853,165872..165940, FT 166016..166084,166166..166234,166277..166345, FT 166364..166432) FT /note="7 probable transmembrane helices predicted for FT BPP2108 by TMHMM2.0 at aa 13-35, 64-86, 93-115, 141-163, FT 191-213, 228-250 and 257-279" FT CDS 166472..167371 FT /transl_table=11 FT /locus_tag="BPP2109" FT /product="Putative ABC transport system, permease protein" FT /note="Similar to Rhizobium loti ABC transporter, permease FT protein MLL7174 SWALL:Q986X3 (EMBL:AP003011) (327 aa) fasta FT scores: E(): 4.4e-29, 39.93% id in 298 aa, and to FT Archaeoglobus fulgidus branched-chain amino acid ABC FT transporter, permease protein AF0824 SWALL:O29434 FT (EMBL:AE001047) (323 aa) fasta scores: E(): 3.6e-19, 32.65% FT id in 297 aa" FT /db_xref="GOA:Q7W8M3" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8M3" FT /protein_id="CAE37409.1" FT /translation="MMEAYLIAIFITVLIYMLLAGGLALQYGFTGLINFGHVGFYAIGA FT YTSALLSLQGGPLVACILAATLVSGLSAYPLGVIALRLRGDYLAIVTLGFSESVRMILQ FT KEEWLTRGVHGIPGIPRLFGQYASGAMVDVLILATLLLTNILVFLGIRKIIGSPFGRTI FT KAIRDNEVAVMALGKNPAWFKTRSLMIGAALAGLAGAFTAHYLTFIAPEQFVPLITFYV FT WIAIIVGGVGSLKGVVAGTVILMVFLEGSRFVREFLFFDISEVQMASLRFFIIGVGLIL FT CILYRPNGIFGSASAEGK" FT misc_feature 166475..167356 FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 2.4e-31" FT misc_feature join(166484..166552,166562..166630,166643..166711, FT 166856..166924,167033..167101,167144..167212, FT 167273..167341) FT /note="7 probable transmembrane helices predicted for FT BPP2109 by TMHMM2.0 at aa 5-27, 31-53, 58-80, 129-151, FT 188-210, 225-247 and 268-290" FT CDS 167374..168135 FT /transl_table=11 FT /locus_tag="BPP2110" FT /product="Putative ABC transport system, ATP-binding FT protein" FT /note="Similar to Rhizobium loti ABC transporter, FT ATP-binding protein MLL7176 SWALL:Q986X0 (EMBL:AP003011) FT (266 aa) fasta scores: E(): 3.3e-30, 45.38% id in 249 aa, FT and to Pseudomonas aeruginosa high-affinity branched-chain FT amino acid transport ATP-binding protein BraF or PA1071 FT SWALL:BRAF_PSEAE (SWALL:P21629) (255 aa) fasta scores: E(): FT 6.3e-22, 36.94% id in 249 aa" FT /db_xref="GOA:Q7W8M2" FT /db_xref="HSSP:1G6H" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8M2" FT /protein_id="CAE37410.1" FT /translation="MAQLSVQNIRAGFAGLLALDDVSIAVEKGERVGLIGTNGAGKSTL FT FSVIGGYVPAQGGRVHFDGQDISQFGVQRRVNLGLARTFQVPREFGQLSVLENMMAAAP FT DQRGEHLGTLFLSPGRVRRQEAEIRERAQDLLEFLNLAKVANVLAGKLSGGQKKLLELG FT RLLMMKPGFIMLDEPFAGVNPVLVDELSRRIVELNEQGITVLIIEHNLQALSELVPRMY FT IMDRGKVLCEGTPEHVLADERVREAYMGGTV" FT misc_feature 167458..168054 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.1e-47" FT misc_feature 167479..167502 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 167827..167871 FT /note="PS00211 ABC transporters family signature." FT CDS 168132..168857 FT /transl_table=11 FT /locus_tag="BPP2111" FT /product="Putativa ABC transport system, ATP-binding FT protein" FT /note="Similar to Anabaena sp ATP-binding protein of FT branched-chain amino acid ABC transporter ALL2912 FT SWALL:Q8YT15 (EMBL:AP003591) (247 aa) fasta scores: E(): FT 7.1e-32, 47.84% id in 232 aa, and to Pseudomonas aeruginosa FT high-affinity branched-chain amino acid transport FT ATP-binding protein BraG or PA1070 SWALL:BRAG_PSEAE FT (SWALL:P21630) (233 aa) fasta scores: E(): 1.5e-26, 43.96% FT id in 232 aa" FT /db_xref="GOA:Q7W8M1" FT /db_xref="HSSP:1JI0" FT /db_xref="InterPro:IPR003439" FT /db_xref="UniProtKB/TrEMBL:Q7W8M1" FT /protein_id="CAE37411.1" FT /translation="MKTILELENVSAGYGETPIVQGIDMSVSEKEIVTIAGTNGAGKST FT LIKAVMGLLPRVAGSIVLNGKSLKELPVERRIFQGIGYVPQVSNVFGTLTVMENLQVVE FT AVDDRKAMIDRMLTLFPVLAERRRTQAENLSGGERQQLAFARALMSKPSLVLLDEPSAA FT LSPALTEQVFREVKRLPELGVAVLMVEQRARQALEFSDRGYILDSGRIVLADTAQALLQ FT NQEMADLYIGRSAASNQDS" FT misc_feature 168219..168758 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.9e-45" FT misc_feature 168240..168263 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 168854..170236 FT /transl_table=11 FT /locus_tag="BPP2112" FT /product="Putative amidase" FT /note="Similar to Bradyrhizobium japonicum malonamidase E2 FT SWALL:Q9ZIV5 (EMBL:AF012735) (414 aa) fasta scores: E(): FT 1.6e-35, 33.25% id in 415 aa, and to Pseudomonas putida FT amidase SWALL:AMID_PSEPU (SWALL:O69768) (466 aa) fasta FT scores: E(): 5e-18, 29.42% id in 435 aa" FT /db_xref="GOA:Q7W8M0" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q7W8M0" FT /protein_id="CAE37412.1" FT /translation="MNEAFSTQGVISMSEERTVSQPAERRPAPSRIAALTVEQGLREME FT AGKLSSEQWTQACLERIASRNPVVKAWVYVNADKALERARLVDREGRRQRLDGVPLGLK FT DIIDTADMPTELGDPEIFPGRRPAEDAAVTRLMRELGVVLLGKNTVSRHSIMLPGPARN FT PHDPSRTPGASSAGSAAAVADFQTPISLGTQTGGSIVRPSTFCGAVGFKPTIDTLPYAG FT LRRYSRPLDTLGAIARSVADLSILFGEALGDPRFDSELAVRRDFTVGVWRPLGWDDAEP FT CVREAFDDAVARLQQAGVRVKVLDMPKIFTQIADDHDIIMAYDLARSFKEIRRDHHDKC FT DPALLEYLDKGDRDTAQDYARTLDLADACRRAFLDVARDVDVLPTPATLGEAPDVSDTG FT SNIFIRIWTLLHNPSLTLPIARGPRGLPVGLQLVGFQKEDARFLYWARCVESILGTRVH FT DV" FT misc_feature 169010..170182 FT /note="HMMPfam hit to PF01425, Amidase, score 6.5e-69" FT CDS 170316..171710 FT /transl_table=11 FT /locus_tag="BPP2113" FT /product="Conserved hypothetical protein" FT /note="Similar to Pseudomonas aeruginosa hypothetical FT protein PA1567 SWALL:Q9I3F0 (EMBL:AE004585) (465 aa) fasta FT scores: E(): 2.3e-85, 51.32% id in 452 aa, and to FT Escherichia coli probable oxidoreductase OrdL or B1301 FT SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): FT 8.4e-22, 30.5% id in 436 aa" FT /db_xref="GOA:Q7W8L9" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q7W8L9" FT /protein_id="CAE37413.1" FT /translation="MSSLWLDQARGSEPACPALQGATRADVCIVGGGYTGLWTALQLRE FT QSPGLDIVLLEAQECGAGASGRNGGFMLSWAAKFETLLKVCGTDEALRLLGESERIAAD FT VAGYLKRHGVDAQLRQDGWLWTASNAAQVDSWMPCIELLARHGQQAFVALPADEVRRLS FT GSAAHLAGVLSRSSATVHPGMYVRGLRRIALAKGIRIYEHTPMRSLRARPQPTVATARG FT EVRAAKVVLAMNAWSTRFRELNKGVVVVGSDLVATAPHPEALEKIGLTSGVAISDSRLF FT TNYYRNTCAGEMVFGRGGGDFAFNGAVGRLYEGPSGFAREVAAILHRFYPALAPLGIVR FT SWSGPIDRSMDGLPCFGHLGGHPDIVYGYGYSGNGVGPTYLGGKFLASMVLENDDAWRH FT SALARGLRGRFPPEPFRYVGSRVVKAALVRKEAAEDQGQAPARLDTMLAGLAPGGLVPV FT ARKEKA" FT CDS 171775..172488 FT /transl_table=11 FT /locus_tag="BPP2114" FT /product="Putative GntR-family transcriptional regulator" FT /note="Similar to Deinococcus radiodurans transcriptional FT regulator, GntR family DR0815 SWALL:Q9RW54 (EMBL:AE001936) FT (267 aa) fasta scores: E(): 1.2e-08, 31.15% id in 199 aa, FT and to Brucella melitensis transcriptional regulator, GntR FT family BMEII0281 SWALL:Q8YD96 (EMBL:AE009666) (238 aa) FT fasta scores: E(): 2.9e-08, 28.57% id in 210 aa" FT /db_xref="GOA:Q7W8L8" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8L8" FT /protein_id="CAE37414.1" FT /translation="MANFQATIHSRPLSPEFMTQARRPASTIQAVLTNLREKISLQSIL FT PGARLTEEELVDNYSIPRAMAREVLAVLEDRGIVRRIPNKGAVVAHVDMQWVYHYYDAR FT EALDGMMVRLAARQTRPEDWADLVEQFGEPFQKALETGDVDRLISLIETFRNRLQTAAN FT NPVLSDLAERIHERIRVVRQRVVLLPGRAETMVADYRAVLAALARSDAEEAEQLMGILN FT RNNRAAIQKYERYVV" FT misc_feature 171865..172041 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 0.0002" FT CDS complement(172532..172840) FT /transl_table=11 FT /locus_tag="BPP2115" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Vibrio cholerae hypothetical 11.2 FT kDa protein SWALL:O31026 (EMBL:AF025662) (98 aa) fasta FT scores: E(): 0.00025, 26.31% id in 95 aa" FT /db_xref="InterPro:IPR013097" FT /db_xref="UniProtKB/TrEMBL:Q7W8L7" FT /protein_id="CAE37415.1" FT /translation="MTMFLHVVMMEFDDGIDAGFFRTVDEYVARMKRECDGLLLYHFGE FT NVAARSQGYTHATSSAFVDAAAHDAYQVCPAHVAMKAFMGPRIKRVVVYDGEVPAIG" FT CDS complement(join(172860..173282,173284..173688)) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2116" FT /product="probable short chain dehydrogenase (Pseudogene)" FT /note="Similar to Rhizobium loti probable short chain FT dehydrogenase Mll1036 SWALL:Q98LG1 (EMBL:AP002996) (268 aa) FT fasta scores: E(): 2.3e-17, 36.99% id in 273 aa, and to FT Streptococcus pneumoniae R6 5-keto-D-gluconate 5-reductase FT Gno SWALL:AAK99094 (EMBL:AE008410) (271 aa) fasta scores: FT E(): 7e-17, 32.97% id in 279 aa" FT /db_xref="PSEUDO:CAE37416.1" FT misc_feature complement(join(172875..173282,173284..173667)) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase, FT score 1.3e-66" FT misc_feature complement(173434..173457) FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT misc_feature complement(173602..173667) FT /note="1 probable transmembrane helix predicted for BPP2116 FT by TMHMM2.0 at aa 7-29" FT CDS complement(173723..175003) FT /transl_table=11 FT /locus_tag="BPP2117" FT /product="Putative ABC transport system, membrane protein" FT /note="Similar to Rhizobium meliloti probable ABC FT transporter integral membrane protein RB0038 or SMB20035 FT SWALL:Q92XC4 (EMBL:AL603642) (426 aa) fasta scores: E(): FT 2.3e-89, 58.25% id in 424 aa, and to Salmonella typhimurium FT putative DedA family, membrane protein YiaN or STM3672 FT SWALL:Q8ZL80 (EMBL:AE008870) (425 aa) fasta scores: E(): FT 7.7e-86, 56.6% id in 424 aa" FT /db_xref="GOA:Q7W8L6" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q7W8L6" FT /protein_id="CAE37417.1" FT /translation="MTLAIFVFVLLAGLAIGLPVAYALILTGVALMYQLDFYDAQIVAQ FT NLLNGADSFPLMAVPFFMLAGAVMNAGGLSARIVDLALKLVGHIKGGLGYVTILAACIL FT ASLSGSAAADAAALSALLVPMMMKAGHSRARSSGLVASSGIIALVIPPSIGLVLIGVTG FT NISITGLFMAGIVPGILMGMSLCVAWWLLSRKERIQPLPRVDRAEVRQSLVRSFWALML FT PVIIIVGLRFGIFTPTEAGVVAAVYAIFVATCIYRELPMRRLYEVFLTSAKMTAMVMFL FT VAGALVSGWMITVAGLPAQVSDIISPFSDTPTLLMLVIIGLVIVIGMAMDMIPIVLILI FT PVLLPSVTAAGIDPVYFGVVFMLACAIGLITPPVGAVLNVVAGVTGTRMVELVKGVWPF FT LLAQCATLLLLIPFPQLVLAPYRWIMH" FT misc_feature complement(join(173753..173818,173858..173923, FT 173939..174004,174026..174091,174107..174172, FT 174236..174286,174299..174364,174428..174493, FT 174524..174589,174611..174667,174683..174748, FT 174770..174835,174917..174982)) FT /note="13 probable transmembrane helices predicted for FT BPP2117 by TMHMM2.0 at aa 7-29, 56-78, 85-107, 112-131, FT 138-160, 170-192, 213-235, 239-256, 277-299, 304-326, FT 333-355, 360-382 and 395-417" FT misc_feature complement(174137..174610) FT /note="HMMPfam hit to PF00597, DedA family, score 1.3e-29" FT CDS complement(175003..175515) FT /transl_table=11 FT /locus_tag="BPP2118" FT /product="Putative ABC transport system, membrane protein" FT /note="Similar to Rhizobium meliloti putative ABC FT transporter integral membrane protein RB0037 or SMB20034 FT SWALL:Q92XC5 (EMBL:AL603642) (187 aa) fasta scores: E(): FT 5e-25, 49.34% id in 152 aa, and to Agrobacterium FT tumefaciens hypothetical protein ATU2742 or AGR_C_4972 FT SWALL:AAL43723 (EMBL:AE009221) (176 aa) fasta scores: E(): FT 5.4e-21, 40.13% id in 152 aa" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q7W8L5" FT /protein_id="CAE37418.1" FT /translation="MTRIVHAYFTLLKAVIVICLAAMVVMVFSNVVLRFIFNSGIPVSE FT ELSRWSFVWLTFLGAILVLHERSHLGVDVVLQVLGPLARRVCLIVANLLMIYATWLILL FT GSIEQTTLNMGASAPASGLSQAWFFGVGVVFAASTGLILLYQLYQLFTVPAANLHKLIS FT PHESGAE" FT misc_feature complement(join(175081..175146,175192..175257, FT 175321..175374,175435..175500)) FT /note="4 probable transmembrane helices predicted for FT BPP2118 by TMHMM2.0 at aa 5-27, 47-65, 86-108 and 123-145" FT CDS complement(175594..176652) FT /transl_table=11 FT /locus_tag="BPP2119" FT /product="Putative ABC transport system, solute-binding FT protein" FT /note="Similar to Rhizobium meliloti putative ABC FT transporter periplasmic solute-binding protein RB0039 or FT SMB20036 SWALL:Q92XC3 (EMBL:AL603642) (338 aa) fasta FT scores: E(): 5.4e-49, 41.21% id in 330 aa, and to FT Agrobacterium tumefaciens C4-dicarboxylate binding protein FT ATU2744 or AGR_C_4976 SWALL:AAL43725 (EMBL:AE009221) (335 FT aa) fasta scores: E(): 1.4e-44, 39.5% id in 324 aa" FT /db_xref="GOA:Q7W8L4" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q7W8L4" FT /protein_id="CAE37419.1" FT /translation="MSRQDTIPRTRQERQMKFHYKRVAAGLAIALGAGMAMQAAADIQE FT RRVKFSYPVSKTNPVVLATDKFIELVGQKTGGKIKVTGYADAQLGNEIQAMSSAQGGII FT ELTVVSTAGAANNVKELGIFDLPFLFHSVEEADAVIDGPVGKELLGKFAAKNLVGLCYW FT DYGFRQVSNSKHPINKVEDFDGLKLRVLQNRIYIDTFKALGANPLPLPYPETYTALETK FT AIDGQESAYLVTKSSGYQEIQKYMTETNHVFLPAVVMASKRFWDRLSKDEQAIIQQSCD FT ESVAYFRTTSRDLERKVVGELTAAGMTMNQIAPAEKARMAQATAAVTDKYKAELGADLV FT DRTLATINQARK" FT misc_feature complement(175648..176505) FT /note="HMMPfam hit to PF03480, Bacterial extracellular FT solute-binding protein, family 7, score 5.2e-98" FT misc_feature complement(176530..176652) FT /note="Signal peptide predicted for BPP2119 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.804 between residues 41 and 42" FT CDS complement(176649..177044) FT /transl_table=11 FT /locus_tag="BPP2120" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q7W8L3" FT /protein_id="CAE37420.1" FT /translation="MNIPDALKPYATGELASRYVNVDELDWKPTPTPGIDMKILLDVPE FT TGLLTALFRWAPGTALPLHEHVEIEQTYVLSGSIVDDEGVVREGNYVWRPKGNRHIARS FT PDGALVLSFFLKPNKFLEGELAGKELK" FT CDS complement(177085..177999) FT /transl_table=11 FT /locus_tag="BPP2121" FT /product="Putative hydrolase" FT /note="Similar to Bacillus subtilis YisK protein FT SWALL:O06724 (EMBL:Y09476) (301 aa) fasta scores: E(): FT 6.7e-47, 46.75% id in 308 aa, and to Ralstonia solanacearum FT hypothetical protein RSC1824 or RS04254 SWALL:Q8XYD4 FT (EMBL:AL646066) (319 aa) fasta scores: E(): 1.2e-35, 40.19% FT id in 311 aa" FT /db_xref="GOA:Q7W8L2" FT /db_xref="HSSP:1GTT" FT /db_xref="InterPro:IPR002529" FT /db_xref="UniProtKB/TrEMBL:Q7W8L2" FT /protein_id="CAE37421.1" FT /translation="MKFLTFSVQEQSRLGMLLDENRVLDLTALLAARPDLGLPGALRNV FT GELIALGEEALARLREPGLLDGVDVGALPTLQAVRVLPPLPMARNVFCVGRNYREHIIE FT GNLARGRPANSFPEAIEFFTKAPTAVIGHGGHVKRHAGLTDSLDYEVELAIVIGRAGAD FT IPREKALDHVFGYTIVNDITARDLQARHGQWFKGKSLDTSCPMGPVVVHRSAIPDANNL FT AVSLSVNGELRQQDNTSDMIFDVATVVAQLSAGMTLLPGDVIATGTPKGVGFALTPPRC FT LQVGDVVSASVEHIGTLTNEIVA" FT misc_feature complement(177169..177663) FT /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA) FT hydrolase family, score 2.1e-76" FT misc_feature complement(177403..177426) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(178046..178717) FT /transl_table=11 FT /locus_tag="BPP2122" FT /product="Putative GntR-family transcriptional regulator" FT /note="Similar to Brucella melitensis transcriptional FT regulator, GntR family BMEII0281 SWALL:Q8YD96 FT (EMBL:AE009666) (238 aa) fasta scores: E(): 3e-14, 36% id FT in 200 aa, and to Vibrio cholerae transcriptional FT regulator, GntR family VC1335 SWALL:Q9KSC3 (EMBL:AE004213) FT (235 aa) fasta scores: E(): 1.7e-11, 34.09% id in 176 aa" FT /db_xref="GOA:Q7W8L1" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8L1" FT /protein_id="CAE37422.1" FT /translation="MAGIQKKAGAQSVFEDVSALLRDMMKDITEPVRVREEDLANQLGV FT SRTPVREALIRLESTGMVHLRPGRGALLTPVTDEEYIEWLQLREQLEGFATREAALNAS FT QRDVERLRALFAPFIGLDEDAFAPVPYGQANVAFHKEIIALANNRLLERVWAAFGHRQT FT TYRRQTIKRLHRFGTSLREHLAIIDAIERRDADLAEKLARQHVRTLYDAFVKALQSGGG FT A" FT misc_feature complement(178499..178669) FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 2.3e-05" FT misc_feature complement(178547..178621) FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT CDS complement(178907..179410) FT /transl_table=11 FT /locus_tag="BPP2123" FT /product="Putative AsnC-family transcriptional regulator" FT /note="Similar to Salmonella typhi putative transcriptional FT regulator STY1005 SWALL:Q8Z7Z1 (EMBL:AL627268) (153 aa) FT fasta scores: E(): 4e-35, 66.66% id in 144 aa, and to FT Haemophilus influenzae leucine-responsive regulatory FT protein Lrp or HI1596 SWALL:LRP_HAEIN (SWALL:P45265) (166 FT aa) fasta scores: E(): 5.9e-11, 35.25% id in 139 aa" FT /db_xref="GOA:Q7W8L0" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q7W8L0" FT /protein_id="CAE37423.1" FT /translation="MAITLDAYDRKILELLQENNRLSQRELAGSVNLSASAVNRRIAAL FT EANKVIRANVALVDPELVGRPITLMVEVKIENERLDLLDEVTNRFVRCPQIQQVYYVTG FT DFDFLLVLNCKDMTEYERLTRELFFTAGNVKKFRTVVAMNVAMNVAKSTLQVPLGDVPA FT PPGD" FT misc_feature complement(179015..179326) FT /note="HMMPfam hit to PF01037, AsnC family, score 1.9e-26" FT CDS complement(179645..180847) FT /transl_table=11 FT /locus_tag="BPP2124" FT /product="Putative diaminopropionate ammonia-lyase" FT /EC_number="4.3.1.15" FT /note="Similar to Rhizobium loti hypothetical protein FT MLR7936 SWALL:Q984M4 (EMBL:AP003013) (361 aa) fasta scores: FT E(): 8.1e-77, 62.18% id in 357 aa, and to Escherichia coli FT putative diaminopropionate ammonia-lyase YgeX or B2871 or FT Z4210 or ECS3744 SWALL:DPAL_ECOLI (SWALL:Q46804) (398 aa) FT fasta scores: E(): 1.8e-40, 38.83% id in 394 aa, and to FT Salmonella typhimurium diaminopropionate ammonia-lyase DpaL FT or STM1002 SWALL:DPAL_SALTY (SWALL:P40817) (404 aa) fasta FT scores: E(): 5.7e-39, 38.24% id in 387 aa" FT /db_xref="GOA:Q7W8K9" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/TrEMBL:Q7W8K9" FT /protein_id="CAE37424.1" FT /translation="MLLINAHPDRNKPLDEPDRKVFDASAAQQAERFARARPGYAPTRL FT VALPGLARAQRVASIQVKDESTRFGLGSFKALGGAYAVIRLALQQASQALGRAAGIDEL FT DSQAVRAAAADIVVACATDGNHGKSVAQGAALVGARAVIFVHAGVSQARVDAIAQFGAQ FT IVRVEGNYDDSVAEATAVAQKNGWTIVSDTSWPGYEHIPSLVMQGYTTLLREAMQAMPQ FT PPTHVFIQAGVGGIAAATAACMSLAYEAAGAAAPKFIVVDPQRAACLFESARLGKRVRV FT DEQEPTIMAMLECYEPSMVAWRILARTAHAFMTVDEQDAVQAMRTLAAPAAGDAPIVAG FT ESGGVGLAAFLAAARDDGMRRDLGIDAEARIFVINTEGATDPARYQDIVGRTPEAVLAG FT A" FT misc_feature complement(179714..180742) FT /note="HMMPfam hit to PF00291, Pyridoxal-phosphate FT dependent enzyme, score 8.6e-09" FT CDS 181220..182404 FT /transl_table=11 FT /locus_tag="BPP2125" FT /product="Putative peptidase" FT /note="Similar to Rhizobium loti hippurate hydrolase FT MLR7940 SWALL:Q984M2 (EMBL:AP003013) (379 aa) fasta scores: FT E(): 1.8e-77, 56.34% id in 378 aa, and to Arabidopsis FT thaliana IAA-amino acid hydrolase 3 precursor Iar3 or ILL1 FT or AT5G56650 or MIK19.10 SWALL:ILR3_ARATH (SWALL:P54969) FT (438 aa) fasta scores: E(): 7e-38, 35.32% id in 385 aa" FT /db_xref="GOA:Q7W8K8" FT /db_xref="InterPro:IPR002933" FT /db_xref="UniProtKB/TrEMBL:Q7W8K8" FT /protein_id="CAE37425.1" FT /translation="MGTPFSHDALFKELRAIRQDIHANPEFGFQERRTSGRVAAMLRAC FT GIAVTEGVGGTGVVGTLKRGASGKAIILRADMDALHIAEAPAEDRPHASRNDGYMHACG FT HDGHTTMLLGAAQLLAQNPDFDGTIHFVFQPAEEWGKGMLAMLDDGLLERFPASEAYAL FT HNAPGLPVGKFETRAGVFKSAEDNFEIRIAGKGVHSARPHLGRDALVAAAGVIVALQTI FT VSRVVAPGEFAIVSCTDMTTSGTRNVSSGEVVISGDCRSFKPETSALIEAEMRRVADHV FT AAGYGCAASVDYSRVFVPTVNDARITAAVEGIVKDRFGGDAIDAAAAPSNGSEDFAQLL FT RRIPGCYVNLGNGPSAALHNPAYDFNDEAIPYGVGFFVAIALARLPQAQFRSET" FT misc_feature 181250..182209 FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40, score 5.2e-37" FT CDS 182401..183411 FT /transl_table=11 FT /locus_tag="BPP2126" FT /product="Putative ABC transport system, substrate-binding FT protein" FT /note="Similar to Agrobacterium tumefaciens ABC FT transporter, substrate binding protein ATU1577 or FT AGR_C_2905 SWALL:AAL42581 (EMBL:AE009115) (343 aa) fasta FT scores: E(): 9.3e-68, 51.32% id in 341 aa, and to FT Escherichia coli O157:H7 putative amino-acid ABC FT transporter binding protein YhdW precursor or Z4629 or FT ECS4141 SWALL:YHDW_ECO57 (SWALL:P58068) (341 aa) fasta FT scores: E(): 2.7e-64, 48.97% id in 341 aa" FT /db_xref="GOA:Q7W8K7" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q7W8K7" FT /protein_id="CAE37426.1" FT /translation="MKKTLTSPLVAAIAHTAAPVHAGTLEDVKARGNLLCSSTTGSPGF FT SMPDDAGKRHGLEVDVCRAIATAVFGDPERHKIVVLNPIQRFTALQSGEVDILFNTTTW FT TLSREGAGALYAGVTYYDGQGVLVRKGTIASAKELDGGAICTNQGSTTELNLVDFFRAN FT KVSNEVITFATVQEAANAYESGRCDAWSADAGILAALRSKMKAPDDHVILADRLSKEPL FT GAAVRKGDDAWFSVVRWSIFALQAAEELGLTSKNIAEQAKSTTNPEVLRFVGKEGSLGK FT VLGLNGDWAYQIVAQVGSYAEIFDRNIGAASPLNLERGINASWKNGGLFYTPPFR" FT misc_feature 182401..182466 FT /note="Signal peptide predicted for BPP2126 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.987 between residues 22 and 23" FT misc_feature 182500..183180 FT /note="HMMPfam hit to PF00497, Bacterial extracellular FT solute-binding proteins, family 3, score 3.9e-27" FT misc_feature 182566..182607 FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature." FT CDS 183542..184753 FT /transl_table=11 FT /locus_tag="BPP2127" FT /product="Putative ABC transport system, integral membrane FT protein" FT /note="Similar to Brucella melitensis general L-amino acid FT transport system permease protein AapQ BMEI1210 FT SWALL:Q8YGE9 (EMBL:AE009560) (397 aa) fasta scores: E(): FT 3.9e-62, 48.34% id in 393 aa, and to Rhizobium FT leguminosarum general L-amino acid transport system FT permease protein AapQ SWALL:AAPQ_RHILV (SWALL:Q52813) (400 FT aa) fasta scores: E(): 1.3e-55, 47.66% id in 386 aa" FT /db_xref="GOA:Q7W8K6" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q7W8K6" FT /protein_id="CAE37427.1" FT /translation="MQDSTIALKRPDKRAARPLLSRLHDRKVRGVLLQLLLAALLLWLG FT YVGVSNAVANLKAANIASGFGFLASTAGFDINQSLIPYSGATSTYGDAFVVGLLNTLLV FT AAIGIVLATLIGFLVGIARLSSNVVVAAVATLYVETLRNLPLLLQIFFWYSAVLVALPA FT ARESLHLADWVFLNNRGLYLPFVNIDGPAWPLWLVLALAVLGYALARRLALRARLRGGR FT SYPARTMALGLFVVVLGGGLLAVDPAASLDLPRFRGFGFAGGLRIYPEMVALVVALSTY FT TAAFIAEIVRAGIGAVGQGQREAAVALGLSPRHTQSLVITPQALRVIIPPLTSQFLNLT FT KNSSLAVAIAYPDLVQVFMGTVLNQTGRAVEIVSITMAVYLAISLVTSALMGVYNRRVR FT LVER" FT misc_feature join(183632..183700,183839..183907,183968..184036, FT 184115..184168,184226..184294,184352..184420, FT 184568..184627,184655..184723) FT /note="8 probable transmembrane helices predicted for FT BPP2127 by TMHMM2.0 at aa 31-53, 100-122, 143-165, 192-209, FT 229-251, 271-293, 343-362 and 372-394" FT misc_feature 184418..184648 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 7.6e-12" FT CDS 184766..185920 FT /transl_table=11 FT /locus_tag="BPP2128" FT /product="Putative ABC transport system, integral membrane FT protein" FT /note="Similar to Rhizobium meliloti probable general FT L-amino acid transport permease ABC transporter protein FT AapM or R01476 or SMC02120 SWALL:Q92Q73 (EMBL:AL591787) FT (384 aa) fasta scores: E(): 3.6e-72, 51.68% id in 385 aa, FT and to Rhizobium leguminosarum general L-amino acid FT transport system permease protein AapM SWALL:AAPM_RHILV FT (SWALL:Q52814) (384 aa) fasta scores: E(): 2.8e-67, 47.92% FT id in 386 aa" FT /db_xref="GOA:Q7W8K5" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q7W8K5" FT /protein_id="CAE37428.1" FT /translation="MNHSTTKQPAFVQAQAVQERPPPHQAGTAWAWVRQYVFESPRTFA FT LTLACAAILYWVLRGLLDFLVLDATWSGGAVQACQASIAQGRYGACWPFIDAKLGYFVF FT GGYPPPQRWRVVLFFVLAAAGIVWLLARRIRAKRVGAAYFFVVLPPLSYALLVGADALG FT LPHVSTDLWGGILVTLVVSLVGIVFSLPIGIVLALGRRSELPFVRLASTVAIELGRGVP FT LITVLFMFNTMLPLFLPEGLRPDRLLRPLVGVTLFASAYMAEVVRGGLQALPKGQYEGA FT QSLGLGYWQTTFLIVLPQALRIVVPGIVNTFIGLFKDTTLVAMVGILDLLKVVEVAIND FT PAWATPVTRYTGYAFLAFFYCACCYAMSRYSRSVERTLARSEKR" FT misc_feature join(184895..184963,185102..185155,185189..185257, FT 185285..185353,185414..185482,185621..185680, FT 185699..185758,185801..185869) FT /note="8 probable transmembrane helices predicted for FT BPP2128 by TMHMM2.0 at aa 44-66, 113-130, 142-164, 174-196, FT 217-239, 286-305, 312-331 and 346-368" FT misc_feature 185570..185821 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component, score 4.6e-17" FT misc_feature 185573..185659 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 185926..186714 FT /transl_table=11 FT /locus_tag="BPP2129" FT /product="Putative ABC transport system, ATP-binding FT protein" FT /note="Similar to Agrobacterium tumefaciens ABC FT transporter, nucleotide binding/ATPase protein ATU1580 or FT AGR_C_2909 SWALL:AAK87363 (EMBL:AE009115) (257 aa) fasta FT scores: E(): 1.1e-63, 69.29% id in 254 aa, and to Rhizobium FT leguminosarum general L-amino acid transport ATP-binding FT protein AapP SWALL:AAPP_RHILV (SWALL:Q52815) (257 aa) fasta FT scores: E(): 8.8e-63, 70.12% id in 241 aa" FT /db_xref="GOA:Q7W8K4" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8K4" FT /protein_id="CAE37429.1" FT /translation="MNLRKLFSKDPVSAIDLDRHPAVEMRKVSKWYGNFHVLREVDLTV FT GKGERIVVCGPSGSGKSTMIRCINQLERHQEGEIRIGGAEVDDNLERLNAVRMEVGMVF FT QHFNLFPHLTVLQNCMLAPVWVKRKSEAEARDIAMHYLSRVRIPDQAGKFPGQLSGGQQ FT QRVAIARSLCMAPKIMLFDEPTSALDPEMVKEVLDTMTTLAQDGMTMLCVTHEMGFARK FT VADRVVFMDAGQIVEVNTPDAFFTRPQHERSVAFLRQIVH" FT misc_feature 186067..186624 FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.6e-64" FT misc_feature 186088..186111 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 186397..186441 FT /note="PS00211 ABC transporters family signature." FT CDS 186799..187143 FT /transl_table=11 FT /locus_tag="BPP2130" FT /product="Putative membrane protein" FT /note="Low similarity to Vibrio cholerae hypothetical FT protein VC0198 SWALL:Q9KVE8 (EMBL:AE004110) (125 aa) fasta FT scores: E(): 0.00022, 27.92% id in 111 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W8K3" FT /protein_id="CAE37430.1" FT /translation="MYESKGEPLLPTRHFMLRLLVHLLWAVLVIALVVFVGVVAHLWLE FT DISWHDAMLNTALIIGGIGPFIMPATVAGKIFFALYGMLIGLLFVATLGLILAPVAHRV FT IHKFHLDDDD" FT misc_feature join(186856..186924,186952..187020,187024..187092) FT /note="3 probable transmembrane helices predicted for FT BPP2130 by TMHMM2.0 at aa 20-42, 52-74 and 76-98" FT CDS complement(187163..188386) FT /transl_table=11 FT /locus_tag="BPP2131" FT /product="Putative amino acid aminotransferase" FT /note="Similar to Fusobacterium nucleatum subsp. nucleatum FT ATCC 25586 aspartate aminotransferase FN0605 SWALL:AAL94801 FT (EMBL:AE010572) (403 aa) fasta scores: E(): 7e-77, 52.82% FT id in 407 aa, and to Sulfolobus solfataricus aspartate FT aminotransferase AspC or SSO0897 SWALL:AAT_SULSO FT (SWALL:P14909) (401 aa) fasta scores: E(): 7.3e-20, 25.06% FT id in 371 aa" FT /db_xref="GOA:Q7W8K2" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q7W8K2" FT /protein_id="CAE37431.1" FT /translation="MTPIEAKFARLSTDHAPDQEVRQGNAGLDGLLRGDTLPGTPVDFS FT HGDVNTSAFAPTPGSLQEFVQGVERGGEQAYTEYRGAADLRLRVAAHLAEFTGAPVDGA FT NELIITPGTQGALFLAIASSVTAGDKVAIVRPDYFANRKLVEFLGDEIVPVDMRHLERD FT SGAGLDLDQLEAAFKAGVRTFLFSNPNNPAGVVYSPEEIAQIADLARHYDATVIVDQLY FT SRLLYTGTRYTHLRALPQAPANVITIMGPSKTESLSGYRLGVAFGAAHLIDRMEKLQAI FT VSLRAPGYCQAVLRTWFQEPAGWMNERIAQHQAIRDDLIRVLRAVPGLAVRAPEAGSYL FT FPRLPRLAVGLHDFVRILRTQAGVTVTPGTEFSPHADDSIRLNFSQNHAAAVQAIERTA FT QLIERYRA" FT misc_feature complement(187190..188113) FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 2.3e-07" FT CDS complement(188408..189400) FT /transl_table=11 FT /locus_tag="BPP2132" FT /product="Putative dehydrogenase" FT /note="Similar to Agrobacterium tumefaciens FT phosphoglycerate dehydrogenase SerA or ATU5328 or FT AGR_PAT_470 SWALL:AAL46016 (EMBL:AE008954) (354 aa) fasta FT scores: E(): 4.8e-34, 38.65% id in 313 aa, and to FT Methanococcus jannaschii D-3-phosphoglycerate dehydrogenase FT SerA or MJ1018 SWALL:SERA_METJA (SWALL:Q58424) (524 aa) FT fasta scores: E(): 2.4e-29, 34.76% id in 325 aa" FT /db_xref="GOA:Q7W8K1" FT /db_xref="HSSP:1HKU" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W8K1" FT /protein_id="CAE37432.1" FT /translation="MRTSTMKCLIVQPIHEEGLALLREAGVECIAPASAAMADVAAAIA FT DCDAAITRNAGLDTRAIEAGRRLRVIGNHGTGTNMIDLAAAERLGIPVVNTPGANARSV FT AELALAMAMALLKRTVPLNQAVRQGNWNIRYEAGLRELSGMSLGIVGFGQIGRALAAMA FT IGGFGMRVHVYSPSVAPQDIAAAGCQRADSLPALAREADIVSLHRPARPGAGPLVDDAL FT LQAMKPGALLINTARADLVDEAALARHLEAGRLGGAGLDVFSSEPPPADHPLLRLPQVV FT LAPHAGGSTDQALARTARAVAEQVIEVLRDARPAHLIAPHAWPRRRGAR" FT misc_feature complement(188546..189103) FT /note="HMMPfam hit to PF02826, D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD binding domain, score FT 6.2e-56" FT misc_feature complement(188876..188962) FT /note="PS00065 D-isomer specific 2-hydroxyacid FT dehydrogenases NAD-binding signature." FT misc_feature complement(189107..189388) FT /note="HMMPfam hit to PF00389, D-isomer specific FT 2-hydroxyacid dehydrogenase, catalytic domain, score FT 1.9e-05" FT CDS complement(189397..190671) FT /transl_table=11 FT /locus_tag="BPP2133" FT /product="Putative amino acid hydrolase" FT /note="Similar to Yersinia pestis putative amino acid FT hydrolase YPO3249 SWALL:Q8ZBY1 (EMBL:AJ414156) (430 aa) FT fasta scores: E(): 2e-27, 32.86% id in 423 aa, and to FT Bacillus stearothermophilus N-carbamoyl-L-amino acid FT amidohydrolase AmaB SWALL:AMB2_BACST (SWALL:Q53389) (409 FT aa) fasta scores: E(): 2.1e-26, 34.28% id in 385 aa" FT /db_xref="GOA:Q7W8K0" FT /db_xref="InterPro:IPR002933" FT /db_xref="UniProtKB/TrEMBL:Q7W8K0" FT /protein_id="CAE37433.1" FT /translation="MHSAPDPDLDLAARLFDSLRAQSFDGVGVTRDAYGAGEQRAHDLV FT RACARDLDLPVRVDASGNLYVTLPGRDPARPARMTGSHLDSVPAGGNFDGAAGVVAGLA FT VLAGWRAAGWRPAADVTVMAIRAEESTWFPYSYLGSKAAFGLAAPDVLDLRRADTGRSL FT RDHLADLSIDPQRYGQPALRAAGIDRYVELHIEQGPTLVEAGLPAGIVTGIRGSFRYRD FT MAWHGEYAHSGAVGRAHRRDAVRAAALWMASLDRDWETLEDFGEDLVVTVGKVATDPQQ FT HAFSKVAGELQCCVDVRSISATLLERFDRLLRQRGVAAARATGTRVDFGPRTGSAPAAM FT DPGLIARLTAQARQRGIAALSMPSGAGHDAAIFAQQGIPTAMIFVRNEHGSHNPHEAMD FT MADFACATQLLSDILADDQPVTPHP" FT CDS complement(190676..191473) FT /transl_table=11 FT /locus_tag="BPP2134" FT /product="Putative decarboxylase" FT /note="Similar to Pyrococcus horikoshii 238aa long FT hypothetical arylmalonate decarboxylase PH0985 SWALL:O58713 FT (EMBL:AP000004) (238 aa) fasta scores: E(): 1.2e-33, 44.62% FT id in 242 aa, and to Bordetella bronchiseptica arylmalonate FT decarboxylase SWALL:AMDA_BORBR (SWALL:Q05115) (240 aa) FT fasta scores: E(): 1.4e-15, 36.7% id in 237 aa" FT /db_xref="InterPro:IPR015942" FT /db_xref="UniProtKB/TrEMBL:Q7W8J9" FT /protein_id="CAE37434.1" FT /translation="MPAPTQMKTTARYRPYAWRAKVGLIVPSTNTINEPEFYRLAPDGV FT TIHTGRAINAGPATQENYDRMARGVLEAADLIKTAEVDVVAYGCTSGSIVCSLDELCDG FT MSERVGVPAIATAGAVVAALRALGVRRVAVGTPYIDFVNQREREFLEQYGFEVVSIEGM FT DLGHTQEERRDIGRVPPQSTFQLARDIDRPQAEAIFLSCTNLATLDMIERIENELGKPV FT VTSNQATFWACLRLLGLSCAIPGYGRLLTDCLAPITRASYALA" FT CDS complement(191473..192267) FT /transl_table=11 FT /locus_tag="BPP2135" FT /product="putative aldolase" FT /note="Similar to Staphylococcus aureus hypothetical FT protein SAV0122 or SA0118 SWALL:Q99X93 (EMBL:AP003358) (259 FT aa) fasta scores: E(): 1.2e-18, 30.7% id in 254 aa, and to FT Salmonella typhimurium, and Salmonella typhi FT 2-dehydro-3-deoxy-galactarate aldolase GarL or STM3249 or FT STY3431 SWALL:Q8XGF9 (EMBL:AE008849) (256 aa) fasta scores: FT E(): 7.6e-17, 28.93% id in 235 aa" FT /db_xref="GOA:Q7W8J8" FT /db_xref="InterPro:IPR005000" FT /db_xref="UniProtKB/TrEMBL:Q7W8J8" FT /protein_id="CAE37435.1" FT /translation="MKHNPLKQIWRQGKPVFGTWATMVRHPRFMKLLSVTGLDFVLIEM FT EHSDFSISEVANLCLMAREAGIVPIVRPAGSDSHDYTRPLDAGAMGLLLPNVETPEQLS FT RILHQTKYYPDGQRILNMRGPHTDYVRLSAPLAQTAELNAHTLTIAMAETRLGLDNLDR FT ICAVPGLDAIMIGPDDLTQDLGVPGDMQHPLYQEAVEHVIATCDRHGVPWGFSCQDLAA FT AERWIARGIRWMPFSNDVNALFNTFSQAAAGLHRLAPREETA" FT misc_feature complement(191494..192267) FT /note="HMMPfam hit to PF03328, HpcH/HpaI aldolase family, FT score 1.6e-15" FT CDS complement(192264..193058) FT /transl_table=11 FT /locus_tag="BPP2136" FT /product="putative creatinine amidohydrolase" FT /note="Similar to Synechocystis sp. hypothetical protein FT SLR0596 SWALL:P74740 (EMBL:D90917) (273 aa) fasta scores: FT E(): 2.1e-11, 28.03% id in 264 aa, and to Listeria FT monocytogenes hypothetical protein LMO1968 SWALL:Q8Y5T7 FT (EMBL:AL591981) (247 aa) fasta scores: E(): 3.8e-10, 24.49% FT id in 245 aa" FT /db_xref="GOA:Q7W8J7" FT /db_xref="InterPro:IPR003785" FT /db_xref="UniProtKB/TrEMBL:Q7W8J7" FT /protein_id="CAE37436.1" FT /translation="MRIDQHPYDDIRAYLGKHDTILIPVGAVEQYGAHLATGTELRICE FT GIATEIGARTGLAVAPIVPVNYSAMFLDYPGTLSVEMRTIEDYLKEIGDSLAGQGFRHF FT FFINIHAGSLGPIESVCRHLRRRYDAVGGLIDVFSIMRDMAAGRLKTRQSPSGHASEMV FT TSVALAKFPELVFMERARAAQSLRSFTEGVNTVSSGKVTLGGSSFSVFSDISDYSPIGT FT QGDPTQASAEQGQAIWDATVDYMSEAARKFSAMSFQTEGAKA" FT misc_feature complement(192297..193058) FT /note="HMMPfam hit to PF02633, Creatinine amidohydrolase, FT score 2.8e-10" FT CDS complement(193097..194065) FT /transl_table=11 FT /locus_tag="BPP2137" FT /product="putative exported protein" FT /note="Similar to Agrobacterium tumefaciens hypothetical FT protein ATU5330 or AGR_PAT_473 SWALL:AAK90704 FT (EMBL:AE008955) (318 aa) fasta scores: E(): 3.3e-33, 36.9% FT id in 317 aa. Also similar to BPP2138 (320 aa) fasta FT scores: E(): 5e-46, 48.387% identity in 310 aa overlap" FT /db_xref="GOA:Q7W8J6" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W8J6" FT /protein_id="CAE37437.1" FT /translation="MNPPGILTMKKALLCSLLALPALCFGAYPERPINLIVPFPAGAGS FT DLTARTIAACMESKIPAARFVVLNKPGASGDIGLTALAQAAPDGYTIGLVNTPGVISLP FT IERKTAYTLDSFDFIANLVEDPGTISVHADSPIRTVADLVAAARAKPGAITVGTQGIGS FT AGHISALSLEQAAGIKLTAVPFQGASPASVALLGKVIDGAMTNLGEAITFANGKPWRIL FT GIMSPARSSQAPDIPTFQEAGYTVLGGSMRGLAAPRGIPAAAMAQLTRAVDECNRDDTY FT LTRARNTYQPLRYLKRDEYIKNLQAVDRELRKLWSVNPWQQ" FT misc_feature complement(193127..193924) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 6.2e-29" FT misc_feature complement(193988..194065) FT /note="Signal peptide predicted for BPP2137 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.994) with cleavage site FT probability 0.824 between residues 26 and 27" FT CDS complement(194062..195021) FT /transl_table=11 FT /locus_tag="BPP2138" FT /product="putative exported protein" FT /note="Similar to Agrobacterium tumefaciens hypothetical FT protein ATU5330 or AGR_PAT_473 SWALL:AAL46018 FT (EMBL:AE008955) (318 aa) fasta scores: E(): 1.7e-31, 33.88% FT id in 304 aa. Also similar to BPP2137 (323 aa) fasta FT scores: 48.387% identity in 310 aa overlap" FT /db_xref="GOA:Q7W8J5" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W8J5" FT /protein_id="CAE37438.1" FT /translation="MLLPFRALPGLLAALAIAASASAQSYPDKPITLVVPFPAAGGTDL FT TARLFARALERQAGQPVTVINKPGAGGEIGMAHVARAAPDGYTLGIINTPNVLSIPIER FT RAQFGLDSFVLVANLVDDPATLSVHADQSIHTIADLVETARRQPGGLTYGSAGIGSAGH FT LSMLMFEKAAGVRLQHIPFKGTADVRTALMGRQIDVATANLGEALAYAKGAPWRTLGVM FT SAARSRMAPDLPTFGEAGYPLQSGSLRGIGAPAGMDAQRRGQVATLVARAAADPQFLDD FT ARKAEQEIRVVAGDDYAKVLTDQLAQLQNLWQTSAWNR" FT misc_feature complement(194071..194886) FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 1.1e-36" FT misc_feature complement(194953..195021) FT /note="Signal peptide predicted for BPP2138 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.814 between residues 23 and 24" FT CDS 195228..196127 FT /transl_table=11 FT /locus_tag="BPP2139" FT /product="Putative LysR-family transcriptional regulator" FT /note="Similar to Bordetella pertussis Brg1 SWALL:O30441 FT (EMBL:AF006000) (291 aa) fasta scores: E(): 4.1e-39, 43.9% FT id in 287 aa, and to Pseudomonas aeruginosa probable FT transcriptional regulator PA0816 SWALL:Q9I5C3 FT (EMBL:AE004516) (294 aa) fasta scores: E(): 1e-34, 41.94% FT id in 298 aa" FT /db_xref="GOA:Q7W8J4" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8J4" FT /protein_id="CAE37439.1" FT /translation="MIKELRTLVAVAEHGSITAAAQHIGLTQAAASAQIQRLEESLQAQ FT LFDRVGRQVRLNAAGVDAVARAEHILHLCDELRDAPQRGSLRGHLRLGAIQSMQRQYLP FT RIIEALIGEHPEVSTHLELGGSLPLLTLVDHGKLDAALVVKPFFALPPELKWVPLLQEP FT FKVVCPAGEAGGDWRQILKTLPFIRYDSASFGGRVVDRFLQAHRLVPRCQIQSQDVDAI FT LEMVACGLGAALVPITDGARHQGRIRALDLGEHCFYREVGMVHPVHPRQGGLAMELVRV FT TQAQLRGAPFAHPLLAVE" FT misc_feature 195231..195410 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 4.4e-25" FT misc_feature 195273..195365 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT misc_feature 195474..196088 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2e-32" FT CDS 196219..196794 FT /transl_table=11 FT /locus_tag="BPP2140" FT /product="putative exported protein" FT /note="Similar to Pseudomonas aeruginosa hypothetical FT protein Pa2134 SWALL:Q9I1Y1 (EMBL:AE004641) (190 aa) fasta FT scores: E(): 9.1e-17, 47.13% id in 157 aa, and to FT Deinococcus radiodurans hypothetical protein Dr1385 FT SWALL:Q9RUK1 (EMBL:AE001984) (163 aa) fasta scores: E(): FT 1.4e-05, 30% id in 150 aa" FT /db_xref="InterPro:IPR019825" FT /db_xref="UniProtKB/TrEMBL:Q7W8J3" FT /protein_id="CAE37440.1" FT /translation="MKSLFITGAPCMAVGLAAAGAVQAQTQTQTQPPPVSPAAGVDKLD FT SADRDFLEDAAQAGRLEVEGSKLALEKARATQVKDFAQKMIDDHTKVGVQLDTLARSKG FT YQAPAEPSLVQKVKLQALSLRDEGFDKAYADEIGVAAHEDAVELFTKAAGEAKDPDVKQ FT FATATLESLKAHLEMARTLQQAVAPAKP" FT misc_feature 196492..196512 FT /note="PS00307 Legume lectins beta-chain signature." FT CDS 197016..198731 FT /transl_table=11 FT /locus_tag="BPP2141" FT /product="Putative membrane protein" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 hypothetical membrane protein YbjL or B0847 or FT Z1074 or ECS0927 SWALL:YBJL_ECOLI (SWALL:P75812) (561 aa) FT fasta scores: E(): 4.3e-39, 30.09% id in 555 aa, and to FT Salmonella typhi hypothetical membrane protein YbjL or FT STY0903 SWALL:Q8Z851 (EMBL:AL627268) (561 aa) fasta scores: FT E(): 1.4e-38, 30.75% id in 569 aa" FT /db_xref="GOA:Q7W8J2" FT /db_xref="InterPro:IPR006512" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8J2" FT /protein_id="CAE37441.1" FT /translation="MTIEALADVVRLHPELALFAAIVFGHFIGKIEIRKVSLGTVVGTL FT IAGMILGLLFEPEIPDLLKWAFFDLFLFAVGYSAGPQFFASLKREALPQMALAVVVSCT FT GLAAAIAMVALFRFDPGLSAGLVSGSMTQSAALGSALSAIAAMDVDEATRALLTAHAPL FT ADATTYIFGEVGLILFVTVVAPRLLKVDLRQVAREAEAELQARTDEDDAALWDQAPLSL FT RTYRLENAELDQRTVHEFERRYAAGRLTVTGIRRGDQLLRDVGADARLALGDIVLVASR FT RAGVVGAALEVGTEVDDQELLSEPMVRASIVLTRREMAGKTLGELARGAARGLFLDSLH FT RGESTLPRAMGTRVQRGDVFKLTGSRAAIATAARNLGFIEHDQGRTDLVYLAGGVVVGI FT LFGLLQVRLTGVPLGLGTSGGVLVVGLVAGWLYSRYPVVGHIPEPALRLLSDVGLIVFI FT AAIGLAAGPHAVQAIHEGGIALFAKLVGAGVVVTLAGPIAGLLLGHYVLKLPPVALLPG FT IAGAQTTVATLNALKERGGSDVYAIGFTVPFAVSNVLITLWGPVIVACAVALSR" FT misc_feature join(197043..197102,197121..197180,197208..197276, FT 197301..197369,197511..197579,198177..198233, FT 198246..198314,198351..198410,198453..198521, FT 198540..198608,198651..198719) FT /note="11 probable transmembrane helices predicted for FT BPP2141 by TMHMM2.0 at aa 10-29, 36-55, 65-87, 96-118, FT 166-188, 388-406, 411-433, 446-465, 480-502, 509-531 and FT 546-568" FT CDS complement(198728..199618) FT /transl_table=11 FT /locus_tag="BPP2142" FT /product="Putative LysR-family transcriptional regulator" FT /note="Similar to Pectobacterium carotovorum subsp. FT carotovorum HexA SWALL:O85272 (EMBL:AF057063) (316 aa) FT fasta scores: E(): 1.3e-44, 46.01% id in 276 aa, and to FT Erwinia chrysanthemi Pectinase gene transcriptional FT regulator PecT SWALL:PECT_ERWCH (SWALL:P52662) (316 aa) FT fasta scores: E(): 1.8e-43, 45.87% id in 279 aa" FT /db_xref="GOA:Q7W8J1" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8J1" FT /protein_id="CAE37442.1" FT /translation="MDTLDLDALRTLVVIQEKDGFAAAAVHIGKTQSAVTQQMQRLESQ FT LGRAIFERRGRQKRLTPLGLRLLDYARHLLAVNDEALRSLQQGSLEGVLRIGAPHDVAD FT NMLPPLLAQVARVSPLLQIDIHVGRSPFLMESLHRGEIDMTISNRHDPTLEGVVLRSSP FT TVWLCSASYVLDSAKPIPLVLADGPSLFRRLAQEALDDAGIRWSPSYTSSSLIGIKAAL FT RAGLGVTARGVELLDAEFHVLGETDGLPRLPDVAYYLFVRKNVVRPLTRRVFDMLKSNM FT RLLRSSERSFRADLG" FT misc_feature complement(198773..199360) FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 8.4e-32" FT misc_feature complement(199424..199603) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 1.2e-16" FT misc_feature complement(199526..199549) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 199726..200316 FT /transl_table=11 FT /locus_tag="BPP2143" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q7W8J0" FT /protein_id="CAE37443.1" FT /translation="MTAAAEREQVVQGAIQRIKRIAEAGEFDRAALDGILAELNQLAAR FT ASLWSEADFAAPQDGELQARYLISEDPDQSYALYLNVMRPGKRIVPHNHTTWACISAVD FT GVELNRVYERLDDGSVPGKAQLREIDQVTVEPGTGIALMPDDIHSVEILPGQVIRHLHL FT YGRALETLTARIGYDLEKGTCEIMSIGVQTRRH" FT CDS 200318..201919 FT /transl_table=11 FT /locus_tag="BPP2144" FT /product="Putative transferase" FT /note="Similar to Pseudomonas aeruginosa probable FT thiosulfate sulfurtransferase PA2603 SWALL:Q9I0N4 FT (EMBL:AE004689) (527 aa) fasta scores: E(): 1.3e-73, 45.89% FT id in 499 aa, and to Agrobacterium tumefaciens hypothetical FT protein ATU6089 or AGR_PTI_BX104 SWALL:AAL46325 FT (EMBL:AE009427) (395 aa) fasta scores: E(): 8.6e-41, 44.26% FT id in 314 aa" FT /db_xref="GOA:Q7W8I9" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:Q7W8I9" FT /protein_id="CAE37444.1" FT /translation="MPSIHPIPPTVADMHFINAQTLKSWLHDGAEIALFDVREHGQYGE FT SHLFHGITLPYSRLEADVQRLAPRRQVRLVVYDDGQGIAQAAARRLAALGYGDVHVLEG FT GTPAWQAAGYALFAGVNVPSKTFGELVEQVYDTPHVTAAELDAMLGAGEDVVVLDGRPY FT AEYRKMAIPGATYCPNGELAYRVGKLVPSDKTRIVINCAGRTRSIIGAQTLINLGLPNP FT VAALQSGTQGWMLADLELEHGASRRYGGPSDDIEAARGAAEALARRYEVPMVDAETVRG FT WARDGQRTVFLCDVRTPEEYAAGTLAGAQHTPGGQLIQATDQYVGVRRARLVLFDADGV FT RARVVASWLCQMGHEAYVLEGGLASGLALPAPAPALPRPDEIDAATLAAWLDEGRPLAL FT VDVGASMRYRQAHIAQSRWSIRPLLAAALAGCAEPVVLVADEPGVAACAAAELAVLGVP FT ARVLAGGLQAWIDAGLPVQSSPDIPPDEACVDYLFFVHDRHSGNKAAARQYLEWEVNLI FT SQLDERELGEFRLPRR" FT misc_feature 200381..200653 FT /note="HMMPfam hit to PF00581, Rhodanese-like domain, score FT 0.00013" FT CDS join(201938..203038,203042..203176) FT /pseudo FT /transl_table=11 FT /gene="metC" FT /locus_tag="BPP2145" FT /product="cystathionase beta-lyase (Pseudogene)" FT /EC_number="4.4.1.8" FT /note="Similar to Bordetella avium cystathionine beta-lyase FT metC SWALL:METC_BORAV (SWALL:Q07703) (395 aa) fasta scores: FT E(): 1.4e-67, 48.21% id in 392 aa, and to Escherichia coli FT cystathionine beta-lyase metc or b3008 SWALL:METC_ECOLI FT (SWALL:P06721) (395 aa) fasta scores: E(): 1.4e-56, 41.01% FT id in 395 aa" FT /db_xref="PSEUDO:CAE37445.1" FT misc_feature join(201980..203038,203042..203125) FT /note="HMMPfam hit to PF01053, Cys/Met metabolism FT PLP-dependent enzyme, score 1.1e-107" FT misc_feature 202562..202606 FT /note="PS00868 Cys/Met metabolism enzymes FT pyridoxal-phosphate attachment site." FT CDS 203173..204204 FT /transl_table=11 FT /locus_tag="BPP2146" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Rhizobium loti hypothetical FT protein MLR7142 SWALL:Q987A0 (EMBL:AP003011) (349 aa) fasta FT scores: E(): 1.2e-13, 26.73% id in 303 aa, and to FT Halobacterium sp. succinate dehydrogenase subunit Sdh or FT VNG2106G SWALL:Q9HNH1 (EMBL:AE005100) (318 aa) fasta FT scores: E(): 2.6e-12, 30.44% id in 312 aa" FT /db_xref="GOA:Q7W8I8" FT /db_xref="InterPro:IPR007036" FT /db_xref="UniProtKB/TrEMBL:Q7W8I8" FT /protein_id="CAE37446.1" FT /translation="MNIGQWLREDGGAARRSGRLRVGSMASGVEVFLPYIALRGARPGR FT TLWLHGQVHGDEINGMVAALRFANSLDPAAMSGNLVVTPTGNPQALDARRKRNPYDELD FT LGQSYPGKADGMITERVAHALIEQVRGVADVLINLHTMNPLFDSRPYCVYKTPPNDRVR FT EDDLLAAMAPFFPVLACRQDVGGKGELPGNIAGALDYQCLAAGVCAFMLELGAGNRYQP FT EHIERAEMGFRTLARSMGILPGAPAAEDHAPALRQVSRRGWITADEGGLFVPSYCAGDR FT VPEGASLGEVIALDGTVTPVAPMPREGILIGLRSDPVVHTGERLAFVAWEWRDAPTPAP FT SWR" FT CDS 204259..205251 FT /transl_table=11 FT /locus_tag="BPP2147" FT /product="putative exported protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT RA1058 or SMA1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) FT fasta scores: E(): 4.3e-42, 43.97% id in 332 aa, and to FT Agrobacterium tumefaciens hypothetical protein ATU4727 or FT AGR_L_312 SWALL:AAL45521 (EMBL:AE009401) (329 aa) fasta FT scores: E(): 2.7e-39, 42.46% id in 325 aa" FT /db_xref="GOA:Q7W8I7" FT /db_xref="InterPro:IPR005064" FT /db_xref="UniProtKB/TrEMBL:Q7W8I7" FT /protein_id="CAE37447.1" FT /translation="MTILANFTRRLTLAATLATALAAFGPAAQAAGFPAEGRPVRIVVG FT FPPGGGADVLARAIAPGLAGKLSGNVIVENRPGAGGLTATEYVAKSAPDGYTLYIATPG FT SFTIWPNLRKLNYDPSKDFAPISTLVTMPNLLVVSPSTPYRSVKDVIAAAKAPGGQIDY FT ASGGVATIGQIAGEQFKLMAGLKMTHVPYKGTTPALTDVMGGLVPLTFCDPSAKGMIDS FT GKLRLLAVTTSKRSPLFPDTPTMDEAGVPGYDLMNWYGIVAPAGTPAEVVQRLNDALVE FT VMAQPEVVQRLAAAGMEATSSAPDGFGRLMATERAKWGKLVEQANMRAE" FT misc_feature 204259..204348 FT /note="Signal peptide predicted for BPP2147 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.997 between residues 30 and 31" FT misc_feature 204421..205239 FT /note="HMMPfam hit to PF03401, Uncharacterized protein FT family, UPF0065, score 6.8e-101" FT CDS 205312..207651 FT /transl_table=11 FT /gene="bisC" FT /locus_tag="BPP2148" FT /product="Putative biotin sulfoxide reductase" FT /note="Similar to Mycobacterium tuberculosis BisC or Rv1442 FT or MTCY493.12c or MT1487 SWALL:O06817 (EMBL:Z95844) (766 FT aa) fasta scores: E(): 2.2e-150, 51.63% id in 765 aa, and FT to Escherichia coli biotin sulfoxide reductase BisC or FT B3551 SWALL:BISC_ECOLI (SWALL:P20099) (777 aa) fasta FT scores: E(): 8.1e-71, 38.18% id in 770 aa" FT /db_xref="GOA:Q7W8I6" FT /db_xref="HSSP:1EU1" FT /db_xref="InterPro:IPR006657" FT /db_xref="UniProtKB/TrEMBL:Q7W8I6" FT /protein_id="CAE37448.1" FT /translation="MSSASDSAPSASRPGDPEHPHSAHWGAFYAAFDGQAVRVRPHPDD FT PDPSPLIDNFTNALRHPVRVTAPMVRRGWLERGPGADQARGADEFVAVSWDEALDLVAR FT ELARVRDAHGPQAVFGGSYGWSSAGRFHHAQSQVHRFLNTALGGYVRSVNNYSAGASAV FT ILPHVLGPLDDVARRNVTWQQIVEHTDVVLAFGGMALRNTQVASGGVSRHTERGAMRAA FT ARRGCRFVCISPLRDDLPEEAAASWLPARPGTDAALMLALLHVLVDEGLHDRAFVARYC FT AGWETFEDYLMGRADGQPKNPAWAAALTGLAEADIAALARMLPSRRVLVVVSHSLQRAE FT HGEQPVWLGAVLAAALGQVGLPGGGYNYALGTLAHYGKRNNAVPIAALPQGRNGVDAYI FT PVARIADMLLKPGEPFDYNGQRLRYPHVRLAYWAGGNPFHHHQDLARLRAAFRRLDTLI FT VHETVWTATARHADIVLPCTMTLEREDIGGTPTDPLLVAMHRVAPPVGLARDDYDIFAD FT LAGRLQRRAAFTEGRDSRGWLRHIYETTRAALAARGDEAPDFDTFWARGELRLPQADDD FT GGLLRAFRQDPQGRPLPTPSGRIQVSSPTVASFGYADCPGHPAWLAPADAPDAQWPLYL FT VANQPATRLHSQLDFGAHSAAAKRHGREVCQVHPADAAARGIADGDVVRLFNARGACLA FT AARVTDAIMRGVVQLPTGAWYDPQDVHAERPMCMHGNPNVLTRDVGTSSLAQGCTGQLT FT AVQMERYDGPLPPVRAYEPPVPAARG" FT misc_feature 205345..207123 FT /note="HMMPfam hit to PF00384, Molybdopterin FT oxidoreductase, score 5.6e-110" FT misc_feature 207208..207573 FT /note="HMMPfam hit to PF01568, Molydopterin dinucleotide FT binding domain, score 2.1e-40" FT misc_feature 207325..207408 FT /note="PS00932 Prokaryotic molybdopterin oxidoreductases FT signature 3." FT CDS complement(207664..208464) FT /transl_table=11 FT /locus_tag="BPP2149" FT /product="Conserved hypothetical protein" FT /note="Similar to Pyrococcus abyssi hydrolase related FT PAB1449 SWALL:Q9UYV8 (EMBL:AJ248287) (262 aa) fasta scores: FT E(): 2.4e-20, 37.11% id in 229 aa, and to Pseudomonas FT aeruginosa hypothetical protein PA2074 SWALL:Q9I241 FT (EMBL:AE004634) (270 aa) fasta scores: E(): 3.1e-19, 34.44% FT id in 270 aa" FT /db_xref="GOA:Q7W8I5" FT /db_xref="InterPro:IPR003010" FT /db_xref="UniProtKB/TrEMBL:Q7W8I5" FT /protein_id="CAE37449.1" FT /translation="MTPTGKIAAIQFDVRQGENDANRARSCELARQAAAAGANLIVLPE FT CCVGGLVFDSRDEIRAVSETVPGPSTRAWSQVSRETGAWIVAGLSETDGAKIYNTAVLV FT GPNGELHRHRKLHVRGIEQRLFDVGDALTCVDTPLGRIGLAICYDMWFPEVCRNYALDG FT VDVVAAPANWSKSVRTADAFDAYGLPQGYHLMAATAVSNELVVVAADRVGTERGVAFLG FT TSCIFGPSGEEQILLADWPDIAAVRAQGGPHLGQRQPAVYPVTR" FT misc_feature complement(207679..208455) FT /note="HMMPfam hit to PF00795, Carbon-nitrogen hydrolase, FT score 6.8e-51" FT misc_feature complement(207976..208038) FT /note="PS01227 Uncharacterized protein family UPF0012 FT signature." FT CDS complement(208478..209230) FT /transl_table=11 FT /locus_tag="BPP2150" FT /product="Putative amino acid ABC transport system, FT ATP-binding protein" FT /note="Similar to Streptococcus pneumoniae branched-chain FT amino acid ABC transporter, ATP-binding protein SP0753 FT SWALL:Q97RP6 (EMBL:AE007382) (236 aa) fasta scores: E(): FT 1.6e-28, 42.24% id in 232 aa, and to Pseudomonas aeruginosa FT high-affinity branched-chain amino acid transport FT ATP-binding protein BraG or PA1070 SWALL:BRAG_PSEAE FT (SWALL:P21630) (233 aa) fasta scores: E(): 5.2e-28, 42.66% FT id in 225 aa" FT /db_xref="GOA:Q7W8I4" FT /db_xref="HSSP:1JI0" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8I4" FT /protein_id="CAE37450.1" FT /translation="MPDTAPCLELAGFSAGYTDTPIVRDISLTIPAGTVTTLLGGNGAG FT KSTLLKAIFGMVRQFGGAIRFEGRPIDRLACDARLRAGIGIVPQGRCNFPRMSVGENLE FT MGAYLLGRADKQRAMEEVLALFPMLKRKYHSLAGNLSGGEQQILETAMVLEMHPRLLLL FT DEPSLGLSPKMQQEVFDSVQEIRGAGLTVMMVEQNLHGALLISDTAVVLETGRKFKEGP FT ARQIMNDPDIKRAYLGATEDETAPATVH" FT misc_feature complement(208586..209134) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1e-46" FT misc_feature complement(209090..209113) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(209223..210026) FT /transl_table=11 FT /locus_tag="BPP2151" FT /product="Putative amino acid ABC transport system, FT ATP-binding protein" FT /note="Similar to Synechocystis sp. high-affinity FT branched-chain amino acid transport ATP-binding protein FT BraF or SLR0467 SWALL:Q55164 (EMBL:D64001) (267 aa) fasta FT scores: E(): 1.3e-32, 47.05% id in 255 aa, to Pseudomonas FT aeruginosa high-affinity branched-chain amino acid FT transport ATP-binding protein BraF or PA1071 FT SWALL:BRAF_PSEAE (SWALL:P21629) (255 aa) fasta scores: E(): FT 6.6e-29, 40.87% id in 252 aa, and to Escherichia coli, and FT Escherichia coli O157:H7 high-affinity branched-chain amino FT acid transport ATP-binding protein LivG or B3455 or Z4825 FT or ECS4302 SWALL:LIVG_ECOLI (SWALL:P22730) (255 aa) fasta FT scores: E(): 6.4e-25, 36.5% id in 252 aa" FT /db_xref="GOA:Q7W8I3" FT /db_xref="HSSP:1G9X" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8I3" FT /protein_id="CAE37451.1" FT /translation="MKAPTPNTPALSVRGLAKAFAGVRAVDGLDFDVPAGSVTGLIGPN FT GCGKSTSIDCISGFQPPDAGRVQLAGADIGGLPPHAIARRGLTRTFQNIRLYDELTVRE FT NLLIAAQEYDGHGWLDAFLNRRALRDSEAAAGERARELIAEVGLSRYDSLPAGILSYGQ FT KKLVALAACLMSRPSVAILDEPLAGVNPTMIANIERIIDDLNRAGQTFLIVEHNMNFVM FT RRCHQVVVMESGRKLVEGAPSIIRSDERVVNAYLGSAPQEESHHA" FT misc_feature complement(209325..209921) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 8.8e-55" FT misc_feature complement(209508..209552) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(209877..209900) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(210023..211027) FT /transl_table=11 FT /locus_tag="BPP2152" FT /product="Putative amino acid ABC transport system, FT membrane protein" FT /note="Similar to Rhizobium leguminosarum integral membrane FT protein Bra2E SWALL:Q8VM84 (EMBL:AJ427840) (331 aa) fasta FT scores: E(): 5.8e-35, 40.39% id in 307 aa, and to FT Archaeoglobus fulgidus branched-chain amino acid ABC FT transporter, permease protein AF0824 SWALL:O29434 FT (EMBL:AE001047) (323 aa) fasta scores: E(): 1.5e-27, 31.51% FT id in 311 aa" FT /db_xref="GOA:Q7W8I2" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8I2" FT /protein_id="CAE37452.1" FT /translation="MKEQTLDLPLGVASRRRAAPWLLAGALVLLALPFAGLGGYALKVA FT IMAIVFAVLATSLNLIYGFTGLLSFAQIAFWGIGGYTAALLAVDAHWSPWLGVLAGGAV FT AVAASLVIGYASLRLSRHSFAIVTLSLVLLMQLVAKDWVDLTRGPLGIPNLPTLELALP FT GLGQLSSANPLVFYFIMLAFAVLALAGVHRLVGSRIGRTLLAIKQNEPLTQSQGVATLR FT YKLLAFAVSALVAGMTGGLFVFYLSVVDPSIFDFYYTQMILIMVIIGGTGSFWGVIAAS FT AVFTIIPELLRVSPDLRLVLLGCVLVAAILALPQGIAGYFRERRLERIRRTLR" FT misc_feature complement(210062..210919) FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 2.6e-18" FT misc_feature complement(join(210071..210136,210176..210241, FT 210287..210352,210440..210505,210611..210661, FT 210677..210742,210758..210808,210824..210889, FT 210902..210967)) FT /note="9 probable transmembrane helices predicted for FT BPP2152 by TMHMM2.0 at aa 20-42, 46-68, 73-90, 95-117, FT 122-139, 174-196, 225-247, 262-284 and 297-319" FT CDS complement(211024..211896) FT /transl_table=11 FT /locus_tag="BPP2153" FT /product="Putative amino acid ABC transport system, FT membrane protein" FT /note="Similar to Deinococcus radiodurans branched-chain FT amino acid ABC transporter, permease protein DR0281 FT SWALL:Q9RXM9 (EMBL:AE001889) (285 aa) fasta scores: E(): FT 4.6e-31, 34.64% id in 280 aa, and to Brucella melitensis FT high-affinity branched-chain amino acid transport system FT permease protein LivH / high-affinity branched-chain amino FT acid transport ATP-binding protein LivG BMEII0874 FT SWALL:Q8YBM5 (EMBL:AE009721) (916 aa) fasta scores: E(): FT 2.9e-30, 37.67% id in 292 aa" FT /db_xref="GOA:Q7W8I1" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8I1" FT /protein_id="CAE37453.1" FT /translation="MTDFILQLIINGLAIGAIYALVAVGLSLIYGVLEIVNFAHGELVM FT LGGFAAFFAVSTLGLGYWPSILVATLLVAAAGLLLFDSVLFTLKSDDFQKGILLTLGLA FT MIIQNGALYLLRATPRTITTEYGFDAFQVGNLSIGVLRLIAFCLAIAAIVLLHAFLKWT FT RSGKSMRALAQNREAALMVGMRPRTIARTVFVLGAALCGLAGGVLAPLYTVHPLMGMPF FT VFKAFAIIIIGGLGNIWGAIIAALIVGMTESLAGGFGSVVLQDALAFIIMILILLVRPL FT GLFGKGMRV" FT misc_feature complement(211033..211884) FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 2.9e-38" FT misc_feature complement(join(211063..211128,211150..211215, FT 211261..211317,211417..211482,211543..211608, FT 211636..211701,211732..211797,211819..211884)) FT /note="8 probable transmembrane helices predicted for FT BPP2153 by TMHMM2.0 at aa 4-26, 33-55, 65-87, 96-118, FT 138-160, 193-212, 227-249 and 256-278" FT CDS complement(211961..213100) FT /transl_table=11 FT /locus_tag="BPP2154" FT /product="Putative amino acid ABC transport system, FT substrate-binding protein" FT /note="Similar to Fusobacterium nucleatum subsp. nucleatum FT ATCC 25586 leucine-, isoleucine-, valine-, threonine-, and FT alanine-binding protein FN1432 SWALL:AAL95625 FT (EMBL:AE010648) (383 aa) fasta scores: E(): 3.7e-25, 29.88% FT id in 348 aa, and to Pseudomonas aeruginosa leucine-, FT isoleucine-, valine-, threonine-, and alanine-binding FT protein precursor BraC or PA1074 SWALL:BRAC_PSEAE FT (SWALL:P21175) (373 aa) fasta scores: E(): 1.3e-21, 27.37% FT id in 358 aa" FT /db_xref="GOA:Q7W8I0" FT /db_xref="InterPro:IPR000709" FT /db_xref="UniProtKB/TrEMBL:Q7W8I0" FT /protein_id="CAE37454.1" FT /translation="MNASKRLALAATLAATLAATGAIAQPIVVGVSTPLSGSAAFQGQH FT DRWGAELAVEQINAAGGVLGRPLQLNVQDNACNPAEGVNSVGRMLENRDLVAVSGAMCS FT SVTLALMPIVERASVPMLVSSSSAASITEKAGAGGNIWTFRAGPSDDSMAVALATYLKD FT EARFKKIAVLGENTDYGRGGAAAIAKALKPLGVTITSSEYYDKGTQDFTTVLTRLKLAA FT PDAIALYTVGADQINFIRQYRGFGMRVPLTGRIELGSLQAEGIKSGAINGATSVFQYAA FT ELDTPANQAFVKAYKEKYKEDPLLQSAISYENIQLLADAIKRAGSVDRKAVRDAIQASD FT YASMMGGRVAFDKNNQAHNNAVILKVEDGKVKVVATPGT" FT misc_feature complement(213029..213100) FT /note="Signal peptide predicted for BPP2154 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.967 between residues 24 and 25" FT CDS complement(213254..213574) FT /transl_table=11 FT /locus_tag="BPP2155" FT /product="Putative exported protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q7W8H9" FT /protein_id="CAE37455.1" FT /translation="MKTMQAALAAALMAATAGAGAQYVIDVQDMNGAWKKADPNAVGLT FT NLQIATGAAQQQCVDRGIPGEQKRAANVIDKTTGVVIEEIDCAAWRKQAEILARKAAAS FT RH" FT misc_feature complement(213512..213574) FT /note="Signal peptide predicted for BPP2155 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.493 between residues 21 and 22" FT CDS 213865..214068 FT /transl_table=11 FT /locus_tag="BPP2156" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q7W8H8" FT /protein_id="CAE37456.1" FT /translation="MTASVLNYTLRQTSQPTEAQRRALRTLETARQLMAESGATPPAAD FT PVSTEAELVAYLNQRYARPANR" FT CDS 214189..215490 FT /transl_table=11 FT /locus_tag="BPP2157" FT /product="Putative UDP-N-acetylglucosamine FT 1-carboxyvinyltransferase" FT /EC_number="2.5.1.7" FT /note="Similar to Borrelia burgdorferi FT UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA or FT BB0472 SWALL:MURA_BORBU (SWALL:O51428) (427 aa) fasta FT scores: E(): 1.8e-47, 32.55% id in 430 aa, and to FT Escherichia coli udp-N-acetylglucosamine FT 1-carboxyvinyltransferase MurA or MurZ or B3189 FT SWALL:MURA_ECOLI (SWALL:P28909) (419 aa) fasta scores: E(): FT 7.2e-29, 30.07% id in 429 aa" FT /db_xref="GOA:Q7W8H7" FT /db_xref="HSSP:1DLG" FT /db_xref="InterPro:IPR005750" FT /db_xref="UniProtKB/TrEMBL:Q7W8H7" FT /protein_id="CAE37457.1" FT /translation="MSNLIVHGGKPLRGRITPSANKNAVLPVLCATLLTSEPLRLHRVP FT DITDVRKILDIFRMLGSEVRMDHATDTLELHHRATRFDAATHRLPEEMRSSIMLVPPLL FT ARFGVARLEDNVKGCTLGVREIDPHVDVFCRFGGAVTRAEGSLLVHSAGDLVPNDHWLD FT YASVITTENFVLCAAAAPGVSTLTNAASEPHVQEFCRFMTLMGVRIEGIGTSRLTVHGG FT GALGGGEFTFDEDFHEITTFLALGAITGGDVAVRNSAPGNFPLIDRTFAKFGVRITHED FT GWSRASTPGSLQVQTPFTSNVLTKVEAAPWPYFPVDLLPIFIALGVRARGNAMFWNKVY FT DGAMGWTGELSKFGAHVFLSDPHRLITFGGSPLTPASVESPYIIRVAIALFMVAASIEG FT RSEIRNATPIRRAHPRFVENLRSLGVEVEWESEE" FT misc_feature 214204..215448 FT /note="HMMPfam hit to PF00275, EPSP synthase FT (3-phosphoshikimate 1-carboxyvinyltransferase), score FT 7.2e-20" FT CDS complement(215531..216073) FT /transl_table=11 FT /locus_tag="BPP2158" FT /product="Conserved hypothetical protein" FT /note="Similar to Pseudomonas aeruginosa hypothetical FT protein PA2301 SWALL:Q9I1H4 (EMBL:AE004656) (180 aa) fasta FT scores: E(): 9.6e-41, 66.1% id in 177 aa, and to FT Streptomyces coelicolor conserved hypothetical protein FT SCBAC36F5.22c SWALL:Q93IV9 (EMBL:AL592292) (185 aa) fasta FT scores: E(): 7e-19, 43.5% id in 177 aa" FT /db_xref="InterPro:IPR007214" FT /db_xref="UniProtKB/TrEMBL:Q7W8H6" FT /protein_id="CAE37458.1" FT /translation="MRAMSLSDHAEKFSFDIIAAEQRAARLPACVAAGLPDGLLVFAVD FT DAHSDTAQFSERYGFGLQDCANTLVLRYRKDGGEHYAAVVALGDRRLDVNGAAKARLGA FT QRLSFARREDATALTGMEFGGITAFGLPAGWPILVDEAVMRRPHVVMGAGVRTAKLLLA FT PAQLRALPGVDVAALSV" FT CDS complement(216118..217968) FT /transl_table=11 FT /locus_tag="BPP2159" FT /product="ABC transporter, ATP-binding protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0872" FT /db_xref="GOA:Q7W8H5" FT /db_xref="HSSP:1MV5" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q7W8H5" FT /protein_id="CAE37459.1" FT /translation="MAGPWQMARNKLDLRGSAFKAVLGFTFRHWARQPWRIGLIAMLAL FT LSALADILTPLYVGRLIDAVAGGAPADTVARNAALGAFWLLIALGVGATLLRQAIFMNI FT IALTLKMMHDIAGLAFHQVQRLSSDWHANTFAGSTVRKITRGMWALDLLNDTLLIALLP FT SLVMLAGATALLGWHWPLMGLVVGLGSLLYVAVTMALSLGYVAPAARLGNAWDTRMGGA FT LADAVSCNAVVKAFGAEWREEARLARVTGKWRHRTRRGWVRGTINGGVQGAMLVAMQAA FT ILGVALLLWQRGQASVGDVTFAFTTFFMLQGYLRDVGMNIRNLQRSINDMEELVSLQRQ FT PLDVEDLPGAGPIDIGAGEIRFENVTFRYGPHEQPLYRDFSVRIAPGERVGLVGHSGSG FT KTTFIKLIQRLYDVDGGRITIDGQDIAAVRQASLRSQIAIVQQDPVLFHRSLAENIAYG FT RPGATQAEIERAARLASAHDFIMALPKGYDTLVGERGVKLSGGERQRVAIARAFLADAP FT ILILDEATSSLDSESEVLIQRAMERLMEGRTTLVVAHRLSTVRALDRLLVMDRGRVIEE FT GSHEALIRLHGGVYRRLFERQALELTRGLSQWELGGAAAS" FT misc_feature complement(216256..216810) FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2e-62" FT misc_feature complement(216433..216477) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(216766..216789) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(217027..217860) FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region, score 2.9e-08" FT misc_feature complement(join(217099..217164,217351..217416, FT 217432..217497,217666..217731,217792..217857)) FT /note="5 probable transmembrane helices predicted for FT BPP2159 by TMHMM2.0 at aa 37-59, 79-101, 157-179, 184-206 FT and 268-290" FT CDS 218349..219008 FT /transl_table=11 FT /gene="tpm" FT /locus_tag="BPP2160" FT /product="thiopurine S-methyltransferase" FT /EC_number="2.1.1.67" FT /note="ortholog of Bordetella pertussis (BX470248) BP0873" FT /db_xref="GOA:Q7W8H4" FT /db_xref="HSSP:1PJZ" FT /db_xref="InterPro:IPR016822" FT /db_xref="UniProtKB/Swiss-Prot:Q7W8H4" FT /protein_id="CAE37460.1" FT /translation="MDADFWLDRWREGRTHFHQTRVTPLLQKYWPALDVPAGGQVLVPL FT AGKSLDMVWLAGQGLRVLGVELSQLAVEQFFDENGLRPEIHQSAQGRHYVAGNLELICG FT DVFALEDATLAACAGVYDRAALVALPEPMRKRYAREVYGRLGRGCRGILITLDYPQDQM FT EGPPFSVDDAEVQALYAGHTEARLIDRRDILDKEPKFNQRGVARLDTLVYRLERLG" FT CDS 219096..219251 FT /transl_table=11 FT /gene="vir-18" FT /locus_tag="BPP2161" FT /product="vir-repressed protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0874" FT /db_xref="UniProtKB/TrEMBL:Q7W8H3" FT /protein_id="CAE37461.1" FT /translation="MGMKSILGLLLAAALLGGCAVYTPHGAVVVDPPDRGGGGFCPPGQ FT AKKGNC" FT misc_feature 219111..219179 FT /note="1 probable transmembrane helix predicted for BPP2161 FT by TMHMM2.0 at aa 29-51" FT misc_feature 219120..219152 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 219360..219527 FT /transl_table=11 FT /locus_tag="BPP2162" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0875" FT /db_xref="UniProtKB/TrEMBL:Q7W8H2" FT /protein_id="CAE37462.1" FT /translation="MKFCMATLMLAASLALAGCAGGQGSQPGPPHPGAVNPYSSGGFHD FT AGPDYPDTGR" FT misc_feature 219360..219425 FT /note="Signal peptide predicted for BPP2162 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.610 between residues 22 and 23" FT misc_feature 219384..219416 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(219539..220105) FT /transl_table=11 FT /locus_tag="BPP2163" FT /product="putative lipoprotein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0876" FT /db_xref="UniProtKB/TrEMBL:Q7W8H1" FT /protein_id="CAE37463.1" FT /translation="MREEQVPGGARLIYRDAALKPRQYTAMWLSPVEYYPSPQPSAQVS FT METLTELQNYLDQSLRRKIGREIRLVNGPGPGVAKARIAITAVGSESEALAAYQYIPVA FT LAITGARAVLEGGRPQQATIAIESKVTDSQTGQLLWASVRGGTGERVRAIAQGQASVPA FT EALKPLIDEWTDNVAREIRNYVRSK" FT CDS 220501..221217 FT /transl_table=11 FT /locus_tag="BPP2164" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0877" FT /db_xref="InterPro:IPR009926" FT /db_xref="UniProtKB/TrEMBL:Q7W8H0" FT /protein_id="CAE37464.1" FT /translation="MPDAHDPYLVSGRFEIANLLQTLQARQCLLLMRIPGRPFNSVTSV FT LHVDAQAGQVVLDAAQDDTLNQRLADAGDVAFDTSLDNISISFAAARVTRCEFEARPAL FT LVDLPETLTRVQRRDTFRIAVPVAQPATWVREAGGAEPLALCDISPGGLALADPQQTLD FT PAPGKIYRGVLALPELGAFAAAIRVVHHLDEVLAKGKTSRRIGCAFVELDKGTGIRIQA FT YVNALQRDQIARQRGL" FT CDS complement(221233..222534) FT /transl_table=11 FT /locus_tag="BPP2165" FT /product="putative phospholipase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0878" FT /db_xref="GOA:Q7W8G9" FT /db_xref="InterPro:IPR003187" FT /db_xref="UniProtKB/TrEMBL:Q7W8G9" FT /protein_id="CAE37465.1" FT /translation="MQVPDPRSPFIRPALAGALALALAGMSLPALAGISYRLDRPAAAP FT GETVRLEAVFFNDGSASAAWNAPQQLVLQWRGADGQTIRSLAQRPAGEAALNIPVNNFA FT RMSWDAVVPVHARGLQAVSIEGESTMLALDATGREQDTLASTPADVPVPDARTGQPLPP FT AAVTAAGVSPDSGPAPAQVAVSQTFQPASAFDVFRSAISEYQPMYFDIGTREQTTARFQ FT ISAKYRLFSPKGDRPATFGENFYLGYTQTSLWDLEGDSKPFIDTTFNPSAFWLSDNIWS FT SASQNWRVGLNTGVEHQSNGKSGNDSRSLNDAYVQPALNYRFDSGSTLTFAPKVKTYFG FT VARENRDYADYAGYVDWNLRWAQDGGAVVSAMYRQGASSRRTTQLDFAWPLKRTWLDMN FT GYLHLQYFNGYGETLLGYDQRHDSQFRIGLSLVP" FT misc_feature complement(222439..222534) FT /note="Signal peptide predicted for BPP2165 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.999 between residues 32 and 33" FT CDS complement(222669..224171) FT /transl_table=11 FT /locus_tag="BPP2166" FT /product="probable aldehyde dehydrogenase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0879" FT /db_xref="GOA:Q7W8G8" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q7W8G8" FT /protein_id="CAE37466.1" FT /translation="MDTPSDLLRKLGLDPAALAQGSLRARSPIDGALLARVPEHSVAQA FT HAAITRARQASQQWRDVPAPRRGELVRRFGDVLREHKEALGRLVSLEAGKILAEGAGEV FT QEMIDICDFAVGLSRQLYGLTIASERPGHRMMETWHPLGVVGVISAFNFPVAVWSWNAA FT LALVCGNAVVWKPSEKTPLTALACQALLARALQDYGEAPAGLAEVLIGGRQLGEALVDS FT HDVALVSATGSTRMGRQVGPRVAQRFGRVLLELGGNNAIIVAPSADLEMATRGIVFGAI FT GTAGQRCTTTRRLIAHTDIADTLVARLKQAYASATVGDPLQPGTLVGPLIDRAAYDAMQ FT AALTAAREQGGQVSGGERLLAERYPDAWYVRPAIVEMPGQTDVVCHETFAPILYVMRYG FT DFPAALAMHNGVPQGLSSAIFTNDLREAEAFLSSAGSDCGIANVNIGTSGAEIGGAFGG FT EKETGGGRESGSDAWKHYMRRATNTVNYSRALPLAQGIRFGE" FT misc_feature complement(222714..224126) FT /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase FT family, score 3e-132" FT misc_feature complement(223392..223415) FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT tRNA 224353..224429 FT /note="tRNA Arg anticodon TCT, Cove score 90.16" FT CDS 224690..227578 FT /transl_table=11 FT /locus_tag="BPP2167" FT /product="putative exported protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0880" FT /db_xref="GOA:Q7W8G7" FT /db_xref="InterPro:IPR006674" FT /db_xref="UniProtKB/TrEMBL:Q7W8G7" FT /protein_id="CAE37467.1" FT /translation="MAPARVCKMGNGARRLRGWPVRLLIAGLAVAAIFLVAAVLIALSW FT MNSRNLLLDAAARTANDAAQITFERTRRMIEPASATLRTLSFDPIVSAPRLQDRLERMR FT LLAEELAANPLISALYVGYDNGDFLLARMLDDPGIRQHFGAPGQARFLVQTVTRAADGT FT AKGDFLFYDGGLSPITRRSEADYRYDPRERPWYANAGEGAALTISAPYVFFSTRQVGVS FT LSRRAEGGKAIVGLDIVLDDLGRMLDELRITPSAELALVDGSGAVVAYRDPQVLTARAQ FT AAGDTHLRPLDDLGVEPLSDLRRIARDGRPVSYDVAGHEWLGVMLPFDGFDNVDLRLLL FT TAPADELLGDLQHDRQRMVLITGGLILLFLGLGWWGGSRIGRALERTTAQAKRMSAFDF FT SRPPDAPAWLRETRELNGVMDNVSNTVEAFLAISDVLGAEPRIETMLAQVLEKFVHATR FT CRSGAIYLLQKDSRTMARAAVAGDAHGLEESLPCAGGGDAAPAAGAADGLQRVQFELRS FT RAGRVEGLLVLRHAQDQDHAAPGFQAFAFRLTGMLSAAIETRQLIESQKQLFDAVIRVL FT ADAIDAKSPYTGGHCERVPALAIMMTDRMCADTSGPYADFTFTEDERYAFYLAAWLHDC FT GKITSAEHIVDKATKLEVIYNRIHEIRMRFEVLWRDAEIAHLRACLDGQPAAASAQARD FT ERQAQLQDDFRFVAECNLGGEFLADEAIERLRRLGQATWLRHFDDGLGLAAAERRRLEG FT SRAGAPALPAIEPLLADKPQHRVEWGDNKPAVERDDPRNALGFDMKLPAYRQDMGELHN FT LSIRRGTLTDEDRFAINDHIVQTLIMLKQLPWPRHLERVPDIAANHHEKMDGTGYPRRL FT PGEALHLTERVMAVADVFEALTAADRPYKLPKTLSESLRIMAVMCKERHLDTELYLYFL FT RHRIWLAYAQQHMNPSQIDDVDIEALARIAQG" FT misc_feature 224690..224800 FT /note="Signal peptide predicted for BPP2167 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.758) with cleavage site FT probability 0.228 between residues 37 and 38" FT CDS 227802..229154 FT /transl_table=11 FT /locus_tag="BPP2168" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0882" FT /db_xref="GOA:Q7W8G6" FT /db_xref="InterPro:IPR005656" FT /db_xref="UniProtKB/TrEMBL:Q7W8G6" FT /protein_id="CAE37468.1" FT /translation="MNITQEIAKRVVQTSIRDLPADAVGYSETLAMSALGAMAAGHRSA FT GGREIVDYVKSAGGAAQATVLGHGLKTSMEMAGLANGTFAHATEYEDDSFPEAVSSYTL FT FPAIFAVAEHAQASGARVVEAFAAGYEAQARIGLACRQARRNGFMVLSLAGSIGCAASA FT AKLLGLDERQTTMALSLAASQGAGIGYQTGSMAHIVEMGFAARNGIAAALMAAQGMTGQ FT PDVLEAPRGLMNMITGDQVEAPAAIIEHWGRPYRLMEIGIKSYPCCYHLQRIIETTVDL FT RHAEGLAAADIEEISVEVNAFFPTVVQHMEPHDEIEAQFSLPHVLAIAMLEDQVVPAGF FT SQARIDDAAFQVFRRKVKQVVREDWGWTPTGWTPRITYRLADGRVIVREPEQARGQPPA FT LLTFDQCVPKYLGCVQGIYPEQQVERSIALLRGLAGLDSVAELMRCLATPA" FT CDS 229183..229695 FT /transl_table=11 FT /locus_tag="BPP2169" FT /product="biotin carboxyl carrier protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0883" FT /db_xref="GOA:Q7W8G5" FT /db_xref="HSSP:1A6X" FT /db_xref="InterPro:IPR000089" FT /db_xref="UniProtKB/TrEMBL:Q7W8G5" FT /protein_id="CAE37469.1" FT /translation="MLVVKTKFSDLTHEDIDRILEIVNRVDDIDLQIQVDGLGLRVRKG FT NVGAPVALPAVSAPAAAEAPAPAPSPAPAAQPAVAAAAAPAAARQDLLSITAPMIGRFY FT AKPSPNDPAFVALGSQVGPDDSVCILEVMKLFNTVKAGVAGEIVEILVQEGDMVEEGDV FT LFRVKPQ" FT misc_feature 229459..229683 FT /note="HMMPfam hit to PF00364, Biotin-requiring enzyme, FT score 2.6e-21" FT CDS 229692..231146 FT /transl_table=11 FT /locus_tag="BPP2170" FT /product="probable carboxylase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0884" FT /db_xref="GOA:Q7W8G4" FT /db_xref="InterPro:IPR000891" FT /db_xref="UniProtKB/TrEMBL:Q7W8G4" FT /protein_id="CAE37470.1" FT /translation="MSRRIGIIDTTLRDAQQCLWATRMTAGMMDPIAQALDEAGFDMID FT FMAPVQFDVCVRYLREDPFEKARHFRKRFRNTPMRSYCRSKSLVGFSMVPDDMVELWID FT CLAANGFSAVGTLDSLLDVDNMKVSVGRAKKIGIKSIGALVFCESPLHTDALYAGTAAE FT LVRCGVDGIMLKDSGALLTIERIRTLIPALRAAVGDIPIEVHSHSNTGLVQRVYLDAAD FT LGIDQLHTSIAPLAGGVAQPSIQNMTRNLAQRGYRTDVDMARVEEISAYLHRLAARYDF FT PLGKPMEYDEFHYRHQMPGGMTENWRFQLRQAGLENRFEEILEEIGRVREDLAWPIMVT FT PFSQIIGVQAMLNVVNGERYRAVPDEVKMYALGHFGRLLGPVEPNALDRIVANGSPDVG FT LTPQPKDPALPGLRKANPGMTDEELLLRYMFPADDVEATLGCKPLKLTVPAGGPIVRLI FT EEILPRAGIRHFELRSQSEHISFTRP" FT misc_feature 229722..230543 FT /note="HMMPfam hit to PF00682, HMGL-like, score 3.2e-09" FT misc_feature 230229..230258 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature 230571..231095 FT /note="HMMPfam hit to PF02436, Conserved carboxylase FT domain, score 1.2e-11" FT CDS 231181..231489 FT /transl_table=11 FT /locus_tag="BPP2171" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0885" FT /db_xref="UniProtKB/TrEMBL:Q7W8G3" FT /protein_id="CAE37471.1" FT /translation="MTQPAASSHAVIVMYDAPAELDAWMHGDHYREVLATPGVTGVRRY FT EVLDGPQACRKYLAVIETDDLDATLAWRDSEAGARSQQDANQRGVANRLGLTCRRIY" FT CDS 231535..232410 FT /transl_table=11 FT /locus_tag="BPP2172" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0886" FT /db_xref="GOA:Q7W8G2" FT /db_xref="InterPro:IPR006992" FT /db_xref="UniProtKB/TrEMBL:Q7W8G2" FT /protein_id="CAE37472.1" FT /translation="MIMPPILDMRLRPPVPAWTKGSVFRTAMHYPRHNLTFKGARSAWL FT EDVGLLFEEMDSAGIRYGVAMGRASSGAGNLGGVANQDIVDLLATYPDRFLGFLGVDLD FT NIAGSLAEIRELAGAPGVKGISIEPGSARVPRWSDDKTLDPVYELALELKLPVSISLSG FT LLSALAGHDITWSSPVSIQRVAQRYPDLKIVVSHAAWPYADEMVVVALACPNIYVSPDL FT YASTRGMICADSYVKGANMFLEDRTLFGTAYPVKDIQDSLRDFLQLGWREDIIHKVLWT FT NAARLLGVDK" FT CDS 232436..233491 FT /transl_table=11 FT /locus_tag="BPP2173" FT /product="conserved hypothetical protein" FT /note="ortholog of Bordetella pertussis (BX470248) BP0887" FT /db_xref="GOA:Q7W8G1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W8G1" FT /protein_id="CAE37473.1" FT /translation="MKRTALIAGPYGIVGNALVQHLARDAAWDVVTISRRQEATLPGVR FT HIAADLLDAAQAEAALAAFPGITHVFYCAYAPRPTLGEEAAPNLAMLANLVSAVDRHAR FT GLARVVLVHGTKWYGNHLGPFRTPAREDDARHCPPNFYYDQQDWIAARQRESGRWSWTA FT FRPHGIFGYALGSPMNHLMALSLYASVMKAAATPLKFPGTPAAFAALNQCTDARLLARA FT MAWSVDVAACENEAFNFHNGEPERWANLWPAVAEAFGMQAGGVQQIRLAAMMPANEAAW FT QAICQRQGLRHFPLEAYVNWSFADWVYSNGFDQVCSLYKLRRAGWTEILLFDDMLKSML FT SDLRQRKLLPA" FT CDS 233504..234295 FT /transl_table=11 FT /locus_tag="BPP2174" FT /product="GntR-family transcriptional regulator" FT /note="ortholog of Bordetella pertussis (BX470248) BP0888" FT /db_xref="GOA:Q7W8G0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8G0" FT /protein_id="CAE37474.1" FT /translation="MAQMKDNNVSNRATLVLYENRFIPLYRMIKEELIRFVQKKGIKSG FT MALPGDNELASQFGVSVGTVRRAIAELVSERIVIRQQGRGTFLAPYDTSRMLNSFWHIE FT RRDGVVDVPLVSTHGFSQASATEEVAQKLALQPGDPVFVIKNSMTMQGTPVLLDTIYVP FT VRTFEGLTREKLSARDATIYDFYREQYGINIVKTIDRVSATVADKDTAKRLGCKLGAPM FT LRILRVAYSFGDTPIEYRCSLLDSENHEYVDVTGGDTSRYG" FT misc_feature 233588..233767 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family, score 2.6e-15" FT CDS 234328..235698 FT /transl_table=11 FT /gene="accC" FT /gene_synonym="fabG" FT /locus_tag="BPP2175" FT /product="biotin carboxylase" FT /EC_number="6.3.4.14" FT /note="ortholog of Bordetella pertussis (BX470248) BP0889" FT /db_xref="GOA:Q7W8F9" FT /db_xref="HSSP:1BNC" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/TrEMBL:Q7W8F9" FT /protein_id="CAE37475.1" FT /translation="MRLKKVLIANRGEIALRIVRACREMDIRTVQVYSSADEDSLPVRL FT ADEAVPIGGPEPSASYLNIAALIAAAREHGCDAIHPGYGFLSENEDFAQACIDAGIVFI FT GPDPGAIRMMGDKAQARKIAKEAGVPIVPGAPEPVSDVEEAIKVAREVGYPLLVKAAAG FT GDGRGMRVIQGEAQLREGLERASMEAKSAFGDGSVYIERYISPVRHVEIQVFGDGEDVI FT HLGERECSIQRRHQKLLEESPSPVLSEETRQRMGEAACALARAVKYRGAGTLEFVMDGK FT SGEFFFIEMNTRIQVEHPVTEAVTGVDLVRLQLAVAAGGRLGLRQQDIVMKGHAIECRI FT NAEDPQKAFMPSPGTVNDIRLPSGPGVRMDSHVYRGYKLPPYYDSLLGKLIVWDESREK FT AIARMLRALGELEIVGVKTTKEFHERLMRDEDFIAANVSTQFVKEKLYADHPMRHLL" FT misc_feature 234331..234669 FT /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthase FT L chain, N-terminal domain, score 3.5e-42" FT misc_feature 234673..235317 FT /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase FT L chain, ATP binding domain, score 8e-95" FT misc_feature 235186..235209 FT /note="PS00867 Carbamoyl-phosphate synthase subdomain FT signature 2." FT misc_feature 235336..235656 FT /note="HMMPfam hit to PF02785, Biotin carboxylase FT C-terminal domain, score 2.9e-57" FT CDS 235714..237249 FT /transl_table=11 FT /locus_tag="BPP2176" FT /product="putative acyl-CoA carboxylase" FT /note="ortholog of Bordetella pertussis (BX470248) BP0890" FT /db_xref="GOA:Q7W8F8" FT /db_xref="InterPro:IPR011762" FT /db_xref="UniProtKB/TrEMBL:Q7W8F8" FT /protein_id="CAE37476.1" FT /translation="MSHEELLVDYAARKDHALGMGGPAKLEKRRAEGVLNARERLELLL FT DPGTFEESGLFAVSHRKEVAERTPADGKIAGYGKVQARKVAVVANDFTVMGASSSVVNG FT KKIRHMREVATKNGLPLIFLGESTGARMPDRMGAEGRAILGQDPYEYRRLRETPWVSAL FT LGPCYGSSTWYACLSDFVVMRRGATMAVASGRVTSKAIRQEIDSEELGGWRMHTQSTGL FT VDALAETDEEALEIVKKWLAYFPSNQNEPPPRQAVTPESVPDTGAILQHVPTDSNKVYD FT VRKAIDCIVDRDSVMELKARFGRSICTMVARLDGHPVGILASNPMFKGGAIDVDACNKA FT ISFLVLCDSFNIPLVFLVDQPGFLIGIEGERRAAPGRIMNWMNAISLVTVPKISVIMRK FT SYGQAYLNMGGGRNSDEVLAWPSADLGFMAPGVGANVLFGVNEQDDPERYRELVAQLSK FT DTSAWGLAALYETHAVIDPRETRAHLIRLLDIHRGAQGRRIGQHLLSNWPTTY" FT misc_feature 235753..237210 FT /note="HMMPfam hit to PF01039, Carboxyl transferase domain, FT score 8.9e-80" FT CDS 237295..237516 FT /transl_table=11 FT /locus_tag="BPP2177" FT /product="Putative biotinylated protein" FT /note="Similar to Bacillus subtilis YngXX SWALL:Q9R9I3 FT (EMBL:AF184956) (73 aa) fasta scores: E(): 2.2e-08, 48.52% FT id in 68 aa, and to Mycobacterium tuberculosis biotinylated FT protein TB7.3 Rv3221c or MT3317 or MTCY07D11.05 FT SWALL:BTB7_MYCTU (SWALL:O05845) (70 aa) fasta scores: E(): FT 2.1e-06, 45.58% id in 68 aa, and to Streptococcus mutans FT biotin carboxyl carrier protein SWALL:BCCP_STRMU FT (SWALL:P29337) (130 aa) fasta scores: E(): 0.00013, 42.62% FT id in 61 aa" FT /db_xref="HSSP:1DCZ" FT /db_xref="InterPro:IPR000089" FT /db_xref="UniProtKB/TrEMBL:Q7W8F7" FT /protein_id="CAE37477.1" FT /translation="MANVEVISEVSGSVWKVLVAAGDTVAEDQEIAILESMKMEIPVLA FT PCGGTIGDLRMEVGAPVGEGDVIAVISE" FT misc_feature 237304..237507 FT /note="HMMPfam hit to PF00364, Biotin-requiring enzyme, FT score 2.1e-14" FT CDS 237513..238238 FT /transl_table=11 FT /locus_tag="BPP2178" FT /product="Putative acetyl-CoA synthetase" FT /note="Similar to Pyrococcus furiosus DSM 3638 acetyl-CoA FT synthetase PF1787 SWALL:AAL81911 (EMBL:AE010276) (232 aa) FT fasta scores: E(): 2.8e-30, 44.73% id in 228 aa, and to FT Thermoplasma volcanium succinyl CoA synthetase alpha FT subunit TV1257 or TVG1294312 SWALL:Q979A5 (EMBL:AP000995) FT (693 aa) fasta scores: E(): 2e-26, 38.07% id in 239 aa" FT /db_xref="UniProtKB/TrEMBL:Q7W8F6" FT /protein_id="CAE37478.1" FT /translation="MSPAPMDQRELSSILRQALEAGRGALDEPTGKRILAGHGIAVPKS FT VVLPADASFAQVEGQLAQPYVLKLVSPDVIHKTEMGGVRLNLASPAALRQAADEMRQRV FT EQAGARVEGWLVEEMAEPGVEVLVGGLRDPEFGPMVMIGLGGIFVEIFKDVAFRICPVT FT REDALDMIGELRSSPLLAGARGKQAVSIDALVETILRVGGEGGVLLAGQPEVAELDINP FT LIVSPRGAVAVDARFILTQ" FT CDS join(238246..238980,238984..239742) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2179" FT /product="Conserved hypothetical protein (pseudogene)" FT /note="Similar to Pyrococcus furiosus DSM 3638 hypothetical FT 47.9 kDa protein PF1085 SWALL:AAL81209 (EMBL:AE010219) (442 FT aa) fasta scores: E(): 2.1e-40, 36.31% id in 380 aa, and to FT Archaeoglobus fulgidus hypothetical protein AF1211 FT SWALL:O29057 (EMBL:AE001020) (685 aa) fasta scores: E(): FT 7.1e-40, 32.65% id in 490 aa" FT /db_xref="PSEUDO:CAE37479.1" FT misc_feature 238273..238593 FT /note="HMMPfam hit to PF02629, CoA binding domain, score FT 3.1e-07" FT CDS 239781..240788 FT /transl_table=11 FT /locus_tag="BPP2180" FT /product="Putative solute-binding protein" FT /note="Similar to Bacillus halodurans C4-dicarboxylate FT transport system BH0701 SWALL:Q9KEZ8 (EMBL:AP001509) (341 FT aa) fasta scores: E(): 8e-24, 31.78% id in 302 aa, and to FT Rhodobacter capsulatus C4-dicarboxylate-binding periplasmic FT protein precursor DctP SWALL:DCTP_RHOCA (SWALL:P37735) (333 FT aa) fasta scores: E(): 1.9e-22, 32.24% id in 307 aa" FT /db_xref="GOA:Q7W8F5" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q7W8F5" FT /protein_id="CAE37480.1" FT /translation="MKLKMLAAACAAAAVSLLTPASAVHAQGKPAKVLKLAHGATENQA FT VGMAFLKFAELVKEKSGGTLAIETHLAGSLYNERTSIEAVLNGAVDLGGGSNANWGAFT FT RTLIFMDLPYVFKDEAAFEKAMAGQVGEEIRQRFERDGFKLLMLLNNGGFRHVVNTKKQ FT LKVPGDLAGLKIRTTASPVEIAMFKNWGAIPTSVDWAEVYNALSSGVVDGEFVMPTWLA FT TAKHYEVLKYATANDAVIGVQTLVMRKDRFAKLPAESQKAILEASREAEAYGNRIDHDM FT AAKALAYAESQGVKVYHPSAEEMTQWRTTGQQIWKQFEGQLDKTLFQQVLDAQK" FT misc_feature 239781..239858 FT /note="Signal peptide predicted for BPP2180 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.991 between residues 26 and 27" FT misc_feature 239886..240746 FT /note="HMMPfam hit to PF03480, Bacterial extracellular FT solute-binding protein, family 7, score 4.8e-75" FT CDS 240891..241448 FT /transl_table=11 FT /locus_tag="BPP2181" FT /product="Putative membrane protein" FT /note="Similar to Salmonella typhimurium putative FT C4-dicarboxylate transport system STM4053 SWALL:Q8ZKR9 FT (EMBL:AE008889) (171 aa) fasta scores: E(): 2.5e-08, 25.18% FT id in 135 aa, and to Rhizobium meliloti putative FT C4-dicarboxylate small membrane transport protein DctQ or FT RB0928 or SMB21352 SWALL:Q92V06 (EMBL:AL603645) (165 aa) FT fasta scores: E(): 2.2e-07, 28.36% id in 141 aa" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q7W8F4" FT /protein_id="CAE37481.1" FT /translation="MAELSERREYQTMNRKQGAAALTTRVLVGFPRMVLAGLLALLIIF FT LVMSVISRYFMQLGTPWSDEFARILFAWIVMVGFAVAVQQRANVAVDILVEQAGPRMKR FT ALYILQDALILVFSVVFTYAAYQTVQFASIQTLPGLGITIGWLYSSCVAAGVLMVVYAT FT LMLIQTLRGQRQPPHYEAGGDL" FT misc_feature join(240990..241058,241086..241139,241203..241271, FT 241314..241382) FT /note="4 probable transmembrane helices predicted for FT BPP2181 by TMHMM2.0 at aa 34-56, 66-83, 105-127 and FT 142-164" FT CDS 241466..242752 FT /transl_table=11 FT /locus_tag="BPP2182" FT /product="Putative membrane protein" FT /note="Similar to Caulobacter crescentus DedA family FT protein CC1448 SWALL:Q9A8A6 (EMBL:AE005819) (426 aa) fasta FT scores: E(): 3.9e-49, 38.31% id in 428 aa, and to FT Pseudomonas aeruginosa probable C4-dicarboxylate FT transporter PA5169 SWALL:Q9HU16 (EMBL:AE004929) (427 aa) FT fasta scores: E(): 5.3e-47, 34.5% id in 426 aa" FT /db_xref="GOA:Q7W8F3" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q7W8F3" FT /protein_id="CAE37482.1" FT /translation="MTIAILSFSFVLLVLVGMPISFAMGISSLLAMLYQSDLPINLLVH FT RTVMGIDSFVLLAIPLFIFAGSIMEQGGISERLVRFAYTLLGRFRGGLPMVVVGSTMLQ FT SGISGSTVADVSAMSAMTLKPLENEGYPRPYSLSVIGASCAFSILIPPCILMVVVAAVA FT NTSVVAVFAAGVVPAVVIGLMFFAFIHIQARLQNMPRGEAYSFVAILKGLKDALFALGV FT PILIFGGIRMGVATVTEMAAFAVVYSLLVGGLVYRRLSWRGIYQALVDTCVATGVICLL FT MGFAMIFGYLLATEGVPGAVAQWIRDNHISPWGVMLITALIFVFIGAVLEGAPAVLIFV FT PILLPVVRELGIDVVHWLTVVVLASGIGLFVPPTGLAVLVACSVGRVSMQAIIRPLIPF FT LLLLLAGLAVIMAFPVISIGLPRAMGIPW" FT misc_feature 241466..241534 FT /note="Signal peptide predicted for BPP2182 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.999) with cleavage site FT probability 0.503 between residues 23 and 24" FT misc_feature join(241478..241546,241589..241657,241718..241786, FT 241880..241948,241967..242035,242078..242146, FT 242165..242233,242276..242344,242402..242506, FT 242549..242617,242651..242719) FT /note="11 probable transmembrane helices predicted for FT BPP2182 by TMHMM2.0 at aa 5-27, 42-64, 85-107, 139-161, FT 168-190, 205-227, 234-256, 271-293, 313-347, 362-384 and FT 396-418" FT CDS 242765..244003 FT /transl_table=11 FT /locus_tag="BPP2183" FT /product="Putative membrane protein" FT /note="Similar to Rhizobium meliloti putative transporter FT protein RB0262 or SMB20272 SWALL:Q92WR7 (EMBL:AL603642) FT (402 aa) fasta scores: E(): 7.5e-21, 27.52% id in 396 aa, FT and to Pseudomonas aeruginosa hypothetical protein PA2091 FT SWALL:Q9I224 (EMBL:AE004636) (427 aa) fasta scores: E(): FT 1.1e-16, 29.95% id in 424 aa" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q7W8F2" FT /protein_id="CAE37483.1" FT /translation="MRAADPDSPYSWAVAAATLVLASLSFGAANSLPMLFPELSAEFGW FT DGSSVASLYGATMAGAAVSSLLMGRLLDRIGFFPIGVVATLAMCGGMALASVATARWQF FT YLIYAVLIGGLGQGAFLSTVAAAVSQWFLRSRSLAVAIALCGQGVGGLLVPPLLRAVSG FT GHGWRDALLAYAAVAVVAMLAAMALYMPRPPVGLGRPRSLAGPPAGAAAPDGGRLIVWL FT ALALLLANSAAAGVASHLVSYGAQAGLSPVRAGALMSAHYGLVLVARLAIGYSLDRLDK FT YAVLLATTAIQIVGALLLQFTDSIAMVVAGAAAIGIGFGGYYPAYGALMQGHYPKEQVG FT RRLTELYLASFIAAGFGTWLVGTLFDLRGGRFDLAFFAALLLSMLALGIVLACKSRIAG FT HGGAKRLALPAQR" FT misc_feature 242765..242848 FT /note="Signal peptide predicted for BPP2183 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.927) with cleavage site FT probability 0.320 between residues 28 and 29" FT misc_feature join(242801..242869,242912..242980,242993..243061, FT 243074..243142,243176..243244,243272..243331, FT 243419..243487,243515..243583,243608..243661, FT 243674..243742,243800..243859,243887..243940) FT /note="12 probable transmembrane helices predicted for FT BPP2183 by TMHMM2.0 at aa 13-35, 50-72, 77-99, 104-126, FT 138-160, 170-189, 219-241, 251-273, 282-299, 304-326, FT 346-365 and 375-392" FT CDS 244104..245336 FT /transl_table=11 FT /locus_tag="BPP2184" FT /product="Putative reductase" FT /note="Similar to Burkholderia cepacia MopA SWALL:Q45081 FT (EMBL:U29532) (431 aa) fasta scores: E(): 5.5e-50, 42.53% FT id in 395 aa, and to Rhodococcus erythropolis rhodocoxin FT reductase ThcD SWALL:THCD_RHOER (SWALL:P43494) (426 aa) FT fasta scores: E(): 1.1e-42, 41.33% id in 404 aa" FT /db_xref="GOA:Q7W8F1" FT /db_xref="HSSP:1D7Y" FT /db_xref="InterPro:IPR013027" FT /db_xref="UniProtKB/TrEMBL:Q7W8F1" FT /protein_id="CAE37484.1" FT /translation="MEQQHTIVIIGAGQAGGWAARTLRAEGYAGRVLLCGDETAPPYER FT PPLSKEQLAAQAPALPSLMDAAQLAELHIDWLGGAAATRIDRAGRRVLLGDGQALRYDA FT LILCTGGRPRLPPLPGADLPCVHTLRTIDDAARLRAAFDGTPRVAVLGGGWIGLEVAAA FT ARQRGGAVVLLEAADRLCARSGPGLLSETLARLHAGQGVDLRLNARVQRIDAHGRGCRL FT ALADGQGIEADIVVAGVGLVRNDELARQAGLACDHGVIVDGACRTSDPDIYAAGDVAVM FT ARPDGKLAGLESWQNAQDQGIAAARAALGQAVRYAPLPFFWSQQYDTLVQMAGASEPGA FT ALVLRQGGPAQLLCVEMRADGRAAAVLGVNAAREFRQLRKYIAEGARLDARRLADPRSP FT LAGAVLGEAAA" FT misc_feature 244119..244976 FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreductase, score 1.1e-68" FT misc_feature 244344..244394 FT /note="PS00216 Sugar transport proteins signature 1." FT CDS 245435..245845 FT /transl_table=11 FT /locus_tag="BPP2185" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR002345" FT /db_xref="UniProtKB/TrEMBL:Q7W8F0" FT /protein_id="CAE37485.1" FT /translation="MNMDETQALVAVVYRFFSGLDRRDNEAVAGLMADDGVWNRQGTEL FT VGPDAVRAALAQRDPRRQTAHIVSNLWIEQATPDSARVRFYMTAYETLTSPDGVVGEPR FT MLGVRDCVDELARVGGAWRIARKQSRRLLPAE" FT misc_feature 245774..245809 FT /note="PS00213 Lipocalin signature." FT CDS 245872..246681 FT /transl_table=11 FT /locus_tag="BPP2186" FT /product="Putative decarboxylase" FT /note="Similar to Pseudomonas aeruginosa FT 2-oxo-hept-3-ene-1,7-dioate hydratase HpcG or PA4127 FT SWALL:Q9HWQ4 (EMBL:AE004829) (267 aa) fasta scores: E(): FT 2.4e-64, 65.78% id in 266 aa, and to Escherichia coli FT 2-oxo-hepta-3-ene-1,7-dioic acid hydratase HpcG FT SWALL:HPCG_ECOLI (SWALL:P42270) (264 aa) fasta scores: E(): FT 2e-57, 58.27% id in 266 aa" FT /db_xref="GOA:Q7W8E9" FT /db_xref="InterPro:IPR012690" FT /db_xref="UniProtKB/TrEMBL:Q7W8E9" FT /protein_id="CAE37486.1" FT /translation="MAVLDDALLDTLARELYEAEQTRTPIRQLSLRHPALTIEDAYAIQ FT RKWVALKIAAGNPLKGHKIGLTSRAMQAAIGIDEPDYGALLDDMFFADGATIPAGRFIA FT PRVEVELAFIMGRRLEGPDVTLFDVLEAARYVTPALEILDARVQMVDPQTRATRKVTDT FT ISDNAANAGVVLGGRPVRVDEVDLRRVGAILMRNAVVEETGLAAGVLNHPANGVAWLAR FT KLSAHGIALEKDQVIMTGSFTRPVHAASGDTLSADYGPLGTVSCHFA" FT misc_feature 245887..246561 FT /note="HMMPfam hit to PF01689, Hydratase/decarboxylase, FT score 1.2e-112" FT CDS 246864..247808 FT /transl_table=11 FT /locus_tag="BPP2187" FT /product="Putative LysR-family transcriptional regulator" FT /note="Similar to Ralstonia solanacearum probable FT transcription regulator protein RSP0910 or RS01682 FT SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): FT 1.5e-38, 40.67% id in 295 aa, and to Brucella melitensis FT transcriptional regulatory protein, LysR family BMEII1065 FT SWALL:Q8YB36 (EMBL:AE009739) (325 aa) fasta scores: E(): FT 3.5e-33, 36.36% id in 297 aa" FT /db_xref="GOA:Q7W8E8" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q7W8E8" FT /protein_id="CAE37487.1" FT /translation="MGGASTEFIGLRQPSALAFEDLTTLRIFVRTVEIGNFSEVARRIG FT ANPAMVSKRIANLEHKIGQRLLNRNTRRLMVTEAGQRLYDHCMRALIELDQAAEEMSNM FT QDKASGLLRMTAPAMLGEAVIAPQLPQFLQQNPLLSLDINFSLEKVDLFKARIDVAVRI FT ADSVDPGLVAIKLAPYRRVFCVAPQYIEAKGTPELPADLMDHNCLITRGSVLNTRWPVR FT LDGEIGNVPVKGNLVTDNGHAARLACLAGLGVMMAPRWLLDEDIRAGRLVEVLADYVPD FT NRSVYALLLQRTGFSAKLQIAIDFLKRCFASMN" FT misc_feature 246927..247106 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family, score 4.7e-16" FT misc_feature 247176..247796 FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.1e-38" FT CDS complement(247805..248704) FT /transl_table=11 FT /locus_tag="BPP2188" FT /product="putative membrane protein" FT /note="Similar to Rhizobium loti hypothetical protein FT MLR0868 SWALL:Q98LU9 (EMBL:AP002995) (293 aa) fasta scores: FT E(): 1.5e-46, 45.1% id in 286 aa, and to Xylella fastidiosa FT hypothetical protein XF2573 SWALL:Q9PAE5 (EMBL:AE004064) FT (311 aa) fasta scores: E(): 8.1e-23, 28.47% id in 288 aa" FT /db_xref="GOA:Q7W8E7" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q7W8E7" FT /protein_id="CAE37488.1" FT /translation="MGISNWQPTMRAACWMSGALVSLLAMAVATRELSAHVSVFQILFF FT RSACGLLIIVPLVWRAGWRKVATARPGLHVLRNATHFLAQYGWVYGIAFIPMAEVFAIE FT FTVPVWTALLAAVLLGERLTAARLLAVALGLAGVFVIVRPGSGMIHPAALAVLLGAVAF FT ALAYIMTKMLARTETPLCILFYMTLVQLPLGLAPALANWSSPPPHVWPWILVVGTMGLA FT THYCLARAMALADATVVVPLDFLRLPLIAVVGAVFYGEAIEPLLFLGAGMILAGNLYSI FT LAERRRPAMPRAARDGSH" FT misc_feature complement(join(247856..247921,247934..247999, FT 248021..248077,248108..248164,248201..248266, FT 248279..248335,248375..248440,248528..248593)) FT /note="8 probable transmembrane helices predicted for FT BPP2188 by TMHMM2.0 at aa 28-50, 79-101, 114-133, 137-159, FT 171-190, 200-219, 226-248 and 252-274" FT misc_feature complement(247859..248224) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 6.9e-08" FT misc_feature complement(248276..248644) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 8e-15" FT misc_feature complement(248624..248677) FT /note="Signal peptide predicted for BPP2188 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.996) with cleavage site FT probability 0.879 between residues 18 and 19" FT CDS 248889..249212 FT /transl_table=11 FT /gene="ndoA" FT /gene_synonym="pahA2" FT /locus_tag="BPP2189" FT /product="Putative ferredoxin" FT /note="Similar to Pseudomonas aeruginosa naphthalene FT 1,2-dioxygenase system ferredoxin component NdoA or PahA2 FT SWALL:NDOA_PSEAE (SWALL:Q51493) (103 aa) fasta scores: E(): FT 1.9e-22, 57% id in 100 aa, and to Escherichia coli, and FT Escherichia coli O157:H7 3-phenylpropionate dioxygenase FT ferredoxin subunit HcaC or PhdB or HcaA3 or B2540 or Z3811 FT or ECS3406 SWALL:HCAC_ECOLI (SWALL:P77266) (106 aa) fasta FT scores: E(): 4.6e-10, 41.86% id in 86 aa" FT /db_xref="GOA:Q7W8E6" FT /db_xref="HSSP:1FQT" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/TrEMBL:Q7W8E6" FT /protein_id="CAE37489.1" FT /translation="MSEQWTDVGGEDMLTEEEPVAVRVADREIALYLAHGEVYATDNLC FT THGNARLCDGFQEGHEIECPLHQGRFDIRDGRALCAPLTRDIRTYPSRVEGGRVLVRVA FT GAD" FT misc_feature 248898..249179 FT /note="HMMPfam hit to PF00355, Rieske [2Fe-2S] domain, FT score 4.1e-24" FT CDS 249334..250197 FT /transl_table=11 FT /locus_tag="BPP2190" FT /product="Putative oxygenase" FT /note="Similar to Salmonella typhimurium putative FT fumarylacetoacetate STM0331 SWALL:Q8ZRI8 (EMBL:AE008710) FT (292 aa) fasta scores: E(): 2.5e-37, 43.55% id in 287 aa, FT and to Burkholderia cepacia trihydroxytoluene oxygenase FT DntG SWALL:Q8VUC7 (EMBL:AF169302) (281 aa) fasta scores: FT E(): 2.8e-34, 40% id in 285 aa" FT /db_xref="GOA:Q7W8E5" FT /db_xref="HSSP:1GTT" FT /db_xref="InterPro:IPR011234" FT /db_xref="UniProtKB/TrEMBL:Q7W8E5" FT /protein_id="CAE37490.1" FT /translation="MKLVSYLDRTQRDPQPSYGAVVGERIIDLATPQAPTLRAALARDG FT VDGLAARLRQADGAAGLALADATLLAPITDPDKILCIGLNYRLHAEEAGMAIPARPSTF FT VRFVGSLAAQGQPVLRPAESDQFDYEAELAVIIGKPARRVSQARAMEHVAGYACLAENS FT VRDWQRHSTQATPGKNFVRSGAFGPWLVTADEAGAPEAMTVIGRLNGETVQHDSVANMI FT FTVAQLVSYLSTFAELLPGDVIATGTPAGVGMSRKPPRYLRPGDVFEVDISGVGVLRNP FT VDDDSR" FT misc_feature 249610..250104 FT /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA) FT hydrolase family, score 2.3e-48" FT CDS 250209..251207 FT /transl_table=11 FT /locus_tag="BPP2191" FT /product="Putative cyclodeaminase" FT /note="Similar to Halobacterium sp. ornithine FT cyclodeaminase Ocd2 or VNG1364G SWALL:Q9HQ24 FT (EMBL:AE005056) (328 aa) fasta scores: E(): 2.3e-20, 30.3% FT id in 330 aa, and to Rhizobium meliloti ornithine FT cyclodeaminase 2 Ocd2 or RA1029 or SMA1871 SWALL:OCD2_RHIME FT (SWALL:P58339) (342 aa) fasta scores: E(): 1.9e-13, 26.76% FT id in 325 aa" FT /db_xref="GOA:Q7W8E4" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q7W8E4" FT /protein_id="CAE37491.1" FT /translation="MLSSAIWLSEENITALVSLKEAIGVLETGVRALGTGEGFNIPKAL FT GAYGDASSMHSLGSALPEAGFCGYKNWINTPRGAKAVYVLFDAHEGRLLAIMEANALGQ FT MRTSAMTGLGTKWVARPGADDMAIIGTGRQALAQVAAVHAVWPLARIRVWSPTAENRQA FT FFETLRAQFDTEVVVADSLAQACDGATIVTTVTRAREPFLDAGVLGRGVHLNAVGAILP FT HSAEFSQDVFARVGFIAVDDVAGAQKASREFIDYFEKGPGKGDWSRVRPLGEVIAGGET FT PAPDCDISLFKAMGMGISDLSVAVLAYQRAKDAQIGQSISLMANAPIRLPV" FT misc_feature 250215..251153 FT /note="HMMPfam hit to PF02423, Ornithine FT cyclodeaminase/mu-crystallin family, score 5.8e-43" FT CDS 251235..252353 FT /transl_table=11 FT /locus_tag="BPP2192" FT /product="Putative dioxygenase" FT /note="Low similarity to Bacillus halodurans gentisate FT 1,2-dioxygenase BH2004 SWALL:Q9KBC4 (EMBL:AP001514) (365 FT aa) fasta scores: E(): 7.4e-06, 25.32% id in 304 aa" FT /db_xref="GOA:Q7W8E3" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q7W8E3" FT /protein_id="CAE37492.1" FT /translation="MEHKETTLDNKIKLVDVSGRPAREQTFWPTVVLPRAAIESEIERL FT ASIPAPADGLRAASVDHPSNTGPIPAYAPGIDVQIVVLKPGEQTEPMLRNSSCVDMCIR FT GKGQVTTGAKTFQAERFDVWNTPSMMPVVYRNDGSDLFVRLCYSNAPLLERLDVHYVGQ FT VANATRPGSQDAALAASQRRARDAATPIPIGEDGAQMLGYEWLVDIDTVDSRMLHWPWK FT DVSPHLETVYGMDLAYTGRHLYVLYNPATERRIGTSHSFFATIAKLTPGKVDQPHRHTS FT AAINYIMWGNGKSVVNGEKIQWQEGDLHFSAPGWSVHNHASRDQGFVALTIQDHPLHIA FT MESLLWQETLKSPILKLGSEQGIQTNLSRVAA" FT CDS 252361..252879 FT /transl_table=11 FT /locus_tag="BPP2193" FT /product="Putative dioxygenase (small subunit)" FT /note="Similar to Sphingomonas aromaticivorans small FT subunit aromatic oxygenase BphA2D SWALL:O85985 FT (EMBL:AF079317) (162 aa) fasta scores: E(): 3e-16, 35.76% FT id in 137 aa, and to Escherichia coli 3-phenylpropionate FT dioxygenase beta subunit HcaF or PhdC2 or HcaB or HcaA2 or FT DigB or B2539 SWALL:HCAF_ECOLI (SWALL:Q47140) (172 aa) FT fasta scores: E(): 2.5, 27.27% id in 99 aa" FT /db_xref="GOA:Q7W8E2" FT /db_xref="InterPro:IPR000391" FT /db_xref="UniProtKB/TrEMBL:Q7W8E2" FT /protein_id="CAE37493.1" FT /translation="MRDRIVPMVAPVPRDPALFALEASVRRLYDEIADMLDQDLVERFP FT DYFVEDCLYQVVSRENYAEGLPQANIYCDGLGMVRDRVTALRETQVYVPRIWRHFISGV FT RITAIDGEDIHARANFLITEAMSDADPTIFLVGQYLDVLVRDGDELKFWQHLAVFDNHH FT VRRSLIVPV" FT CDS join(252895..253362,253358..253963,253959..254180) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2194" FT /product="Putative oxygenase (large subunit) (pseudogene)" FT /note="Similar to Ralstonia sp. U2 salicylate-5-hydroxylase FT large oxygenase component NagG SWALL:O52379 (EMBL:AF036940) FT (423 aa) fasta scores: E(): 3.3e-67, 44.65% id in 421 aa, FT and to Escherichia coli, and Escherichia coli O157:H7 FT 3-phenylpropionate dioxygenase alpha subunit HcaE or PhdC1 FT or HcaA or HcaA1 or DigA or B2538 or Z3809 or ECS3404 FT SWALL:HCAE_ECOLI (SWALL:Q47139) (453 aa) fasta scores: E(): FT 1.1e-17, 27.37% id in 431 aa" FT /db_xref="PSEUDO:CAE37494.1" FT misc_feature join(253030..253362,253358..253363) FT /note="HMMPfam hit to PF00355, Rieske [2Fe-2S] domain, FT score 8.5e-30" FT misc_feature join(253406..253963,253959..254108) FT /note="HMMPfam hit to PF00848, Ring hydroxylating alpha FT subunit (catalytic domain), score 0.00033" FT CDS join(254177..255382,255384..255392) FT /pseudo FT /transl_table=11 FT /locus_tag="BPP2195" FT /product="Putative ABC transport system, substrate-binding FT protein (Pseudogene)" FT /note="Similar to Azoarcus evansii putative ABC transporter FT subunit BzdB' SWALL:Q8VUF0 (EMBL:AJ428529) (496 aa) fasta FT scores: E(): 2.3e-42, 34.18% id in 430 aa, and to FT Rhodopseudomonas palustris putative ABC transporter FT substrate binding protein HbaE SWALL:O07470 (EMBL:U75364) FT (392 aa) fasta scores: E(): 6.1e-31, 31.08% id in 370 aa" FT /db_xref="PSEUDO:CAE37495.1" FT misc_feature 254177..254290 FT /note="Signal peptide predicted for BPP2195 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.900 between residues 38 and 39" FT misc_feature 254222..254290 FT /note="1 probable transmembrane helix predicted for BPP2195 FT by TMHMM2.0 at aa 16-38" FT CDS 255460..256323 FT /transl_table=11 FT /locus_tag="BPP2196" FT /product="Putative ABC transport system, membrane protein" FT /note="Similar to Rhodopseudomonas palustris putative ABC FT transporter subunit HbaF SWALL:O07469 (EMBL:U75364) (286 FT aa) fasta scores: E(): 4.1e-38, 39.37% id in 287 aa, and to FT Brucella melitensis high-affinity branched-chain amino acid FT transport system permease protein Livh BMEII0632 FT SWALL:Q8YCA0 (EMBL:AE009699) (289 aa) fasta scores: E(): FT 1.2e-33, 38.88% id in 288 aa. Note: This CDS has 19 FT residues overlap in its N-terminal region with the CDS FT upstream of it; possible alternative start codon at residue FT 20" FT /db_xref="GOA:Q7W8E1" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8E1" FT /protein_id="CAE37496.1" FT /translation="MDFVITQLLNSLVLGVLLFMMSAGLSLIFGLMNVVNIAHGSFFMI FT GAFTAYTLAQFSGNFWFALGVGWIPAVAAAVLMERVFIRPLYKRGHLDQVLLTFGFIFV FT FGDICKYLWGADIRNVAPPEMLEGSLELAGAIVPKYRLFLVCFGGVVAVALWWFLERSR FT IGAMVRAGVDDAATAAGIGINVPLLFGCIFALGAALAAIGGIVASPILGVYLGMDVEIL FT IPAFIVTVVGGMGSLRGALVAAMLVGAIDTFGKAYFPDYALFLVYLLMVVVLLTRPQGL FT FGIARA" FT misc_feature 255517..255621 FT /note="Signal peptide predicted for BPP2196 by SignalP 2.0 FT HMM (Signal peptide probabilty 0.965) with cleavage site FT probability 0.261 between residues 35 and 36" FT misc_feature 255517..256317 FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport system / permease component, score 3.5e-14" FT misc_feature join(255529..255597,255640..255708,255742..255810, FT 255868..255936,256012..256080,256123..256191, FT 256228..256287) FT /note="7 probable transmembrane helices predicted for FT BPP2196 by TMHMM2.0 at aa 5-27, 42-64, 76-98, 118-140, FT 166-188, 203-225 and 238-257" FT CDS 256326..257327 FT /transl_table=11 FT /locus_tag="BPP2197" FT /product="Putative ABC transport system, membrane protein" FT /note="Similar to Agrobacterium tumefaciens ABC FT transporter, membrane spanning protein ATU4127 or FT AGR_L_1453 SWALL:AAL44927 (EMBL:AE009343) (335 aa) fasta FT scores: E(): 8.6e-34, 41.11% id in 287 aa, and to Ralstonia FT solanacearum probable transmembrane ABC transporter protein FT RSC3340 or RS02575 SWALL:Q8XU53 (EMBL:AL646074) (328 aa) FT fasta scores: E(): 6.1e-31, 38.62% id in 321 aa" FT /db_xref="GOA:Q7W8E0" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q7W8E0" FT /protein_id="CAE37497.1" FT /translation="MKTASRPMLFALLCAALAAAPLASDYTLGLISEILIFAIFAMSLN FT LLVGYTGLMSLGHAAFFGMSTYTVIALGVHLGISGWWGILAGVAMATALAAVIGVFCIR FT VSGIPFLMLTMAFSQLLYAASLKWRSLSGGSDGLVGFVRPALFGVSLSESAVARYAVVA FT VGFALVLVFLWCLVRSPLGSIFIGIRDNEQRMRAIGYPVQRFKLLSFIIAGFLAGVAGA FT LYALFNAYVSTDILHWHLSGDVMIMMILGGSGTVLGPAIGAALFLLLKNFIGSYNDYWS FT FWVGAVFIFCVMFMREGVWGYAVARWRAAHRSAPPQAPPEPPVAKAVLREAK" FT misc_feature 256326..256394 FT /note="Signal peptide predicted for BPP2197 by SignalP 2.0 FT HMM (Signal peptide probabilty 1.000) with cleavage site FT probability 0.675 between residues 23 and 24" FT misc_feature join(256344..256397,256407..256475,256488..256556, FT 256566..256634,256638..256697,256788..256856, FT 256938..257006,257064..257132,257169..257237) FT /note="9 probable transmembrane helices predicted for FT BPP2197 by TM |