EBI Dbfetch

ID   BX640425; SV 1; linear; genomic DNA; STD; PRO; 348257 BP.
XX
AC   BX640425;
XX
DT   09-AUG-2003 (Rel. 76, Created)
DT   23-OCT-2008 (Rel. 97, Last updated, Version 6)
XX
DE   Bordetella parapertussis strain 12822, complete genome; segment 3/14
XX
KW   complete genome.
XX
OS   Bordetella parapertussis
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
XX
RN   [2]
RP   1-348257
RA   Sebaihia M.;
RT   ;
RL   Submitted (06-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL   Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute,
RL   Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail:
RL   ms5@sanger.ac.uk
XX
RN   [3]
RA   Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E.,
RA   Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L.,
RA   Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A.,
RA   Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I.,
RA   Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T.,
RA   Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S.,
RA   Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E.,
RA   Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M.,
RA   Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S.,
RA   Barrell B.G., Maskell D.J.;
RT   "Comparative analysis of the genome sequences of Bordetella pertussis,
RT   Bordetella parapertussis and Bordetella bronchiseptica";
RL   Nat. Genet. 35(1):0-0(2003).
XX
DR   EMBL-CON; BX470249.
DR   CABRI; NCIMB 9871.
DR   RFAM; RF01068; mini-ykkC.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..348257
FT                   /organism="Bordetella parapertussis"
FT                   /strain="12822"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:519"
FT   CDS             266..1240
FT                   /transl_table=11
FT                   /locus_tag="BPP0659"
FT                   /product="putative exported protein"
FT                   /note="Similar to Agrobacterium tumefaciens hypothetical
FT                   protein Atu4727 or Agr_l_312 SWALL:AAL45521 (EMBL:AE009401)
FT                   (329 aa) fasta scores: E(): 1.5e-37, 39.53% id in 301 aa,
FT                   and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9
FT                   (EMBL:AB029044) (326 aa) fasta scores: E(): 8.6e-37, 36.74%
FT                   id in 313 aa"
FT                   /db_xref="GOA:Q7W1M7"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1M7"
FT                   /protein_id="CAE40068.1"
FT                   /translation="MIRSLLVGLLLTLGPAAAQAAESPDRYPSKPITIIVPFSAGGPAD
FT                   NVTRYIANQLGKTWNQQVVVENRTGAGGMIGAEAVARAAPDGYHLVLLVTGHTIMPGMQ
FT                   ASMPYRMPQDFTGITVVNRAPKLVVVHPSVPVASFAELIEKVKQEPGKYGSYGTSGVGS
FT                   MAHLSMELVNKLAGTKFVHIPYKGGGATQADLVAGRLPIGVLDLGSVLPHVQAGSLKVL
FT                   AVTSDTRSPLFPDVPTIAEVIPNFQATEWFGLAGPKGVPPAIADKLQAAIKAALSTPEA
FT                   RTRYIEGLGWELPASTPKEMDEVLASQTVKWGALVKELGLKAQ"
FT   misc_feature    266..325
FT                   /note="Signal peptide predicted for BPP0659 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.997 between residues 20 and 21"
FT   misc_feature    404..1228
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 2.4e-80"
FT   CDS             1242..2684
FT                   /transl_table=11
FT                   /locus_tag="BPP0660"
FT                   /product="putative acetyl-CoA synthetase"
FT                   /note="Similar to Pyrococcus furiosus acetyl-CoA synthetase
FT                   AcdA SWALL:Q9Y8L1 (EMBL:AJ240061) (462 aa) fasta scores:
FT                   E(): 4.6e-41, 33.26% id in 457 aa, and to Pyrococcus abyssi
FT                   succinyl-CoA synthetase alpha chain related protein pab2112
FT                   SWALL:Q9V1S3 (EMBL:AJ248284) (472 aa) fasta scores: E():
FT                   2.2e-40, 31.71% id in 473 aa"
FT                   /db_xref="GOA:Q7W1M6"
FT                   /db_xref="InterPro:IPR003781"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1M6"
FT                   /protein_id="CAE40069.1"
FT                   /translation="MDAVAMKSVTQLTVNADHLQGAIGALFKARTVAVVGISADHAKLG
FT                   NVILRNVVKNGFAGNIYGVCRAPVEPGVFEAGYERVRFVQAFSEIEEPVDVALFAVPAD
FT                   MVVTALASVPLGRLRLAVILASGFTETGERGALLETALRQYCLETQLPVVGPNCQGVVV
FT                   PGVKLQMTFSPMYNRMLEGKVAIVSQSGAMAGYMANNLMRRGVGLCCVVSSGNEAVLTA
FT                   ADYIHALADKPECRVVLCYIEQIKNGRHFARSVQRLGPQQRIVVVKSGRSTAGVAAASS
FT                   HTGAMASDDRVIDGVFRQLGVVRARDSATAIDVAMALANGRRMKGGAVGILSVAGGLAV
FT                   ELSDLLEMDGFTVPRFDPDTLERLKAKVPEFGASRNPIDLSGAILTQESLFEEVLNLFA
FT                   RARNLDGFAIISTFIRNPAFAHAIVRMYRSTDKPVVVCWTGTPEQTPESLEILTRSGIP
FT                   IYGDTGRVALALRAIRGDTDIS"
FT   misc_feature    1317..1664
FT                   /note="HMMPfam hit to PF02629, CoA binding domain, score
FT                   4.3e-05"
FT   CDS             2700..3413
FT                   /transl_table=11
FT                   /locus_tag="BPP0661"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Archaeoglobus fulgidus hypothetical
FT                   protein Af1211 SWALL:O29057 (EMBL:AE001020) (685 aa) fasta
FT                   scores: E(): 9.6e-16, 37.63% id in 186 aa, and to
FT                   Pyrococcus furiosus hypothetical protein Pf1837
FT                   SWALL:AAL81961 (EMBL:AE010279) (236 aa) fasta scores: E():
FT                   4e-15, 33.04% id in 233 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1M5"
FT                   /protein_id="CAE40070.1"
FT                   /translation="MSTAISMAGAGTKLDEIDLLLQQWIDAGRQVVHEADSKRILAMAG
FT                   FPVPGEARGGPAVVKLCADEALHKSELGLVALDVAPGDVERARRELQERSRRAGVAGGE
FT                   VLVESMVGDVLMEWFVGCRTDHTFGPVVVVGAGGIYAELLGAPEIRMAPLSARDAERAL
FT                   RHHKAFPIIDGARGREPADIGAFARLIADVSEFYYRRSHLIAELDLNPVMVRGRHLDPG
FT                   MVVADASIILQKPTF"
FT   CDS             complement(3388..4344)
FT                   /transl_table=11
FT                   /locus_tag="BPP0662"
FT                   /product="LysR-family transcriptional regulator"
FT                   /note="Similar to Escherichia coli and Escherichia coli
FT                   O157:H7 glycine cleavage system transcriptional activator
FT                   GcvA or B2808 or Z4125 or Ecs3668 SWALL:GCVA_ECOLI
FT                   (SWALL:P32064) (305 aa) fasta scores: E(): 4e-27, 32.33% id
FT                   in 300 aa, and to Rhizobium loti glycine cleavage system
FT                   transcription activator Mlr1973 SWALL:Q98JE9
FT                   (EMBL:AP002998) (303 aa) fasta scores: E(): 2.2e-28, 36.33%
FT                   id in 300 aa"
FT                   /db_xref="GOA:Q7W1M4"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1M4"
FT                   /protein_id="CAE40071.1"
FT                   /translation="MQRMPPLNALRSFESAARHESFLKAAAELHVTPGAVSRLVKSLES
FT                   YLGVELFMRSHRGVAITPQGKAFAEDILEAFNKIGIATDRVQQHPGDRGLSICCHPTFA
FT                   AHWLTPRWAQVQAALPSTQINVKTTLAPELESTDDYDFVVKLGPDPAAEQACSGGVAAE
FT                   RVLDVETFPICSSAFLQRHGGELGLDDIERYPLIHAQLRPQDWNRWLQSVGQPALRQAP
FT                   ALVFESLTLAYNAAMSGAGMAIGIHAFIADDIASGRLVAPFPQVRKSHMGFNIYFNAQR
FT                   AARVPRIEQIRRWMVQERNKTRATDTAAALRKSAFAE"
FT   misc_feature    complement(3445..4083)
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 3.7e-16"
FT   misc_feature    complement(4147..4326)
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 6e-23"
FT   misc_feature    complement(4192..4284)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   CDS             complement(4564..5421)
FT                   /transl_table=11
FT                   /locus_tag="BPP0663"
FT                   /product="putative hydrolase"
FT                   /note="Similar to Ralstonia solanacearum putative hydrolase
FT                   protein Rsp0790 or Rs01917 SWALL:Q8XRP1 (EMBL:AL646080)
FT                   (305 aa) fasta scores: E(): 2.3e-16, 33.61% id in 238 aa,
FT                   and to Streptomyces coelicolor putative hydrolase Sco4395
FT                   or Scd10.27 SWALL:Q9K3V0 (EMBL:AL359988) (352 aa) fasta
FT                   scores: E(): 4.5e-15, 31% id in 258 aa"
FT                   /db_xref="GOA:Q7W1M3"
FT                   /db_xref="InterPro:IPR002410"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1M3"
FT                   /protein_id="CAE40072.1"
FT                   /translation="MQRRDYRLAHAGLDFHVTEWGSPQGLPVVMLHGIRGYAETFAGIA
FT                   AALQPEYRVIAFDQRGRGRTDWDADCNYYTDTYVADLAAVADQLSLARFDLLGHSMGGI
FT                   NAIVYAARHPGRVGRLVVEDAGPGAFEDSDGARRIRRELAETPAGFASWDAASDFMRSL
FT                   RPSVSEQARQQRLESMLKPAPEGGYVWRYDHAGIARTRLHPDPARVVDLAAYVARIGCP
FT                   TLLLRGGRSDYLQPAMVERMRALNPRIEAVEIADAGHYIHDDQPAAFARHVCRFLKPHA
FT                   PAGA"
FT   misc_feature    complement(4591..5268)
FT                   /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold,
FT                   score 1e-25"
FT   CDS             complement(5447..6049)
FT                   /transl_table=11
FT                   /locus_tag="BPP0664"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Rhizobium loti hypothetical protein
FT                   Mlr6789 SWALL:Q988D2 (EMBL:AP003010) (196 aa) fasta scores:
FT                   E(): 3e-22, 38.71% id in 186 aa, and to Agrobacterium
FT                   tumefaciens hypothetical protein Atu4237 or Agr_l_1248
FT                   SWALL:AAK89202 (EMBL:AE009353) (200 aa) fasta scores: E():
FT                   2.1e-14, 39.08% id in 197 aa"
FT                   /db_xref="InterPro:IPR009569"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1M2"
FT                   /protein_id="CAE40073.1"
FT                   /translation="MKTPNFSVYHIRKWYLQVEDTLAGETGAPADGEPLRKIVLAACIH
FT                   NPYAGKYVEDLTLWIDASPGLGAEFGRRVREAAQGQAIASYGKACLVGADGEYEHGNAL
FT                   LTNPAANPVRDALGGAKSWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDG
FT                   PNRDEVVLIWAFATRGRLNARLGGLAACDVQGHDGLN"
FT   misc_feature    complement(5582..5611)
FT                   /note="PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family
FT                   signature 1."
FT   CDS             complement(6090..7124)
FT                   /transl_table=11
FT                   /locus_tag="BPP0665"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Ralstonia solanacearum hypothetical
FT                   protein Rsp1343 or Rs04767 or Rsp1312 or Rs05665
FT                   SWALL:Q8XFV7 (EMBL:AL646084) (388 aa) fasta scores: E():
FT                   1e-06, 28.44% id in 327 aa, and to Streptomyces coelicolor
FT                   putative oxidoreductase Sco6723 or Sc5f2a.06 SWALL:Q9X7M9
FT                   (EMBL:AL049587) (348 aa) fasta scores: E(): 9.5e-06, 28% id
FT                   in 300 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1M1"
FT                   /protein_id="CAE40074.1"
FT                   /translation="MQGTILVGTAGQGILRSNDNGASWHRLGLKEAIEFDGTVRSLAVD
FT                   PANPARVLAGADAGICLSTDGGAHFSLVDSPANGQTIWSVAFSPRDPRLVFAGSGAPSR
FT                   ARMYRSRDGGQSWEQLSPELPEFCSGVHRPRILTVCAHPEQAEEVWFGVEEGGAWRSTD
FT                   AGDTWERIDAPGRGINNSDIHSITLLPAASGQPATQIVVTVNSVCQSVDEARSFDCQAS
FT                   RERFDGLYYTRAVYPLDAAGQTLLLAVGDGTPGTRTRIYRSEDRGRSWAPALLHTAPNS
FT                   TVWAFGAHPSDPALVFAGTKYGHLLRSTDGGRSWYKEWRDFSEITSVAWTPHVAPVHAH
FT                   PQSI"
FT   misc_feature    complement(6174..6209)
FT                   /note="HMMPfam hit to PF02012, BNR/Asp-box repeat, score
FT                   3.5"
FT   misc_feature    complement(6309..6344)
FT                   /note="HMMPfam hit to PF02012, BNR/Asp-box repeat, score
FT                   15"
FT   misc_feature    complement(6615..6650)
FT                   /note="HMMPfam hit to PF02012, BNR/Asp-box repeat, score
FT                   1.2"
FT   misc_feature    complement(6768..6803)
FT                   /note="HMMPfam hit to PF02012, BNR/Asp-box repeat, score
FT                   0.45"
FT   misc_feature    complement(6909..6944)
FT                   /note="HMMPfam hit to PF02012, BNR/Asp-box repeat, score
FT                   1.5e+02"
FT   misc_feature    complement(7047..7082)
FT                   /note="HMMPfam hit to PF02012, BNR/Asp-box repeat, score
FT                   14"
FT   CDS             7377..8015
FT                   /transl_table=11
FT                   /gene="gst"
FT                   /locus_tag="BPP0666"
FT                   /product="glutathione S-transferase"
FT                   /EC_number="2.5.1.18"
FT                   /note="Similar to Escherichia coli and Escherichia coli
FT                   O157:H7 glutathione S-transferase Gst or B1635 or z2647 or
FT                   ecs2344 SWALL:GT_ECOLI (SWALL:P39100) (201 aa) fasta
FT                   scores: E(): 5.8e-28, 41.41% id in 198 aa, and to Yersinia
FT                   pestis glutathione S-transferase Gst or Ypo2367
FT                   SWALL:Q8ZE22 (EMBL:AJ414152) (201 aa) fasta scores: E():
FT                   3e-31, 43.28% id in 201 aa"
FT                   /db_xref="GOA:Q7W1M0"
FT                   /db_xref="HSSP:1N2A"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1M0"
FT                   /protein_id="CAE40075.1"
FT                   /translation="MKFYHEVRGCSLAVDIVARELGLALDLQWVDMANKRLADGSDYLK
FT                   VNSKGTVPTLELPDGQFLSEDAVIMQYLADQRPQQGMLPAAGTLARYRVLEWMSFIAAD
FT                   LHKGGFMPLFKAITPPEYRRIARQYLDGRLQWLNDQLAGREFLMGETFTIADAHCYTIA
FT                   MWTRAHDIDTSAWPHLEAYLARVGARPSVRAAEQAARDEGERQRAAAAR"
FT   misc_feature    7383..7601
FT                   /note="HMMPfam hit to PF02798, Glutathione S-transferase,
FT                   N-terminal domain, score 1.5e-05"
FT   misc_feature    7629..7946
FT                   /note="HMMPfam hit to PF00043, Glutathione S-transferase,
FT                   C-terminal domain, score 1.9e-14"
FT   CDS             8053..9018
FT                   /transl_table=11
FT                   /locus_tag="BPP0667"
FT                   /product="putative exported protein"
FT                   /note="Similar to Agrobacterium tumefaciens hypothetical
FT                   protein Atu4727 or Agr_l_312 SWALL:AAK88723 (EMBL:AE009401)
FT                   (329 aa) fasta scores: E(): 6.1e-38, 40.82% id in 316 aa,
FT                   and to Ralstonia solanacearum putative signal peptide
FT                   protein Rsc3088 or Rs00540 SWALL:Q8XUU5 (EMBL:AL646073)
FT                   (317 aa) fasta scores: E(): 2.6e-37, 42.02% id in 307 aa"
FT                   /db_xref="GOA:Q7W1L9"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L9"
FT                   /protein_id="CAE40076.1"
FT                   /translation="MNWTKRIAIVLAGLAAAPLALAADPAAPLKLVVGFPPGGGTDGAA
FT                   RIVAEHLPQQLGRPVVVENRAGAAGTLGAQAVRRAPPDGNTLFFGTSAELLINPITRKT
FT                   APYDVQKDFMPVTEVGSVAFVLVAPASSTVRSVPDLIAAAKARPGKLNFSSFGMGSTNH
FT                   LIGELFLSTTGISASHIPYQGSAQAMTALLAGDVNFTFDTVAVAQPHIQSGKLIALATP
FT                   SPARLAELPEVPTLRELGYADLTAEGWMGIFAPVGTPPQDIASLNAAFAKVLALPDVRA
FT                   KLAARGVGIVGGSPEQYRDKLATESRKWRQVAQDSGISLE"
FT   misc_feature    8053..8118
FT                   /note="Signal peptide predicted for BPP0667 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.989 between residues 22 and 23"
FT   misc_feature    8182..9006
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 1.9e-98"
FT   CDS             complement(9064..10050)
FT                   /transl_table=11
FT                   /locus_tag="BPP0668"
FT                   /product="putative exported protein"
FT                   /note="Similar to Agrobacterium tumefaciens hypothetical
FT                   protein Atu4727 or Agr_l_312 SWALL:AAL45521 (EMBL:AE009401)
FT                   (329 aa) fasta scores: E(): 3.5e-29, 37.07% id in 321 aa,
FT                   and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9
FT                   (EMBL:AB029044) (326 aa) fasta scores: E(): 5.6e-21, 35.92%
FT                   id in 270 aa"
FT                   /db_xref="GOA:Q7W1L8"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L8"
FT                   /protein_id="CAE40077.1"
FT                   /translation="MKRRTFNIGLLGLMASGALVRTRPAMAQDAALPSLVTLVAPFAPG
FT                   GGADQLAREFAHFAQSRAPGTTFVVENKPGANGAIAARHVARQQPDGATLLLGTSSTHA
FT                   LGPLIAKADPALIVKEFSPVTLLATTANVLAVASTSRWKTLDDFVADARGQALTYGTFG
FT                   TGSSAHLYGLLLAQSTGARLSHVPYKGSSQAATDLLGGHIDAVFLTSSALEGLAREGKV
FT                   RVLGVTGKTRTRVFPDARTFEEQRVAQLDFSGWFGLFAPAGTPAPRREAIAALAASLGK
FT                   DAAASQRMTGQGYDWVGSSPQALQDSLLDTLGIYQKVLATRPDGLGG"
FT   misc_feature    complement(9073..9900)
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 4.7e-44"
FT   misc_feature    complement(9970..10050)
FT                   /note="Signal peptide predicted for BPP0668 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 1.000 between residues 27 and 28"
FT   CDS             complement(10193..10891)
FT                   /transl_table=11
FT                   /locus_tag="BPP0669"
FT                   /product="putative GntR-family transcriptional regulator"
FT                   /note="Similar to Yersinia pestis putative GntR-family
FT                   transcriptional regulatory protein Ypo3651 SWALL:Q8ZAY1
FT                   (EMBL:AJ414158) (220 aa) fasta scores: E(): 5.3e-27, 45.63%
FT                   id in 206 aa, and to Rhizobium loti transcriptional
FT                   regulator Mll6786 SWALL:Q988D5 (EMBL:AP003010) (223 aa)
FT                   fasta scores: E(): 5.2e-22, 43.84% id in 203 aa"
FT                   /db_xref="GOA:Q7W1L7"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L7"
FT                   /protein_id="CAE40078.1"
FT                   /translation="MRMMEPDVPHDGATDDKASMPLRRQAEDALRKTILSGRFMPGERL
FT                   KERELMELLNASRTLVREALRQVEAEGLIEIVPNRGPVVAVLSYEEAEEIYEVRGILEA
FT                   QTCTGFALRAGSGHMKTLGAAFDALSEAARQGDIPRTLTLSDTFYHTIAAGCGNRLLGN
FT                   MLRQLHNRIVLLRRTSLSEPSRLPETLYELTQIFEALKARDEIAAGKAALHHVRQASRT
FT                   ALQVLRSRQS"
FT   misc_feature    complement(10640..10816)
FT                   /note="HMMPfam hit to PF00392, Bacterial regulatory
FT                   proteins, gntR family, score 1.6e-12"
FT   CDS             11105..12628
FT                   /transl_table=11
FT                   /locus_tag="BPP0670"
FT                   /product="probable aldehyde dehydrogenase"
FT                   /note="Similar to Escherichia coli succinate-semialdehyde
FT                   dehydrogenase [NADP+] GabD or B2661 SWALL:GABD_ECOLI
FT                   (SWALL:P25526) (482 aa) fasta scores: E(): 6.1e-40, 32.1%
FT                   id in 461 aa, and to Rhizobium meliloti putative aldehyde
FT                   dehydrogenase transmembrane protein R03290 or Smc04385
FT                   SWALL:Q92L07 (EMBL:AL591793) (510 aa) fasta scores: E():
FT                   2e-129, 68.87% id in 498 aa"
FT                   /db_xref="GOA:Q7W1L6"
FT                   /db_xref="InterPro:IPR016162"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L6"
FT                   /protein_id="CAE40079.1"
FT                   /translation="MTTVHSATPEETRRLLQQLGVDPARYDGGTLEVRSPIDGQAIARL
FT                   PELTAEQARARVADARQAFLAWRKVPAPRRGELVRLLGEELRAAKAELGRLVSIETGKI
FT                   LSEGEVQEMIDICDFATGLSRQLYGLTIATERAEHRMMETWHPAGPVAIISAFNFPVAV
FT                   WAWNAAIALVCGDSLLWKPSEKAPLTALATQALLERALARFGDAPAHLSQVLIGGREVG
FT                   EALVDDPRIPIVSATGSTAMGRKVGPKVAERFGRSILELGGNNAAIICPSANLDLALCG
FT                   IAFSAMGTAGQRCTSLRRIFVHEQIADDLVARLQQVYESVAIGDPRDSGTLIGPLRDQA
FT                   AFDAMQRSLADARAAGGRVTGGAREPVGGHDQAYYARPALVEMPAQSEVVERETFAPIL
FT                   YVMRYRDLDEAIALQNDVPQGLSSSIFTNDLREAERFVSAEGSDCGIANVNIGPSGAEI
FT                   GGAFGGEKETGGGREAGSDSWKAYMRRTTNTVNYGNALPLAQGVKFDVA"
FT   misc_feature    11186..12580
FT                   /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase
FT                   family, score 4.6e-128"
FT   misc_feature    11879..11902
FT                   /note="PS00687 Aldehyde dehydrogenases glutamic acid active
FT                   site."
FT   CDS             12645..13808
FT                   /transl_table=11
FT                   /gene="metC"
FT                   /locus_tag="BPP0671"
FT                   /product="cystathionine beta-lyase"
FT                   /EC_number="4.4.1.8"
FT                   /note="Similar to Escherichia coli cystathionine beta-lyase
FT                   MetC or B3008 SWALL:METC_ECOLI (SWALL:P06721) (395 aa)
FT                   fasta scores: E(): 1.7e-59, 43.07% id in 390 aa, and to
FT                   Rhizobium meliloti probable cystathionine beta-lyase
FT                   protein MetC or R01479 or Smc02117 SWALL:Q92Q70
FT                   (EMBL:AL591787) (395 aa) fasta scores: E(): 7.5e-66, 47.54%
FT                   id in 387 aa"
FT                   /db_xref="GOA:Q7W1L5"
FT                   /db_xref="HSSP:1CL2"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L5"
FT                   /protein_id="CAE40080.1"
FT                   /translation="MKPDTRLVHLGRDPERFEGLVNIPPCRTSTFLHASVADYQAAASR
FT                   KQDSLYYGRFGSQTSRALEAACTELDGGHGAMLFPCGLAAITRVLGSLLEPGQYLLMAD
FT                   TVYGPARAFCEQELARLGVETTWYAPDADLDALVRPATRVIYGEAPGSLTFEMQDLRAL
FT                   AEVARRHGLVSVVDNTWATSWFCQPLALGIDISIQSASKYIVGHSDAMLGVAVANEAQF
FT                   PALRRAAAQYGNAVSPDDCYMALRGLRTLGVRLERHQASALRVAQWLRTRAEVEQVLHP
FT                   ALPDSPGHALWRRDFSGASGLFGVAFRAGDDAALARFVDDLRLFGIGVSWGGFESLALP
FT                   SHPVRNTSAAALGGRPLVRLHIGLEDPDDLIADLARALDRHMAAARG"
FT   misc_feature    12654..13781
FT                   /note="HMMPfam hit to PF01053, Cys/Met metabolism
FT                   PLP-dependent enzyme, score 8.1e-112"
FT   CDS             13839..14189
FT                   /transl_table=11
FT                   /locus_tag="BPP0672"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Rhizobium meliloti hypothetical protein
FT                   R00736 or Smc00791 SWALL:Q92RV5 (EMBL:AL591784) (114 aa)
FT                   fasta scores: E(): 2.1e-18, 54.86% id in 113 aa, and to
FT                   Neisseria meningitidis hypothetical protein Nma1463
FT                   SWALL:Q9JU73 (EMBL:AL162756) (120 aa) fasta scores: E():
FT                   3.9e-16, 45.61% id in 114 aa"
FT                   /db_xref="HSSP:1NQ3"
FT                   /db_xref="InterPro:IPR006175"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L4"
FT                   /protein_id="CAE40081.1"
FT                   /translation="MSDIQYVETSPCYSKAVIHGDTVYLAGQVADDPGGTVQDQMRQIL
FT                   AQIDALLARCGTDKSRLLSAMVLLKDMRDLEAINPLWDAWVVPGRAPTRTPSEARLALP
FT                   GYLVEVQVTAAR"
FT   misc_feature    13857..14183
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF01042, YjgF family, score 4.3e-19"
FT   CDS             14492..15451
FT                   /transl_table=11
FT                   /locus_tag="BPP0673"
FT                   /product="putative exported protein"
FT                   /note="Similar to Bacillus halodurans hypothetical protein
FT                   Bh2007 SWALL:Q9KBC1 (EMBL:AP001514) (339 aa) fasta scores:
FT                   E(): 1.6e-26, 32.43% id in 296 aa, and to Alcaligenes
FT                   eutrophus hypothetical 35.6 kDa protein in gbd 5'region
FT                   precursor SWALL:YGB7_ALCEU (SWALL:Q44018) (327 aa) fasta
FT                   scores: E(): 5.2e-22, 29.61% id in 314 aa"
FT                   /db_xref="GOA:Q7W1L3"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L3"
FT                   /protein_id="CAE40082.1"
FT                   /translation="MKKLIVAALFAVLPSMVGAQQAPRGTMTIVNPFTVSGLTDLVARM
FT                   VAEKAHAKFPDGVAVVSRPGGGGSIGIASVVNARPDGSSIGFTPTGAVVDAPQMMKGLA
FT                   YKTPDDIDPIINVFSSYQMLAVRGDADWKTAQDFIKAVRQSPGKYSLGHTGNGTASHLN
FT                   MAQLVQAAKLNVLEVPYKGWAQSSVALLGGYVDAIVINAGEGRALVDEGRLRILGVFQA
FT                   QRVPYHPDVPTFKEIGYDVGVGLKFFFFGPRNMDAGVKQYIHDAFKQAMQNDDFKKFIA
FT                   SREVEVDYMDGAQTKAMLWSEYKQHTKLLDSLGLLAKQ"
FT   misc_feature    14492..14548
FT                   /note="Signal peptide predicted for BPP0673 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.961 between residues 19 and 20"
FT   misc_feature    14615..15436
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 3.5e-36"
FT   CDS             15476..16588
FT                   /transl_table=11
FT                   /locus_tag="BPP0674"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Yersinia pestis hypothetical protein
FT                   Ypo1516 SWALL:Q8ZG04 (EMBL:AJ414148) (418 aa) fasta scores:
FT                   E(): 4.1e-27, 30.97% id in 410 aa"
FT                   /db_xref="InterPro:IPR013211"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L2"
FT                   /protein_id="CAE40083.1"
FT                   /translation="MASIKGLREVAYFDCAGGGQVYVQGNYAYIAHMDAPAGTTIVDIS
FT                   DPRHPRQVAHIPIPDGVHTHKVRVENDLMLVNWECPPPYILGENFQGGLAIYDVSDPTN
FT                   PRQICFWKTAGTGVHRFDFDGRHTYITPEVEGYHLNIAMILDLENPAKPREVGRWWMPG
FT                   QWVAGGETPDEGYRMTWCHQVLRRGNRLYVAYWHGGMVILDIEDMSKPKLVSKFAYSPA
FT                   FAHPTHTVLPLPFELAGRKIAIVADEDVRKVRPSPPPFMWLFDITDETQPVPISTYQIE
FT                   ELMDKNMPEFTGCHQPAEQVYGTEIPVAWFAKGLRVVDVKNPHAPREVAHFEPDIPGFD
FT                   RAQTNDVFLTKEGLMYIIDRNRGMHILERI"
FT   CDS             16603..17625
FT                   /transl_table=11
FT                   /locus_tag="BPP0675"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Rhizobium meliloti hypothetical protein
FT                   R02870 or Smc02978 SWALL:Q92LZ1 (EMBL:AL591792) (368 aa)
FT                   fasta scores: E(): 9.2e-57, 58.51% id in 364 aa, and to
FT                   Brucella melitensis low affinity zinc transport membrane
FT                   protein Bmeii0308 SWALL:Q8YD69 (EMBL:AE009669) (372 aa)
FT                   fasta scores: E(): 7e-57, 60.71% id in 364 aa"
FT                   /db_xref="InterPro:IPR011629"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L1"
FT                   /protein_id="CAE40084.1"
FT                   /translation="MSEATRKVPVTVLTGHLGAGKTTLLNRILTGQHGRKYAVIVNEFG
FT                   EIGIDNDLIVESDEEIYEMNNGCICCTVRGDLIGILHKLLRRPGRFDAIVVETTGVADP
FT                   APVVQTFMMDEEVREKTELDAVITMVDAKHFPLRLADSQEAEDQIVYADVVLINKVDLV
FT                   SAGEADQVQRRVAAINPYAACHRVQRAEIDLARILSIGAFDLQRCVELEARAAPAGCGH
FT                   EHEHDAHCQGGTDHHHHHHEISVMSVSLQAGALDGRRFFPWIHSLVEKQGPDILRMKGI
FT                   LALDDDARRYIIQGVHMIVEGEHQRAWRDDEPRASKLVFIGRGLDAQALRAGFEACRSQ
FT                   "
FT   misc_feature    16645..16668
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    16717..17568
FT                   /note="HMMPfam hit to PF02492, Cobalamin synthesis
FT                   protein/P47K, score 5.4e-62"
FT   CDS             17622..18623
FT                   /transl_table=11
FT                   /locus_tag="BPP0676"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Brucella melitensis vegetatible
FT                   incompatibility protein Het-e-1 bmeii0307 SWALL:Q8YD70
FT                   (EMBL:AE009669) (324 aa) fasta scores: E(): 2.2e-45, 39.45%
FT                   id in 327 aa, and to Rhizobium meliloti hypothetical
FT                   protein R02871 or Smc02979 SWALL:Q92JW5 (EMBL:AL591792)
FT                   (329 aa) fasta scores: E(): 1.2e-40, 38.36% id in 331 aa"
FT                   /db_xref="InterPro:IPR015943"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1L0"
FT                   /protein_id="CAE40085.1"
FT                   /translation="MKMLNRLDLGVPCLRAGFAGEQAFFLAMDGRLHVQQGDQRRVVAL
FT                   HDGDVLSACAAPGQADAAAWLLSAGEDGRVMRAGAGEPDCVASVPNKWVTALAVAADGA
FT                   LAYASGRTVWLAGGGGEAAALPQERPVQALRFSHGGRWLAVAGYDGLALYDRQAGGEPQ
FT                   RLDWKGMPTRVAFSPDDRFVLVATRDAVLHGWRLDTLRHFRMVGYPRAVGSWSWLAGGQ
FT                   WLATDGSAGAVLWPFEGEEGPIGSTPLALGERPDGEVSAVACHPARPWVAVGYADGLMV
FT                   LESTDGALRRILGQAGRDRVACLAWDRAGARLAYGTPSGACGVIQADTGEEG"
FT   CDS             18626..18916
FT                   /transl_table=11
FT                   /locus_tag="BPP0677"
FT                   /product="hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K9"
FT                   /protein_id="CAE40086.1"
FT                   /translation="MCAEVDYEDRGTYRKVPPPSEALVERTRQVEAGMPGERVPEQAWG
FT                   TFFAVSCGVMDMGSFQRMFEARRIALSYLAMQRARYARRHGGGTGLRCIGD"
FT   CDS             19006..19749
FT                   /transl_table=11
FT                   /locus_tag="BPP0678"
FT                   /product="transcriptional regulator"
FT                   /note="Similar to Escherichia coli transcriptional
FT                   regulator KdgR or B1827 SWALL:KDGR_ECOLI (SWALL:P76268)
FT                   (263 aa) fasta scores: E(): 1.3e-22, 36.32% id in 245 aa,
FT                   and to Bacillus halodurans transcriptional regulator KdgR
FT                   or Bh3725 SWALL:Q9K6K4 (EMBL:AP001519) (251 aa) fasta
FT                   scores: E(): 7.5e-28, 38.34% id in 253 aa"
FT                   /db_xref="GOA:Q7W1K8"
FT                   /db_xref="InterPro:IPR005471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K8"
FT                   /protein_id="CAE40087.1"
FT                   /translation="MGKTLVKGLHLLERLAASPEPMGITELAADLDLVQSNVHRLLQTL
FT                   MESGYVQQDALTRRYRCTMRLWEMGTQIADRMDLSRIARPHMQALVKQSQETVHLAILD
FT                   GADVLYIDKIDSPQPVRSYTRVGGRAPAYCTGTGKMLLAYCDDLAAALPAKLVKHTARS
FT                   IASHAALKAELRRVREEGFSENAGEWREDVYGMGAPLFDATGKVSAAIGISGPLARMDA
FT                   AVVARVRPMLQETARIISRELGYRG"
FT   misc_feature    19183..19731
FT                   /note="HMMPfam hit to PF01614, Bacterial transcriptional
FT                   regulator, score 8.3e-54"
FT   CDS             20142..21032
FT                   /transl_table=11
FT                   /gene="dapA"
FT                   /locus_tag="BPP0679"
FT                   /product="dihydrodipicolinate synthase"
FT                   /EC_number="4.2.1.52"
FT                   /note="Similar to Escherichia coli dihydrodipicolinate
FT                   synthase DapA or B2478 SWALL:DAPA_ECOLI (SWALL:P05640) (292
FT                   aa) fasta scores: E(): 6.6e-20, 30.37% id in 270 aa, and to
FT                   Brucella melitensis dihydrodipicolinate synthase Bmei1301
FT                   SWALL:Q8YG60 (EMBL:AE009568) (307 aa) fasta scores: E():
FT                   9.5e-27, 34.82% id in 290 aa"
FT                   /db_xref="GOA:Q7W1K7"
FT                   /db_xref="HSSP:1O5K"
FT                   /db_xref="InterPro:IPR002220"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K7"
FT                   /protein_id="CAE40088.1"
FT                   /translation="MLISARTLRGIITATPTPFTREGGVDREVLRSHIEFLIGRGAAGL
FT                   APLGGTGEYPALCARERADVVRWTVEAARGRVPVVAGVLATGYEDAVQAGLAAREAGAD
FT                   ALMVVTPYYALAGDAGVRAYFERYRAAVDLPIVLYEIPRRTNVELRAETIAAMAGDGTI
FT                   VGIKYSGSDFAKLTRLIHLAGDTLAVLSGEEPLFPAAVALGAVGGVLAMSNLDPAPWAR
FT                   IQSLVESGEMAQALQLHHRQGALADAVYSEMNPVGLKAALQLKGFAFGEARLPLQPAGP
FT                   QTLLRLQQAFEALES"
FT   misc_feature    20160..21026
FT                   /note="HMMPfam hit to PF00701, Dihydrodipicolinate
FT                   synthetase family, score 1.1e-59"
FT   CDS             21033..22268
FT                   /transl_table=11
FT                   /gene="aatB"
FT                   /locus_tag="BPP0680"
FT                   /product="aspartate aminotransferase"
FT                   /EC_number="2.6.1.1"
FT                   /note="Similar to Rhizobium meliloti aspartate
FT                   aminotransferase B aatB SWALL:AAB2_RHIME (SWALL:Q06191)
FT                   (410 aa) fasta scores: E(): 1.8e-61, 46.07% id in 395 aa,
FT                   and to Ralstonia solanacearum probable aspartate
FT                   aminotransferase a protein AatA1 or Rsp1232 or Rs03176
FT                   SWALL:Q8XQJ3 (EMBL:AL646083) (404 aa) fasta scores: E():
FT                   3e-62, 49.48% id in 386 aa"
FT                   /db_xref="GOA:Q7W1K6"
FT                   /db_xref="HSSP:5BJ4"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K6"
FT                   /protein_id="CAE40089.1"
FT                   /translation="MNTISDSAAVAAGRRVAARMARVTTSKIYLAIAKVADMQAQGMQV
FT                   ASLTAGEPDFDTPAHVIEAAVQAMRGGDTHYTPVRGSLAMREAVRQKFQRENGLAFRDE
FT                   EVMVGTGSKQVIANALAVTLETGDEVLLPVPYWAAYTGMVYAAGGVPTFVGTRAEDGYK
FT                   LTPQALRAALGPRTRWVILNTPSNPSGLVYGSDELRALGEVLRERPDVLILTDEIYEHL
FT                   NYTAEPPASLRKLCPDLAERIVVVNGVSKAYAMTGWRLGFAGGPADIIEAMANLQAQTT
FT                   LAPCSISQAAAVAALNGPRESIDAMAAAYRRRRDLVMQIAGGQSGVRLQRPDGAFYAML
FT                   DLSEALAGGERFRGDPEPDQAFCEWLLETRHVAAVPGSVFGAPGSVRISFATDEQTIER
FT                   GLTGLLDAAAHC"
FT   misc_feature    21303..22256
FT                   /note="HMMPfam hit to PF00155, Aminotransferase class I and
FT                   II, score 3.3e-55"
FT   misc_feature    21774..21815
FT                   /note="PS00105 Aminotransferases class-I
FT                   pyridoxal-phosphate attachment site."
FT   CDS             22353..23183
FT                   /transl_table=11
FT                   /locus_tag="BPP0681"
FT                   /product="probable solute-binding periplasmic protein"
FT                   /note="Similar to Escherichia coli cystine-binding
FT                   periplasmic protein precursor FliY or B1920
FT                   SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E():
FT                   5.1e-23, 30.64% id in 248 aa, and to Salmonella typhi
FT                   cystine-binding periplasmic protein FliY or Sty2162
FT                   SWALL:Q8Z5S8 (EMBL:AL627272) (266 aa) fasta scores: E():
FT                   1.1e-23, 32.25% id in 248 aa"
FT                   /db_xref="GOA:Q7W1K5"
FT                   /db_xref="InterPro:IPR001638"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K5"
FT                   /protein_id="CAE40090.1"
FT                   /translation="MNAVIRKMPAMLKWLMAVPLALGLAHAHAETVLEKARAKNEIRIA
FT                   TSDSLKPWGYMDDTNKPIGFNLDVSREMGKRMGFGKVTFVTDSYKNFISGLNADRYDMV
FT                   VAILTPTEERRKSADFSNPYMVVSKNIFVRDDNTSIRSLEDLAGKRLGVAAGTTDEAWA
FT                   RQHVKDAQIRVYDNFFLALQDLAIGRVDARITDRVTGMTAAKEGRFPVKIAGPDLSQDI
FT                   GAIAYKKGQDDLAAIVNKVIQEMVDDGSLNEISRKWLAGIEMGEELKKLPKDAR"
FT   misc_feature    22353..22439
FT                   /note="Signal peptide predicted for BPP0681 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.735 between residues 29 and 30"
FT   misc_feature    22476..23135
FT                   /note="HMMPfam hit to PF00497, Bacterial extracellular
FT                   solute-binding proteins, family 3, score 4.5e-59"
FT   CDS             23180..23830
FT                   /transl_table=11
FT                   /locus_tag="BPP0682"
FT                   /product="putative permease component of ABC transporter"
FT                   /note="Similar to Salmonella typhimurium and Salmonella
FT                   typhi putative ABC-type amino acid transporter, permease
FT                   component yecs or stm1952 or sty2160 SWALL:Q8XET2
FT                   (EMBL:AE008786) (222 aa) fasta scores: E(): 3.1e-34, 46.47%
FT                   id in 213 aa, and to Escherichia coli O157:H7 putative
FT                   transport system permease protein YecS or Z3006 or Ecs2656
FT                   SWALL:Q8XBC8 (EMBL:AE005414) (222 aa) fasta scores: E():
FT                   1.8e-33, 44.34% id in 212 aa"
FT                   /db_xref="GOA:Q7W1K4"
FT                   /db_xref="InterPro:IPR010065"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K4"
FT                   /protein_id="CAE40091.1"
FT                   /translation="MIELLHKAAPIIQGALLMTLLLGLSSAVLGTALGLVLALFRLSPV
FT                   APLRWLAFWYVSIFRGTPLLLQLLLIYFGLPHYGIELEPVPTAILALLLCSAAYLSENF
FT                   RSGILGVDRGQIEAAQSLGMGAARSLFRIILPQAIRIAAPTMGTRYIALMKDTSLASTI
FT                   TVVKLTKMAEQIGSNTFRYMEMFIIAGALYWVINQMLTFIQVWVESKLGKGVA"
FT   misc_feature    23180..23269
FT                   /note="Signal peptide predicted for BPP0682 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.937) with cleavage site
FT                   probability 0.645 between residues 30 and 31"
FT   misc_feature    join(23222..23290,23327..23395,23438..23506,23732..23800)
FT                   /note="4 probable transmembrane helices predicted for
FT                   BPP0682 by TMHMM2.0 at aa 15-37, 50-72, 87-109 and 185-207"
FT   misc_feature    23498..23722
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 1.2e-13"
FT   misc_feature    23501..23587
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   CDS             23830..24606
FT                   /transl_table=11
FT                   /locus_tag="BPP0683"
FT                   /product="putative ATP-binding component of ABC
FT                   transporter"
FT                   /note="Similar to Agrobacterium tumefaciens octopine
FT                   permease ATP-binding protein p occP SWALL:OCCP_AGRTU
FT                   (SWALL:P35117) (262 aa) fasta scores: E(): 5.5e-41, 53.2%
FT                   id in 250 aa, and to Yersinia pestis putative amino-acid
FT                   ABC transporter Ypo1848 SWALL:Q8ZF70 (EMBL:AJ414150) (253
FT                   aa) fasta scores: E(): 1.6e-40, 54.87% id in 246 aa"
FT                   /db_xref="GOA:Q7W1K3"
FT                   /db_xref="HSSP:1B0U"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K3"
FT                   /protein_id="CAE40092.1"
FT                   /translation="MQHDQAAGAPVVQVEGLRKSFGANAVLKGVDLTIRRGEVVVMGPS
FT                   GSGKTTFIRSLNFLEVPDEGAITICGTQVAVQAGAGLKREQRRRVREIRQKTAMVFQSF
FT                   NLFSHMTVIKNIIEGPVQVKGAARDQAIEQARALLRQVGLAEKENEYPSRLSGGQKQRV
FT                   AIARALAMKPEVIFFDEPTSALDPELRDEVLSVMRKLADEGMTMVVVTHEVRFARDVAD
FT                   RVIFMEGGVVLEDAPSASFFDAPASERIRQFLRRVQ"
FT   misc_feature    23938..24519
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   3.2e-60"
FT   misc_feature    23956..23979
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    24292..24336
FT                   /note="PS00211 ABC transporters family signature."
FT   CDS             24603..25808
FT                   /transl_table=11
FT                   /locus_tag="BPP0684"
FT                   /product="putative peptidase"
FT                   /note="Similar to Ralstonia solanacearum putative hippurate
FT                   hydrolase protein HipO or Rsc2871 or Rs00232 SWALL:Q8XVG0
FT                   (EMBL:AL646072) (396 aa) fasta scores: E(): 7.6e-64, 51.2%
FT                   id in 375 aa, and to Pseudomonas aeruginosa probable
FT                   hydrolase pa2922 SWALL:Q9HZS5 (EMBL:AE004718) (389 aa)
FT                   fasta scores: E(): 5e-54, 46.82% id in 378 aa"
FT                   /db_xref="GOA:Q7W1K2"
FT                   /db_xref="InterPro:IPR010168"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K2"
FT                   /protein_id="CAE40093.1"
FT                   /translation="MTAGARPGWAADPLVEAVGRETGELMRGIRHDLHAHPELSFEEHR
FT                   TAGRVRACLQEWGIPVLDGLGETAVVGVLRADMDALPIHETNTFGHASRHAGRMHACGH
FT                   DGHTAMLLGAARYLQRHPDFDGTIYLIFQPAEENGRGARAMIEAGLFRDHPMQAVFGLH
FT                   NWPGLAAGKFALTAGPIMASSSRVKVTYTGKGGHAALPEQAIDPVAAVAALHQALQTVV
FT                   TRNTAAHDSVVLSITQLGGSDNHCVIPDQAWLAGSLRTLSPAVLERTCARIRDIAQGVA
FT                   AAFSCAARIEIEHAVPATINDAGATALCRDAIVQWLGPKWLNDGFIPTMGAEDFAFMLQ
FT                   ALRGCYLMLGNGGGREGETATVCGLHNPGYDFNDEIAAVGAAYWVRLAGHCLPRGGAGP
FT                   LA"
FT   misc_feature    24666..25583
FT                   /note="HMMPfam hit to PF01546, Peptidase family
FT                   M20/M25/M40, score 2.7e-26"
FT   CDS             25881..26678
FT                   /transl_table=11
FT                   /locus_tag="BPP0685"
FT                   /product="probable transcriptional regulator"
FT                   /note="Similar to Rhodococcus opacus putative regulator of
FT                   catechol degradative operon CatR SWALL:O33539 (EMBL:X99622)
FT                   (256 aa) fasta scores: E(): 1.2e-19, 29.13% id in 254 aa,
FT                   and to Alcaligenes eutrophus hypothetical 30.8 kDa protein
FT                   SWALL:Q9L789 (EMBL:AF225972) (279 aa) fasta scores: E():
FT                   2.4e-23, 37.25% id in 255 aa"
FT                   /db_xref="GOA:Q7W1K1"
FT                   /db_xref="InterPro:IPR005471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K1"
FT                   /protein_id="CAE40094.1"
FT                   /translation="MASKKAAGEADKDHLFVNSVAKAFRLLEAFDKSRPMSGFSQAARE
FT                   IGMEKSAAQRAAHTLWRLGYLDKVGRDGEYRLSRRCLDIGQRYLETNRLVVCTNPYLKF
FT                   LRRKTNASVNLAMLDGTDTVFPVRYTSQEMLNNDLGDRARIPAYCTATGIAIFSAMPDE
FT                   AVREVLERSDLKPLMPNSIWQMDRIMERVESARRDGYVLGVEEDFASDITIACPISDPA
FT                   TGDVAAIGVSYSSEVTAVEQVVQDWCPLVMSTAREVTARLAES"
FT   misc_feature    26103..26663
FT                   /note="HMMPfam hit to PF01614, Bacterial transcriptional
FT                   regulator, score 4.6e-21"
FT   CDS             26716..27987
FT                   /transl_table=11
FT                   /gene="amaB"
FT                   /locus_tag="BPP0686"
FT                   /product="N-carbamoyl-L-amino acid amidohydrolase"
FT                   /EC_number="3.5.1.-"
FT                   /note="Similar to Bacillus stearothermophilus
FT                   N-carbamoyl-L-amino acid amidohydrolase AmaB
FT                   SWALL:AMB2_BACST (SWALL:Q53389) (409 aa) fasta scores: E():
FT                   1.9e-43, 40.2% id in 383 aa, and to Caulobacter crescentus
FT                   N-carbamyl-L-amino acid amidohydrolase Cc2603 SWALL:Q9A561
FT                   (EMBL:AE005928) (427 aa) fasta scores: E(): 4.3e-60, 48.11%
FT                   id in 397 aa"
FT                   /db_xref="GOA:Q7W1K0"
FT                   /db_xref="InterPro:IPR002933"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1K0"
FT                   /protein_id="CAE40095.1"
FT                   /translation="MTAAFASLGQTIVEQAARLASHSDMEGGLTCAYLTPAHRAAQAQL
FT                   AQWMEAAGMAVRIDAIGNVIGRYAADPAVPAPRVLMTGSHFDTVRDGGRYDGRLGILLP
FT                   VAVAGALRDAGVRLPYHLDVVAFAEEEGLRFKTSFLASGVLAGSFDPALLARQDADGVT
FT                   LAQALAASGLPGAGDPAALRAAALDPATLLGFVEVHIEQGPVLLHHGLPLGVVTQIAGS
FT                   SRFMARVEGMAGHAGTTPMNLRQDAGAAAAEMVLLVESRCSQVPTLVGTVGQLQVPNGS
FT                   GNVIPGVCQFSIDIRAAEDPVREAAVADVRAGIEQIARRRGVRVSLDAVPPVGSVPCAR
FT                   WLMDQFGAALSEAGLAVHELPSGAGHDAMVMQRIADVAMLFVRCGNGGVSHNPLETLSA
FT                   EDAQQAAEVFAAFLRRFAPRGSGR"
FT   CDS             complement(27984..29258)
FT                   /transl_table=11
FT                   /locus_tag="BPP0687"
FT                   /product="probable amidase"
FT                   /note="Similar to Bradyrhizobium japonicum malonamidase E2
FT                   SWALL:Q9ZIV5 (EMBL:AF012735) (414 aa) fasta scores: E():
FT                   2.7e-39, 37.67% id in 422 aa, and to Rhodococcus sp
FT                   enantiomerase-selective amidase AmdA SWALL:Q53116
FT                   (EMBL:M74531) (462 aa) fasta scores: E(): 7.4e-21, 31.73%
FT                   id in 438 aa"
FT                   /db_xref="GOA:Q7W1J9"
FT                   /db_xref="InterPro:IPR000120"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J9"
FT                   /protein_id="CAE40096.1"
FT                   /translation="MQPLHLLGLDEARERLMAGACDSVDLVQACLDRIAAREEQIRAWA
FT                   WVDATGALRKARAMTGARPDPRRPLAGLPIAVKDIIDTADMPTAYGSPIYAGHRPAWSA
FT                   YCVAAIETAGGIILGKTATSEFAHSAPPATRNPHAPQHTPGGSSGGSAACVADFMAPAA
FT                   LATQTGGSTIRPAAFCGVVGYKPSLGLIDRTGVKPMAESLDTVGLMARAVADIQLLAGV
FT                   LAGVPAAPPGSAAPRIGLYRTPHWERIDARSRDALLARLRHLERHGARVAEVPDLPALH
FT                   PLYQDQRDIMNQQASRALLHEYRQHREQLSPALRAALEAGRACSPGALRAAWQRTRRAR
FT                   RAYAELWADYDLIVTPAALGAAPAGIASSGDSLLNRNWSLLGVPTLSLPNGADPRGLPL
FT                   AMQLAGSHGGDAALLGWARWIEAAA"
FT   misc_feature    complement(28017..29186)
FT                   /note="HMMPfam hit to PF01425, Amidase, score 3.6e-83"
FT   misc_feature    complement(28443..28487)
FT                   /note="PS00616 Histidine acid phosphatases phosphohistidine
FT                   signature."
FT   misc_feature    complement(28896..28919)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(29267..30193)
FT                   /transl_table=11
FT                   /locus_tag="BPP0688"
FT                   /product="putative polysaccharide deacetylase"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa1517 SWALL:Q9I3J6 (EMBL:AE004580) (308 aa) fasta
FT                   scores: E(): 1.6e-63, 51.17% id in 297 aa, and to
FT                   Caulobacter crescentus hypothetical protein Cc2605
FT                   SWALL:Q9A559 (EMBL:AE005928) (304 aa) fasta scores: E():
FT                   1.7e-59, 49.15% id in 295 aa"
FT                   /db_xref="GOA:Q7W1J8"
FT                   /db_xref="InterPro:IPR002509"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J8"
FT                   /protein_id="CAE40097.1"
FT                   /translation="MTMQTDRSLLTRRDFVGYGSTPPDPQWPGQARLALNIVVNYEEGS
FT                   EASFEDGDGRSELGLTEVTGSSFQGRDLAAESMFEYGSRVGIWRVLRLLRERGMTATFF
FT                   ACAQALERNPAVAQAIRAGGYDVCCHGWRWTPLQALSEAQEREEMQRAVASIERTTGQA
FT                   PAGWYCRYAPTVNTRKLVLEQGSFLYDSDSYNDELPYWVDAGDRHHLVIPYTQAHNDAK
FT                   FVRSGIATADDFFAFLRDSFDMLYAEGATQPKMMSVGLHMRLVGHPGRAAGLARFLDHV
FT                   AAHERVWVCRRLDIARHWHGLHRPAAR"
FT   misc_feature    complement(29567..29974)
FT                   /note="HMMPfam hit to PF01522, Polysaccharide deacetylase,
FT                   score 5.9e-05"
FT   CDS             complement(30190..30681)
FT                   /transl_table=11
FT                   /gene="allA"
FT                   /gene_synonym="glxA2"
FT                   /locus_tag="BPP0689"
FT                   /product="putative ureidoglycolate hydrolase"
FT                   /EC_number="3.5.3.19"
FT                   /note="Similar to Escherichia coli ureidoglycolate
FT                   hydrolase AllA or GlxA2 or B0505 SWALL:ALLA_ECOLI
FT                   (SWALL:P77731) (160 aa) fasta scores: E(): 1.5e-08, 37.17%
FT                   id in 156 aa, and to Pseudomonas aeruginosa hypothetical
FT                   protein Pa1514 SWALL:Q9I3J9 (EMBL:AE004580) (169 aa) fasta
FT                   scores: E(): 7.9e-10, 33.53% id in 167 aa"
FT                   /db_xref="GOA:Q7W1J7"
FT                   /db_xref="InterPro:IPR007247"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J7"
FT                   /protein_id="CAE40098.1"
FT                   /translation="MSSMYLSASTLSADAFSQYGEVVENRGDTAKRPLSTPFGSARQGV
FT                   TLGFTVNRLHRQPLDGIRVRTLERHPHSAQTFIPLVPSRHVVVVGLSGPDGALALPTLR
FT                   AFVTNGRQGVSYRTGVWHYAFTAIDTDSQVAVILGKTGRDDDTEYTELDQDALVVFHEE
FT                   "
FT   CDS             complement(30698..31990)
FT                   /transl_table=11
FT                   /locus_tag="BPP0690"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Agrobacterium tumefaciens putative
FT                   transmembrane protein DctM SWALL:Q9F7C8 (EMBL:AF282677)
FT                   (416 aa) fasta scores: E(): 1.1e-51, 39.33% id in 422 aa,
FT                   and to Rhizobium meliloti hypothetical protein Ra0081 or
FT                   Sma0151 SWALL:Q930W3 (EMBL:AE007202) (866 aa) fasta scores:
FT                   E(): 5.4e-45, 37.62% id in 388 aa"
FT                   /db_xref="GOA:Q7W1J6"
FT                   /db_xref="InterPro:IPR004681"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J6"
FT                   /protein_id="CAE40099.1"
FT                   /translation="MLLGALYFGGLVLFLMAGIHVASAIFMTAVVSDWMSMQVLPSMIG
FT                   NTMWSTMNKFLLVAIPLFILLGEILTRSGVADRMYKALAAWLQWLPGGLLHTNIATCAL
FT                   FAATSGSSVATSATVGTVALPTLQRLGYRERLVLGSIAAGGTLGILIPPSINMVVYGAL
FT                   AEVSVGKLFAAGIVPGIIVLLLMMAVIVIMALLGKVAPDNEKLIIPLAMRLKLLIDVLP
FT                   VVFIFGLVMGGIYLGIATPTEAAALGVVGAIAIAAANRTLSVAMLHAAFLSALRTTAMV
FT                   VLVVTTAFVLNFSLSLAGIPQALSEYIGQLGWSPTATIWVLVAFYLILGCFLEAIAMMV
FT                   TTVGVVVPLIVSLGFDPLWFGIFMTMMMELALITPPVGLNLFVAQNIRLSRGGISDVYI
FT                   GVLPFAFAMMVFVTLLIYFPQIALWLPNRLF"
FT   misc_feature    complement(join(30734..30799,30839..30904,30935..30985,
FT                   30992..31057,31088..31153,31193..31258,31274..31339,
FT                   31403..31468,31514..31579,31778..31843,31904..31969))
FT                   /note="11 probable transmembrane helices predicted for
FT                   BPP0690 by TMHMM2.0 at aa 7-29, 49-71, 137-159, 174-196,
FT                   217-239, 244-266, 279-301, 311-333, 335-352, 362-384 and
FT                   397-419"
FT   misc_feature    complement(31895..31990)
FT                   /note="Signal peptide predicted for BPP0690 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.806) with cleavage site
FT                   probability 0.350 between residues 32 and 33"
FT   CDS             complement(31990..32604)
FT                   /transl_table=11
FT                   /locus_tag="BPP0691"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Bacillus halodurans C4-dicarboxylate
FT                   transport system Bh3392 SWALL:Q9K7G9 (EMBL:AP001518) (175
FT                   aa) fasta scores: E(): 3.6e-05, 29.63% id in 162 aa, and to
FT                   Rhizobium meliloti putative permease protein Rb0286 or
FT                   Smb20296 SWALL:Q92WP3 (EMBL:AL603642) (172 aa) fasta
FT                   scores: E(): 0.081, 26.82% id in 164 aa"
FT                   /db_xref="InterPro:IPR007387"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J5"
FT                   /protein_id="CAE40100.1"
FT                   /translation="MTRLLELLCGALRAITNRACLAAGWALIALSVVIALNVLARKIFS
FT                   FSLQGVDEYGGYCLAICASIGFSQAAYDRAHIRISVLTDLLPQRLRACSDVFALALLTS
FT                   VALTLAVKATGVAYDSYSMQALATSALRTPLAIPQAMWAAALCWFGLVLATQLLHSLLL
FT                   LARRDWGGINRNYGNPSVDEEVAEELRSANERMAGKLEGAH"
FT   misc_feature    complement(join(32113..32178,32251..32316,32389..32454,
FT                   32485..32541))
FT                   /note="4 probable transmembrane helices predicted for
FT                   BPP0691 by TMHMM2.0 at aa 21-40, 50-72, 96-118 and 142-164"
FT   misc_feature    complement(32539..32604)
FT                   /note="Signal peptide predicted for BPP0691 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.882) with cleavage site
FT                   probability 0.771 between residues 22 and 23"
FT   CDS             complement(32667..33713)
FT                   /transl_table=11
FT                   /locus_tag="BPP0692"
FT                   /product="putative extracellular solute-binding protein"
FT                   /note="Similar to Rhodobacter capsulatus
FT                   c4-dicarboxylate-binding periplasmic protein precursor DctP
FT                   SWALL:DCTP_RHOCA (SWALL:P37735) (333 aa) fasta scores: E():
FT                   1.7e-05, 25.17% id in 290 aa, and to Rhizobium meliloti
FT                   hypothetical protein Ra0083 or Sma0157 SWALL:Q930W1
FT                   (EMBL:AE007202) (334 aa) fasta scores: E(): 4.1e-06, 25.94%
FT                   id in 239 aa"
FT                   /db_xref="GOA:Q7W1J4"
FT                   /db_xref="InterPro:IPR018389"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J4"
FT                   /protein_id="CAE40101.1"
FT                   /translation="MKAILQRSIALLALAAGMSSVACADEVKMRVLGWYGNQPQSQQVE
FT                   RPFWKDLPKRSNGAFSANFRTIDELGLKGFESLRTLQSGAFDVVSFQISFVGGDAPVLM
FT                   GADLPGAAFDFDQLQKNLDAYRPILEKELNDRFKAKLLTAWSFPFQILYCKGDIKTLDD
FT                   LKGKKVRVSGTYTAKMMADLNAAGATLAGPEVYQGLMQGVVDCAITGSQYGNSNDWFEV
FT                   AHSLSPIPLGGAGVVLQVARNAFWDKLSADQQAALSAEMKQLETALWDISRKGHEDGIN
FT                   CNVGKQPCTGKPGKMQLVEPTEADVREVKQLLKTSIVPMWIEDCSKFSKTCGDDWFRTI
FT                   GAAAGIAR"
FT   misc_feature    complement(32742..33620)
FT                   /note="HMMPfam hit to PF03480, Bacterial extracellular
FT                   solute-binding protein, family 7, score 2.5e-08"
FT   misc_feature    complement(33642..33713)
FT                   /note="Signal peptide predicted for BPP0692 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.796 between residues 24 and 25"
FT   misc_feature    complement(33645..33677)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             33855..34760
FT                   /transl_table=11
FT                   /locus_tag="BPP0693"
FT                   /product="putative LysR-family transcriptional regulator"
FT                   /note="Similar to Caulobacter crescentus transcriptional
FT                   regulator, LysR family Cc1621 SWALL:Q9A7U8 (EMBL:AE005837)
FT                   (298 aa) fasta scores: E(): 8.1e-23, 32.65% id in 297 aa,
FT                   and to Rhizobium meliloti putative transcriptional
FT                   regulator, LysR family protein Rb1494 or Smb20582
FT                   SWALL:Q92TL7 (EMBL:AL603647) (306 aa) fasta scores: E():
FT                   1.3e-22, 27.21% id in 294 aa"
FT                   /db_xref="GOA:Q7W1J3"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J3"
FT                   /protein_id="CAE40102.1"
FT                   /translation="MNLRLIEIFRAVMQSHTTVGAARALQISQPAVSSAIRQLESQVGF
FT                   TLFDRVGNRLSATEEAKILFRDSESIFLLSKALNHTVEELKNERLGQLRIVATPQLGHS
FT                   VLPAAINDLLKQRPKVKVFFDVRRSYNVVEIIESRAADIGFAIALEPELEQKLHMLPVA
FT                   RVQMVCLAPADHPLARRKSVTPQDISPYPLIGLELGSRLSPLVLNAFKQAGTPYRTAVE
FT                   VRYSETACLLAQAGVGVTVVDLFSAMAQARHGGGLKIIPFKPAIEVEAFAVSAKNRVPS
FT                   RLALLLVEETQKSIRRFQPA"
FT   misc_feature    33861..34040
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 3.2e-18"
FT   misc_feature    33903..33995
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    34110..34742
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 1.6e-39"
FT   CDS             34862..35248
FT                   /transl_table=11
FT                   /locus_tag="BPP0694"
FT                   /product="putative exported protein"
FT                   /note="Similar to Caulobacter crescentus hypothetical
FT                   protein Cc1215 SWALL:YC15_CAUCR (SWALL:Q9A8Y2) (153 aa)
FT                   fasta scores: E(): 3.1, 28.69% id in 115 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J2"
FT                   /protein_id="CAE40103.1"
FT                   /translation="MRLLPAMGALALLLHAPAAPAQDFDRHGHALVRDAQGWVYIDRAH
FT                   RPVLRPFIYDNGPDYYEEGLARFVEHGRMGFHDEALNIVIPAEYDFVFPFQGGKARAGM
FT                   DCRVQRHGEHGSVSCRRWTTLTRP"
FT   misc_feature    34862..34924
FT                   /note="Signal peptide predicted for BPP0694 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.807) with cleavage site
FT                   probability 0.797 between residues 21 and 22"
FT   CDS             complement(35245..35928)
FT                   /transl_table=11
FT                   /locus_tag="BPP0695"
FT                   /product="putative GntR-family transcriptional regulator"
FT                   /note="Similar to Brucella melitensis transcriptional
FT                   regulator, GntR family Bmeii0281 SWALL:Q8YD96
FT                   (EMBL:AE009666) (238 aa) fasta scores: E(): 3.9e-13, 33.64%
FT                   id in 214 aa, and to Rhizobium loti transcriptional
FT                   regulator Mll6988 SWALL:Q987M8 (EMBL:AP003010) (220 aa)
FT                   fasta scores: E(): 4.2e-13, 31.96% id in 219 aa"
FT                   /db_xref="GOA:Q7W1J1"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J1"
FT                   /protein_id="CAE40104.1"
FT                   /translation="MSARSAPKSQTRSSTEISEEILRRIQSGRYLPGNSLSQYELASEF
FT                   GTSRTPIREALRFLEARRAISLTDTGRAMVAIPSVRAIREAFEVRAELEGLAARLAVDW
FT                   IEDKHLKLLAQHQKHYASTLRSRVRNERGSEWLQHNFDFHHLITELSHNERLLDMVSEL
FT                   QSSSVSDVLGFASKMPPRLMEENIQQHEAIIAALTRRDGAAAREAMIEHVLRTMRLVID
FT                   WMESR"
FT   misc_feature    complement(35704..35880)
FT                   /note="HMMPfam hit to PF00392, Bacterial regulatory
FT                   proteins, gntR family, score 2.9e-09"
FT   CDS             36200..36685
FT                   /transl_table=11
FT                   /locus_tag="BPP0696"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Clostridium acetobutylicum possible
FT                   pectin degradation protein Cac3376 SWALL:Q97DU5
FT                   (EMBL:AE007834) (114 aa) fasta scores: E(): 0.66, 37.87% id
FT                   in 66 aa, and to Thermoplasma volcanium hypothetical
FT                   protein Tv0214 or Tvg0221806 SWALL:Q97C89 (EMBL:AP000991)
FT                   (121 aa) fasta scores: E(): 1.5, 25.37% id in 67 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1J0"
FT                   /protein_id="CAE40105.1"
FT                   /translation="MSDIDPITSARILNPGGRGGPLTEAHQPMRAMHRDDIEWENLRYE
FT                   GQFSKMMFHPVQDDRTIPNAGIVRYEKGSGHPLHNHYFAQIWYVLSGKFEIEGKVYGEG
FT                   SMMFHPDPHYEYALNTLEDGEILYVQYMGPTTRQPAIYEGRFNMETRRPLEDESTAA"
FT   CDS             36785..37309
FT                   /transl_table=11
FT                   /locus_tag="BPP0697"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Anabaena sp. hypothetical protein Alr3026
FT                   SWALL:Q8YSQ8 (EMBL:AP003591) (184 aa) fasta scores: E():
FT                   9e-13, 31.97% id in 172 aa, and to Brucella melitensis
FT                   tripartite transporter, small subunit Bmei1581 SWALL:Q8YFE1
FT                   (EMBL:AE009593) (182 aa) fasta scores: E(): 1.7e-10, 32.09%
FT                   id in 162 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I9"
FT                   /protein_id="CAE40106.1"
FT                   /translation="MERLIQVLDLFSDRMGRLASMVMLPVLLVTFAVVVLRYVFGIGLI
FT                   WLQDSYVWLTSVFFICMAGNTFLHDRHVRVELFYSRMTARKRALVNALGVLLLLWPTLF
FT                   VTVQQSWRPIARSWRFLEALPNAGGLSFAYVHKSLVYVFCLVLFLQGLSLLLKSARTLA
FT                   GARGVAPEASP"
FT   misc_feature    join(36857..36925,36935..36988,37049..37117,37199..37252)
FT                   /note="4 probable transmembrane helices predicted for
FT                   BPP0697 by TMHMM2.0 at aa 5-27, 31-48, 69-91 and 119-136"
FT   CDS             37306..38661
FT                   /transl_table=11
FT                   /locus_tag="BPP0698"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Synechocystis sp. hypothetical protein
FT                   Sll1103 SWALL:P74224 (EMBL:D90913) (445 aa) fasta scores:
FT                   E(): 6.8e-66, 44.98% id in 449 aa, and to Anabaena sp.
FT                   hypothetical protein Alr3027 SWALL:Q8YSQ7 (EMBL:AP003591)
FT                   (445 aa) fasta scores: E(): 2.2e-61, 45.84% id in 445 aa"
FT                   /db_xref="GOA:Q7W1I8"
FT                   /db_xref="InterPro:IPR004681"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I8"
FT                   /protein_id="CAE40107.1"
FT                   /translation="MSLSDVLCLLMFATVMGTMMFGFPVAFTLSGVGVAFALLGSALDV
FT                   FEWRTMGGVMGRLYGIMSNEMLVAIPLFVFMGIMLEKSKAAERLLVTTSSLFGSLSGGL
FT                   AFTVVMVGTLLSAATGMVAATVATLALISVPAMRRAGYQPSYMAGSICASGTLSQLIPP
FT                   STVLILIGDMLRGVTPPDRPGGPVTVSDLFAGVVLPSVLLVVLFLGYVLYRALLRPDTC
FT                   PPLPRSAGQRVGLRQLLVDAVAPLALIIAVLGSILAGIATPTESAAVGAMGAVLIALLY
FT                   KALSWPVLKQVCMATGHLVAMVFTIMIGAAIFSLVFKGLGGEHLARELLSSVPGDLYGA
FT                   LLLVLLIAFVLGFFLDSFEIIFVVIPIFGPPLLSLGVDPLLFGVLLAVTLQTSYLTPPF
FT                   GFAIFYLQGVYKDIGAETAYRGVLPYIALQVGAVAALLSFPALATWLPTVLY"
FT   misc_feature    37306..37416
FT                   /note="Signal peptide predicted for BPP0698 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.797 between residues 37 and 38"
FT   misc_feature    join(37366..37434,37477..37545,37570..37638,37648..37716,
FT                   37750..37818,37876..37944,38020..38088,38101..38169,
FT                   38188..38256,38314..38370,38383..38451,38464..38532,
FT                   38566..38634)
FT                   /note="13 probable transmembrane helices predicted for
FT                   BPP0698 by TMHMM2.0 at aa 21-43, 58-80, 89-111, 115-137,
FT                   149-171, 191-213, 239-261, 266-288, 295-317, 337-355,
FT                   360-382, 387-409 and 421-443"
FT   CDS             38702..39826
FT                   /transl_table=11
FT                   /locus_tag="BPP0699"
FT                   /product="extracellular solute-binding protein"
FT                   /note="Similar to Anabaena sp. extracellular solute-binding
FT                   protein All3028 SWALL:Q8YSQ6 (EMBL:AP003591) (364 aa) fasta
FT                   scores: E(): 3.4e-44, 37.32% id in 359 aa, and to
FT                   Synechocystis sp. hypothetical protein Slr1962 SWALL:P74100
FT                   (EMBL:D90912) (370 aa) fasta scores: E(): 1.1e-40, 35.44%
FT                   id in 364 aa"
FT                   /db_xref="GOA:Q7W1I7"
FT                   /db_xref="InterPro:IPR018389"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I7"
FT                   /protein_id="CAE40108.1"
FT                   /translation="MNPNSDNKRRTLLRAATVGGLGAVLAGAAPPALAKPRVRWRMGMA
FT                   WTRSAPGYTTPVVALADFLDKATGGAFQIEVFGAGDLVPAMQTFDAVLDGTLDCGHGYA
FT                   SYWSGKSIAMNLVMSMPFGTTAQEKNAWLQYGGGQALADKVYERLGAKFFPLGNCGVQP
FT                   MGWFRKEINSIDDFKGLKFRVSGLPGEVLRECGVAVVGMPLGEVLQAMQSGAVDACELT
FT                   GPYIDTTLGIQRIAKNYYFPGWHEPEGQFDLFINLDAWNKLSPEYKELVRVGAYYANGV
FT                   MLNELVAKNGKAFEDLRTEHGVTARLLPDDVLKRMHEITNDLLAGAYERDPLARELRDS
FT                   LRAFLGAAAPYSEYSELLFMQARANLSGRPRLGG"
FT   misc_feature    38702..38803
FT                   /note="Signal peptide predicted for BPP0699 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.952 between residues 34 and 35"
FT   misc_feature    38825..39694
FT                   /note="HMMPfam hit to PF03480, Bacterial extracellular
FT                   solute-binding protein, family 7, score 9e-53"
FT   misc_feature    39011..39034
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             join(39875..40840,40842..41372)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0700"
FT                   /product="probable GntR-family transcriptional regulator
FT                   (Pseudogene)"
FT                   /note="Similar to Pseudomonas aeruginosa probable
FT                   transcriptional regulator Pa4165 SWALL:Q9HWL6
FT                   (EMBL:AE004833) (496 aa) fasta scores: E(): 3.9e-94, 54.63%
FT                   id in 496 aa, and to Salmonella typhi putative GntR-family
FT                   regulatory protein Sty3762 SWALL:Q8Z301 (EMBL:AL627279)
FT                   (493 aa) fasta scores: E(): 6.3e-86, 48.36% id in 490 aa"
FT                   /db_xref="PSEUDO:CAE40109.1"
FT   misc_feature    39968..40147
FT                   /note="HMMPfam hit to PF00392, Bacterial regulatory
FT                   proteins, gntR family, score 8.6e-14"
FT   misc_feature    41304..41324
FT                   /note="PS00290 Immunoglobulins and major histocompatibility
FT                   complex proteins signature."
FT   CDS             complement(41387..42679)
FT                   /transl_table=11
FT                   /gene="glyA"
FT                   /locus_tag="BPP0701"
FT                   /product="serine hydroxymethyltransferase"
FT                   /EC_number="2.1.2.1"
FT                   /note="Similar to Rhizobium loti serine
FT                   hydroxymethyltransferase 1 GlyA1 or Mlr8400
FT                   SWALL:GLA1_RHILO (SWALL:Q983B6) (437 aa) fasta scores: E():
FT                   1.1e-98, 63.78% id in 417 aa, and to Hyphomicrobium
FT                   methylovorum serine hydroxymethyltransferase GlyA
FT                   SWALL:GLYA_HYPME (SWALL:P34895) (434 aa) fasta scores: E():
FT                   4.3e-98, 62.61% id in 428 aa"
FT                   /db_xref="GOA:Q7W1I6"
FT                   /db_xref="InterPro:IPR019798"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1I6"
FT                   /protein_id="CAE40110.1"
FT                   /translation="MNDLLPAAAAPAGARALPLRHADPEIWRAVDAERQRQMHSIELIA
FT                   SENFVSQAVLDAQGSVMTNKYAEGYPGRRYYGGCRHVDVAERAAIERARRLFGCEYANV
FT                   QPHSGSQANQAVYLALLAPGDRILGLDLKAGGHLTHGARVNLSGKWFEALSYGVDPVSH
FT                   RIDMDEVERTARRERPRLIIAGGSAYARVPDFARFRAIADATGALFVADMAHYAGLVAG
FT                   GAFPSPVPFAHVTTTTTHKTLRGPRGGMILTDDADIARRIDAAVFPGLQGGPLMHVIAA
FT                   KAVALGEALQPGFRAYARAVIDNARALCARLAEGGLSIVSGGTDCHLGVVDLRPWGLAG
FT                   NAAERALEEAGITVNKNAVPGDAASPAVTSGIRVGSAACTSRGMGPAEFRQIGDLVLAV
FT                   LGGLRDGGQAGGRDAVPARAAELSRRFPLPY"
FT   misc_feature    complement(41492..42625)
FT                   /note="HMMPfam hit to PF00464, Serine
FT                   hydroxymethyltransferase, score 1.7e-240"
FT   misc_feature    complement(41933..41983)
FT                   /note="PS00096 Serine hydroxymethyltransferase
FT                   pyridoxal-phosphate attachment site."
FT   misc_feature    complement(42221..42259)
FT                   /note="PS00213 Lipocalin signature."
FT   CDS             complement(42676..43911)
FT                   /transl_table=11
FT                   /gene="benE"
FT                   /locus_tag="BPP0702"
FT                   /product="benzoate membrane transport protein"
FT                   /note="Similar to Acinetobacter calcoaceticus benzoate
FT                   membrane transport protein BenE SWALL:BENE_ACICA
FT                   (SWALL:P07775) (394 aa) fasta scores: E(): 7e-57, 41.55% id
FT                   in 385 aa, and to Pseudomonas putida BenE SWALL:Q9L7Y0
FT                   (EMBL:AF218267) (399 aa) fasta scores: E(): 8.5e-65, 47.1%
FT                   id in 380 aa"
FT                   /db_xref="GOA:Q7W1I5"
FT                   /db_xref="InterPro:IPR004711"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I5"
FT                   /protein_id="CAE40111.1"
FT                   /translation="MHTPTAVLRPADFLAPIVAALISVLVNYGGTFVLVFQAAELAGLS
FT                   AAQTTSWVWAVSIGVGVTGIALSWRYREPIITAWSTPGVAFLATVMPFTPYGEVIGAYL
FT                   AAALGFVVLGLSGAFEKLVRMIPAGIAAGLLAGILLQFGINAFGGASADPLLVIALLVS
FT                   YALLKRYTSRFAVVGILVIGLGLLAAQQRVDFAALHLSLAAPVFEMPRFSLHAMLGVAL
FT                   PLFVITLTGQYMPGMLVLRNDGFKTSANPILVATGLGSLVMAPFGAHTFNVAAITAAIC
FT                   TGRDAHEDPRKRYIAGLACGVFYILVGLFGVTLATLFMVLPKTFITTLAGLALLGTIGG
FT                   SLASAMADARTRETALITFLATAANVTLLGVGGAFWGLVAGLAAHGLIHFRQPEPAAAR
FT                   PALLSPTSQDTR"
FT   misc_feature    complement(42751..43881)
FT                   /note="HMMPfam hit to PF03594, Benzoate membrane transport
FT                   protein, score 3.5e-165"
FT   misc_feature    complement(join(42778..42843,42883..42939,42955..43020,
FT                   43084..43149,43210..43275,43345..43401,43468..43533,
FT                   43555..43611,43627..43683,43705..43761,43807..43872))
FT                   /note="11 probable transmembrane helices predicted for
FT                   BPP0702 by TMHMM2.0 at aa 13-35, 50-69, 76-95, 100-119,
FT                   126-148, 170-189, 212-234, 254-276, 297-319, 324-343 and
FT                   356-378"
FT   CDS             44150..44614
FT                   /transl_table=11
FT                   /locus_tag="BPP0703"
FT                   /product="probable oxidoreductase"
FT                   /note="Similar to Pseudomonas aeruginosa probable
FT                   oxidoreductase Pa2379 SWALL:Q9I1A0 (EMBL:AE004664) (156 aa)
FT                   fasta scores: E(): 3.2e-39, 65.33% id in 150 aa, and to
FT                   Ralstonia solanacearum probable aldehyde dehydrogenase
FT                   Rsc0626 or Rs01528 SWALL:Q8Y1R3 (EMBL:AL646060) (152 aa)
FT                   fasta scores: E(): 1.6e-38, 68.24% id in 148 aa"
FT                   /db_xref="GOA:Q7W1I4"
FT                   /db_xref="HSSP:1VLB"
FT                   /db_xref="InterPro:IPR001041"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I4"
FT                   /protein_id="CAE40112.1"
FT                   /translation="MATLTINGKSQDVDAPDDMPLLWVIRDRLGMTGTKFGCGMALCGA
FT                   CTVHLDGQPVRSCITPVAAAAGKRIVTIEAVGEDEVGRAVQQAWTEIGVPQCGYCQSGQ
FT                   IMSATALIKSNPKPSDEDIDAAMSGNICRCGTYPRIRAAIKQVAVKGVAK"
FT   misc_feature    44159..44341
FT                   /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster
FT                   binding domain, score 2.7e-08"
FT   misc_feature    44261..44287
FT                   /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding
FT                   region signature."
FT   misc_feature    44363..44587
FT                   /note="HMMPfam hit to PF01799, [2Fe-2S] binding domain,
FT                   score 6.7e-31"
FT   CDS             44611..46962
FT                   /transl_table=11
FT                   /locus_tag="BPP0704"
FT                   /product="putative aldehyde dehydrogenase"
FT                   /note="Similar to Pseudomonas aeruginosa probable aldehyde
FT                   dehydrogenase Pa2378 SWALL:Q9I1A1 (EMBL:AE004664) (771 aa)
FT                   fasta scores: E(): 6.7e-179, 60.91% id in 765 aa, and to
FT                   Caulobacter crescentus isoquinoline 1-oxidoreductase, beta
FT                   subunit Cc2269 SWALL:Q9A626 (EMBL:AE005897) (724 aa) fasta
FT                   scores: E(): 1.6e-57, 39.34% id in 760 aa"
FT                   /db_xref="GOA:Q7W1I3"
FT                   /db_xref="InterPro:IPR008274"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I3"
FT                   /protein_id="CAE40113.1"
FT                   /translation="MNAFDRFAPSHAALADEPCGLAPASPARREWLRTAAALTGLVLVV
FT                   GAGGVVRAAGEAAKEAKKYGGDGMPHGTVDDPLVFVSIAADGLVTIVAHRAEMGTGVRT
FT                   SLPMVVADELEADWNRVRVIQAPGDEPRYGNQDTDGSRSTRHFFLPMRRVGAAARAMLE
FT                   AAAARQWGVPVAEVAARQHEVVHEKSGRKLGYGELATAAAALPVPAEAALRLQQPAQFR
FT                   YIGKPGARSVDIEDIVTGKTHFGIDTRLDGMLYASVARPAVLGGKVKAYKAEAALKVPG
FT                   VVKVVELPAGPTPPVFAPLGGVAVIASDTWAALKGRQALEIEWDDGPHASYDSEAFRKT
FT                   LSEGAGKPAKPVRNDGDAMQALAGAARRIEAEYYLPHLAHATMEPPAATARLADGKCEV
FT                   WACVQSPYGTRENVARHLGLDIGAVTVHQTLLGGGFGRKSKSDFVVEAALLSKAMDGKP
FT                   VKVTWSREDDLANDYFHTVSVERLEAGVDAQGKAVAWLHRTAAPTIGSTFAAGAEGQQP
FT                   FELGMSAINIPFDIPNFRVESVPVPAHTRIGWFRSVSNIPHAFAVQSFVAEMAHALGRD
FT                   PRDYLLELIGPPRRIAPAAMSDGWNYGESPELYPLDTGRMRHVIEVATGAAGWGRKLAA
FT                   GRGLGVAVSYSFVTYIATVVEVEVGQDGAIAVPRVHVAVDCGPQVHPDRVRAQVEGACI
FT                   MGLSLATRSEISFAQGRATQTNFHQYEVARMPEAPREIVVHLVEHGFDVPLGGVGEPAV
FT                   PPFAPALCNAIFAATGKRIRALPIRDQLKA"
FT   misc_feature    45325..45600
FT                   /note="HMMPfam hit to PF01315, Aldehyde oxidase and
FT                   xanthine dehydrogenase, a/b hammerhead domain, score 0.03"
FT   misc_feature    45604..46797
FT                   /note="HMMPfam hit to PF02738, Aldehyde oxidase and
FT                   xanthine dehydrogenase, molybdopterin binding domain, score
FT                   3.3e-07"
FT   CDS             47031..47981
FT                   /transl_table=11
FT                   /locus_tag="BPP0705"
FT                   /product="putative LysR-family transcriptional regulator"
FT                   /note="Similar to Rhizobium meliloti putative
FT                   transcriptional regulator protein Rb0123 or Smb20123
FT                   SWALL:Q92X39 (EMBL:AL603642) (298 aa) fasta scores: E():
FT                   6e-28, 34.84% id in 287 aa, and to Agrobacterium
FT                   tumefaciens transcriptional regulator, LysR family Atu4264
FT                   or Agr_l_1195 SWALL:AAK89175 (EMBL:AE009355) (298 aa) fasta
FT                   scores: E(): 1.5e-22, 30.71% id in 293 aa"
FT                   /db_xref="GOA:Q7W1I2"
FT                   /db_xref="HSSP:1IXC"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I2"
FT                   /protein_id="CAE40114.1"
FT                   /translation="MPSPSRSPATAYKKAPSLKGLPSIRQLRAFVAVYYTGTLSAAAEA
FT                   LSLTQPAVTILLKELEEKLGVRLFDRTTRALRRTTAALEAIAYAERVLGELDALSASMT
FT                   DLADVRRGRLRVAATSTVAQTLLPKVVRRFLDLHPGVKLSVDDCAPAMFAEHVLSEQVD
FT                   LGVGTLESAVPGLEQHQFLGDHLCAVATDAAFGHGRPMTWKQLSGLPVIVVQAGYGVRR
FT                   SIERAAQQAGVELQVAFEVSLLTTALAMAASGLGVAVVPQSILAHTHYTNLVARRLVRP
FT                   VVLRSTSVVFKEARALSPSAQAFAELLRREFSSPA"
FT   misc_feature    47100..47279
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 5e-19"
FT   misc_feature    47142..47234
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    47349..47969
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 6.8e-45"
FT   CDS             complement(47978..48688)
FT                   /transl_table=11
FT                   /locus_tag="BPP0706"
FT                   /product="putative transcriptional regulator"
FT                   /note="Similar to Streptomyces coelicolor putative
FT                   transcriptional regulator Sco6246 or Scah10.11C
FT                   SWALL:Q9RKU6 (EMBL:AL132824) (270 aa) fasta scores: E():
FT                   4.6e-09, 30.56% id in 265 aa, and to Pseudomonas aeruginosa
FT                   probable transcriptional regulator Pa3508 SWALL:Q9HYA1
FT                   (EMBL:AE004771) (277 aa) fasta scores: E(): 4.7e-09, 32.28%
FT                   id in 223 aa"
FT                   /db_xref="GOA:Q7W1I1"
FT                   /db_xref="InterPro:IPR005471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I1"
FT                   /protein_id="CAE40115.1"
FT                   /translation="MPRYPVRPADHAQSAEGGVTAVDRALTLLTAFRVTDQTLSLSELS
FT                   ERASLVPSTVLRLLASLMHFGFVLRRPDGRYALGPAAARLNRVYAASFNLQDVVLPALQ
FT                   ELVGQTRESASFHVRQGAHRLVLYRVSSPQPLSDQSHTGDLLPLDRGTGGHVLMAFSDT
FT                   PGEFYEALRLRGYMASPVSDRSPELAGISAPVFDAQGMLAGALTLTMPVHRYKDAHIPV
FT                   LREAAARLSAALGA"
FT   misc_feature    complement(47990..48463)
FT                   /note="HMMPfam hit to PF01614, Bacterial transcriptional
FT                   regulator, score 4.8e-09"
FT   CDS             48781..51174
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0707"
FT                   /product="hypothetical protein (pseudogene)"
FT                   /note="Due to a large deletion event, this CDS is the
FT                   result of a fusion of two separate CDSs. The N-terminal
FT                   region is similar to Pseudomonas mevalonii
FT                   hydroxymethylglutaryl-coa lyase mvaB SWALL:HMGL_PSEMV
FT                   (SWALL:P13703) (301 aa) fasta scores: E(): 2.3e-32, 38.98%
FT                   id in 277 aa. The C-terminal region is similar to
FT                   Salmonella enterica subsp. enterica serovar Typhimurium
FT                   VrgS protein SWALL:Q93IR3 (EMBL:AJ320483) (729 aa) fasta
FT                   scores: E(): 3.2e-37, 41.97% id in 355 aa."
FT                   /db_xref="PSEUDO:CAE40116.1"
FT   misc_feature    48814..49662
FT                   /note="HMMPfam hit to PF00682, HMGL-like, score 9.7e-42"
FT   CDS             51191..51604
FT                   /transl_table=11
FT                   /locus_tag="BPP0708"
FT                   /product="putative exported protein"
FT                   /note="Similar to Brucella melitensis hypothetical protein
FT                   Bmeii1079 SWALL:Q8YB22 (EMBL:AE009740) (164 aa) fasta
FT                   scores: E(): 2.8, 27.11% id in 118 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1I0"
FT                   /protein_id="CAE40117.1"
FT                   /translation="MGSTAWWIAGTLATLAAVGLVALLVRGGARPYEAERALAAQLART
FT                   GRPAQAEVLALDRQPGGELYAAPMKLALRYADAMGRARQAELHVYIDSELLVNFMPGQA
FT                   IHVRLDPSDAARIAVDRERSPTEIPAAWRRRHP"
FT   misc_feature    51191..51271
FT                   /note="Signal peptide predicted for BPP0708 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.732) with cleavage site
FT                   probability 0.195 between residues 27 and 28"
FT   misc_feature    51203..51271
FT                   /note="1 probable transmembrane helix predicted for BPP0708
FT                   by TMHMM2.0 at aa 5-27"
FT   CDS             51601..54150
FT                   /transl_table=11
FT                   /locus_tag="BPP0709"
FT                   /product="putative exported protein"
FT                   /note="The C-terminal reggion of this CDS is similar to
FT                   Caulobacter crescentus pentapeptide repeat family protein
FT                   Cc0587 SWALL:Q9AAL0 (EMBL:AE005733) (371 aa) fasta scores:
FT                   E(): 2.9e-09, 33.76% id in 311 aa, and to Methanosarcina
FT                   acetivorans hypothetical protein Ma2354 SWALL:AAM05743
FT                   (EMBL:AE010924) (337 aa) fasta scores: E(): 1.8e-09, 26.31%
FT                   id in 323 aa"
FT                   /db_xref="InterPro:IPR018683"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H9"
FT                   /protein_id="CAE40118.1"
FT                   /translation="MKIVKPLRLGLLSRPYRMRGRQRLGLAVFALATLDEQALLQPEAD
FT                   LWSLAGEALGEDGVLDLAVPKPCAEFLVSGAAYTAHQQDRTACMARVRVGELEKTLAVF
FT                   GERYWLDGKPTPPAPFEAMPLDWAHAFGGPEYADNPHGRGAGDERIAGVRTRRLPNVEP
FT                   ARGRMQRPDQRPEPAGFGPVSPLWPRRFARAGQYHESWLDDGFPGFLDTLDPHFFNAAA
FT                   PDQWWPGQPELAAGAPYALWNLHPRLACQQGALPRWRARCLLRRAGETALEDVALRLTT
FT                   AWFFPDRERLLLIYHGATDIAQDDGADIELAMPALDAADAPRPLAHYEAVLAQRLDAQD
FT                   GALHALRDKDLLPAQALGPWDALQAANPMEQPFAVNQRARGAAIRAQLGEQARAHGVDP
FT                   RAYEPQPAPMPAAPQLDDLPDIARHMRQAAQEARIDALHARRRMAEALQARGAELPPAM
FT                   GAAALAAAADGAGRGGPPSLHNHPALATLQELARAQPLGSDADRLDAGSVGARLREAQQ
FT                   QLGRLYLHAAHHQPPAEAARPARAARLRRRVQALMAGSRDLAGLDLTGADLSGLDLRGA
FT                   RCVGTWMEGVDLSGALLDDADLSQAVLARAHAEGGSWRRAVLAGANLGQAALDGVDLAG
FT                   ARLSSPVLDGIVLVDCALSASRWNDCHLAGAWLERCRFDQAELDTVTFWQGTLLRETGF
FT                   AAARLARVTWLDCELDGLDFAGARLRRCAWVQSQCGAAPNWAGAELQTCCVVETDMPHA
FT                   VFAGATLRECSLRDTVLDHADFTGAALWRCDLSQASLAEADLPGALLQKATLTHADLRG
FT                   ANLFRADLGLAVLDDTSDTRGAYTHLANTRPRARHGR"
FT   misc_feature    51601..51714
FT                   /note="Signal peptide predicted for BPP0709 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.690) with cleavage site
FT                   probability 0.455 between residues 38 and 39"
FT   misc_feature    53248..53370
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 2.1e-05"
FT   misc_feature    53386..53505
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 0.0021"
FT   misc_feature    53506..53625
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 0.43"
FT   misc_feature    53659..53778
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 1.5"
FT   misc_feature    53842..53961
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 9.4e-05"
FT   misc_feature    53962..54081
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 1.1e-06"
FT   CDS             join(54140..54979,54978..55199)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0710"
FT                   /product="conserved hypothetical protein (Pseudogene)"
FT                   /note="Similar to Caulobacter crescentus pentapeptide
FT                   repeat family protein Cc0587 SWALL:Q9AAL0 (EMBL:AE005733)
FT                   (371 aa) fasta scores: E(): 1.5e-15, 33.13% id in 338 aa,
FT                   and to Synechocystis sp. hypothetical protein Slr1819
FT                   SWALL:YI19_SYNY3 (SWALL:P73709) (331 aa) fasta scores: E():
FT                   6e-15, 28.17% id in 323 aa"
FT                   /db_xref="PSEUDO:CAE40119.1"
FT   misc_feature    54209..54328
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 1e-05"
FT   misc_feature    54404..54523
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 0.67"
FT   misc_feature    54554..54673
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 0.00075"
FT   misc_feature    54704..54823
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 0.0039"
FT   misc_feature    54854..54973
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 4.8e-06"
FT   variation       54972..54979
FT                   /note="(GC)4 in parapertussis; (GC)5 in bronchiseptica"
FT   misc_feature    join(54986..54994,54996..55106)
FT                   /note="HMMPfam hit to PF00805, Pentapeptide repeats (8
FT                   copies), score 0.24"
FT   CDS             55230..56135
FT                   /transl_table=11
FT                   /locus_tag="BPP0711"
FT                   /product="hypothetical protein"
FT                   /note="The C-terminal region of this CDS is similar to the
FT                   C-terminal regions of Bacillus subtilis hypothetical
FT                   protein YqcG SWALL:YQCG_BACSU (SWALL:P45942) (531 aa) fasta
FT                   scores: E(): 1.4e-15, 54.81% id in 135 aa, and to that of
FT                   Clostridium acetobutylicum uncharacterized protein, YqcG
FT                   b.subtilis homolog, Cf-7 family Cac1640 SWALL:Q97IK0
FT                   (EMBL:AE007673) (377 aa) fasta scores: E(): 0.0018, 31.2%
FT                   id in 125 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H8"
FT                   /protein_id="CAE40120.1"
FT                   /translation="MFADCQLMGMDLAFPDICKTPPALLPIPYPNFALGPMGIPNVWNV
FT                   LLMAMPAHNLLTTIALSNGDNPGIGMGLISQTVMAQARRITCVPNVLFGCIPATRLTGV
FT                   TVQNTINTVGMRVVPSQLKVVLLGGGGGGGAAKAAKSAKAGKGPGARAGATARRGAGGK
FT                   GGAAGKGGQGGGKAAGSGKSGGGKGAKPRKPGDDPRYRRGKFRKGVRDKAWDQEARRSK
FT                   DGVVRDPVSGKKMKKDEPWDMGHKPGYEHRKHVRSAKERDIDRKQFLDEYNDPSHYRPE
FT                   LPKSNRGHQGELKTDDYFGP"
FT   CDS             56176..56736
FT                   /transl_table=11
FT                   /locus_tag="BPP0712"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Bacillus subtilis hypothetical protein
FT                   YqcF SWALL:YQCF_BACSU (SWALL:P45941) (192 aa) fasta scores:
FT                   E(): 2.3e-18, 36.02% id in 186 aa, and to Ralstonia
FT                   solanacearum hypothetical protein Rsp1132 or Rs05507
FT                   SWALL:Q8XQT6 (EMBL:AL646083) (192 aa) fasta scores: E():
FT                   8.8e-17, 36.02% id in 186 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H7"
FT                   /protein_id="CAE40121.1"
FT                   /translation="MARHALKVFGGTPVVHAYRHDQIDTLSIDMLAVDDSPDDGLVSYS
FT                   TLGLFDLELRHDDGHPMATRVELCAEMPEDLQSWANVLATAAFGLMRSGQAVMPGSVLP
FT                   DCVAEYYPDATVPHLYLCVPFSWQDGEFPRCDADGLLVNWLQAVPISETERQFIETAGP
FT                   DAFEDELLEADPDIYDLSRPAVR"
FT   CDS             57309..58358
FT                   /transl_table=11
FT                   /locus_tag="BPP0713"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0082 SWALL:Q9I750 (EMBL:AE004447) (344 aa) fasta
FT                   scores: E(): 1.4e-26, 35.89% id in 351 aa, and to
FT                   Salmonella typhimurium and Salmonella enterica subsp.
FT                   enterica serovar Typhimurium putative cytoplasmic protein
FT                   Stm0266 or SciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta
FT                   scores: E(): 3.1e-14, 32.21% id in 357 aa"
FT                   /db_xref="InterPro:IPR010657"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H6"
FT                   /protein_id="CAE40122.1"
FT                   /translation="MPRMTTNMEFADLLKTLTPSLPCGEDLEYDADFLQLQQAAVGRSE
FT                   QQFGATIIPAQAPDWRAVERLALGLLERTRDLRIIAYLTRAWTEMRGLPGYAEGVTLAA
FT                   GTLEQYWDAVHPMLASGGEEDPMPRVNALASLGDPQGCVRGMRSACLLDDVHGRLSLRD
FT                   AEALLDGGRSEADYPGGRTRLIENLRQARLRRDDAALAVGAAAGALRRIQQQATQRLGS
FT                   AWCPDYAQALRALDALLRTWSDLDETAAAPAAAMPAEAHHAAPAPEPQPAPASWHDARI
FT                   ATREDAMAMLAKVSAYFETHEPSHPAPYLIRRVQQLIPLDFHDILRNLAPQGLAQFEAW
FT                   TAREAASQS"
FT   CDS             58401..58964
FT                   /transl_table=11
FT                   /locus_tag="BPP0714"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0083 SWALL:Q9I749 (EMBL:AE004447) (172 aa) fasta
FT                   scores: E(): 4.2e-42, 72.12% id in 165 aa, and to
FT                   Salmonella typhimurium and Salmonella enterica subsp.
FT                   enterica serovar Typhimurium putative cytoplasmic protein
FT                   Stm0273 or SciH SWALL:Q93IS8 (EMBL:AE008707) (180 aa) fasta
FT                   scores: E(): 1.2e-40, 68.53% id in 178 aa"
FT                   /db_xref="InterPro:IPR008312"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H5"
FT                   /protein_id="CAE40123.1"
FT                   /translation="MATTLKGSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVL
FT                   ADLAGKSNTPQPEVGERKFLDVDIDNFDERMKSVAPRAAFQVANTLTGAGHLNVDITFE
FT                   SIDDFSPATVARKVGALNEMLEARTQLANLLTYMDGKTGAEELIGQVLQNPALLGALAA
FT                   APKPADAGPADADAESAQPGPQAR"
FT   CDS             58986..60488
FT                   /transl_table=11
FT                   /locus_tag="BPP0715"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Yersinia pestis hypothetical protein
FT                   Ypo2938 SWALL:Q8ZCP0 (EMBL:AJ414154) (500 aa) fasta scores:
FT                   E(): 1.7e-158, 74.03% id in 493 aa, and to Salmonella
FT                   enterica subsp. enterica serovar Typhimurium SciI protein
FT                   SWALL:Q93IS7 (EMBL:AJ320483) (497 aa) fasta scores: E():
FT                   7.9e-156, 73.62% id in 489 aa"
FT                   /db_xref="InterPro:IPR002345"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H4"
FT                   /protein_id="CAE40124.1"
FT                   /translation="MTAVARRERAQAESSLAADDLSALLKKEFKPKTEQAREAVEHAVR
FT                   TLAHQALENSGLGLSSDAYRTIQAIIAEIDRKLSEQINLVMHHPDFQQLEGAWRGLHYL
FT                   VTNTETDELLKIRFMCLSKNELGRTLKRYKGVGWDQSPIFKRVYEEEYGQFGGEPIGCL
FT                   VGDYSFDHSPPDVELLGEIARISAAAHCPFIAGASPNVMQMDSWQELSNPRDLTKIFTN
FT                   TEYVAWRSLRELEDARYVGLAMPRFLARLPYGARTNPVDEFDFEEETDGANHDRYTWAN
FT                   SAYAMAANINRSFKLYGWCTSIRGVESGGAVENLPCHTFPTDDGGVDMKCPTEIAISDR
FT                   REAELAKNGFMPLVHRKNSDFAAFIGAQSLQRPQEYHDADASANAKLAARLPYLFACCR
FT                   FAHYLKCIVRDKIGSFRERSDMERWLNDWIMNYVDGDPANSSQETKARKPLAAAEVQVT
FT                   EIEDNPGYYAAKFFLRPHYQLEGLTVSLRLVSKLPSLKQNEG"
FT   misc_feature    59253..59288
FT                   /note="PS00213 Lipocalin signature."
FT   CDS             60546..61031
FT                   /transl_table=11
FT                   /locus_tag="BPP0716"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0085 SWALL:Q9I747 (EMBL:AE004447) (162 aa) fasta
FT                   scores: E(): 6.5e-21, 42.13% id in 159 aa, and to
FT                   Salmonella typhimurium and Salmonella enterica subsp.
FT                   enterica serovar Typhimurium putative cytoplasmic protein
FT                   Stm0279 or SciM SWALL:Q93IS3 (EMBL:AE008707) (161 aa) fasta
FT                   scores: E(): 4.1e-18, 36.64% id in 161 aa"
FT                   /db_xref="InterPro:IPR008514"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H3"
FT                   /protein_id="CAE40125.1"
FT                   /translation="MAVDMFMKIEGANGESKDANHKDWTDIVSFSWGATQPASLATGGG
FT                   QGVGKASFNDLHVVARIDKAAPAVMKHCASGKHLGKIELSVCKAGGAQVEYSKVTLEDV
FT                   LVTSVQIAADNGSEAVLVNYAFQAAKVRQQYWEQTESGGKGAESLVAWDIKQNKEIG"
FT   CDS             61081..61890
FT                   /transl_table=11
FT                   /locus_tag="BPP0717"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0086 SWALL:Q9I746 (EMBL:AE004447) (281 aa) fasta
FT                   scores: E(): 2.3e-33, 45.13% id in 257 aa, and to Rhizobium
FT                   leguminosarum ImpE SWALL:Q93EC9 (EMBL:AF361470) (276 aa)
FT                   fasta scores: E(): 1.4e-11, 29.21% id in 267 aa"
FT                   /db_xref="InterPro:IPR009211"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H2"
FT                   /protein_id="CAE40126.1"
FT                   /translation="MQTSVLAMPPRDGGLAGQAAAVQARIRRAPADADLRAQLFQLAAV
FT                   QGDWRRAAEQLQLCARLNPLAQPMANLYLAAIHGELRREAVLAGQAEPGFLAERPCWCE
FT                   PLLQALRAQASDPERAAMLRAQAFDAAQASAGTLEDAAAGQAGYAWICDGDSRLGPVCE
FT                   LILDGSYAWLPFAQVAAVHLPAPQGLCDLVWARAEIALADGAVVRGLVPARYPPSAGQD
FT                   DGLRLGRATCWRPLGQDGYAGEGQKMWLTDAGEFALLDVRALRRQAP"
FT   CDS             61887..62405
FT                   /transl_table=11
FT                   /locus_tag="BPP0718"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0087 SWALL:Q9I745 (EMBL:AE004447) (169 aa) fasta
FT                   scores: E(): 1.5e-21, 45.96% id in 161 aa, and to
FT                   Salmonella typhimurium and Salmonella enterica subsp.
FT                   enterica serovar Typhimurium putative cytoplasmic protein
FT                   Stm0269 or SciD SWALL:Q93IT2 (EMBL:AE008707) (164 aa) fasta
FT                   scores: E(): 2.1e-14, 35.33% id in 150 aa"
FT                   /db_xref="InterPro:IPR007048"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H1"
FT                   /protein_id="CAE40127.1"
FT                   /translation="MRIADERVARDRLQPSLLDRLVDDEPWRRSEAPEAALLTHAGLRA
FT                   AVLRDLRWLLNTVNLASSQDLAPYRHVPASSVNFGVRAMAGRRMSEIDWVDVETSIRDA
FT                   IAAFEPRILESSVEVRCVSDTRTLEHHNVLSLEIRGMLWCVPHPREFLFRTDIDLESGH
FT                   MDLRDLGGA"
FT   CDS             62405..64318
FT                   /transl_table=11
FT                   /locus_tag="BPP0719"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Salmonella typhi hypothetical protein
FT                   Sty0289 SWALL:Q8Z978 (EMBL:AL627266) (627 aa) fasta scores:
FT                   E(): 5.5e-55, 45.69% id in 639 aa, and to Salmonella
FT                   enterica subsp. enterica serovar Typhimurium SciC protein
FT                   SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E():
FT                   2.7e-54, 45.38% id in 639 aa"
FT                   /db_xref="InterPro:IPR010272"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1H0"
FT                   /protein_id="CAE40128.1"
FT                   /translation="MDARLLDYYNRELVYMRELGAEFARQHPKVAGRLGMHGTEVADPY
FT                   VERLLEGFSFLAARIHLKMDAEFPRFTQRLLEVVHPHYLAPTPAMAVAQFSPSMNEGTL
FT                   AGGFTLPRGTVLRGGLARGEQTPCEFMTGHALRLWPLRVTAAELTGAPTDLPLARLGLG
FT                   GREAGVASALRLRLEVCGGVSLEELDLDQLVFYLNGSDAPMQRLLELIMCHTVAVLGHD
FT                   SERPVSWINRLPADAVRHEGFADDQALLPTDTRVFQGYRLLQEYFAFARRYLFFSLNGL
FT                   KQGLCTRRAAPAAAAGPAGTRRFDLTLLLSAAAPELEGAISAGNLALHCAPIVNLFPRR
FT                   ADRVAVTPRHHEYHVVVDRTRPLDFEVYSLTRVLGHMSAQRPEQEFRPFYGSFGADADD
FT                   YGAYYSLRREPRLASDSARRHGTRTSYTGSEVYLSLVDRHEAPFADTLRHLGIDALCTN
FT                   RDLALLLPLGGASDFSLRVSAPVGAIKVLHGPSRPAAAMADHGTAWQLISHLGLHYHSL
FT                   TDLDETRGAQTLRELLNLYGNLADPVARKHISGVRHVRVEPMHHRLPVPGPIVYGRGVR
FT                   IDLQVDETAFSGISPYLCGAVLEQFFARHVSINMMSALTLSTPQRGAVASWRPRMGRRP
FT                   AV"
FT   CDS             64353..65012
FT                   /transl_table=11
FT                   /locus_tag="BPP0720"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Yersinia pestis hypothetical protein
FT                   Ypo0511 SWALL:Q8ZII7 (EMBL:AJ414143) (205 aa) fasta scores:
FT                   E(): 0.72, 26.81% id in 179 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G9"
FT                   /protein_id="CAE40129.1"
FT                   /translation="MQTRNARRLYPVYDPVHLIGTVARREDDGAWTVWCDGRPWRVRRA
FT                   ASCLLVPEEGDTALISGPDAERVYLIAVIEQADAAQATLELEGRVSLRSRTADVSLEAA
FT                   GEVRLRGAQAVRVETEALSVKAGQAACAAARMHYVADEVEGAVGSMRLVGKVYEAVLDR
FT                   LTQLARMAVRQTSEVEHVRAGTLDYQAEQSARVHAPYTMLTADALVKVDAKQIHMG"
FT   CDS             65015..66109
FT                   /transl_table=11
FT                   /locus_tag="BPP0721"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0089 SWALL:Q9I743 (EMBL:AE004447) (348 aa) fasta
FT                   scores: E(): 8.3e-46, 43.39% id in 348 aa, and to Yersinia
FT                   pestis hypothetical protein Ypo2948 SWALL:Q8ZCN3
FT                   (EMBL:AJ414154) (341 aa) fasta scores: E(): 3.8e-34, 37.98%
FT                   id in 337 aa"
FT                   /db_xref="InterPro:IPR010732"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G8"
FT                   /protein_id="CAE40130.1"
FT                   /translation="MDAAARTDRHAAPAVLPPAFWQALAAAPHGHDLFHVLRWIDARAG
FT                   ARAPLGRGASPRHEPVRMRQEPSLAFAPATLAAARAPGEGAAPELSIYSFGLFGPNGPL
FT                   PLPLHLTEHARERRQHHGDHSLAAFADLFHHRLILLFYRAWADAQSTASLDRGQERFSG
FT                   YVASLLHLGAPSLRRRDSVMDHAKYHMAGHLLRQTRNPEGLCQVLRAFFGLPVGVDEFV
FT                   AQWIRLEAGQRLRLGAGGGLGGGAPLGVAVRDAQHKFRIRLGPLDWQDYLAFLPGSARA
FT                   RQLLHWVRLYVGVEFAWEVRPVLRRDAVRSVRLGAAAPLGLASWLGRRPPRLGDAAELL
FT                   LDYEGRERQAARRAQAFHEKEQAA"
FT   CDS             66106..66639
FT                   /transl_table=11
FT                   /locus_tag="BPP0722"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Salmonella typhimurium and Salmonella
FT                   enterica subsp. enterica serovar Typhimurium putative
FT                   cytoplasmic protein Stm0288 or SciV SWALL:Q93IR4
FT                   (EMBL:AE008708) (173 aa) fasta scores: E(): 1.6e-30, 47.9%
FT                   id in 167 aa, and to Salmonella typhi hypothetical protein
FT                   Sty0317 SWALL:Q8Z956 (EMBL:AL627266) (145 aa) fasta scores:
FT                   E(): 1.7e-27, 51.07% id in 139 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G7"
FT                   /protein_id="CAE40131.1"
FT                   /translation="MIHDMSYDGQILAWPGHGQFRATSGMRGFQHPGQACTPDSGPVPP
FT                   GLYRVLLADRGVALDDGRGVCNLAPAWGIQQVPRGAAAGECESYWANWGENRARMEPAD
FT                   AATRNRCAPARGGFYLHDSTKGFSHGCIEVEGRIFALLRSYARQRGRNAMILKVAYVAD
FT                   RATNGGTAGDGHAR"
FT   CDS             66629..67006
FT                   /transl_table=11
FT                   /locus_tag="BPP0723"
FT                   /product="putative exported protein"
FT                   /note="Similar to Brucella melitensis hypothetical protein
FT                   Bmeii1078 SWALL:Q8YB23 (EMBL:AE009740) (125 aa) fasta
FT                   scores: E(): 9.3e-08, 40.54% id in 111 aa, and to
FT                   Pseudomonas aeruginosa hypothetical protein Pa1149
FT                   SWALL:Q9I4I6 (EMBL:AE004545) (122 aa) fasta scores: E():
FT                   2.1e-06, 33.33% id in 123 aa"
FT                   /db_xref="InterPro:IPR018696"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G6"
FT                   /protein_id="CAE40132.1"
FT                   /translation="MRADRHAWLLAACLAPALAAAGPLRVENRLAECVRVQPGLRSVEH
FT                   NVVLQRFDLTVVRPIGDCGCKSALVAYQASVVREDGTRGASQSGVFGAMRSGPRTLPLA
FT                   SDAALLGERPVALGLGCAPAD"
FT   misc_feature    66629..66691
FT                   /note="Signal peptide predicted for BPP0723 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.635 between residues 21 and 22"
FT   CDS             67030..69603
FT                   /transl_table=11
FT                   /locus_tag="BPP0724"
FT                   /product="putative ATPase with chaperone activity"
FT                   /note="Similar to Salmonella typhimurium and Salmonella
FT                   enterica subsp. enterica serovar Typhimurium putative
FT                   ATPase with chaperone activity, homolog of yersinia ClpB
FT                   Stm0272 or SciG SWALL:Q93IS9 (EMBL:AE008707) (879 aa) fasta
FT                   scores: E(): 1.8e-131, 54.25% id in 881 aa, and to
FT                   Salmonella typhi ClpB-like protein sty0294 SWALL:Q8Z973
FT                   (EMBL:AL627266) (887 aa) fasta scores: E(): 2e-130, 53.68%
FT                   id in 881 aa"
FT                   /db_xref="GOA:Q7W1G5"
FT                   /db_xref="HSSP:1JBK"
FT                   /db_xref="InterPro:IPR004176"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G5"
FT                   /protein_id="CAE40133.1"
FT                   /translation="MSDIGRAELFGKLDSLSYRALEDATALCKLRGNPYVELAHWVHAI
FT                   AHAQDSDLHHIARAFELDLGALQQDLVRALDQLPRGAGAVSDLSEHVDHVVERAWALAS
FT                   LRYGAARIRSGHLLLALLRDPSLRGVLAGMSGQFARVVPDLLLQGLPEMTRGSPEARAD
FT                   AAVADAPPDGGGAAGALARYAVDLTAQARAGRLDPVTGRDDEIRQLIDVLMRRRQNNPL
FT                   LTGEAGVGKTAVVEGLALRLARGDVPAPLREVALYLLDIGLLQAGAGVKGEFEQRLRQV
FT                   IDAVQGSERPIVLFIDEIHTLVGAGGAAGTGDAANLLKPALARGQLRTIGATTWAEYKQ
FT                   YIEKDPALTRRFQAIQVHEPDEAGARRMLRGLAGALQAHHGVLLLDEAVEAAVRLSHRY
FT                   IPARQLPDKAVALLDTACARVAVSQQATPAALEDARRRIDALDLELEIAAREARLDAGP
FT                   AERVAGLREQGQAARWEREAALAGQVFGLREQLDAADEQSAPALRAALREAADALARSQ
FT                   GEAPLIHPAVDAAAVVADWTGIPVGRMVRDEAQAVLALADTLERRVVGQRHALELIARR
FT                   IQTARAGLTDPGKPVGVFLLCGPSGVGKTETALALAEALYGGEQNLITINMSEFQESHT
FT                   VSTLKGAPPGYVGYGEGGVLTEAVRRRPHSVVLLDEVEKAHADVHEIFFQVFDKGWMED
FT                   GEGRYIDFRNTVILLTANVGADLIASLCADPELAPEPDALAAALRAPLRDVFPAALLGR
FT                   LAAVPYLPLSDSMLAHIVALQFERVGQRLRERHGMDLEVEPAAAELVVARCVEVESGAR
FT                   MVDAILSQRVLPQIGRELLGASLQQRTWRRVRVRAVDGEFACEYE"
FT   misc_feature    67687..68271
FT                   /note="HMMPfam hit to PF00004, ATPase family associated
FT                   with various cellular activities (AAA), score 8.4e-07"
FT   misc_feature    67702..67725
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    67966..68004
FT                   /note="PS00870 Chaperonins clpA/B signature 1."
FT   misc_feature    68821..68844
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(69702..70502)
FT                   /transl_table=11
FT                   /locus_tag="BPP0725"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Pseudomonas aeruginosa transcriptional
FT                   regulatory protein AlgP or AlgR3 or Pa5253 SWALL:ALGP_PSEAE
FT                   (SWALL:P15276) (352 aa) fasta scores: E(): 0.49, 29.77% id
FT                   in 262 aa, and to Rhizobium loti probable esterase Mlr0240
FT                   SWALL:Q98N93 (EMBL:AP002994) (316 aa) fasta scores: E():
FT                   0.93, 28.72% id in 275 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G4"
FT                   /protein_id="CAE40134.1"
FT                   /translation="MMLTLIVRNPEPGASARRADFHAPGGTLGRDAENCLALPAAPGQL
FT                   CRVQAALRADAQGWRLHNLSGMAAVHINDAALAPGAVRAIQAGDTLRVGAHTLEVSGPD
FT                   APDARPAALPEAAADTPADAPRRGQAGAGAAEDIFSGLFGPGTLPVGGTADAATHPFDL
FT                   DSAQARNAADPLAHLPAGDAAVSRPAGDPLALFDAPHGGADVFADATPSALPAHDPLAP
FT                   LRADPVRDTLLPRHAAGDGPAAHDHAPAGGTFLRPAAPRADQAD"
FT   CDS             complement(70530..70925)
FT                   /transl_table=11
FT                   /locus_tag="BPP0726"
FT                   /product="putative lipoprotein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G3"
FT                   /protein_id="CAE40135.1"
FT                   /translation="MTLRFHATLLGCAILLAGCASPTSERAGEPASDQAERDLQQIRQS
FT                   YSAGAYGDVIRQVAHADALAQAPQSMRIEAWKLQAFSYCVTDHRVLCEAGFRRILQADP
FT                   AFTLEPNEAGHPQWGPAYERARAAPAG"
FT   misc_feature    complement(70845..70925)
FT                   /note="Signal peptide predicted for BPP0726 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.813 between residues 27 and 28"
FT   misc_feature    complement(70869..70901)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             71190..71732
FT                   /transl_table=11
FT                   /locus_tag="BPP0727"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa1666 SWALL:Q9I359 (EMBL:AE004594) (168 aa) fasta
FT                   scores: E(): 3.4e-14, 37.76% id in 143 aa, and to
FT                   Salmonella typhi probable lipoprotein Sty0303 SWALL:Q8Z967
FT                   (EMBL:AL627266) (178 aa) fasta scores: E(): 1.2e-13, 31.21%
FT                   id in 173 aa. Possible alternative translational start
FT                   site"
FT                   /db_xref="InterPro:IPR017734"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G2"
FT                   /protein_id="CAE40136.1"
FT                   /translation="MLVAVPTRRALRAAAWIAVAVLAAGCASTASRKAAPYAIELKADP
FT                   RINPDASGRPSPIQVTLYELRSSAEFEARDFFTLQGDAQAALGKSLIETDQVILQPGET
FT                   RKLSYPGNTEARVVGIVAAYRDLERSPWRIVVPLPQAQNTNIYKFWQFSPNEETVRVAV
FT                   GGQGVQIVDRERSWWPF"
FT   misc_feature    71190..71291
FT                   /note="Signal peptide predicted for BPP0727 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.992) with cleavage site
FT                   probability 0.607 between residues 34 and 35"
FT   misc_feature    71235..71267
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    71436..71459
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             71778..73112
FT                   /transl_table=11
FT                   /locus_tag="BPP0728"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Rhizobium leguminosarum ImpJ SWALL:Q93EC4
FT                   (EMBL:AF361470) (446 aa) fasta scores: E(): 2.2e-70, 46.1%
FT                   id in 449 aa, and to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0079 SWALL:Q9I753 (EMBL:AE004447) (444 aa) fasta
FT                   scores: E(): 4.7e-79, 47.86% id in 445 aa"
FT                   /db_xref="InterPro:IPR010263"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G1"
FT                   /protein_id="CAE40137.1"
FT                   /translation="MALDNKVVWSEGMFLRPQHFQQFERHIEAQLRVRAAVASGCGWGY
FT                   TALEIDRDALALGKLALARAAGVLPDGTPFEFERADEGPPALDIDPAMRDARVMLALPR
FT                   RRAGACEVVYEDGADTLARYCVHEGEIEDSGSVGLEPALVQLGRLRLRLVPETELGDEW
FT                   VALGAARVLERRADHRVVLDEMYIPPWLAADANPALRGYAGELSGLLQARGAALAQRLA
FT                   QPGRGGVSEVADFLLLALVNRYAGALWHARQVPALHPERLFRDWLMLACDLATYTCATR
FT                   LPEVLPDYRHDDLQASFGPLMAELRRSLSVVLEQHAVQIPLHDRGQGVRVAQIADAELL
FT                   RSAGFVLAVHADMPAETVRTRFPAQVKIGPVERIRDLVHLQLPGVAVRALPVAPRQIPY
FT                   SAGHVYFELDKNGEFWRQLERTGALALHLAGEFPGLALEFWAVRD"
FT   CDS             73133..74413
FT                   /transl_table=11
FT                   /locus_tag="BPP0729"
FT                   /product="putative outer membrane protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0078 SWALL:Q9I754 (EMBL:AE004447) (449 aa) fasta
FT                   scores: E(): 3.1e-68, 49.16% id in 417 aa, and to
FT                   Salmonella typhimurium and Salmonella enterica subsp.
FT                   enterica serovar Typhimurium putative outer membrane
FT                   protein, OmpA family Stm0282 or SciP SWALL:Q93IS0
FT                   (EMBL:AE008707) (434 aa) fasta scores: E(): 2.8e-44, 38.94%
FT                   id in 398 aa"
FT                   /db_xref="GOA:Q7W1G0"
FT                   /db_xref="InterPro:IPR017733"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1G0"
FT                   /protein_id="CAE40138.1"
FT                   /translation="MHAANPPFPDFGADAAADPGAASRLRPHEYVISGSNPLVAAANPL
FT                   LDLIPQIRATTAHPAPAMLREYLVDEVRQFELRAQQAGIPNETILGARYCLCTALDEAA
FT                   ALTPWGGGGVWSAHSLLVTFHNETWGGEKFFQLLAKLSQNPGQHLDLLELLYYCLLLGF
FT                   EGRYRVIDNGRTQLETLRQRLLRILRGARGEYPRALSPHWRDTPVQQALRRLPVPLWAY
FT                   GALAAALALALFWGLSWRLGERSDAVFAAVARLKPPTVQIAPAPRPAPAPRLAVFLQPE
FT                   VRDRLVTVRDEVDRSVVVLRGDGLFESGAVAVRDRYAPVLARVAEALGQTRGDIVVRGY
FT                   TDNVPIRTARFPSNWHLSQARAEAVKAVIDARLGQAGRVRAEGRGEADPLAPNDTPAGR
FT                   SVNRRVEITVMVPPAPHARTPEEGATP"
FT   misc_feature    73781..73849
FT                   /note="1 probable transmembrane helix predicted for BPP0729
FT                   by TMHMM2.0 at aa 217-239"
FT   misc_feature    74045..74341
FT                   /note="HMMPfam hit to PF00691, OmpA family, score 6.2e-21"
FT   CDS             74410..78015
FT                   /transl_table=11
FT                   /locus_tag="BPP0730"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Rhizobium leguminosarum ImpL SWALL:Q93EC2
FT                   (EMBL:AF361470) (1158 aa) fasta scores: E(): 2.3e-41,
FT                   32.42% id in 1209 aa, and to Rhizobium loti hypothetical
FT                   protein Mlr2360 SWALL:Q98IK4 (EMBL:AP002999) (1176 aa)
FT                   fasta scores: E(): 3.6e-108, 34.32% id in 1215 aa"
FT                   /db_xref="InterPro:IPR009612"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F9"
FT                   /protein_id="CAE40139.1"
FT                   /translation="MIPRLFGWLFSRGLWSFLGLVALALLVWIAGPLLAIGALRPLESE
FT                   TARVLVIAALFAFALLRLLWRKWREGRLNAQLLGQLRRPARPEAEAAAEPPPSDLRELE
FT                   GRFDEAVELLRKTRFDGGGGRGWLQRYSRQYLYQLPWYVIIGAPGSGKTTALVNSGLDF
FT                   PLAERFGKAALRGVGGTRNCDWWFTDDAVLLDTAGRYTTHESDPTGDEESWRGFLGLLT
FT                   RFRGRQPINGAMLTVSIEDLLAASDAERARHAAVLRRRLQELREQLGIHFPVYVLVTKA
FT                   DLLAGFEQYFASFSREDLEQVWGFTLPYARAQEPDFDLYEAFHAEYRLLQRRLDDALPE
FT                   VLAAEPDEARRALAYLLPQQFAGLQAVLGHFLSDVFASSRFEERLVPRGVYFTSGTQGG
FT                   ETFDQVTGHLKRYLRIESGPAPAAAEEGRSFFLKRLLQDVIFPEAGLAGRNLRWERRYR
FT                   RLHWAGYGLITLAFLGLAAGWLASYGNNVRYLDEVARRVPTVDKLGRDIKITRSGDVLG
FT                   LMPFLDGLWYLPRDAAFEPDAPPLSYRFGLYQGGKMHAAMQGVYRGTLDSVLLPQVARR
FT                   IEAALRAARADDLEYGYEALRAYLMLYEADHYDAEFMHAWLLSDMQGTLPEGYTRRQYD
FT                   LMSLHLRQLAQGGVLASPFPRDEALVRQARDELARHTLAQRAYSRLRRMLAGADDQPPT
FT                   TAVTLGGPQASAVFVRKSGKPLAQGIAALYTYRGYWDVFNPRVTRVAERLRSDDAWVLD
FT                   IAPPGVLDEAARQQLIVDIKRLYLNDYVARWDGYLDDLALAPRSSLLQSIQLARTLSAP
FT                   DSPLVRLTQGVARETTLLRDAGGDERSLADQARDRVSSTREALEQMFGPTGPGAATRAD
FT                   AGDGKLERVVDQHFEPWRRLARADGQGGAPIAATTSLVNELYTYLTAADAALRSASPAP
FT                   ASDVVTKLRAEAGRLPRPLRDVLDDLSTGAAGEVSGVARERLGEDLYATIGLFCRQAIA
FT                   GRYPFAPGSPRDVAPNDLARLFAPNGMIDEFFQKNLVSQIDVSEARWRFKPGMDGTPGQ
FT                   ASALLDSFQRAAAIRDAYFMAGSAEPAFRVSIRPVEMDPAITQFVMDVDGQTVRYAHGP
FT                   QVATSVQWPGPRGANQVRIELTPQAGAAGLSASGPWALNRLLDQARVTRGASPEISLAS
FT                   FDIGGRKVVLEIRAGSVRSPFHLAEMRGFSCPGRS"
FT   misc_feature    74410..74514
FT                   /note="Signal peptide predicted for BPP0730 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.997) with cleavage site
FT                   probability 0.941 between residues 35 and 36"
FT   misc_feature    join(74446..74514,74545..74604,75787..75855)
FT                   /note="3 probable transmembrane helices predicted for
FT                   BPP0730 by TMHMM2.0 at aa 13-35, 46-65 and 460-482"
FT   misc_feature    74845..74868
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             78012..78746
FT                   /transl_table=11
FT                   /locus_tag="BPP0731"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa0076 SWALL:Q9I756 (EMBL:AE004446) (226 aa) fasta
FT                   scores: E(): 1.6e-10, 31.79% id in 195 aa"
FT                   /db_xref="InterPro:IPR017748"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F8"
FT                   /protein_id="CAE40140.1"
FT                   /translation="MSGGRAMPGADPDGGVGWYGKIPAAGDFMRRRLSHGLVAWWDKWL
FT                   QYGLAALRQMPAGGAERAYAAAPLWNFAIPAGAGAGAVLLGGMAPSRDRVGRAYPLSAM
FT                   AVVPAQAYQPGLLEDAGDYYRQLGATLLAAVRRGGAAEQLDRQLQAMPLPVAMPPARPA
FT                   PAGQDILDILNAGQAGNAPLAGARGLAAWPELPFCFNPGSHTSYWWTNQADGAALQTYV
FT                   HGGALNATLFLRLFAAPPAWRV"
FT   CDS             78771..79973
FT                   /transl_table=11
FT                   /locus_tag="BPP0732"
FT                   /product="hypothetical protein"
FT                   /note="Weakly similar to Micrococcus sp. 28 proline-rich
FT                   extensin-like protein SWALL:Q8VPM8 (EMBL:AY034092) (406 aa)
FT                   fasta scores: E(): 0.00013, 32.58% id in 267 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F7"
FT                   /protein_id="CAE40141.1"
FT                   /translation="MRPSSATDTASVLEAAAPRPLGVDAAAPMPPARVRRVLADLLEQL
FT                   APLHERWRVHGRIAPRTVGLDGDGRARLLVDAAQPAADAEALAHAAGFAAFEQYSDDPG
FT                   QPCGPWTDIYGLSALAYALATGAAPPSALRRCVRDDCAPLARRLDEKRWQALAQAIDAG
FT                   LALDYRDRPASLAAFARLLDAADRQAEPPPIAPVASATSATVAVAQAPAPAALPSRAPA
FT                   RRPARTSALAVLAVLAVLAVVLYAALGGRAGDEPAASLAAAPMPAPTSAPTSAPMPAPE
FT                   PAPEPPAPAPEPSPASEPAPLPEPTPTPESVSAPAPQPAPAPAAPPPAAPQPVSVRVDI
FT                   RPWGEVWIDGRSRGVSPPLKQLSLPPGRYAVTVRNPAGPDHRLDLHVAAGQGAAIAHAF
FT                   E"
FT   misc_feature    79452..79520
FT                   /note="1 probable transmembrane helix predicted for BPP0732
FT                   by TMHMM2.0 at aa 228-250"
FT   CDS             join(80071..81159,81163..81237)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0733"
FT                   /product="putative calcium/proton antiporter (Pseudogene)"
FT                   /note="Similar to Escherichia coli calcium/proton
FT                   antiporter ChaA or B1216 SWALL:CHAA_ECOLI (SWALL:P31801)
FT                   (366 aa) fasta scores: E(): 9.6e-14, 33.14% id in 347 aa,
FT                   and to Mycobacterium leprae putative antiporter Ml1267 or
FT                   Mlcb1610.29 SWALL:Q9X7C4 (EMBL:AL049913) (364 aa) fasta
FT                   scores: E(): 5.3e-32, 36.38% id in 371 aa"
FT                   /db_xref="PSEUDO:CAE40142.1"
FT   misc_feature    join(80131..80199,80209..80277,80314..80382,80425..80484,
FT                   80518..80586,80614..80673,80794..80862,80872..80940,
FT                   81001..81069,81082..81150,81169..81228)
FT                   /note="11 probable transmembrane helices predicted for
FT                   BPP0733 by TMHMM2.0 at aa 21-43, 47-69, 82-104, 119-138,
FT                   150-172, 182-201, 242-264, 268-290, 311-333, 338-360 and
FT                   367-386"
FT   CDS             81411..82823
FT                   /transl_table=11
FT                   /locus_tag="BPP0734"
FT                   /product="putative lipoprotein"
FT                   /note="Similar to Rhizobium meliloti hypothetical protein
FT                   Ra0574 or Sma1060 SWALL:Q92ZB6 (EMBL:AE007247) (465 aa)
FT                   fasta scores: E(): 8.6e-54, 39.65% id in 459 aa, and to
FT                   Listeria monocytogenes hypothetical protein Lmo0525
FT                   SWALL:Q8Y9K2 (EMBL:AL591975) (443 aa) fasta scores: E():
FT                   5.1e-31, 32.23% id in 456 aa"
FT                   /db_xref="InterPro:IPR010679"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F6"
FT                   /protein_id="CAE40143.1"
FT                   /translation="MGKATWRQVWERARALAGAAALAVLAGCAAPGAQDPGQARNTARE
FT                   AYIYAYPMLYHYRSMYEQAIDTASPAYLGGFGVFQHRAEPYTPQSVDVATSNVDTLYSR
FT                   AWLDLRAEPWVLSLPAVPKSRYNAFQLVDMYTYNLAYLGTRATGFGSGHYLIAGPGWTG
FT                   PVPKGITQVVRADTDFVAVLGRTALNGPADIKAVHALQARYGLRPLSAYTGTAAPAGAP
FT                   PVDWLPWNEQRASSIGFIAYLNQLLAHTQPQPESEADMMARFARIGIAPGRDFEPARLD
FT                   AATRRAMDAGIVDAQQAIEQGARHAAAPATPASLYGSREQLGGDYLKRAVAAAVGIYGN
FT                   TADEAIYLTIGEDAQGRPLDGARAYELRFAPGRQPPVRFFWSISVYALPARGLAENPID
FT                   RYAIGSRTKGIKRGRDGSLTVYLQHDAPARAHAPNWLPTPAGPFVVVARFYGPQPALRD
FT                   GAWVMPALVPAR"
FT   misc_feature    81411..81509
FT                   /note="Signal peptide predicted for BPP0734 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.997) with cleavage site
FT                   probability 0.663 between residues 33 and 34"
FT   misc_feature    81462..81494
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(82831..85785)
FT                   /transl_table=11
FT                   /locus_tag="BPP0735"
FT                   /product="autotransporter"
FT                   /note="Similar to Agrobacterium tumefaciens autotransporter
FT                   protein YapE or Atu5364 or Agr_pat_528 SWALL:AAL46052
FT                   (EMBL:AE008958) (868 aa) fasta scores: E(): 8.8e-38, 30.3%
FT                   id in 881 aa, and to Bordetella pertussis BapA protein bapA
FT                   SWALL:Q9F4B4 (EMBL:AJ277632) (903 aa) fasta scores: E():
FT                   4.7e-21, 26.14% id in 895 aa"
FT                   /db_xref="GOA:Q7W1F5"
FT                   /db_xref="InterPro:IPR004899"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F5"
FT                   /protein_id="CAE40144.1"
FT                   /translation="MLRHLGWLAACCAASAYAADYPGLTLNPGDDFTLQGNDTVNGATA
FT                   VRMSSATLNFGAGPITVNATGTGIFATNGAGALINFLPSSVVTLNVTSPTAGVGILTSS
FT                   SSNTAIDLQADSSLTINAYQGINLAHTPRAAPNRLSIGDGATLRVNASGTGMAPKGLLI
FT                   NNNNSVVVASGGTLGLGTSGGRYARALESSISLTYPDAAADKFTAAPGSNLNLSTTGQD
FT                   SDAFYMLGVGEALMQGNTDIHTTGANSTGFYLYRYGAPTSHLLVAPHAGGHATILTEGQ
FT                   GSHGLWAINGSQAEFANASLQTRGDEAAGLYALTTIGETTTQVRAADTAIATAGAQSYG
FT                   VLAQGYGTDVALTRGTVATSGAQAHAVVVAGESRFSADGTAIQAQGDGAMALLMSSDRD
FT                   AQTATVSGGSLRGSAIGIEGGTARVELDGTAVDGATNWLHVADSGALAVLRDVTVPGRD
FT                   PSQTDAPAFPAILHGTRAAGIAATATVVARNADLTGAAITEPGNTSHVTLIDTTWHMTG
FT                   SSTITNLVNDPSLIDFAAPQGGAYKTLTVGNYSGDGTIALNTYLGADDSPSDKLVIDGG
FT                   TASGSSKLRIKNTGGPGAATQAQGILVVDTRNGGTTTATAFSLSEPVVVGAYDYQLYRG
FT                   AQTPEQEQNWYLRSAILPPVDPTNPDQPGEPIPTYRPETPGAVMAPEVARQVGARMLDT
FT                   FHDRMGDQYALLNSAQRKAGWGRVIGQRLTQRWDGDVEPRFKGNIWIAQAGADMLERDR
FT                   DDGLSDRLGLFSAYGQADGRVDGFVQGEHGKQAGKLRVEAYGLGLYWTRLKHTNWYWDN
FT                   VLMGNYYTGRSRSDRGVAASLEGWGFTASSEAGYSFFPRHDIMLQPQAQLVYQYTSLDN
FT                   THDAYSTIRYHGGGALTGRIGLLLQGNADQPERIRPYARINLWHRFSHGESVSFGPSDS
FT                   IRTEYGSTSMDLRIGLAAPLNRQTELYASAGYGFDLDGNQRQAYYGNIGVRYSW"
FT   misc_feature    complement(82837..84180)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF03212, Pertactin, score 1.8e-08"
FT   misc_feature    complement(85732..85785)
FT                   /note="Signal peptide predicted for BPP0735 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.997 between residues 18 and 19"
FT   CDS             join(86235..86705,86709..87713)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0736"
FT                   /product="putative phospholipase D protein (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3092"
FT                   /db_xref="PSEUDO:CAE40145.1"
FT   misc_feature    join(86664..86705,86709..86747)
FT                   /note="HMMPfam hit to PF00614, Phospholipase D. Active site
FT                   motif, score 0.26"
FT   variation       86706..86708
FT                   /note="In-frame TAG stop codon in parapertussis; CAG in
FT                   pertussis"
FT   misc_feature    87381..87464
FT                   /note="HMMPfam hit to PF00614, Phospholipase D. Active site
FT                   motif, score 4.6e-05"
FT   CDS             complement(87720..88829)
FT                   /transl_table=11
FT                   /gene="modD"
FT                   /locus_tag="BPP0737"
FT                   /product="molybdenum transport ATP-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3093"
FT                   /db_xref="GOA:Q7W1F4"
FT                   /db_xref="HSSP:1US8"
FT                   /db_xref="InterPro:IPR005116"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1F4"
FT                   /protein_id="CAE40146.1"
FT                   /translation="MPSDFPPGQAGIHARFRVDYPEFSLDVDLRLPGRGVTALFGQSGS
FT                   GKTTCLRCMAGLAPVSDGYLDINGEVWLDSAARRAVPTHKRALGYVFQEASLFEHLDVL
FT                   ANLRYGMKRVPPALRRVDLEQATGLLGIGHLLARMPAGLSGGERQRVGIARALLTSPRL
FT                   LLMDEPLAALDVQRKREILPYLERLHDELDIPVIYVSHSPDEVARLADHLVLLEQGRAV
FT                   ASGPLDALLTRLDLPMAMTDDASVVVTGEAAGFDPGYALLTLQLPGGRARLRFVHQAAP
FT                   AGQRLRVVVHARDVSLALQQPREGSILNVLAVRVLEMAPAANPAHVMVRLDADGTPLLA
FT                   RITRYSRDRLALAPGMQAWAQIKAVSLLA"
FT   misc_feature    complement(87726..87917)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF03459, TOBE domain, score 2.2e-11"
FT   misc_feature    complement(88173..88730)
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   3e-48"
FT   misc_feature    complement(88359..88403)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(88686..88709)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(88841..89521)
FT                   /transl_table=11
FT                   /gene="modC"
FT                   /locus_tag="BPP0738"
FT                   /product="molybdenum transport system permease protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3094"
FT                   /db_xref="GOA:Q7W1F3"
FT                   /db_xref="InterPro:IPR011867"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F3"
FT                   /protein_id="CAE40147.1"
FT                   /translation="MSLTSADWAAIWLTIELASLTTLLLLVIGTPIAWWLARTRSRLKG
FT                   PVGAIVALPLVLPPTVIGFYLLVAMGPNGYVGQLTQSLGLGTLPFTFAGLVVGSVFYSM
FT                   PFVVQPLHNAFEAIGRRPLEAAATLRAGPWDRFVSVALPLARPGFVTAGILDFAHTVGE
FT                   FGVVLMIGGNIPGKTRVVSVQIFDHVEALEYAQAHWLAGGMVVFSFIILLLLYSRRQRA
FT                   TAAL"
FT   misc_feature    complement(join(88871..88936,89045..89110,89198..89263,
FT                   89309..89374,89411..89476))
FT                   /note="5 probable transmembrane helices predicted for
FT                   BPP0738 by TMHMM2.0 at aa 15-37, 49-71, 86-108, 137-159 and
FT                   195-217"
FT   misc_feature    complement(88952..89182)
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 6.6e-14"
FT   misc_feature    complement(88988..89011)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(89543..90298)
FT                   /transl_table=11
FT                   /gene="modB"
FT                   /locus_tag="BPP0739"
FT                   /product="molybdate-binding periplasmic protein precursor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3095"
FT                   /db_xref="GOA:Q7W1F2"
FT                   /db_xref="InterPro:IPR005950"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F2"
FT                   /protein_id="CAE40148.1"
FT                   /translation="MKIRAIPTLWALAATLLAAPALAGEVQVAVAANFTAPMQAIAKAF
FT                   EEDTGNRAVASFGATGQFYAQIKNGAPFEVFLAADDSTPAKLDAEQETVPGSRFTYATG
FT                   ALALWSARAGYVDDQGAVLKQGDFKHLSIANPKTAPYGLAATQVLAKLGLADKLAPRIV
FT                   EGQSISQAYQFVASSNAELGFVALSQIYKDGKLTGGSAWIVPASMHEPIRQDAVILKKG
FT                   QDNATARAFVEYLKSPRSAAIIKSFGYQL"
FT   misc_feature    complement(90230..90298)
FT                   /note="Signal peptide predicted for BPP0739 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.974 between residues 23 and 24"
FT   CDS             complement(90434..91318)
FT                   /transl_table=11
FT                   /locus_tag="BPP0740"
FT                   /product="putative hydrolase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3096"
FT                   /db_xref="GOA:Q7W1F1"
FT                   /db_xref="InterPro:IPR000073"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F1"
FT                   /protein_id="CAE40149.1"
FT                   /translation="MMPGNAAPRPVHYRHEQVGDVKIFYREAGDPASPAVLLLHGFAAS
FT                   SYMYRDVIAALADGYRVVAPDLPSFGFTESPARDAYAYTFDNITRTMDRFTEQLKLDRY
FT                   ALMVHDYGAPVGWRLASAHPDRVTALVSQNGNAYEEGLAQGWDAIRRYWASPTAENRAA
FT                   LHGFPTPASIKWQYLEGVPDPSLVAPDGYTLEGLQVSRPGNAEIQLDLLLDYASNVQRY
FT                   PQFQAYFRDRQPPLLAVWGRNDPYFLPAGAEAWKRDIPAAEVRFYDTGHFALETHGAEI
FT                   IPAIRAFLDAKVR"
FT   misc_feature    complement(90452..91141)
FT                   /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold,
FT                   score 4.5e-24"
FT   CDS             91343..91987
FT                   /transl_table=11
FT                   /locus_tag="BPP0741"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3097"
FT                   /db_xref="InterPro:IPR010852"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1F0"
FT                   /protein_id="CAE40150.1"
FT                   /translation="MNLKVAWIRCNLSISNSLVTNMATPATHPPHFIANNLALDFINSA
FT                   FGVGPASHDCLGDDESVLAWLEAAGHVPAGLARPPAGLAELARALREAAARMVRAAQAG
FT                   QGGDAALVNQVLEAGRPARKLAWDDGQGGYTLAECPRDHSAASLLEPVAAALADLLAGD
FT                   ALRHVRRCEAHDCTLVFLDVTKSHRRRWCSMALCGNRMKVAAFRSRRQGAG"
FT   CDS             complement(92089..92211)
FT                   /transl_table=11
FT                   /locus_tag="BPP0742"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3098"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E9"
FT                   /protein_id="CAE40151.1"
FT                   /translation="MKQFAVTLLALFGVDAQASVAGPQRLLPILPGEPTRTERR"
FT   misc_feature    complement(92149..92211)
FT                   /note="Signal peptide predicted for BPP0742 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.890 between residues 21 and 22"
FT   CDS             complement(92257..92556)
FT                   /transl_table=11
FT                   /locus_tag="BPP0743"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3099"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E8"
FT                   /protein_id="CAE40152.1"
FT                   /translation="MRTFTSAALLAAALFGFNAFAGSGELDYPPAGAQGGSLTRSQVQH
FT                   ELAIARAAGQLVFGESQEPAPQLAGSAATRAQVQAELAQARNASAASEYVETGA"
FT   misc_feature    complement(92494..92556)
FT                   /note="Signal peptide predicted for BPP0743 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.991 between residues 21 and 22"
FT   CDS             complement(92708..93187)
FT                   /transl_table=11
FT                   /locus_tag="BPP0744"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3100"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E7"
FT                   /protein_id="CAE40153.1"
FT                   /translation="MDPPAWAALLEACALGAWMRGSSWAYPAANLAHLLGLVLLVGAML
FT                   LLDLRLLGLGRRFALADVSAVLTPLAAGGLLLQLASGALLFSADAAPLSGNALMQYKAA
FT                   GIALGVANALLFRALWGARLAGWDSRPPPWGRLQAALSLLLWLAVATLGRLIAYA"
FT   misc_feature    complement(join(92720..92785,92825..92878,92924..92989,
FT                   93029..93094))
FT                   /note="4 probable transmembrane helices predicted for
FT                   BPP0744 by TMHMM2.0 at aa 31-53, 66-88, 103-121 and
FT                   134-156"
FT   misc_feature    complement(93113..93187)
FT                   /note="Signal peptide predicted for BPP0744 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.612) with cleavage site
FT                   probability 0.608 between residues 25 and 26"
FT   CDS             complement(93203..93556)
FT                   /transl_table=11
FT                   /locus_tag="BPP0745"
FT                   /product="putative exported protein"
FT                   /note="Similar to Rhizobium meliloti hypothetical signal
FT                   peptide protein Smc00030 or R00945 SWALL:Q92RD9
FT                   (EMBL:AL591785) (128 aa) fasta scores: E(): 0.00011, 28.31%
FT                   id in 113 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E6"
FT                   /protein_id="CAE40154.1"
FT                   /translation="MTIRHLLAAGGLAAALAAPAWAHHGWSSYDADQTLTIEAPLTEVR
FT                   YRNPHAEVKVDYQGASWEVVLAPVSRMESRGLAKDALAVGKTVTIVGYPRKDGTHEVRA
FT                   ERITVDGKTIELR"
FT   misc_feature    complement(93491..93556)
FT                   /note="Signal peptide predicted for BPP0745 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.635 between residues 22 and 23"
FT   CDS             complement(join(93624..94484,94484..95716))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0746"
FT                   /product="probable TonB-dependent receptor (Pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3101"
FT                   /db_xref="PSEUDO:CAE40155.1"
FT   misc_feature    complement(93633..93962)
FT                   /note="HMMPfam hit to PF00593, TonB dependent receptor
FT                   C-terminal region, score 1.7e-10"
FT   misc_feature    complement(95651..95716)
FT                   /note="Signal peptide predicted for BPP0746 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.977 between residues 22 and 23"
FT   CDS             complement(95713..96216)
FT                   /transl_table=11
FT                   /locus_tag="BPP0747"
FT                   /product="putative regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3102"
FT                   /db_xref="GOA:Q7W1E5"
FT                   /db_xref="InterPro:IPR019888"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E5"
FT                   /protein_id="CAE40156.1"
FT                   /translation="MAILRQYGADRQLRLAICPNGLETAMDHALDALDRRLLALLRADA
FT                   RLPTATLARQLHVSRGTVQNRMARLERSGIVAGYTVRLRNEDEHGIRAITLIEVRGAAT
FT                   DAVVAALRRIPEALQVHSTNGRWDLVVELRAADLLAFDRVLRDLRSIDGVANSESNLLL
FT                   TAHR"
FT   misc_feature    complement(95758..96057)
FT                   /note="HMMPfam hit to PF01037, AsnC family, score 8.9e-07"
FT   CDS             96253..97536
FT                   /transl_table=11
FT                   /locus_tag="BPP0748"
FT                   /product="ornithine aminotransferase"
FT                   /EC_number="2.6.1.13"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0539"
FT                   /db_xref="GOA:Q7W1E4"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1E4"
FT                   /protein_id="CAE40157.1"
FT                   /translation="MVCRPGRTIPQETAMNMPAPAATRRDRIEDELGAHNYQPLDVVLA
FT                   RGSGVWLYDTAGRRYLDCLSAYSAVNQGHCHPRILAAMVEQAQRLTLTSRAFRHDQLAP
FT                   LYEDLARLTGAHKVLPMNSGAEAVETALKAVRKWGYEARGVPAGQAEIIVCANNFHGRT
FT                   LGIVGFSTDPDARGGYGPFAPGFTVVPFGDFAALQAAVTPRTVAFLVEPIQGEAGVILP
FT                   PPGYFRQVRKLCSERDIVLILDEIQTGLGRTGAFLAEAHEGIEADVTLIGKALSGGFYP
FT                   VSAVLSNQAVLGIFQPGQHGSTFGGNPLACAVARAALRVLHDEGMIDNAREQGAYFMQR
FT                   LRALPGPVREVRGRGLMLALELEPDAGPARAYCERLMARGMLVKDTHGQTLRLSPPLIV
FT                   TREQIDWACAQLAHVLAHSAPGSSGGPS"
FT   misc_feature    96343..97509
FT                   /note="HMMPfam hit to PF00202, Aminotransferase class-III,
FT                   score 6.9e-161"
FT   misc_feature    96973..97086
FT                   /note="PS00600 Aminotransferases class-III
FT                   pyridoxal-phosphate attachment site."
FT   CDS             97533..98477
FT                   /transl_table=11
FT                   /locus_tag="BPP0749"
FT                   /product="arginase"
FT                   /EC_number="3.5.3.1"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0538"
FT                   /db_xref="GOA:Q7W1E3"
FT                   /db_xref="HSSP:1CEV"
FT                   /db_xref="InterPro:IPR006035"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E3"
FT                   /protein_id="CAE40158.1"
FT                   /translation="MIAASFPHGVSLIGAPTDIGAGQRGASMGPEALRVAGLVRLLERR
FT                   GLQVTDRGNLQGAPNPWRPPANGYRHLNEVIGWNQLVHDAVSAELRQERLPILLGGDHS
FT                   LAIGSISAVARHCRASGRKLRVLWLDAHADFNTNRLTPTGNVHGMPVACLCGNGPAALT
FT                   GMAGRTPAIEPGWVRQIGIRSVDEGERNLVYDAGLEVYDMRYLDEVGMRAVMEAALAGL
FT                   DPQTHLHVSFDVDFLDPELAPGVGTTVPGGPTYREAQLCMEMIADTGLMRSLDIVELNP
FT                   ALDVHNKTAQVAVDLVESLFGKSTLMRRRPGSA"
FT   misc_feature    97548..98447
FT                   /note="HMMPfam hit to PF00491, Arginase family, score
FT                   5.4e-92"
FT   misc_feature    97827..97868
FT                   /note="PS00147 Arginase family signature 1."
FT   misc_feature    97908..97934
FT                   /note="PS00148 Arginase family signature 2."
FT   misc_feature    98223..98288
FT                   /note="PS01053 Arginase family signature 3."
FT   misc_feature    98493..98498
FT                   /note="Duplication due to IS1002 insertion"
FT   repeat_region   98499..98522
FT                   /rpt_type=INVERTED
FT                   /note="Inverted repeat for IS1002 element"
FT   repeat_region   98499..99529
FT                   /note="IS1002 insertion sequence"
FT   CDS             98584..99534
FT                   /transl_table=11
FT                   /locus_tag="BPP0750"
FT                   /product="transposase for IS1002"
FT                   /note="transposase for IS1002 element"
FT                   /db_xref="GOA:Q79GB8"
FT                   /db_xref="InterPro:IPR001584"
FT                   /db_xref="UniProtKB/TrEMBL:Q79GB8"
FT                   /protein_id="CAE40159.1"
FT                   /translation="MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKW
FT                   LARFRSEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSLATVA
FT                   RYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVGHRITGDRAQNRNR
FT                   GIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQATAYYASLGVRIDRVMTDNGSG
FT                   YVSRTFRAVCVELGIRHIRTRPYTPKTNGKAERLVQTCLREWAYARPYTSSAERQAALQ
FT                   PFIDRYNWCRPHSALGHQPPITRIPDVNNLLRIDS"
FT   misc_feature    98965..99501
FT                   /note="HMMPfam hit to PF00665, Integrase core domain, score
FT                   6.8e-30"
FT   repeat_region   complement(99506..99529)
FT                   /rpt_type=INVERTED
FT                   /note="Inverted repeat for IS1002 element"
FT   misc_feature    99530..99535
FT                   /note="Duplication due to IS1002 insertion"
FT   CDS             complement(99531..100424)
FT                   /transl_table=11
FT                   /locus_tag="BPP0751"
FT                   /product="two-component response regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0176"
FT                   /db_xref="GOA:Q7W1E2"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E2"
FT                   /protein_id="CAE40160.1"
FT                   /translation="MRACGLTAPPVRHAFPRARPSVDSEAPLMNSTLDVIFLVRDDAAH
FT                   QKQLEHLAYLGFKIRACTELIEVYDNCAAHACPLVILSAPLADIHIAAARLRAIDRRVG
FT                   IIAMEAFADSESRIRTLLCGADACLPTDVSGLELAAVLQALLRRIVALAPLPETAELAR
FT                   GSEPGIDLGMEALALEPAMAPPDSKWHLTNQGWTLVSPGGSTLGLTTGEREFLSRLMRA
FT                   PERKISREALIADDLSAPGAADQGAQRSRFVDVMISRLRRKAAHHQMPLPIRALHGWGY
FT                   MFAAEVADEAGARGRH"
FT   misc_feature    complement(99585..99815)
FT                   /note="HMMPfam hit to PF00486, Transcriptional regulatory
FT                   protein, C terminal, score 0.00086"
FT   misc_feature    complement(99975..100319)
FT                   /note="HMMPfam hit to PF00072, Response regulator receiver
FT                   domain, score 0.022"
FT   CDS             100653..101180
FT                   /transl_table=11
FT                   /locus_tag="BPP0752"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0177"
FT                   /db_xref="InterPro:IPR005184"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E1"
FT                   /protein_id="CAE40161.1"
FT                   /translation="MPIRPFTRACLVAALGAVLAGCASNTGQAQAEGAAAANAATSADS
FT                   FAQTTWELVRWTKADGGYRVIPHGDNGEPIFLTFFAQGKQYRVSGFAGCNRYTGAYRLR
FT                   DGKLQITAPASTRMACPQPERARLEADYLRALAQIRSFTLDSGGAPRHLTFNVQGGDVL
FT                   DFMRRQDPPTPE"
FT   misc_feature    100653..100745
FT                   /note="Signal peptide predicted for BPP0752 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.807 between residues 31 and 32"
FT   misc_feature    100686..100718
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    100758..101123
FT                   /note="HMMPfam hit to PF03724, Domain of unknown function
FT                   (306), score 5.8e-13"
FT   CDS             101272..102087
FT                   /transl_table=11
FT                   /locus_tag="BPP0753"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0178"
FT                   /db_xref="InterPro:IPR005184"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1E0"
FT                   /protein_id="CAE40162.1"
FT                   /translation="MSAISPGRVALSFSLLLALAACAADPAGGGASRAQAPERHSDMLA
FT                   QTNWELARWTRPGGALRPVPHGGAGKTAPITLSFTHQRGAARLAGFAGCNNYSGQYTIA
FT                   NGLLIVTAPPVSTRMACANADLARLEQDYLAGLTAVTASRLDHDTRPQRLTLALRSGDV
FT                   LDFARRADPLAGGQPGAAKLVYVASSKAPCSAGAGRAQCYQVRDSASQPWQLWYGDITG
FT                   FAFQPGIEYRLRVVEVRDPNPPADASGVRWVLDHVVEQRVAAPRPAPAP"
FT   misc_feature    101272..101340
FT                   /note="Signal peptide predicted for BPP0753 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.771 between residues 23 and 24"
FT   misc_feature    101305..101337
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    101386..101745
FT                   /note="HMMPfam hit to PF03724, Domain of unknown function
FT                   (306), score 2e-14"
FT   CDS             102148..102867
FT                   /transl_table=11
FT                   /locus_tag="BPP0754"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0179"
FT                   /db_xref="InterPro:IPR001763"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1D9"
FT                   /protein_id="CAE40163.1"
FT                   /translation="MTAVVNIAAYKFVSIANPADLREPMLEQAGQRQLKGTVLLAPEGI
FT                   NLFLAGAADAIEGFLRWLRADARFADLQAKYSESARMPFRKLLVKVKREIIRMDHPAIR
FT                   PEAGRAPAVDAATLRRWLAQGRELVMLDTRNAFEVEVGTFRGALDWRIERFTQFPQAVR
FT                   DNQAALAGKTVVSFCMGGIRCEKAAIYMAEAGIEHVYQLEGGILKYFEETDGAGFDGAC
FT                   FVFDERVALDAALAPQA"
FT   CDS             complement(102905..104983)
FT                   /transl_table=11
FT                   /gene="metG"
FT                   /locus_tag="BPP0755"
FT                   /product="methionyl-tRNA synthetase"
FT                   /EC_number="6.1.1.10"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0180"
FT                   /db_xref="GOA:Q7W1D8"
FT                   /db_xref="HSSP:1PFV"
FT                   /db_xref="InterPro:IPR002547"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1D8"
FT                   /protein_id="CAE40164.1"
FT                   /translation="MSRTLFVTTALPYANGSFHIGHIMEYIQADIWVRSMRMAGHTVHF
FT                   VGADDAHGAPIMLKAEKEGITPQALVARYAAERPRYLDGFHIRFDHWHSTDTPENVALS
FT                   QEIYRALKSEGLIETRSIEQFYDPVKGMFLADRYIKGECPRCHAKDQYGDSCEVCGAVY
FT                   APTELINPYSALTGAAPVLKSSDHFFFKLSDPRCVEFLQQWTTGANRQGVKHLQAEVQA
FT                   KTREWLGGDDGEAKLGDWDISRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKSYCAA
FT                   KGLDFDALLDPAGPTEQVHFIGKDIIYFHALFWPAMLKFAGRKTPDQLNVHGFITVSGE
FT                   KMSKSRGTGISPLRYLEIGMDAEWLRYYMAAKLNARVEDMDFNPEDFVARVNSDLVGKY
FT                   VNIASRAAAFITRHFDGELAYDGDTDALAAEFAQQAESIRAAFEAREYNRAVREIMAHA
FT                   DRINQAFDAAQPWVMAKGIGAADAATRARLQDICSRALAGFKALSVMLAPVLPALASRV
FT                   ARELFGANADFAWGDAQQLPQRVAPFKHLMQRVDPKLLDDLFEPPAAEASAPAALPGGE
FT                   ALADTITIDDFAKIDLRIARIVNCEEVEGSTKLLRLTLDVGEGRHRNVFSGIKSAYQPQ
FT                   DLVGKLTVLVANLAPRKMKFGVSEGMVLAASHADEKAEPGIYVLEPWPGAQPGMRVR"
FT   misc_feature    complement(102914..103210)
FT                   /note="HMMPfam hit to PF01588, Putative tRNA binding
FT                   domain, score 4.4e-31"
FT   misc_feature    complement(103829..104980)
FT                   /note="HMMPfam hit to PF00133, tRNA synthetases class I (I,
FT                   L, M and V), score 6.3e-06"
FT   misc_feature    complement(104915..104950)
FT                   /note="PS00178 Aminoacyl-transfer RNA synthetases class-I
FT                   signature."
FT   CDS             complement(105233..105505)
FT                   /transl_table=11
FT                   /locus_tag="BPP0756"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0181"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1D7"
FT                   /protein_id="CAE40165.1"
FT                   /translation="MVNTLFRFFSAALFALLGLIGMMMALVFMASTAIAVGVLYLVAKV
FT                   RGKPFGVRAYWSQRQAARPGPFQAASAPFGQPRGDVIDVEAREMR"
FT   misc_feature    complement(105380..105445)
FT                   /note="1 probable transmembrane helix predicted for BPP0756
FT                   by TMHMM2.0 at aa 20-42"
FT   misc_feature    complement(105401..105505)
FT                   /note="Signal peptide predicted for BPP0756 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.867 between residues 35 and 36"
FT   CDS             105604..106686
FT                   /transl_table=11
FT                   /locus_tag="BPP0757"
FT                   /product="putative iron sulfur binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0182"
FT                   /db_xref="GOA:Q7W1D6"
FT                   /db_xref="InterPro:IPR019591"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1D6"
FT                   /protein_id="CAE40166.1"
FT                   /translation="MMSITIEQIRGALAGVADPQTGLELNVCVKDRDIHLAADPAALTI
FT                   ELGYPAGGVADSVRALAGAALAAAGLGAVRVAVTWNVIAHAVQPGLKPLPQVRNIIAVA
FT                   SGKGGVGKSTTAVNLALAAEGARAGLLDADIYGPSVPAMLGLAGRPESRDNKTMEPLVG
FT                   HGLQANSIGLLIDADAPAIWRGPMVTQALEQLLRQTNWRDLDYLVVDMPPGTGDIALTL
FT                   AQKVPVAGAVIVTTPQDIALLDARKGLRMFQKVHVPILGVVENMAVHICPQCGHAEHIF
FT                   GAGGGRRVAEQYEVPWLGSLPLQRAIREQTDAGNPTVAAEPDGEVAGIYRDIARRVAAR
FT                   IAALPRDMAGKLPAVVVRPA"
FT   misc_feature    105919..105942
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    106204..106254
FT                   /note="PS01215 Mrp family signature."
FT   CDS             106690..108594
FT                   /transl_table=11
FT                   /locus_tag="BPP0758"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0183"
FT                   /db_xref="GOA:Q7W1D5"
FT                   /db_xref="InterPro:IPR019825"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1D5"
FT                   /protein_id="CAE40167.1"
FT                   /translation="MHRILRVCPALLFALAAGQVHAKLPEVIVDPGGVPPAALQAINSA
FT                   VDAIARLSEDQDGGEIDRLRRRARDATLAALATQGYFTPTVTLTPGTDVGGETWDIAIE
FT                   PGPRARVASVDLKFTGRVARPEYAARIQKWRDDWALKAGQPFINGDWNKAKSGLLDAVS
FT                   TRDFLLAHMTHSLAEVDAETAQVRLSVEIDSGPAVRMGALQTDGLQRVPESLVRRYVKY
FT                   SEGAAYDQDKLDQWQQELQSTAFFRGAFVTLDQGARGGQDDVKVTAPGAGARAPGSSGL
FT                   ASVAPAGDAEVAGGPTAAAPVLDSQGEITLPVDVRVVEAPPKRLAVSLGVDDEAGVRFE
FT                   TIYRQNVVFGQPVTMETGLGVDRLRQRAYLDFNLPPDERGRKDSFGLLFDHSDVQGLDV
FT                   TRYALGVTRLQERKGAGDSRVEYETRWGGLLAHDHVKIDGGDEYDLPTATLTAEWLRRD
FT                   VNSKYDPREGNLIAVGGGVGATLDDGQPYMRLRLRGQKWWPIGKLDVLTLRGEVGRLWS
FT                   NGRTRVPDDFGFRTGGARSIRGYRYQSIGVEQDDAIVGAPTLAVASVEYDHYFNERWGI
FT                   GVFVDAGDAAESFGDMDIAVGYGVGARVRTPAGPLFLDVAYGQRERDLRLHFSLGIAF"
FT   misc_feature    106690..106755
FT                   /note="Signal peptide predicted for BPP0758 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 22 and 23"
FT   CDS             108591..112229
FT                   /transl_table=11
FT                   /locus_tag="BPP0759"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0184"
FT                   /db_xref="InterPro:IPR007452"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1D4"
FT                   /protein_id="CAE40168.1"
FT                   /translation="MSKIWGVVRHILVWWVPGVAMLAALACGFVFWTVASQNGTRLLLD
FT                   TVARQLDGEIAGVRGSVLRGLRVDRIRLSVADVDVAVDDLRLDVAWRALGQRLLHVREL
FT                   AATRVEVGLHTPATPPPDSDEPFALRLPVELALDRLSLGEFVLRQDGEPLPVSAGELQA
FT                   SLAAGRHGARLTLDSLRVTHAVGTLRAQGRLDVASLAQPWPLTASLDLQAQGSGPESPL
FT                   CLAPLLDARDKTAKDKAAKDKGKDKGKDKGKDKGKDDAGEKPDEPADPCGLALQVQAQG
FT                   TLEQLEAELTGAGQGLALEARAGLLPQAPFPLRTASLKLTREDKSSLAATLDWQPQPGQ
FT                   PGRDRVVATFEAERLDLQRLAGEAIPPAMLSARGGLDAEVDDLSRLHRATLTLDVTKGS
FT                   SWNRHPLAGKVAASVSALGDPPGAFATAAPAQPHALPGRLRVDQLDVDLQLGPNRVRAQ
FT                   GKLDERAGALKLDAQAPRLDAFWPGIPGAASVKAALDGALARHRGRIEAAYTPADARAR
FT                   VLGRARAQAQLEFSGGWGAGPAAEGAAAGWRGSVSRLTADSAGFALALERPVTLAYVPE
FT                   ALAPQWQWQVGATTLALTFPDKQRVALAHAASRGGAGRWETAGRADALVITAAMVRQIL
FT                   VALDPEAVARAERDSGSPVNAPVPAAQRRISLDASWDLKFAGALAGKVRVARRDGDLRI
FT                   PGDPPIPLGLRTLVLEANATPTGGQASRLDARLDMATARMGAINGTASATLGGLALDPR
FT                   QPIRVALDADVTDLAWLGLFVGDTLEVGGMLKANVRAQGSLDGKWNASGTVNGDKLRVV
FT                   RIDDGVRLIDGTLRARLQDDRVILDSLRFPASLRVMPAEWRTREWVSTNPDAKGGYLEA
FT                   TGQWELSAARGQVRLQLHRFPALQRSDRYGMVSGVVTLDAALPRISINGDITADAGWVS
FT                   LEILQGVLTLDDDVKVVRAGQKNAQGDGPPLQIDMNLKVDMGPRFYITGMGLDAGLLGS
FT                   IQIRLQEGRLTGYGALRTRGGGIEAYGQKLRLRRGTLTFQGRLDNPLLDIEALRTGEQV
FT                   EAGVRVAGTAQRPRIDLVSYPDVSDVEKLSWLVLGRGPDASGGDTALLLSVGTALLGGG
FT                   QPFYKQFGLDDVSVRSGAIGSSGSLLPDRTVAAGVNRDSDADLATQFLVASKRFANGIT
FT                   LSVEQALAGSETVGRASYRLARGLSLDLKAGSVNGIALVYRILLDD"
FT   misc_feature    108591..108668
FT                   /note="Signal peptide predicted for BPP0759 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.928) with cleavage site
FT                   probability 0.359 between residues 26 and 27"
FT   misc_feature    108624..108692
FT                   /note="1 probable transmembrane helix predicted for BPP0759
FT                   by TMHMM2.0 at aa 12-34"
FT   misc_feature    108639..108671
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             112290..112853
FT                   /transl_table=11
FT                   /gene="dcd"
FT                   /gene_synonym="dus"
FT                   /gene_synonym="paxA"
FT                   /locus_tag="BPP0760"
FT                   /product="deoxycytidine triphosphate deaminase"
FT                   /EC_number="3.5.4.13"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0185"
FT                   /db_xref="GOA:Q7W1D3"
FT                   /db_xref="InterPro:IPR011962"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1D3"
FT                   /protein_id="CAE40169.1"
FT                   /translation="MSIKSDRWIRRAAEAGMIEPFEPGQVRTAGGNRIVSYGTSSYGYD
FT                   VRCADEFKIFTNINSTIVDPKQFDEKSFVDFKGDVCIIPPNSFALARTVEYFRIPRSVL
FT                   TICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPAKIYAGEGCAQMLFLESDE
FT                   VCETSYRDRGGKYQGQRGVTLPRT"
FT   misc_feature    112461..112847
FT                   /note="HMMPfam hit to PF00692, dUTPase, score 0.0031"
FT   CDS             complement(112861..113283)
FT                   /transl_table=11
FT                   /locus_tag="BPP0761"
FT                   /product="conseved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0186"
FT                   /db_xref="InterPro:IPR004360"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1D2"
FT                   /protein_id="CAE40170.1"
FT                   /translation="MPAPATVASPVVTCLRYRNASAAIEWLVHAFGFEAQRIVPGPADT
FT                   IVHAQLTLGSGMIMLASVTDTPFSRYMKQPDEVGGVETQSVYLVVADPDQAYRDAQAAG
FT                   AEILIDIADADYGGRGFSCRDPEGHIWSVGSYDPWQ"
FT   CDS             complement(113311..113730)
FT                   /transl_table=11
FT                   /locus_tag="BPP0762"
FT                   /product="putative lyase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0187"
FT                   /db_xref="GOA:Q7W1D1"
FT                   /db_xref="InterPro:IPR004360"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1D1"
FT                   /protein_id="CAE40171.1"
FT                   /translation="MQAQVLINIDVPDAARAALFYERAFGLRPQRRLGPQAIEMAGAAV
FT                   PFYLLEKATGSQAATGTSQGRDYARHWTPVHLDFVVDDCDRAVATAVAAGAMLEDPPHS
FT                   HAWGRIAHLSDPYGNGVCILQFLGEGYDALAAAAP"
FT   CDS             complement(113759..114277)
FT                   /transl_table=11
FT                   /locus_tag="BPP0763"
FT                   /product="putative acetyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0188"
FT                   /db_xref="GOA:Q7W1D0"
FT                   /db_xref="HSSP:1P0H"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1D0"
FT                   /protein_id="CAE40172.1"
FT                   /translation="MNLSTIRPLTPEDAAEFQRVRLAALREAPEAFGSSYEEESVDTIA
FT                   QWRARLAPREGYVLLGAFVDGALAGVGGVARGHTMKQRHKAEIWGIYVVPAQRRGGLAR
FT                   QLTEALLARAARMTGVRHVLLSVGADNGAAHALYASLGFAEYGREPDAMLVGGRLLANI
FT                   LMIRPLAAR"
FT   misc_feature    complement(113846..114100)
FT                   /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT)
FT                   family, score 3.5e-14"
FT   CDS             join(114330..114545,114549..114827)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0764"
FT                   /product="hypothetical protein (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0189"
FT                   /db_xref="PSEUDO:CAE40173.1"
FT   variation       114546..114548
FT                   /note="In-frame TAG stop codon in parapertussis; CAG in
FT                   pertussis"
FT   CDS             114982..117252
FT                   /transl_table=11
FT                   /locus_tag="BPP0765"
FT                   /product="probable orn/arg/lys decarboxylase"
FT                   /EC_number="4.1.1.19"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0190"
FT                   /db_xref="GOA:Q7W1C9"
FT                   /db_xref="HSSP:1C4K"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1C9"
FT                   /protein_id="CAE40174.1"
FT                   /translation="MKFRFPIFIIDEDYRSENASGLGIRALASAIEAEGVEVIGVTSYG
FT                   DLSSFAQQQSRASAFILSIDDEEFDVDSPEDVAGAIKNLRTFIGELRFRNADIPIYLYG
FT                   ETRTSEHIPNDILRELHGFIHMFEDTPEFVARHIIREARSYVDGLLPPFFRELVKYAQD
FT                   GSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAESE
FT                   LNAARIFHADHCFFVTNGTSTSNKVVWHANVAAGDVVVVDRNCHKSILHAITMTGAIPV
FT                   FLRPTRNHLGIIGPIPLDEFDPENIRRKIEANPFAREALNKKPRILTLTQSTYDGVIYN
FT                   VEMIKEKLGTYVDTLHFDEAWLPHAAFHEYYRDMHAIGPDRPRSQDAMVFATHSTHKLL
FT                   AGISQASQIIVQESESRKLDRNLFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTAL
FT                   VEESIREAMDFRRAMRKVASEFGKDDWWFKVWGPNRLAPEGIGHRDDWVLESGDHWHGF
FT                   GDLAPGFNMLDPIKATIITPGLDMSGSFGESGIPAALVSKYLAEHGVVVEKTGLYSFFI
FT                   LFTIGITKGRWNTLLTALQQFKDDYDRNQPLWRILPEFCRGHRRYERMGLRDLCQQIHE
FT                   AYRERDVARLTTEMYLSDMVPALKPSDAFARMAHREVERVEIDQLEGRVTGVLLTPYPP
FT                   GIPLLIPGERFNRTIVQYLQFAREFNERFPGFETYIHGLADEEGPDGAKRYYVDCLKDA
FT                   GEQ"
FT   misc_feature    115432..116790
FT                   /note="HMMPfam hit to PF01276, Orn/Lys/Arg decarboxylase,
FT                   major domain, score 3e-185"
FT   misc_feature    116155..116199
FT                   /note="PS00703 Orn/Lys/Arg decarboxylases family 1
FT                   pyridoxal-P attachment site."
FT   misc_feature    116812..117204
FT                   /note="HMMPfam hit to PF03711, Orn/Lys/Arg decarboxylase,
FT                   C-terminal domain, score 4.3e-30"
FT   CDS             117301..118533
FT                   /transl_table=11
FT                   /locus_tag="BPP0766"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0191"
FT                   /db_xref="InterPro:IPR004792"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1C8"
FT                   /protein_id="CAE40175.1"
FT                   /translation="MSSREYPVSMFDVAVIGAGAAGMMCAAVAGQRGLRVVLIDHAAKL
FT                   AEKIRISGGGRCNFTNLGAGPANFLSDNPHFCRSALAGYTPQDFLGLLRRHRVHWHEKH
FT                   RGQLFCDDSSETIIEVLRAECGQGGVAWRMPCRVDEIARREGGGFTLRTSTGAIDARAV
FT                   VVATGGMAIPQLGATDYALKVARQFGLKVVEPRPALVPLTFDPAQWQPFAALSGVALEV
FT                   TLSTGQGKGRAAFLEDLLFTHRGLSGPAILQISSYWKPGEAIVLDLAPGRDLAAELIGA
FT                   KPGNRQQLHTVLAGLWPRRLADTWLDVAGRAVGADLAAARLADVPDRTLRALAALIHDW
FT                   RLVPSGTAGYKKAEVMRGGVDTRALDQKSMQARGVPGLYFIGEAVDVTGWLGGYNFQWA
FT                   WASGYACGNAL"
FT   misc_feature    117301..117387
FT                   /note="Signal peptide predicted for BPP0766 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.778) with cleavage site
FT                   probability 0.687 between residues 29 and 30"
FT   misc_feature    117337..117390
FT                   /note="1 probable transmembrane helix predicted for BPP0766
FT                   by TMHMM2.0 at aa 13-30"
FT   misc_feature    117463..118512
FT                   /note="HMMPfam hit to PF03486, HI0933-like protein, score
FT                   1.7e-130"
FT   CDS             118579..119271
FT                   /transl_table=11
FT                   /gene="sodA"
FT                   /locus_tag="BPP0767"
FT                   /product="superoxide dismutase [Mn]"
FT                   /EC_number="1.15.1.1"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0193"
FT                   /db_xref="GOA:Q7W1C7"
FT                   /db_xref="HSSP:1IX9"
FT                   /db_xref="InterPro:IPR019833"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1C7"
FT                   /protein_id="CAE40176.1"
FT                   /translation="MVNGNDYHLSLPNANAGDRMPYVLPALSYAYDALEPHIDARTMEI
FT                   HHTRHHQTYVNGLNAALEGAGLDSEEPVEQLLRRIPALPPGIHGAVRNHGGGHANHSLF
FT                   WTVMSPSGGGRPDGRLAADIQAQLGGHDAFQAAFTQAALGRFGSGWAWLTVTPAGRLRV
FT                   DSSANQDSPLMEGNTPILGLDVWEHAYYLQYQNRRPEYIEAFYRVVDWAEVARRYEIAL
FT                   AELGREAA"
FT   misc_feature    118636..118905
FT                   /note="HMMPfam hit to PF00081, Iron/manganese superoxide
FT                   dismutases, alpha-hairpin domain, score 7.1e-44"
FT   misc_feature    118915..119247
FT                   /note="HMMPfam hit to PF02777, Iron/manganese superoxide
FT                   dismutases, C-terminal domain, score 4.7e-61"
FT   misc_feature    119128..119151
FT                   /note="PS00088 Manganese and iron superoxide dismutases
FT                   signature."
FT   CDS             join(119268..119828,119834..120166)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0768"
FT                   /product="probable metal transporter (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0194"
FT                   /db_xref="PSEUDO:CAE40177.1"
FT   misc_feature    119268..119354
FT                   /note="Signal peptide predicted for BPP0768 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.982) with cleavage site
FT                   probability 0.671 between residues 29 and 30"
FT   misc_feature    join(119304..119372,119400..119468,119505..119573,
FT                   119586..119654,119733..119801,119829..119897,
FT                   119916..119984,119997..120065,120084..120143)
FT                   /note="9 probable transmembrane helices predicted for
FT                   BPP0768 by TMHMM2.0 at aa 13-35, 45-67, 80-102, 107-129,
FT                   156-178, 188-210, 217-239, 244-266 and 273-292"
FT   misc_feature    join(119715..119828,119834..120151)
FT                   /note="HMMPfam hit to PF02535, ZIP Zinc transporter, score
FT                   4e-25"
FT   variation       119817..119831
FT                   /note="(CGCGG)3 in parapertussis; (CGCGG2) in pertussis"
FT   CDS             120561..121661
FT                   /transl_table=11
FT                   /gene="gcvT"
FT                   /locus_tag="BPP0769"
FT                   /product="glycine cleavage system T protein"
FT                   /EC_number="2.1.2.10"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0195"
FT                   /db_xref="GOA:Q7W1C6"
FT                   /db_xref="InterPro:IPR006223"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1C6"
FT                   /protein_id="CAE40178.1"
FT                   /translation="MSAPLKRTPLAEEHLAAGARMVDFGGWDMPLAYGSQLEEHHAVRQ
FT                   DAGMFDVSHMLNVDVGGADATAFLRRLVANDVARLATPGRALYSCMLNPQGGIIDDLII
FT                   YYFAPDQWRVVVNAGTADKDIAWMQRVAAADGFDVAIAPRRDLAMVAVQGPNARAKVWA
FT                   ARPAWQAASEPLAPFSAAAVEAGTLVARTGYTGEDGFEIVLPADAVVQLWRDLLAQGVR
FT                   PCGLGARDTLRLEAGMNLYGQDMDELVHPDQAGLSWTVALKDEARRFVGRDAIEQFAVP
FT                   RAFVGLKLQERGVMRAHMPVRCAQGMGELTSGTMSPTLGVSVGFARVPVGVQPGDAVEV
FT                   EIRGKWVPALVCKLPFVRHGKAVEHS"
FT   misc_feature    120705..121637
FT                   /note="HMMPfam hit to PF01571, Glycine cleavage T-protein
FT                   (aminomethyl transferase), score 1.3e-117"
FT   CDS             121806..122117
FT                   /transl_table=11
FT                   /gene="gcvH"
FT                   /locus_tag="BPP0770"
FT                   /product="glycine cleavage system H protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0196"
FT                   /db_xref="GOA:Q7W1C5"
FT                   /db_xref="HSSP:1HTP"
FT                   /db_xref="InterPro:IPR003016"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1C5"
FT                   /protein_id="CAE40179.1"
FT                   /translation="MFVVGITDNAQEQLGDLVFVGDVKVGATLKAGETAGVVESVKAAS
FT                   DIYAPVDGEIVAFNDELEANPSLINESAYTAWIFKIKPANAADLDKLLDAAGYQAVAG"
FT   misc_feature    121806..122111
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF01597, Glycine cleavage H-protein,
FT                   score 2.8e-27"
FT   CDS             122177..125041
FT                   /transl_table=11
FT                   /gene="gcvP"
FT                   /locus_tag="BPP0771"
FT                   /product="glycine cleavage system P protein"
FT                   /EC_number="1.4.4.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0197"
FT                   /db_xref="GOA:Q7W1C4"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1C4"
FT                   /protein_id="CAE40180.1"
FT                   /translation="MSRAPDTHSDFIPRHIGPSDEDQATMLAAIGAASLDALIDEVVPP
FT                   RIRSRAPLALPAARSETDVLQDLKRMAARNQIYRNYIGQGYYGTHTPNVVLRNVLENPA
FT                   WYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSR
FT                   SSSPVFFVSQHCHPQTLEVVRTRAEGLGIELVIGDESRGLPECFGVLLQYPHSLGGVAD
FT                   YRELAQAAHAQGAVVACVTDLLALALIEPPGQWGADIAVGSAQRFGVPFGFGGPHAGFM
FT                   ACRDAYKRNMPGRLVGVSKDAQGNPALRLALQTREQHIRREKATSNICTAQVLLAVMAG
FT                   LYAVWHGPRGVRRIAERVQSLTGALRAALAGLGVKVANDTWFDTLLLETGVATPAILAA
FT                   ADCARTNLRQVDGARLAVSLDETVTLADLQALVNVFAAGLGKDEVALPAPQASLDGIPA
FT                   AVRRQGPILSHPVFSSVQSETDMLRYLRKLADKDLALDRTMIPLGSCTMKLNATAEMIP
FT                   ITWPEFALIHPFAPASQTPGYRELIDGLSAQLCEITGYDGISLQPNSGAQGEYAGLLAI
FT                   RAYHQANGQPQRNVCLIPASAHGTNPASAQLAGMDVVVVASDANGNVDLADLRARIAQV
FT                   GERLAALMITYPSTHGVFEEAVTEICDAVHEAGGQVYLDGANMNAMVGVAQPGKFGSDV
FT                   SHLNLHKTFCIPHGGGGPGVGPVAVRAHLAPYLPGVLDAQGRLDPEAKVGPVSAAPYGS
FT                   AGILPIPYVYIALMGAEGLRRATEVAILNANYIAARLRDHYPVLYAGRNGRVAHECILD
FT                   VRPLKETSGISAEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEGLAELERFIEAMIA
FT                   IRAEIAQIESGERDRDDNVLRNAPHTAQMLLAEEWHHDYPRQQAAYPVASLRENKYWPP
FT                   VARVDNAYGDRNLVCACLPVEAYA"
FT   misc_feature    122213..123481
FT                   /note="HMMPfam hit to PF02347, Glycine cleavage system
FT                   P-protein, score 1.8e-247"
FT   CDS             complement(125501..126286)
FT                   /transl_table=11
FT                   /locus_tag="BPP0772"
FT                   /product="putative GntR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0198"
FT                   /db_xref="GOA:Q7W1C3"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1C3"
FT                   /protein_id="CAE40181.1"
FT                   /translation="MTIIWITKRCTMAAAMKTVETNPNPLGPIKAVRSRDLLADALREQ
FT                   ILSGARPSGVALPSERELTEETGLSRAAVRDALRVLESEGLIETRQGRYGGSVVKLPAN
FT                   DALARPVALFARARGISLQEMIEARVAIEPTIAELAALRRTPEDLQALIQATDLLQEAL
FT                   PRVEQFLDLNVRWYFALADACHNDLLRAFIVSIAGLILAATSREGQTPEPTRRLILQSH
FT                   RRVVDAVIAGDAPAARRRMERHVAGYQEHYERLGLTPSA"
FT   misc_feature    complement(125990..126175)
FT                   /note="HMMPfam hit to PF00392, Bacterial regulatory
FT                   proteins, gntR family, score 1.2e-11"
FT   CDS             126311..127522
FT                   /transl_table=11
FT                   /locus_tag="BPP0773"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0199"
FT                   /db_xref="GOA:Q7W1C2"
FT                   /db_xref="HSSP:1PQY"
FT                   /db_xref="InterPro:IPR003673"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1C2"
FT                   /protein_id="CAE40182.1"
FT                   /translation="MAAVSSSVPPTPLGGVRVLDLSKVLAGPLCTQYMADMGADVIKVE
FT                   AAGQGDDTRGWPPFQDGQAAVFLSCNRNKRSIALDLKSAHGRAVVQRLAAWADVVVHSF
FT                   GPGVAQKLGVDWEALSEINPRLVYCAISGFGPVGSLSHGKGFDVVLQAFCGMISITGET
FT                   EGGAVRSPFSPVDQATGLHALIGILAALRQRDASGRGVTVDASLFDTALGFMGYFMQGY
FT                   WARGTEPARAGAGHESLCPYQDFATADKPIILGIANDALWRAFCTLAGRPELVSDPRFA
FT                   TNAQRVANRAQTLAATRELLAARTRGEWLPALEQAGIPCSPIHTLAEVDAHPHTRESGM
FT                   VFDYPETGADTGPLKGVAQPVRFDGMRLTTPKRPPSLNQDWASVLADAGYSDPEVRDLL
FT                   QQMA"
FT   misc_feature    126539..127105
FT                   /note="HMMPfam hit to PF02515, CAIB/BAIF family, score
FT                   6.3e-63"
FT   CDS             127551..128519
FT                   /transl_table=11
FT                   /locus_tag="BPP0774"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0200"
FT                   /db_xref="GOA:Q7W1C1"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1C1"
FT                   /protein_id="CAE40183.1"
FT                   /translation="MMNVLIRRALCAAIASLAAAAAHAAYPEQPVRIVVAFAPGSGTDN
FT                   VARYYATRLSEELKQPFVVENKPGANGSIAATQVARTQPDGYTLFLGSNSTLSAAPFLF
FT                   KKLPYEPLKDFTAVARLSDIPSMLVVGADSPIRDFDQFIGKARAEPGRVTWANANTAHL
FT                   AAGMALTKQAQLDMISVPYKSSPQALTDVIGGQVTAMVVDTSAGTAFVQQGKVRALAVT
FT                   TARPVAAMPGVPSMSERFPGIDVYSWLGIVGPAGMPDEVVSVVNQAILKINASEDTVRF
FT                   LRENAGAEPPPSSSPAEFTQFMHAQLEVWRKLLRDANVEPM"
FT   misc_feature    127551..127622
FT                   /note="Signal peptide predicted for BPP0774 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.998 between residues 24 and 25"
FT   misc_feature    127686..128507
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 1.2e-72"
FT   CDS             128516..129349
FT                   /transl_table=11
FT                   /locus_tag="BPP0775"
FT                   /product="probable enoyl-CoA hydratase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0201"
FT                   /db_xref="GOA:Q7W1C0"
FT                   /db_xref="InterPro:IPR018376"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1C0"
FT                   /protein_id="CAE40184.1"
FT                   /translation="MSQQESRMSAPACVSEFVRYDVDAGVARITLDRPDRRNAIDVPMR
FT                   AALLAAVQAATADPAVRAVVLTGAGGHFCSGGDVSTMRGASMSAEQGRDRMAPIGACAR
FT                   ALLEMPKPVIAAVDGIAFGGGFGLCLCADLVLATPAARFCLSFMRIGLVPDFAAAFTLP
FT                   RLVGLQRARQLIYTAAEIDGRQALEYGLVSELVDAGRLAPRAAEVATAMAGMPATAFAL
FT                   TKQALLRSSSSELAAMVEMEMTSQGVAFNTGYHQQAVERLLEKKPPLYSFPAPTA"
FT   misc_feature    128594..129106
FT                   /note="HMMPfam hit to PF00378, Enoyl-CoA
FT                   hydratase/isomerase family, score 6.8e-45"
FT   misc_feature    128855..128917
FT                   /note="PS00166 Enoyl-CoA hydratase/isomerase signature."
FT   CDS             complement(129400..131424)
FT                   /transl_table=11
FT                   /locus_tag="BPP0776"
FT                   /product="putative exported protein"
FT                   /note="Similar to Yersinia pestis putative exported protein
FT                   Ypo2262 SWALL:Q8ZEB8 (EMBL:AJ414151) (514 aa) fasta scores:
FT                   E(): 5.1e-35, 26.56% id in 527 aa, and to Escherichia coli
FT                   O157:H7 hypothetical protein YdgA or Z2617 or Ecs2320
FT                   SWALL:Q8X676 (EMBL:AE005385) (502 aa) fasta scores: E():
FT                   2.5e-33, 26.78% id in 489 aa"
FT                   /db_xref="InterPro:IPR010352"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B9"
FT                   /protein_id="CAE40185.1"
FT                   /translation="MKKSIGITAGVIVVLAGGWLGGTWYTGKRIETETQQRLGVLNEKL
FT                   AAVVPGYTLRVDQLKYERGFFTTQARYGLSLSQDIKEESGTVTPLPLGSTEFDARFEHG
FT                   PFPRSALASGQFLPQMAFVHAELARTELVKPLFELTKNAAPLWSDTIVSYSGNASTRSG
FT                   LAPIDFTEDDVTLSFSGATLTSTFQRATRSGTARLDAEYVRFTADGDQDTQMSATGWSV
FT                   DMRSHQGKHGFTLGESTMAIKRIAMIDKRESLDISLDDLSYRALATEDGDYIDIEAAYK
FT                   TGPLTVNKIPFGSGELNVKVSRLDGQALKALSDGYNQLLRGYFATGETDEGLKDEQLTM
FT                   LIENGGRLLAGGPSLSLGPVAWRTEKGESSLMSSIVLVKPATTSGELTPREYLEEAVKA
FT                   IDVKMVVSKPMVRDLAIHYETSQGKTPEEAAKEADETIDAFAGMAEILNIGRNDGDKLV
FT                   GTFTYAAGVAKLNGRDVPVNELFDNLYDSASASLDDDEHNHEDDAAMSAEAASEAVEAA
FT                   AEAAAAEAAQEAADAAAWATEGDSLRSVNAGLLTSILAEGGYDSTTEEGASGPVIVIDA
FT                   NGLPLRDLRAELYCIDDDECMDVSMKASFGKRKTSLKALNAWNQKYRWTRAYLDDDNQA
FT                   VLRMDLSAEGGVGRENLSIMVNTFMQMVGNFEDEVYAAR"
FT   misc_feature    complement(131344..131409)
FT                   /note="1 probable transmembrane helix predicted for BPP0776
FT                   by TMHMM2.0 at aa 5-27"
FT   misc_feature    complement(131377..131424)
FT                   /note="Signal peptide predicted for BPP0776 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.721) with cleavage site
FT                   probability 0.681 between residues 16 and 17"
FT   CDS             complement(131552..133000)
FT                   /transl_table=11
FT                   /locus_tag="BPP0777"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Yersinia pestis putative exported protein
FT                   Ypo2262 SWALL:Q8ZEB8 (EMBL:AJ414151) (514 aa) fasta scores:
FT                   E(): 8.7e-44, 32.04% id in 490 aa, and to Escherichia coli
FT                   O157:H7 orf, hypothetical protein YdgA or Z2617 or Ecs2320
FT                   SWALL:Q8X676 (EMBL:AE005385) (502 aa) fasta scores: E():
FT                   9.9e-35, 29.26% id in 492 aa"
FT                   /db_xref="InterPro:IPR010352"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B8"
FT                   /protein_id="CAE40186.1"
FT                   /translation="MKKSVAVTTGVIIVAVGGWLAGTWYTGQRIETESQTRLNEINAQL
FT                   AAAFPEFPVRINQLKLERGFFTSQARYGVEVGKSEETGKPEATVEVDARIEHGPFAPGA
FT                   LARGKLMPQLAFVHAEVANTEDLKKVFEVTKGATPLWSDTVVAYNGDSTSTGGLAAIDY
FT                   SGDEGKFAFSGATFDGSYQRATQAAIGSLKADSLALDASADDDGGPLLFTLDGLAVTVD
FT                   SRMGKSGLSIGDSALSVKRLEVKQPEGDAHLTVADMAYAARIGEQDEFINGEISYGAGE
FT                   ITYNGIALGNGRAVFKAERLNAAAIKVVADEYNKAIKLQAEGKDPVPDNAEMRKLLMAQ
FT                   ADTLLAGKPVLTLDPVQWKTAQGESVFNARVALSKPASSDLMAVDYFSQAIESIDASAT
FT                   LSKPMIKALMVGYLQSQEGMDAQQAAAAADQQVSSLAGMAEMMNLGKNEGDNIVSKFHY
FT                   AAGTVDLNGRKMPADQLLGSILGG"
FT   misc_feature    complement(132920..132985)
FT                   /note="1 probable transmembrane helix predicted for BPP0777
FT                   by TMHMM2.0 at aa 5-27"
FT   CDS             complement(133176..134651)
FT                   /transl_table=11
FT                   /locus_tag="BPP0778"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3163"
FT                   /db_xref="InterPro:IPR019825"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B7"
FT                   /protein_id="CAE40187.1"
FT                   /translation="MRWLLAMIKHETNTVSPVPTPLERFFRGSPEILAGERAIRAYENT
FT                   DSGLGGYIEVARREGAEIVVPVAAESWPSAPTDRATYERLCGLVLDEARRGGFDAILLD
FT                   LHGAMVAEGVEDAEGDLLRRLRDIAPAIPVGVTLDMHANIYDDIVRHATVISGFHTYPH
FT                   VDIRAAGLRAANAIARTLRGEIKPVMSWANKPMLPHIMRQGTHAEPNKSLQARCKALES
FT                   EGVIAASVFVGFPHADIREAGLSAVVCTDANLAQAEQYRDELLETAWRGRADWVFHAEP
FT                   LAPTIARAKAIENGPVVLLDHYDNTGSGGTMDTTAVLAEILDQGLENVAFYAICDPQAA
FT                   QQAAAAGVGATVTLPLGGKVAMPALRQASPPLHLTARVKLLFDGVYLNRGPMYRGVRND
FT                   TGLTVVLDTGKVEIVVVSRHQEPFDINCLLSAGIDPLQKRYVALKSRVHWRAGFADMAT
FT                   HVIECTGVGVTTSDYGQVEFRHVRRPVYPLDAI"
FT   misc_feature    complement(133428..133448)
FT                   /note="PS00307 Legume lectins beta-chain signature."
FT   CDS             complement(134695..136353)
FT                   /transl_table=11
FT                   /locus_tag="BPP0779"
FT                   /product="putative ABC transpoter ATP-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3162"
FT                   /db_xref="GOA:Q7W1B6"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B6"
FT                   /protein_id="CAE40188.1"
FT                   /translation="MPYAPYPPAGDTSAAVLAIRNLSVSVCGAGNRVVRNLSLDVHAGE
FT                   TVCVVGESGSGKSVTSLAVMGLLPEGILEVSGGSARVLGEDIVTASARRRRELRATRMA
FT                   MVFQEPMTALNPVHRVGSQVDEVLRLHRRMPRAQRRAKVLEMFRSVHLPDVERIYDAYP
FT                   HQLSGGQRQRIVIAMALILEPKLLIADEPTTALDVTTQKQILALIRELQDRHQTAVLFI
FT                   THDFGVVAEIADRIVVMNRSDLTEAGTRDEILARPSQNYTRRLVSSVPSLVPTQREAPG
FT                   GEPVLRITGLGRTYAERRSLFGATRTVVAASEVDLTLRRGEILGIVGESGSGKSTVARC
FT                   IVRLIEPSAGRMLLGETDIARLSGAGLRPLRRKVQIVFQDPYRSLNPRRAVGESIIEGL
FT                   LNFGMPRAQALVRAARTLGVVGLGPDVMRRYPHQFSGGQRQRLCIARALVMDPEVLVAD
FT                   EAVSALDVSVQAQVLELIEQVRERTGVSVLFITHDLRVAAQVCDTIAVMQHGKVVETGA
FT                   AQTVLTRPGHAYTRALIDAAPGRGWDFRNFRPLPA"
FT   misc_feature    complement(134824..135393)
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   3.9e-65"
FT   misc_feature    complement(135010..135054)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(135349..135372)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    complement(135628..136224)
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   1.9e-58"
FT   misc_feature    complement(135814..135858)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(136180..136203)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(136357..137256)
FT                   /transl_table=11
FT                   /locus_tag="BPP0780"
FT                   /product="putative peptide ABC transporter permease
FT                   protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3161"
FT                   /db_xref="GOA:Q7W1B5"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B5"
FT                   /protein_id="CAE40189.1"
FT                   /translation="MPTHSDAVADGALPENEPPQAGAWRRVRREFSGAPVLAALAVLAL
FT                   VVGAALLAPWLGTVDPTAIDPGARLKPPFGDYLFGTDAFGRDIWSRVVYGARVSLVAGL
FT                   GAALVSVTLGLVIGVIAGWFRTLDGLIMRTMDAVMAIPGILLAIALVSVTGASLATVLV
FT                   AITIPEIPRVVRLVRGQILSVRGEPYVEAALALGTPLPLLLWRHLVPSTVAPLTVQGTY
FT                   VFASAMLTEAILSFLGAGIPPEIASWGNIMSEGRMYFRMLPGLILFPGLFLSLTVLSVN
FT                   ILGDALRDALDPKMTRRT"
FT   misc_feature    complement(join(136408..136473,136534..136590,
FT                   136630..136695,136756..136821,136885..136950,
FT                   137089..137154))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BPP0780 by TMHMM2.0 at aa 34-56, 102-124, 145-167, 187-209,
FT                   222-241 and 261-283"
FT   misc_feature    complement(136486..136716)
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 0.0033"
FT   misc_feature    complement(136627..136713)
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   CDS             complement(137259..138200)
FT                   /transl_table=11
FT                   /locus_tag="BPP0781"
FT                   /product="putative ABC transporter permease protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3160"
FT                   /db_xref="GOA:Q7W1B4"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B4"
FT                   /protein_id="CAE40190.1"
FT                   /translation="MLAFIARRLLATIPVLIMVAVVVFAILRASPGDPAIIMAGDAATP
FT                   ERIAQIRHVMGLDQPLVKQFFIWTGRLVRGDMGTSLMSGVPVTQLIGQRLEPSLSLAVI
FT                   TLAFTLAVAIPLGILAAWRRGRLLGRAVMGFSVLGFSVPVFVTGYVLIWAFAIKLGWFN
FT                   VQGYTPLAQGFWPYLHRLVLPSLALSTVYVALIARITRTSIIEVMGEDFIRTARAKGLG
FT                   ETGVLLGHALRNAAVPIATVIGVGVALLISGVVVTESVFNIPGLGRLVVEAVMARDYPV
FT                   IQGLTLFFAFVYVFINLVVDCAYTVFDPRIRY"
FT   misc_feature    complement(join(137280..137345,137430..137495,
FT                   137604..137669,137730..137795,137835..137900,
FT                   138108..138173))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BPP0781 by TMHMM2.0 at aa 9-31, 100-122, 135-157, 177-199,
FT                   235-257 and 285-307"
FT   misc_feature    complement(137376..137591)
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 0.031"
FT   misc_feature    complement(137502..137588)
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   misc_feature    complement(138072..138131)
FT                   /note="PS00187 Thiamine pyrophosphate enzymes signature."
FT   misc_feature    complement(138126..138200)
FT                   /note="Signal peptide predicted for BPP0781 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.916) with cleavage site
FT                   probability 0.462 between residues 25 and 26"
FT   CDS             complement(138246..139811)
FT                   /transl_table=11
FT                   /locus_tag="BPP0782"
FT                   /product="putative extracellular solute-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3159"
FT                   /db_xref="GOA:Q7W1B3"
FT                   /db_xref="InterPro:IPR000914"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B3"
FT                   /protein_id="CAE40191.1"
FT                   /translation="MLKSVRIAALAGAMLLAAQGAGAETVIKAVMHSPLRLTDPHATTA
FT                   YITTWHGYMIYDTLLATDADNKIQPQMLEKWEVSPDGKTYTMTLRPGQKWHDGKPVTAE
FT                   DCVASIKRWAGGDGMGRTLMKFTDRIEAVDDQTLRIVMKEPTDLALRALSKPTGTAAFM
FT                   MPKRIADIPIGQPITDMTGSGPFKVAEFKPGVKTVYVRNADYVPRQEPASGLAGGKAVH
FT                   IDRVEWNVMPDALTTANALLGGEIDFVEQFPYDLLPMVEGNPALKEEALSPVGYFTMYR
FT                   FNFKYPSFDNKKIRQAAMYAIGQEDVMKALVGNPKYWQTCASLWGCGTPFETDIGKDMV
FT                   VPSNIEKARALLKEAGYDNTPILVMHATDVGTLSAQPVVMAQALRKAGFNVNLAAMDWQ
FT                   SVATRRASKAAPAQGGWNIHNTNWYATDIMDPVRSAPAAANGDNAWFGWPDIPEIETLR
FT                   TRFALSSDPAEQKKLAEEAQRIGIDEGLYVPLGQMSVPTVYTTKLSGLVHAPVFAFWNV
FT                   KKAP"
FT   misc_feature    complement(138255..139811)
FT                   /note="HMMPfam hit to PF00496, Bacterial extracellular
FT                   solute-binding proteins, family 5, score 2.4e-18"
FT   misc_feature    complement(139743..139811)
FT                   /note="Signal peptide predicted for BPP0782 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.917 between residues 23 and 24"
FT   CDS             complement(140097..141590)
FT                   /transl_table=11
FT                   /gene="mmsA"
FT                   /locus_tag="BPP0783"
FT                   /product="putative methylmalonate-semialdehyde
FT                   dehydrogenase [acylating]"
FT                   /EC_number="1.2.1.27"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3158"
FT                   /db_xref="GOA:Q7W1B2"
FT                   /db_xref="HSSP:1CW3"
FT                   /db_xref="InterPro:IPR016162"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B2"
FT                   /protein_id="CAE40192.1"
FT                   /translation="MKTIPHFINGQPYEGRNGRYTQGFNPATGEVSSSIPLASAQDVDT
FT                   AVAAAAAAFPAWSETPPLKRARILFKFKALLDEHQDELAALITAEHGKVFSDAKGEVTR
FT                   GIEVVEFACGIPHLLKGQYTDQIGGGIDNWSMRQPLGVVAGITPFNFPMMVPCWMFPVA
FT                   LACGNTFVLKPSERDPSAALRLAELLKEAGLPDGVFNVVQGDKQAVDALIAHPQVEALS
FT                   FVGSTPIAEYIYAEGTRRGKRVQALGGAKNHMVVMPDADLDQVTDALMGAAYGSAGERC
FT                   MAISVAVAVGEVADEVVARLAPRVRALVVKDGMQADAEMGPQVTAQHRAKVTGYIEDGQ
FT                   ACGATLVVDGRGLQVPGNEGGFFLGGTLFDHVTPAMNIYREEIFGPVLCIVRVPDFAAA
FT                   VELINAHEFGNGVSCFTSDGGIARAFARQIKVGMVGINVPIPVPMAWHSFGGWKRSLFG
FT                   DHHAYGEEGVRFYSRYKSVMQRWPDSIGKGAEFTMPVAK"
FT   misc_feature    complement(140148..141560)
FT                   /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase
FT                   family, score 6.4e-167"
FT   misc_feature    complement(140736..140771)
FT                   /note="PS00070 Aldehyde dehydrogenases cysteine active
FT                   site."
FT   CDS             complement(141622..142905)
FT                   /transl_table=11
FT                   /locus_tag="BPP0784"
FT                   /product="omega-amino acid--pyruvate aminotransferase"
FT                   /EC_number="2.6.1.18"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3157"
FT                   /db_xref="GOA:Q7W1B1"
FT                   /db_xref="HSSP:1DTY"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B1"
FT                   /protein_id="CAE40193.1"
FT                   /translation="MPFTANRQFKSQPRLLARAEGMYYTSTDGRQILDGTAGLWCVNAG
FT                   HCRPEIVQAIASQAGEMDYAPGFQLGHPLAFEAATAVASFMPAGIDRVFFTNSGSESVN
FT                   TALKIALAYHRARGDAQRTRLVGRERGYHGVGFGGISVGGISANRKTFSGALLPAEDHL
FT                   PHTHSLEHNAFSKGQPAWGEHLADELERIVALHDASTIAAVIVEPMAGSTGVLVPPKGY
FT                   LQRLREITARHGILLIFDEVITAYGRLGSPTAAEHFGVTPDIITMAKGVSNAAVPAGAV
FT                   AVKREVHDAIVNGVQGGIEFFHGYTYSAHPLAAAAILATLGIYRRDDLFGRARDLSPAF
FT                   EKAAHALQGAPHVIDVRNIGLVAGIELASRPDAPGARAAEAFRKCFDSGLMVRYTGDIL
FT                   AVSPPLIIDEAQIGELFEGIGKVLKEIA"
FT   misc_feature    complement(141628..142899)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00202, Aminotransferase class-III,
FT                   score 6.2e-123"
FT   misc_feature    complement(142081..142110)
FT                   /note="PS00599 Aminotransferases class-II
FT                   pyridoxal-phosphate attachment site."
FT   CDS             join(143131..143337,143337..144584)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0785"
FT                   /product="probable GntR-family transcriptional regulator
FT                   (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3156"
FT                   /db_xref="PSEUDO:CAE40194.1"
FT   misc_feature    join(143188..143337,143337..143363)
FT                   /note="HMMPfam hit to PF00392, Bacterial regulatory
FT                   proteins, gntR family, score 1.2e-07"
FT   variation       143335..143337
FT                   /note="CTG in parapertussis; CTG(GTTG) in pertussis"
FT   CDS             complement(144548..145051)
FT                   /transl_table=11
FT                   /gene="folA"
FT                   /gene_synonym="tmrA"
FT                   /locus_tag="BPP0786"
FT                   /product="dihydrofolate reductase"
FT                   /EC_number="1.5.1.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3155"
FT                   /db_xref="GOA:Q7W1B0"
FT                   /db_xref="HSSP:1DHI"
FT                   /db_xref="InterPro:IPR001796"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1B0"
FT                   /protein_id="CAE40195.1"
FT                   /translation="MPMPATPLLSLVVAYSTNGVIGRDNALPWKLPGDLAHFKRTTLGH
FT                   PIIMGRNTWESLGRPLPGRTNIVITRNPAYGAAGAVVVGSLDAAIQACGDAAVACVIGG
FT                   AQIYAQALPLAQRVVATEVHAEIEGDAFFPPLPAGQWRETQRAAQPAENGLRYDFVEYE
FT                   RVAG"
FT   misc_feature    complement(144560..145030)
FT                   /note="HMMPfam hit to PF00186, Dihydrofolate reductase,
FT                   score 8.5e-65"
FT   misc_feature    complement(144926..144994)
FT                   /note="PS00075 Dihydrofolate reductase signature."
FT   CDS             complement(145076..146047)
FT                   /transl_table=11
FT                   /locus_tag="BPP0787"
FT                   /product="putative thymidylate synthase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3154"
FT                   /db_xref="GOA:Q7W1A9"
FT                   /db_xref="HSSP:1HW3"
FT                   /db_xref="InterPro:IPR000398"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1A9"
FT                   /protein_id="CAE40196.1"
FT                   /translation="MKQYLDLVQSILDQGAWQENRTGVRTLSLPGAALRFDLQQGFPAV
FT                   TTKKLAFKSAIGEMVGFLRATRSAAQFRALGCKVWDQNANENEQWLANPYREGPDDLGP
FT                   VYGVQWRHWPAYKLLPRSAGGQVADALARGYRQVAEVAENGAPHVLLYKAVDQLRQCLD
FT                   TIHQSPGDRRILFHGWNWAQIEEMALPPCHLLYQFLPNAGTREISLCLYIRSNDVGLGT
FT                   PFNLTEGAALLHLVGRLTGYKPRWFSYFIGDAHVYENHLPMLREQLTREPYPAPQLVLS
FT                   DRIPDFAVTGKYEPQWLEQVEPGDFTLSGYQHHAPLTAPMAV"
FT   misc_feature    complement(145082..146047)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00303, Thymidylate synthase, score
FT                   3.3e-93"
FT   CDS             complement(146114..146551)
FT                   /transl_table=11
FT                   /locus_tag="BPP0788"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3153"
FT                   /db_xref="GOA:Q7W1A8"
FT                   /db_xref="InterPro:IPR003718"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1A8"
FT                   /protein_id="CAE40197.1"
FT                   /translation="MQMECTIDWGGPAGMLFTASTGSGHVAVMDGAVDGGGHDLAPRPM
FT                   EMLLAGTGGCTAYDVVLILKRGRHAVTGCSVKLQAERADADPKVFTRIHFAFTVTGSKL
FT                   PRAAVERAVQLSHEKYCSASAMLEKTAELSFSVDIVDTQAA"
FT   CDS             146564..147343
FT                   /transl_table=11
FT                   /locus_tag="BPP0789"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3152"
FT                   /db_xref="GOA:Q7W1A7"
FT                   /db_xref="InterPro:IPR011566"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W1A7"
FT                   /protein_id="CAE40198.1"
FT                   /translation="MGAALRAIKKRSYPLRTMVGGEPRPPTGRRDFPGSIHMSTSSSAS
FT                   ALGRRAGPLDGLIGEIDRALRVLSGAATAARPYPAQAPEAPDALSERERRHAAGLMRVN
FT                   HVGEVCAQALYRGQAAACREPAARELLRQAAAEEVDHLAWCNERLRELGSRPSLLNPFW
FT                   YTGSFALGVLASYAGVPRNLGFMAETERQVEAHLDGHLRTLPVQDRRSRDIVQKMKEDE
FT                   AQHRASAERAGGVPLPAPVRGAMRAMSKVMTSTAYWL"
FT   misc_feature    148008..159510
FT                   /note="Region possibly encoding a lipopolysaccharide
FT                   O-antigen"
FT   CDS             148071..149174
FT                   /transl_table=11
FT                   /locus_tag="BPP0790"
FT                   /product="probable glycosyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3151"
FT                   /db_xref="GOA:Q7W1A6"
FT                   /db_xref="InterPro:IPR018481"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1A6"
FT                   /protein_id="CAE40199.1"
FT                   /translation="MTWLYICVVAFMVGGLIVASERWHGAFTGDSDLNKPQASHTRATP
FT                   RVGGLAVLAGSLAGLLVLGPSNMTLTWLWPALFVAALPVFVAGLLEDITKDIGASKRLL
FT                   AAFASAAIAWWLLGGVSRVGIAPVDWVLSFWPVSLIFTMFAVGGCTHALNIVDGMNGLA
FT                   GMIATLMAVSISLVALQVGDMPIFMIAAALASATLGFLVWNFPFGRVFLGDGGAYFLGF
FT                   MLAELAVLLVVRNPSVSPFYALAVLFYPVFETGFSIWRRRFKRGVPVDQPDALHLHQLV
FT                   FRRLVRVTFSRGRRHAVPALCNALASPYMWVLALIGLVPATIWWDNAWFLCASLVVFAA
FT                   VYTWLYMRLVSWRRPGWLLLPSVIRTH"
FT   misc_feature    join(148080..148148,148209..148262,148272..148340,
FT                   148377..148445,148461..148529,148548..148616,
FT                   148626..148694,148713..148769,148779..148847,
FT                   148959..149027,149037..149105)
FT                   /note="11 probable transmembrane helices predicted for
FT                   BPP0790 by TMHMM2.0 at aa 4-26, 47-64, 68-90, 103-125,
FT                   131-153, 160-182, 186-208, 215-233, 237-259, 297-319 and
FT                   323-345"
FT   misc_feature    148287..148781
FT                   /note="HMMPfam hit to PF00953, Glycosyl transferase, score
FT                   6.1e-13"
FT   CDS             149181..150554
FT                   /transl_table=11
FT                   /gene="wbpO"
FT                   /locus_tag="BPP0791"
FT                   /product="polysaccharide biosynthesis protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3150"
FT                   /db_xref="GOA:Q7W1A5"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1A5"
FT                   /protein_id="CAE40200.1"
FT                   /translation="MAPVPARGVLQRYKHVQTTYNSVAVTRLIGRFILRIDDVKLAVVG
FT                   LGYVGLPLAVEFGKKRPVIGFDINERRIAALKAGHDHTLEVEDDELAQAGQLSYTAERE
FT                   ELGKANVFIVTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGATEEDC
FT                   VPVLERVSGLKFNQDFYAGYSPERINPGDKAHRVNTIKKVTSGSTPEVAELVDQLYNEI
FT                   ITAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQAAGTKWNF
FT                   LPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKAMAKR
FT                   RIHVEGARVLLMGLTFKENCPDLRNTRVVDIVRELGEYHVDVDVYDPWVDPAEAEHEYG
FT                   ITPVAKPAAGAYDAVILAVSHHQFVEMGAEAIRKFGKAEHILYDLKYVLAPDQADLRL"
FT   misc_feature    149295..149852
FT                   /note="HMMPfam hit to PF03721, UDP-glucose/GDP-mannose
FT                   dehydrogenase family, NAD binding domain, score 8.7e-73"
FT   misc_feature    149877..150161
FT                   /note="HMMPfam hit to PF00984, UDP-glucose/GDP-mannose
FT                   dehydrogenase family, central domain, score 4.3e-44"
FT   misc_feature    150228..150512
FT                   /note="HMMPfam hit to PF03720, UDP-glucose/GDP-mannose
FT                   dehydrogenase family, UDP binding domain, score 2.8e-31"
FT   CDS             150566..151591
FT                   /transl_table=11
FT                   /locus_tag="BPP0792"
FT                   /product="UDP-N-acetylglucosamine C4 epimerase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3149"
FT                   /db_xref="GOA:Q7W1A4"
FT                   /db_xref="HSSP:1ORR"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1A4"
FT                   /protein_id="CAE40201.1"
FT                   /translation="MTNRFETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVG
FT                   LDNFATGHQHNLDEVRAAVTPEQWARFTFIEGDIRDLAACQRAVQGVDRVLHQAALGSV
FT                   PRSLKDPITTNEVNIGGFLNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIGNPL
FT                   SPYAVTKYVNELYADVFARSYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGE
FT                   DVVINGDGQTSRDFCFVENAVQANLLAAMAAPEGANQVYNVAYNARTTLTELFEHLRRA
FT                   LAGQGVSYEKAPVYAEFRAGDVRHSQADIGKAGKLLGYEPAYDILRGLEAAMPWYTQFL
FT                   R"
FT   misc_feature    150620..151585
FT                   /note="HMMPfam hit to PF01370, NAD dependent
FT                   epimerase/dehydratase family, score 2e-115"
FT   CDS             151593..152963
FT                   /transl_table=11
FT                   /locus_tag="BPP0793"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3148"
FT                   /db_xref="GOA:Q7W1A3"
FT                   /db_xref="InterPro:IPR004268"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1A3"
FT                   /protein_id="CAE40202.1"
FT                   /translation="MKAIRRKLDAIHPDHQRIFKGAFRVAVFLILGKAAGAIKEMAVAY
FT                   RYGVSDAVDAYQFTMTMATWLPVTIVGALSVVLIPVLVRLRRAGGHERDRFVRELQGWS
FT                   LAAGLALALLTWMAWPHVLDWLGGGLSGTVDGMTHELLLAFAPVAALLLMAGISAARLR
FT                   SHERHVNTLLDSVPAVTTLAWVMLAASADSVGPLLWGTLVGYAIQAAWLAWLAARADGG
FT                   FWGWPAFTLRSPHWPELAAAAGVMLVGQVAMSFVGPLDQYAAANLGSNANATLGYASRL
FT                   LSLVLGIGAVSVGRAALPVLADVQSRGDGARARAMALKWSALMVGAGAAAVVVGWLLAP
FT                   WGVALLFERGAFTAENTQAVAQVLRWGLLQLPFYFGVLILVQLLASQNRYRIMALIAVA
FT                   NFLLKAVLNTVLAPRMGTAGIMLATSLMYLLSFACYTVVALRPAPGADGGDDDREKR"
FT   misc_feature    join(151653..151706,151773..151841,151902..151961,
FT                   152004..152072,152175..152243,152301..152369,
FT                   152430..152498,152556..152624,152679..152747,
FT                   152760..152828,152847..152915)
FT                   /note="11 probable transmembrane helices predicted for
FT                   BPP0793 by TMHMM2.0 at aa 21-38, 61-83, 104-123, 138-160,
FT                   195-217, 237-259, 280-302, 322-344, 363-385, 390-412 and
FT                   419-441"
FT   misc_feature    151719..152957
FT                   /note="HMMPfam hit to PF03023, Virulence factor MVIN, score
FT                   4.9e-07"
FT   CDS             152964..154100
FT                   /transl_table=11
FT                   /locus_tag="BPP0794"
FT                   /product="putative glycosyltranferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3147"
FT                   /db_xref="GOA:Q7W1A2"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1A2"
FT                   /protein_id="CAE40203.1"
FT                   /translation="MPGPAERPLRVLIFIHSLHGGGAERVAADLSAHWARDGRAVMLVT
FT                   QADASGDVYPLHPQVLRRTLDTAGEGGGWRGVLANLRRIRALRALIKDFQPDIVLGMMT
FT                   TASVLAVLAARGLGCRVVATEHTHPPSQALSGMWLRLRRWTYPRAARVVALTRGTADWL
FT                   RTHVPGSRLAVIPNPVHWPLPRTEPVLVPPADGRPRLLAVGRLHPDKGFDVLIDAYARI
FT                   APRYPDWDLVILGEGDERAALQRRVDEAGLAQRVALPGRAGNVGDWYACAALYVLTSRF
FT                   EGLSNTLLESMASGLMPVSFDCDTGPREIVRPGVDGVLVRPAGDAGAMAQALAAAIDDE
FT                   PGRRAMAARAIDVRERFSARHVLDLWQQLFDDALSQAK"
FT   misc_feature    153513..154022
FT                   /note="HMMPfam hit to PF00534, Glycosyl transferases group
FT                   1, score 1.4e-39"
FT   CDS             154147..156072
FT                   /transl_table=11
FT                   /locus_tag="BPP0795"
FT                   /product="putative asparagine synthase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3146"
FT                   /db_xref="GOA:Q7W1A1"
FT                   /db_xref="HSSP:1GDO"
FT                   /db_xref="InterPro:IPR001962"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1A1"
FT                   /protein_id="CAE40204.1"
FT                   /translation="MCGIVGIWGPLRDKANVLAESCRRIRHRGPDSNGYWEDAEADLAL
FT                   AHVRLAILDLTEAGHQPMVSACGRYVIVLNGEIYNHMELRERLQQDGLAPAWRGHSDTE
FT                   TVLACFAGWGLEQTLQAAVGMFAIALWDRAERKLALMRDRMGEKPLYYGYSQANLLFGS
FT                   ELKAFMPVPGFGRELDRNALASFMRHNYIPAPQSIYAGIRKLPPGAWVEIDAAQMRRGE
FT                   LPEPQVYWSARRAADQGLGDRRRFESDAQAIDALEQVVSQAVRGQMLSDVSLGAFLSGG
FT                   IDSSTVVALMQAQSAQPVRTFAIGFHEKGYNEAEHAKAVAAHLGTEHTELYVTAEDGLA
FT                   VVPSLADMYDEPFADSSQIPTSLVTRMARQHVTVALSGDGGDELFGGYSRYFRVDNWWR
FT                   KCAAMPGPLRHLAGAALRGSAALPGAGAWRGKVGKLGELLGADTRGEFYRLFVSYWADP
FT                   GRVVIGGTEPLSPFEQPMEGSTFDAMMKLDTVTYLPDDILVKVDRAAMAVSLETRVPLI
FT                   DHRVYEFAWQLPFEYKVRGGTGKWLLRQLLYRHVPQAMVDRPKRGFAVPLAAWLRGPLR
FT                   DWAEALLDPARLRQEGWFEPEPILRKWREHLSGHRNWDSHLWGVLMMQAWLDRYRAGAG
FT                   DEAGRR"
FT   misc_feature    154147..154164
FT                   /note="PS00443 Glutamine amidotransferases class-II active
FT                   site."
FT   misc_feature    154150..154605
FT                   /note="HMMPfam hit to PF00310, Glutamine amidotransferases
FT                   class-II, score 8.9e-17"
FT   misc_feature    154873..155829
FT                   /note="HMMPfam hit to PF00733, Asparagine synthase, score
FT                   2.3e-53"
FT   CDS             156069..157202
FT                   /transl_table=11
FT                   /locus_tag="BPP0796"
FT                   /product="putative glycosyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3145"
FT                   /db_xref="GOA:Q7W1A0"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W1A0"
FT                   /protein_id="CAE40205.1"
FT                   /translation="MKILLLVSSMHAGGAERVAATLANGWAARGDQITLMPTYSSKGTC
FT                   FYPLSDDVELLWLADRAGTRSGGAVAAWQRLRALRAVVRERAPDVVVSFLTNVNVAAIL
FT                   ATRGLKTPLIVCERTNPVVDTSIGRVWRVLRRVLYPLADMVTVQADATVEPFARQVPGL
FT                   KQLCVIPNPLPPELFDATPAAGSGAAPAARKRLMAMGRMVPDKRFDLLIDAYAGLADEF
FT                   PDWDLWIWGEGPRRDDLQAQVAARGLATRIHMPGRTAAPWDELAKADAFVLSSAVEGFP
FT                   NVLLEAMSLGLPCAAFDCPSGPAEMTRGGRDALLVPAGQRDALRDALRDALGRLMRDPE
FT                   LRRDLGRRAAQSVRQRYALPAVLAQWDALFERVRGGA"
FT   misc_feature    156603..157124
FT                   /note="HMMPfam hit to PF00534, Glycosyl transferases group
FT                   1, score 8.6e-35"
FT   CDS             157199..158353
FT                   /transl_table=11
FT                   /locus_tag="BPP0797"
FT                   /product="putative glycosyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3144"
FT                   /db_xref="GOA:Q7W199"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W199"
FT                   /protein_id="CAE40206.1"
FT                   /translation="MTRILRVMHVITGLGQGGAESVLFRLATWPDQRVRHSVISLTDEG
FT                   VYGTRLRAAGVPVHALGMPRGRVTLGGLLALRALLRRERPDAVQTWMYHADLIGGVAAR
FT                   LAGIRAVAWGIRNSGEHLDRSSRSARLVLKLCARLSARLPAAIVCAAQDAATRHRRHGY
FT                   DGARMVVIPNGYDLSRYAPDAQARERMRSLWGVAPETPLVGCVARWDPLKDHANLLAAL
FT                   GGLVREGRDRGLQCALVGRGMSPGNAGLAALIDAEGLRGRVLLAGPSDDVPAVMNALDL
FT                   HVLSSCAEGFPNVVAEAMACGTPCVATDVGDAAYIVGDTGGVAPAQQPAALAAAIEAAL
FT                   AGIAARGRDAAGAAGRQRVLAEFDLRRMVESYEAVWRRISGERA"
FT   misc_feature    157754..158272
FT                   /note="HMMPfam hit to PF00534, Glycosyl transferases group
FT                   1, score 2.4e-25"
FT   CDS             158350..159480
FT                   /transl_table=11
FT                   /locus_tag="BPP0798"
FT                   /product="putative glycosyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3143"
FT                   /db_xref="GOA:Q7W198"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W198"
FT                   /protein_id="CAE40207.1"
FT                   /translation="MTSPRRLLFVVNNPAFFLSHRLPLAEAARADGYEVHVATMDGPSV
FT                   PDIVARGFAHHAIPMTRSGKQPLQELRSVWALVRLFRRLRPGLVHLVTIKPVLYGGIAA
FT                   RLAGVPAMVAAISGLGFVFVAGGLKARLLRAAVGRLYRLALGHRNSRIVFQNTADRDVL
FT                   ARLGAVRAAQVVMIRGSGVDLGQYRVVPEPAAPVTALMAARLLRDKGVREFVEAARLLR
FT                   GRGLSVRMQLAGGVDPGNPASITPEQAAQWQDEGCVEVLGERKDIAALYGAAHMAVLPS
FT                   YREGLPKSLLEAAACGRAVVTTDVPGCRDAIDPDVTGLLVPPRDAPALADAIARLAEDA
FT                   SLRQRMGAAGRALAEREFGIEDVCRRHLAIYRALAR"
FT   misc_feature    158665..158733
FT                   /note="1 probable transmembrane helix predicted for BPP0798
FT                   by TMHMM2.0 at aa 106-128"
FT   misc_feature    158896..159408
FT                   /note="HMMPfam hit to PF00534, Glycosyl transferases group
FT                   1, score 3.3e-32"
FT   CDS             complement(159488..161053)
FT                   /transl_table=11
FT                   /gene="pgi"
FT                   /locus_tag="BPP0799"
FT                   /product="glucose-6-phosphate isomerase"
FT                   /EC_number="5.3.1.9"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3142"
FT                   /db_xref="GOA:Q7W197"
FT                   /db_xref="HSSP:1IAT"
FT                   /db_xref="InterPro:IPR018189"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W197"
FT                   /protein_id="CAE40208.1"
FT                   /translation="MPTPLPSSSAWLAFADAARHSSRRGARLRVIEAAGLRVDLTAQAH
FT                   SDDLDSAAEDLLAQQDFDNARAQLFDGGPANWTEHRPAWHTALRAARPPTPVAGAILGE
FT                   RDRLRRFVQDADMRGAYRHVLHLGIGGSDWGPRMVTRALRHNGLKREVRFASNVDSHAV
FT                   ADALHHLDPHDTLIIVASKSFTTTEPLANAEVAMNWLRNAGVADPVRQVVAITANVDAA
FT                   LDFGISPQHIFRFWDWVGGRYSLWSAIGLPVALALGCDALDELLAGAAAMDQHFLHTPM
FT                   RRNAPLQMALAGVANRSVLGYGSLAITPYDSRLTHLVPWAQQLEMESLGKVAGHDGSPA
FT                   GVPTGPVVWGMTGTDCQHTFFQWLHQDTAGAPVDFIVCEQADHPYDHFHKLLIANCLAQ
FT                   RAALLRGKPFDEALKEARLVESDPQQAEILAHHRVHPGGRPSTLIMLPRLSAHALGALL
FT                   AMYEHKVFAQGVLWGINPFDQWGVEYGKALARNIIRELENPSSEVNQQDPSTRYWIDAL
FT                   RKQP"
FT   misc_feature    complement(159512..160939)
FT                   /note="HMMPfam hit to PF00342, Phosphoglucose isomerase,
FT                   score 1.2e-158"
FT   misc_feature    complement(159596..159649)
FT                   /note="PS00174 Phosphoglucose isomerase signature 2."
FT   misc_feature    complement(160277..160309)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    complement(160304..160345)
FT                   /note="PS00765 Phosphoglucose isomerase signature 1."
FT   CDS             complement(161060..162442)
FT                   /transl_table=11
FT                   /gene="pgm"
FT                   /locus_tag="BPP0800"
FT                   /product="phosphoglucomutase"
FT                   /EC_number="5.4.2.8"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3141"
FT                   /db_xref="GOA:Q7W196"
FT                   /db_xref="HSSP:1K2Y"
FT                   /db_xref="InterPro:IPR016066"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W196"
FT                   /protein_id="CAE40209.1"
FT                   /translation="MAHPFPASVYKAYDIRGSVPDQLDPVFARALGRALAASARAQGIG
FT                   ALVVGRDGRLSSPDLAGALQEGIMEGGVDTLDIGQVPTPLVYFAAHTQGTGSGVAVTGS
FT                   HNPPQYNGFKMMMGGQALYGPAVQALRPAMLAPAAAPGTWGERRQLDVVPAYIERIVSD
FT                   VKLARPMKIAVDCGNGVAGALAPQLFRALGCEVDELYCEVDGTFPNHHPDPAEPRNLQD
FT                   LIAHVTSTDCELGLAFDGDGDRLGVVTKSGQIIWPDRQLILFARDVLARCPGATIIYDV
FT                   KCSRHVGVAIEQSGGVPLMWQTGHSLVKAKLAETGAPLAGEMSGHIFFKERWYGFDDGL
FT                   YTGARLLEIVSRETDASRPLEALPQALSTPELKLEMAEGEPHALIVALQQQGEFASASR
FT                   LVTIDGVRAEYPDGFGLARASNTTPVVVLRFEAETQPGLARIQQEFRQQLLRLAPQAKL
FT                   PF"
FT   misc_feature    complement(161081..161332)
FT                   /note="HMMPfam hit to PF00408,
FT                   Phosphoglucomutase/phosphomannomutase, C-terminal domain,
FT                   score 1.6e-09"
FT   misc_feature    complement(161333..161677)
FT                   /note="HMMPfam hit to PF02880,
FT                   Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha
FT                   domain III, score 5e-35"
FT   misc_feature    complement(161681..161983)
FT                   /note="HMMPfam hit to PF02879,
FT                   Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha
FT                   domain II, score 5.3e-48"
FT   misc_feature    complement(162008..162433)
FT                   /note="HMMPfam hit to PF02878,
FT                   Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha
FT                   domain I, score 1.8e-35"
FT   misc_feature    complement(162107..162151)
FT                   /note="PS00710 Phosphoglucomutase and phosphomannomutase
FT                   phosphoserine signature."
FT   CDS             162676..163332
FT                   /transl_table=11
FT                   /locus_tag="BPP0801"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3140"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W195"
FT                   /protein_id="CAE40210.1"
FT                   /translation="MIRLSLLTNLNGRWPMSADISFVSTRRRMAPGRVDLTAGGERRLD
FT                   IPVHAGIDGSVEAGRAWERCVWRAARVLIAECPAPRLSARLEATLRGVAVRIARDRGWR
FT                   GIGTVVFSLDVGTGMFRMIEARLCGLQQGGPAADAASGGHALEVRISACADSGRRGAHL
FT                   LTYGATRGEALRRAYQALAKLPGLAQADRAFLMDRIASPAFCSGLTGSQLDRIAS"
FT   CDS             163424..164839
FT                   /transl_table=11
FT                   /locus_tag="BPP0802"
FT                   /product="putative oxidoreductase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3139"
FT                   /db_xref="GOA:Q7W194"
FT                   /db_xref="InterPro:IPR006094"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W194"
FT                   /protein_id="CAE40211.1"
FT                   /translation="MTLPSELRALLGPSHVLTGDDAEPFLLDWRRRYRGRALAVARPGS
FT                   AEEVAAVVRLCQAHGAPLVPQGGNTGLCGGATPDDSGSAVVLSTTRLNRVRAIDTDNDT
FT                   ITVEAGCVLQAVQQAAEQAGRLFPLSLAAEGSCTIGGNLATNAGGTQVLRYGNARELTL
FT                   GLEVVTAEGEIWNGLRGLRKDNTGYDLRDLYVGSEGTLGIITAATLKLFPLPVATCTAL
FT                   LALDSIDAAVEVLSRARGGFGASLTGFELMAADCLQAVTRLFPQQRLPFDGASADSPWF
FT                   ALLELSDSESEAHARARFEAVVGAAIEDGLVADAAIAENLAQSQALWHLRESIPLAEAE
FT                   LGKSIKHDVSIPISAIAAFVHQTNGLLQGRFPGVRNVIFGHLGDGNLHYNVARGPGQTE
FT                   ADLLGLQSQVYDAVHGSVQAFAGSISAEHGVGQLKRDELPRYKSAVELALMKRLKAALD
FT                   PRGLLNPGKVLQA"
FT   misc_feature    163532..164023
FT                   /note="HMMPfam hit to PF01565, FAD binding domain, score
FT                   7.4e-64"
FT   misc_feature    164063..164827
FT                   /note="HMMPfam hit to PF02913, FAD linked oxidases,
FT                   C-terminal domain, score 3.5e-72"
FT   misc_feature    164432..164455
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             164854..165564
FT                   /transl_table=11
FT                   /locus_tag="BPP0803"
FT                   /product="putative two-component system response regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3138"
FT                   /db_xref="GOA:Q7W193"
FT                   /db_xref="HSSP:1B00"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W193"
FT                   /protein_id="CAE40212.1"
FT                   /translation="MTAAPANRHFRVLIVEDDLTIAANLYDYLQVRGFVPDAAYDGRSA
FT                   LALLDEHAFDAMVLDVGLPGMDGHAVLHALRVERRAALPVLMLTARDGLDDKLAGFAHG
FT                   ADDYLTKPFALAEVEARLLALIQRSRGAVVDSLRSFGPLQFDSATREVAVHGKPVHLTR
FT                   KCGMIVEVLLRDPGRVVSREQLENALWGDDPPSSDALRSQVHLLRRALADAGFDGIETV
FT                   HGTGWRLALPAGGA"
FT   misc_feature    164881..165243
FT                   /note="HMMPfam hit to PF00072, Response regulator receiver
FT                   domain, score 2.2e-29"
FT   misc_feature    165322..165531
FT                   /note="HMMPfam hit to PF00486, Transcriptional regulatory
FT                   protein, C terminal, score 8.8e-13"
FT   CDS             165561..166883
FT                   /transl_table=11
FT                   /locus_tag="BPP0804"
FT                   /product="putative two-component system sensor protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3137"
FT                   /db_xref="GOA:Q7W192"
FT                   /db_xref="HSSP:1I58"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W192"
FT                   /protein_id="CAE40213.1"
FT                   /translation="MSARPVSGNGSGSLTQRVVWALTGSVALFVTALVLLSYLTFDKME
FT                   DDLVNDILSTETDRLIQHVAADDHFLPDRGARELGGAMRAWLVRAGAAQSDLPQPLHGL
FT                   GVGMHLLEPGAETWHVMVADVEDARIYVLYDATDNEARVHDFGLFVLGVGAICIVAAYG
FT                   ISRRVAGVAVGPLVELTRRLANWAPGAPDLAVTRDDEAGRLIEAFNRVQNQVDRSIARE
FT                   REFSVNVSHEVRTPLAAIRSDSEMMLLAAGLDEGLRTRLVRIVANVDNVSTALESARAM
FT                   ARDEPRAPERVDLAACMDDAWRGLEVNAEAAGLAFANRIPAGSAHVLDRYAMLTVLRNL
FT                   VRNAIEHAAPATLTAALRPDGALELRDDGRGIAAEELPFVFQRFYSGRLRDSADNGSNE
FT                   LPRGLGLAIAKRVCDMQGWQLSVDSERDGPARGTRFVLRFT"
FT   misc_feature    join(165612..165680,165996..166055)
FT                   /note="2 probable transmembrane helices predicted for
FT                   BPP0804 by TMHMM2.0 at aa 18-40 and 146-165"
FT   misc_feature    166008..166211
FT                   /note="HMMPfam hit to PF00672, HAMP domain, score 0.023"
FT   misc_feature    166221..166421
FT                   /note="HMMPfam hit to PF00512, His Kinase A
FT                   (phosphoacceptor) domain, score 0.0003"
FT   misc_feature    166542..166877
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF02518, Histidine kinase-, DNA
FT                   gyrase B-, and HSP90-like ATPase, score 2.9e-19"
FT   CDS             166963..168924
FT                   /transl_table=11
FT                   /locus_tag="BPP0805"
FT                   /product="putative sulfatase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3136"
FT                   /db_xref="GOA:Q7W191"
FT                   /db_xref="InterPro:IPR017849"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W191"
FT                   /protein_id="CAE40214.1"
FT                   /translation="MRVFFCNEADEALALPPPTRNPVRRLTIRFAIAILVLLTLSRLGL
FT                   SAWQWDRVQAAGGLGPIMLGGLRMDLRLLALVLALPAVLAPCFGHRAWAASATAWWYRV
FT                   WWMLFVLLEVSTPQFIAEYDTRPNRLYFEYLVHPREVASMLWEGYKGVLLASFVVLVLA
FT                   AWLAVRLFPTGRQDGFMKWWKRPFVTLAVLAVVVLAARGTLQHRPINASMVAFSSDAMV
FT                   NTLPLNSLGNVLDAAYRLQDERSSAALYPPMKTEEMNRIVRAAAGLEDPPLDARYPSLH
FT                   KQTATVRRDKPLNLVIILQESLGAQYVGSLGGRDLTPQLDRLAKDGWMFNRAYATGTRS
FT                   VRGLEAVTAGFLPTVAEAVLKLPRSQTGFFTLADLLGRHGFHSRFIYGGEAHFDNMRGF
FT                   FLGNGFNEVIDRQSFVDPVFVGSWGASDEDMFNQLDRLLRADDGKSTFTLAFSVSNHSP
FT                   WEYPAGRIEPVGDPASVDNTVRYADWAMGQFFDKARKAPYWDNTVFLVIADHDSRVYGA
FT                   NLVPVRHFQIPALILGGTVPPRSDDRIVSQIDMGPTLLSLIGLDNVNPMLGADLTQRDP
FT                   NRAIMQYGDNFGYLKGDSLLVIEPGKDPREYRYTAAASMRDEKYIPIDIDPALRDEALA
FT                   FALWPSWAYREERYKLPK"
FT   misc_feature    join(167044..167112,167170..167238,167257..167325,
FT                   167413..167481,167518..167577)
FT                   /note="5 probable transmembrane helices predicted for
FT                   BPP0805 by TMHMM2.0 at aa 28-50, 70-92, 99-121, 151-173 and
FT                   186-205"
FT   misc_feature    167839..168912
FT                   /note="HMMPfam hit to PF00884, Sulfatase, score 4.3e-06"
FT   CDS             complement(169113..170471)
FT                   /transl_table=11
FT                   /gene="fahA"
FT                   /gene_synonym="fah"
FT                   /locus_tag="BPP0806"
FT                   /product="fumarylacetoacetase"
FT                   /EC_number="3.7.1.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3135"
FT                   /db_xref="GOA:Q7W190"
FT                   /db_xref="HSSP:1HYO"
FT                   /db_xref="InterPro:IPR015377"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W190"
FT                   /protein_id="CAE40215.1"
FT                   /translation="MRPGHFPIQKQRQAAMSKLNETHDPALQSWVASANAADTSFPIQN
FT                   LPFAAFRRKGTQDPFRPGVAIGDAIVDLAALAAQAPFDGTAAAALAACQGERLNALMAL
FT                   DQAHWSALRLALSRALRTGSALQGRIEPLLVAQAEAEYTTPAHIGDYTDFYISVHHATA
FT                   VGKQFRPDNPLLPNYKWVPIGYHGRASSIGVDQRFARPVGQTRPAAEGEAPQFGPCQRL
FT                   DYELELGIFVGRGNAQGERIALGEAESHVFGLCILNDWSARDIQAWEYQPLGPFLAKNF
FT                   ASTISPWIVTLEALEPFRAAWTRDAADPQPLPYLESAENRAHGAFDVQMEVLISTEQSR
FT                   AKHAQPALLSRSNFRDAYWNIAQLVAHHTVNGCNLQPGDMMGTGTLSGPQASEAGSLLE
FT                   LTNGGKQPLDLPWGEQRTFLQDGDQIIMRAECSKPGYPRIGFGDCVGTVLAAK"
FT   misc_feature    complement(169290..169961)
FT                   /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA)
FT                   hydrolase family, score 5.9e-55"
FT   CDS             complement(170535..171833)
FT                   /transl_table=11
FT                   /gene="hmgA"
FT                   /locus_tag="BPP0807"
FT                   /product="homogentisate 1,2-dioxygenase"
FT                   /EC_number="1.13.11.5"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3134"
FT                   /db_xref="GOA:Q7W189"
FT                   /db_xref="HSSP:1EYB"
FT                   /db_xref="InterPro:IPR005708"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W189"
FT                   /protein_id="CAE40216.1"
FT                   /translation="MSLQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTA
FT                   FTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQRWLSDFGRQPVTPNQLRWSPLPMPDAP
FT                   TDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATE
FT                   LGLIDIEPYEIAVVPRGVRLRVELLDDVARGYMLENFGTAMRLPELGPIGSNCLANARD
FT                   FQIPVAWYEDVEGDFELIAKFTGGFWRAPIAHSPLNVVAWHGTHAPYKYDLRNFNTVGS
FT                   ISYDHPDPSIFTVLTSPSDTPGTANMDFAIFPPRILAMENTFRPPWFHRNIASEFMGLI
FT                   HGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASHADTSQAHYIRDTMAFMFETRRV
FT                   IRPTAQALASPQRQDDYYQCWQGLQKHFDPEQA"
FT   misc_feature    171883..171889
FT                   /note="Duplication due to IS1001 insertion"
FT   repeat_region   171890..171902
FT                   /rpt_type=INVERTED
FT                   /note="Inverted repeat for IS1001 element"
FT   repeat_region   171890..173196
FT   CDS             171973..173193
FT                   /transl_table=11
FT                   /locus_tag="BPP0808"
FT                   /product="transposase"
FT                   /note="transposase for IS1001 element"
FT                   /db_xref="GOA:Q7TTN6"
FT                   /db_xref="InterPro:IPR002560"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TTN6"
FT                   /protein_id="CAE40217.1"
FT                   /translation="MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCE
FT                   QCGARCRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRYQRVT
FT                   DRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPDWSKIEYLAMDEFA
FT                   LHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQLPPGAAQRIKAVAIDMTTAYEL
FT                   EIQAHSPQAEIVYDLFHVVAKYGREVIDRVRVDQANQLRQDRPARRIIKSSRWLLLRNR
FT                   DNLDRQQAVRLDELLQANQPLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGI
FT                   AALNTFAQRLKGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRA
FT                   AFPGNAR"
FT   misc_feature    172063..173052
FT                   /note="HMMPfam hit to PF01610, Transposase, score 7.9e-128"
FT   repeat_region   complement(173184..173196)
FT                   /rpt_type=INVERTED
FT                   /note="Inverted repeat for IS1001 element"
FT   misc_feature    173197..173204
FT                   /note="Duplication due to IS1001 insertion"
FT   CDS             join(173330..173416,173420..174238)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0809"
FT                   /product="putative LysR-family transcriptional regulator
FT                   (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3133"
FT                   /db_xref="PSEUDO:CAE40218.1"
FT   variation       173417..173419
FT                   /note="In-frame TAG stop codon in B. parapertussis; CAG in
FT                   pertussis and bronchiseptica"
FT   misc_feature    173606..174226
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 2.4e-17"
FT   CDS             complement(174248..174457)
FT                   /transl_table=11
FT                   /locus_tag="BPP0810"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3132"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W188"
FT                   /protein_id="CAE40219.1"
FT                   /translation="MPLITTPNLAGPDNFYEALIDTHRDLSDEQSRELNAALILLLANH
FT                   IGDMAVLRAALEHARQSVVAPPAP"
FT   CDS             complement(174469..176148)
FT                   /transl_table=11
FT                   /locus_tag="BPP0811"
FT                   /product="putative oxygenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3131"
FT                   /db_xref="GOA:Q7W187"
FT                   /db_xref="InterPro:IPR003042"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W187"
FT                   /protein_id="CAE40220.1"
FT                   /translation="MGDIDYQAIEFAYTKCADQQRDTPARHCVIVVGAGPVGLTTALDL
FT                   ARQGLRVVVLDDDYRLSTGSRAICFAKRTLEIWDRLGVGQRMVDKGVSWNVGKVFFRDQ
FT                   EVWRFDLLPEPGHRRPAFINLQQYYAEGYLHELASAQPGIELRWKSKVVGVAQQADGVQ
FT                   VTVDTPDGAYALHVDWLVACDGARSPVRKLLDLETHGRVFKDRFLIADVKMAADYPAER
FT                   WFWFDPPFHPNQSVLLHMQPDNVWRIDFQLGWNADPVEAVKPENVLPRIRALLGPDADF
FT                   ELEWVSVYTFACERMDHFRHGRVVFAGDSAHRVSPFGARGANSGVQDAENLAWKLKLVL
FT                   AGHAPESLIDSYAAEREYAADENILNSSRSTDFITPKSEVSRTFRNAVLNLARQHPFAR
FT                   TLVNSGRLSVPAAYADSPLNTPDSDPYAGTMRPGAVALDAPVRADAQPGWWLSQLDGGF
FT                   ALALFCGAETPRADMLDALRALQQDEVPVQPILVCDAGAAPAAAPAGVRVVEDSEGWLA
FT                   RRYDARPGTCYLIRPDQHIAARFRAFDAQAVRRALARAIGRA"
FT   misc_feature    complement(175045..175623)
FT                   /note="HMMPfam hit to PF01360, Monooxygenase, score
FT                   2.3e-35"
FT   misc_feature    complement(175645..176064)
FT                   /note="HMMPfam hit to PF01494, FAD binding domain, score
FT                   7.5e-11"
FT   CDS             complement(176250..177269)
FT                   /transl_table=11
FT                   /locus_tag="BPP0812"
FT                   /product="putative cyclase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3130"
FT                   /db_xref="GOA:Q7W186"
FT                   /db_xref="InterPro:IPR001279"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W186"
FT                   /protein_id="CAE40221.1"
FT                   /translation="MHKNKRRAIFPSTHSYKWKEPTVSKQFASHADLEDKVVSFEKLSD
FT                   NAYAYTAEGDPNTGIIVGDDAVMVVDTQATPVMAQDVIRRVREVTDKPIKYILLSHYHA
FT                   VRVFGASAYGAQEILASRDTYDLIAERGEQDKASEIGRFPRLFRNVESIPPGLVWPTMT
FT                   FKGEMTVDLGNLEVKLLQVGRGHTKGDTIAWLPEQKILFAGDLVEYQSTPYCGDCYFRE
FT                   WPATLDALAGFEAEKMVPGRGPALKSATEVRQGLAGTRAFLTDLYAAVNRGVADGKDLK
FT                   TIYREVYDFMKPRYSQWVIFDHCMPFNVSRAYDEATGHYDPRIWTDKRDIEMWQQLES"
FT   misc_feature    complement(176544..177119)
FT                   /note="HMMPfam hit to PF00753, Metallo-beta-lactamase
FT                   superfamily, score 5.5e-11"
FT   CDS             complement(177293..178120)
FT                   /transl_table=11
FT                   /gene="mutM"
FT                   /gene_synonym="fpg"
FT                   /locus_tag="BPP0813"
FT                   /product="formamidopyrimidine-DNA glycosylase"
FT                   /EC_number="3.2.2.23"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3129"
FT                   /db_xref="GOA:Q7W185"
FT                   /db_xref="InterPro:IPR012319"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W185"
FT                   /protein_id="CAE40222.1"
FT                   /translation="MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLL
FT                   AGRTVLECGRRGKYLLLRFDHGVQIVHLGMSGSLRRVPEQEAPRKHGHVDWVFDHAVLR
FT                   LHDPRRFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALL
FT                   AGDAVVGVGNIYASESLFRAGIDPRTAAQRVSAARCDRLAAAIRATLSDALDSGGSTLR
FT                   DYVGASGEPGAYFAIHAAVYERAGLPCRVCGAPIRRLVQGQRATYFCPSCQKR"
FT   misc_feature    complement(177302..177376)
FT                   /note="PS01242 Formamidopyrimidine-DNA glycosylase
FT                   signature."
FT   misc_feature    complement(177302..178120)
FT                   /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA
FT                   glycosylase, score 6.8e-102"
FT   CDS             178119..179999
FT                   /transl_table=11
FT                   /locus_tag="BPP0814"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3128"
FT                   /db_xref="GOA:Q7W184"
FT                   /db_xref="InterPro:IPR016160"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W184"
FT                   /protein_id="CAE40223.1"
FT                   /translation="MSQCKIINCVYEDCAINRTGRVKLSLKHINFGVAALALAGLQSLP
FT                   AQAAEVRPRDATGPRLIQPSKQPETEVIRLRPGQLPYVSLTADIFYRIVGAELAAQRGM
FT                   YGTAAATLVTLARETGDPRLARRGLEFQLAGGNLPGALDAARAWSSLAPNDIEASSTEL
FT                   ALAAANGETSGLATALRKRIDTARDKPAAIVQAMGVLSRLNDRRLALRILDESLSDSAR
FT                   KLPAAHLALADVAQAAGDYPRAANEAYAALAADPKSEAAAQRVLEYGAKVDATRAQHQA
FT                   RAFINRNPDARKLRLMLAGQIADGGDYDGALAELQAMARRSPEDFDLMFMQAQLAYKAG
FT                   RLDQARGYLQQYLDVQNQRQMATAPGATDAGAAAADAHVLLSRIAEDQGRYDEAIRELG
FT                   RIDDPAMRYSAHMRQATLRARQGRIDDALAMVDRADPQDDEERTLGVLTKAQILRDADQ
FT                   VDRAVAILVAADKAMPDTVEIKYELAMLYERQGRIDQLERLLREVIALDPDHAHAYNAL
FT                   GYTLADRNQRLPEALDLITQALELSPEDPFILDSMGWVKFRMGEPSAAIEYLKRAYALR
FT                   PEADIAAHLAEVLWVQGERDSATELLRTAYAKDPKNRALLDTMRRLEVRP"
FT   misc_feature    178119..178262
FT                   /note="Signal peptide predicted for BPP0814 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.992) with cleavage site
FT                   probability 0.992 between residues 48 and 49"
FT   misc_feature    178626..178649
FT                   /note="PS00687 Aldehyde dehydrogenases glutamic acid active
FT                   site."
FT   misc_feature    178791..178892
FT                   /note="HMMPfam hit to PF00515, TPR Domain, score 10"
FT   misc_feature    179094..179195
FT                   /note="HMMPfam hit to PF00515, TPR Domain, score 25"
FT   misc_feature    179547..179648
FT                   /note="HMMPfam hit to PF00515, TPR Domain, score 0.7"
FT   misc_feature    179649..179753
FT                   /note="HMMPfam hit to PF00515, TPR Domain, score 1.6"
FT   misc_feature    179754..179855
FT                   /note="HMMPfam hit to PF00515, TPR Domain, score 0.32"
FT   CDS             179996..180595
FT                   /transl_table=11
FT                   /locus_tag="BPP0815"
FT                   /product="putative outer membrane lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3127"
FT                   /db_xref="GOA:Q7W183"
FT                   /db_xref="InterPro:IPR004565"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W183"
FT                   /protein_id="CAE40224.1"
FT                   /translation="MSVCPAPRSPVRWLHAFTLCLLLAVLAGCVSVPKPMAGAGEDVFS
FT                   RVGRFAITVTESDGKQQAVQGGFAWRDDGGSYLLDLTNPLGSTEARVEGRPGMAVLTRA
FT                   NGERLAAEHPDALAEDALGSPVPVTGLRDWLRGRLMAGAAPDGLERDAQGRPTAFEQDG
FT                   WNARLSRYDAQGPQLLVLQRQEPGRRILVRLVITQP"
FT   misc_feature    179996..180106
FT                   /note="Signal peptide predicted for BPP0815 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.649) with cleavage site
FT                   probability 0.427 between residues 37 and 38"
FT   misc_feature    180032..180091
FT                   /note="1 probable transmembrane helix predicted for BPP0815
FT                   by TMHMM2.0 at aa 13-32"
FT   misc_feature    180035..180550
FT                   /note="HMMPfam hit to PF03550, Outer membrane lipoprotein
FT                   LolB, score 9.3e-09"
FT   misc_feature    180050..180082
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             180644..181543
FT                   /transl_table=11
FT                   /gene="ispE"
FT                   /gene_synonym="ipk"
FT                   /locus_tag="BPP0816"
FT                   /product="4-diphosphocytidyl-2-C-methyl-D-erythritol
FT                   kinase"
FT                   /EC_number="2.7.1.-"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3126"
FT                   /db_xref="GOA:Q7W182"
FT                   /db_xref="InterPro:IPR014721"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W182"
FT                   /protein_id="CAE40225.1"
FT                   /translation="MTLYDVPAPAKLNLFLHVVGRRADGYHLLQTAFRFIDLADTLHFE
FT                   ARADGAIGRAYELPGVAESDDLVVRAARSLQRATGTRQGAQIGLHKRIPQGGGLGGGSS
FT                   DAATTLIALNRLWGTGLSRSQLMQLALPLGADVPVFVFGQSAFAQGVGEDLTAVALPPA
FT                   AYLVVQPDAGVPTAAIFSDPDLTRDCASVTIADFLALLTSCFGRNDLEPVVLRRYPEVS
FT                   GAVRWLFEHGLRVRMSGSGACLFAEFPTLPEAVLAQEEITATMRVAGKTTSHTHPGFRL
FT                   VQASTGLTEHPLRNWIAS"
FT   misc_feature    180650..181489
FT                   /note="HMMPfam hit to PF00288, GHMP kinases putative
FT                   ATP-binding protein, score 1.9e-21"
FT   tRNA            181545..181621
FT                   /note="tRNA Gln anticodon TTG, Cove score 77.70"
FT   CDS             181770..182702
FT                   /transl_table=11
FT                   /gene="prsA"
FT                   /gene_synonym="prs"
FT                   /locus_tag="BPP0817"
FT                   /product="ribose-phosphate pyrophosphokinase"
FT                   /EC_number="2.7.6.1"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3125"
FT                   /db_xref="GOA:Q7W181"
FT                   /db_xref="InterPro:IPR005946"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W181"
FT                   /protein_id="CAE40226.1"
FT                   /translation="MIFTGTANTRLAVDVVNHLDMSLGKMTVGRFSDGEVMVEINENVR
FT                   GKDVFVLQPTCAPTNDNLMEIMVMVDALRRASAGRITAAIPYFGYARQDRRPRSARVAI
FT                   SAKVVANMLQVAGVDRVLTMDLHADQIQGFFDIPVDNIYAGPILLGDIWRRNFSNLVVV
FT                   SPDIGGVVRARALAKQLEADLAIIDKRRPRANVSEVMNIIGEVDGRTCIIMDDMVDTAG
FT                   TLCKAAQALKDRGAGAVYAYCTHPVLSGGAIERIETSSLDELVVTDTIPLSEQGQACGK
FT                   IRQLSCAALLGETILRISNAESVSSLFAD"
FT   misc_feature    182112..182141
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT   misc_feature    182142..182189
FT                   /note="PS00114 Phosphoribosyl pyrophosphate synthetase
FT                   signature."
FT   misc_feature    182163..182573
FT                   /note="HMMPfam hit to PF00156, Phosphoribosyl transferase
FT                   domain, score 2.9e-36"
FT   misc_feature    182400..182438
FT                   /note="PS00103 Purine/pyrimidine phosphoribosyl
FT                   transferases signature."
FT   CDS             182825..183439
FT                   /transl_table=11
FT                   /gene="rplY"
FT                   /locus_tag="BPP0818"
FT                   /product="50S ribosomal protein L25"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3124"
FT                   /db_xref="GOA:Q7W180"
FT                   /db_xref="HSSP:1DFU"
FT                   /db_xref="InterPro:IPR020055"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W180"
FT                   /protein_id="CAE40227.1"
FT                   /translation="MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNE
FT                   IYHALRKEEFHASILNMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVDANQALHTKV
FT                   PLHFINAEVSPAVKLSGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIK
FT                   LPKGVTFNAHGGDTNPLIAAAVVKGGGAADEGDAAAEQPAA"
FT   misc_feature    182831..183097
FT                   /note="HMMPfam hit to PF01386, Ribosomal L25p family, score
FT                   2.4e-27"
FT   misc_feature    183278..183310
FT                   /note="PS00626 Regulator of chromosome condensation (RCC1)
FT                   signature 2."
FT   CDS             183517..184164
FT                   /transl_table=11
FT                   /gene="pth"
FT                   /locus_tag="BPP0819"
FT                   /product="peptidyl-tRNA hydrolase"
FT                   /EC_number="3.1.1.29"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3123"
FT                   /db_xref="GOA:Q7W179"
FT                   /db_xref="InterPro:IPR001328"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W179"
FT                   /protein_id="CAE40228.1"
FT                   /translation="MRRVLYFTNTRPDAYATMSDPIRLIVGLGNPGPDYETTRHNAGFW
FT                   LADHLADDLRTAFALEKGFFGMLAKARHAGENVVLLKPITYMNRSGQSVGAVARFYKLA
FT                   PEQVLVLHDELDLLPGQVKIKQGGGHAGHNGLKDIQAALGSPNFWRLRIGIGHPRSLGL
FT                   AQQVADFVLHPPRREEQQQIDTVIDRCRAVVPAMLAGDFALATRELHGANGA"
FT   misc_feature    183577..184146
FT                   /note="HMMPfam hit to PF01195, Peptidyl-tRNA hydrolase,
FT                   score 6.1e-71"
FT   misc_feature    183619..183660
FT                   /note="PS01195 Peptidyl-tRNA hydrolase signature 1."
FT   misc_feature    183901..183933
FT                   /note="PS01196 Peptidyl-tRNA hydrolase signature 2."
FT   CDS             184161..184943
FT                   /transl_table=11
FT                   /locus_tag="BPP0820"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3122"
FT                   /db_xref="GOA:Q7W178"
FT                   /db_xref="InterPro:IPR003675"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W178"
FT                   /protein_id="CAE40229.1"
FT                   /translation="MSDVTTARQGAARATTFRQDLADCWRFLRRPTLSGRLPGRRADSG
FT                   WASDWRPGVGASRLLAWAAVLWALNLFALGPIAVTVAGAGGAMHRLDLANIPWLTAILW
FT                   APLVEELLFRYGLRRPAQALWFCPMVLPAILWGAQGWTLALVAVAVWLAWLSLRRGRAS
FT                   LAGWDTSWRRYYSYRFGLVFHLVALTFAAVHLNNFSLSQTPIWLLPLLVLPQWATGLVL
FT                   GWMRVRRGIGAAIALHALFNGGSVLMIWLLMTLMPAGA"
FT   misc_feature    join(184335..184403,184557..184625,184686..184745,
FT                   184773..184832,184851..184919)
FT                   /note="5 probable transmembrane helices predicted for
FT                   BPP0820 by TMHMM2.0 at aa 59-81, 133-155, 176-195, 205-224
FT                   and 231-253"
FT   misc_feature    184446..184907
FT                   /note="HMMPfam hit to PF02517, CAAX amino terminal protease
FT                   family, score 0.02"
FT   CDS             185016..186107
FT                   /transl_table=11
FT                   /locus_tag="BPP0821"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3121"
FT                   /db_xref="GOA:Q7W177"
FT                   /db_xref="HSSP:1JAL"
FT                   /db_xref="InterPro:IPR002917"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W177"
FT                   /protein_id="CAE40230.1"
FT                   /translation="MALQCGIVGLPNVGKSTLFNALTGAGIAAENYPFCTIEPNVGVVE
FT                   VPDPRLDKLAEIVKPERILPATVEFVDIAGLVAGASQGEGLGNQFLSHIRETNAIVNVV
FT                   RCFEDPNVVHVAGKVDPIADIEVIETELALADLQTAEKALHRHSKTARSGDKDAQRLVT
FT                   VLEKCIAQLNQAKPVRGLDLSDEEQALIAQLCFITAKPAMYVGNVSDDGFTDNPLLERL
FT                   AEFAKSRNAPMVAICAAIESEIVDLPEEDRQAFLSDMGMEEPGLNRLIRGAFTLLGLQT
FT                   YFTAGVKEVRAWTIPIGATASQAAGVIHTDFERGFIRAQTIAYEDFIACKGEQGAKEAG
FT                   KMRAEGKEYVVKDGDVMNFLFNV"
FT   misc_feature    185016..185042
FT                   /note="PS00443 Glutamine amidotransferases class-II active
FT                   site."
FT   misc_feature    185040..185063
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(186206..190108)
FT                   /transl_table=11
FT                   /locus_tag="BPP0822"
FT                   /product="autotransporter"
FT                   /note="Similar to Serratia marcescens extracellular serine
FT                   protease precursor SWALL:PRTS_SERMA (SWALL:P09489) (1045
FT                   aa) fasta scores: E(): 1.4e-26, 32.9% id in 626 aa, and to
FT                   Rhizobium loti serine proteinase Mlr1935 SWALL:Q98JH8
FT                   (EMBL:AP002998) (1213 aa) fasta scores: E(): 5.2e-81,
FT                   33.51% id in 1262 aa"
FT                   /db_xref="GOA:Q7W176"
FT                   /db_xref="InterPro:IPR005546"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W176"
FT                   /protein_id="CAE40231.1"
FT                   /translation="MEISNAPGTLDSPYVWATPDDNVTGQLIFNHSAGDYEFAPAILQN
FT                   VAVVHAGVGATTLVGGNTYTGGTTLDAGVLGISANANLGNPNGALVFNGGTLRTTGFIT
FT                   MNRATALGAGNGAFDVASGASLTQQGIVSGSGALTKTGPGSLTLSGVNTYAGGTVIEAG
FT                   TLRIAQSGNLGTGPLTLNGGTLEATAPLTLYADTWIDGSGTISTTSSLTLEGSINGRAG
FT                   VKISSGPTGTVILNGAHNALPTAFVTGQSTLQVNGTLEAIIDIGGASRLSGSGTVGNTS
FT                   IQHGSTLSPGQSSIGTLTVNGDLTLHDGSILDYQLGGPGTSSDPASGIGSRVNVTGNLT
FT                   LNGALNLRSSSDTAQDGVPGLGYYRLMTYGGTLSGTGLSIGSTPVFSDPAHFEIQAGGG
FT                   NVDLFIAALGHDTLQHWQGGDGAWNSANAQWLNRNGEVAAGWAGNQAVFKNQPGGFGGG
FT                   TITVAGMQQFKGLQFVDDGYRLEGSGQLVIDGSERGDGNAEIRVLANSAEISTEITGSG
FT                   GITKTDAGTLVLSGNNSYQGSTHILGGAVSIASDRNLGATGAGILLSGGTLATTADMAI
FT                   GRNITLAGNGGFDVAAGTTLAATGPIGGTGALVKTGTGTLRLAGANLYAGGTRVRQGVL
FT                   IGDTASIRGNIANDGEVAFQQATGGVFAGDISGSGLMRKLGAGSLALAGRNAQDWAVDT
FT                   GPLRSAGSRFAGDVAIGANGIFVLDDAQAAAYAGALSGTGRFHKQGAGSLLLTGDSASF
FT                   TGHATVSAGTLRVGDRHGGGVLGGSLDVQAGATLGGSGTVGSGAGSQVTVASGGTLAPG
FT                   NSVGTLTVNGDLVLDKGSRFEVEVDPQGTRSDQVAVTGNTTIQGGAVAHVGATGQYQLR
FT                   STYTLLTTGGALSGRFDTVSSDFAFLTPELRYDYGAGTVGLALARNDRSFASMALTDNQ
FT                   YATAQGIDSIGVAAGHAVYDAVAQLPDDAPLVRASLDALSGEIHASAKTALIEDSRFVR
FT                   DAAKDRVRAAFAAPGASTAAVSARAADGAPTAVAATHDGPAAWSQAFGSWGSTDSDGNA
FT                   ARLERNVGGVLIGADRLMGNWRVGALAGYSQTDAKARDRASSGRSDNYHLGLYGGTQSG
FT                   ALGVRTGLAYSWHDIRTRRSVDIPGLSDSLRADYGGGTFQAFGELGYGIELNDTTRLEP
FT                   FASLAYVRLHTDGYRESGGAAALTTGSANTETTFSTLGLRAEHALGSGAAQGTVRATAG
FT                   WRHAMGDTTPQARHAFSAGDAFTVAGAPIAQDSAVIELGVDLAVARNTRFGLSYAGQIA
FT                   GSAQDHGVRADLSIRF"
FT   misc_feature    complement(186212..187285)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF02385, , score 0.0016"
FT   CDS             190999..192570
FT                   /transl_table=11
FT                   /locus_tag="BPP0823"
FT                   /product="putative regulatory protein"
FT                   /note="Its internal region is similar to many
FT                   transcriptional regulators such as Rhizobium meliloti
FT                   putative response regulator protein Rb0212 or Smb20219
FT                   SWALL:Q92WW5 (EMBL:AL603642) (245 aa) fasta scores: E():
FT                   2.1e-05, 33.01% id in 103 aa, and to Rhodobacter
FT                   sphaeroides DmsR SWALL:O32479 (EMBL:D89075) (232 aa) fasta
FT                   scores: E(): 0.00018, 32% id in 100 aa"
FT                   /db_xref="GOA:Q7W175"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W175"
FT                   /protein_id="CAE40232.1"
FT                   /translation="MSIPSVRYADLVFQPDLRAATRDDGAKLSLTRQERALILQLTERP
FT                   HQLITRQQLLEGLGDLAGELSERNIDYLVNRLRKRLGDNARTPRFIATQYGEGYIWVAD
FT                   PIAVAPVSAFLLIGPVYGLGENEQAAAVVKRLGGHIGQALHGSRKVLCLPQWRFEPETA
FT                   SHIAHSLEISLWPEDGQLHMALVLKDGRSNTPIRPFRLTVPLAGENAELAAFAQSLADA
FT                   IWAHAALPGGEPPNPTDRPLLLRLHDAAVLVTGDIESWRHNAQRLRAAQADNPDDPALA
FT                   VLLALNRYTELIQGPLSPDTPPLTDVQWRGIEDDIEQLALGALAKARSEPMLLLGIAKV
FT                   LCFIDRGYLKLAATLTEEAFEASTAFAAAFTMKALTLACQGEIDRAVDLYDRAIELAET
FT                   GSQFHIYLLILKGSALLAADRRGEVAQMVAELSALDPASRGWVGLIFLSPKSKRTPPAL
FT                   AMIPKEAGRRMLTYLHRTTARQFERRHHQKNVLHGLAIHLARVHGADVIPSPLREYFPK
FT                   RFADAS"
FT   misc_feature    191074..191292
FT                   /note="HMMPfam hit to PF00486, Transcriptional regulatory
FT                   protein, C terminal, score 1.5e-09"
FT   misc_feature    192097..192198
FT                   /note="HMMPfam hit to PF00515, TPR Domain, score 0.027"
FT   CDS             complement(192621..193625)
FT                   /transl_table=11
FT                   /locus_tag="BPP0824"
FT                   /product="putative exported protein"
FT                   /note="Similar to Comamonas testosteroni OrfJ protein
FT                   SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E():
FT                   4.2e-28, 34.41% id in 340 aa, and to Rhizobium meliloti
FT                   hypothetical protein Ra1058 ra1058 or sma1927 SWALL:Q92Y30
FT                   (EMBL:AE007292) (330 aa) fasta scores: E(): 6.8e-26, 33.53%
FT                   id in 331 aa"
FT                   /db_xref="GOA:Q7W174"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W174"
FT                   /protein_id="CAE40233.1"
FT                   /translation="MYRRILAAAAAAISALLPLHASADSYPSKPISLVVGFAAGGGSDV
FT                   LTRAFAKYLNAEIGVPIVVENRPGADSLLASQAIKNAKPDGYTIYLATSTHAVNPSLFS
FT                   EAKFKVRDDVTPISMIGEAPVAIAIAPMLPTRTLQEFIDYAKAHGGQLNYGTSASNTYL
FT                   ETAYMLRAAGLDMQRIPYKGAAPASVALMSGEIQLLLSTVGHLAPLVQSGKVRALAVTS
FT                   AGRSTLMPDLPTTREAGMPDFMPNLSTANDAGLPNVTSSIWYALLAPPGVPADVVKRLN
FT                   QSTQAVLRNPEFMSQMVTMGVELRPSSPEGLGQFLEAEEAKWQKIVDDIGARQ"
FT   misc_feature    complement(192630..193490)
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 4.6e-62"
FT   misc_feature    complement(193557..193625)
FT                   /note="Signal peptide predicted for BPP0824 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.955 between residues 23 and 24"
FT   CDS             complement(193998..194738)
FT                   /transl_table=11
FT                   /locus_tag="BPP0825"
FT                   /product="putative TetR-family transcriptional regulator"
FT                   /note="Similar to Bacillus halodurans transcriptional
FT                   regulator Bh3797 SWALL:Q9K6D2 (EMBL:AP001520) (202 aa)
FT                   fasta scores: E(): 7.8e-19, 31.63% id in 196 aa, and to
FT                   Streptomyces coelicolor putative TetR-family
FT                   transcriptional regulator Sco5170 or Scp8.33C SWALL:Q9FBI8
FT                   (EMBL:AL390975) (213 aa) fasta scores: E(): 3.5e-06, 36.92%
FT                   id in 130 aa"
FT                   /db_xref="GOA:Q7W173"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W173"
FT                   /protein_id="CAE40234.1"
FT                   /translation="MPHSVDDSSLVTRRRAQLVKAAIKLFSRMGYHAATVKDIAQEAGV
FT                   SAGLMYQYVPDKQDLLFLALQHIVQRNKEEVPSALLGVEDPIARLYRAIDAYTRVMAAN
FT                   QQAVLLTYRETKSLKPEYIEQMKQLELDTNRLIEACATDCIRAGYLAPTNVELLVYRII
FT                   IAAHAWPLKHWRLRRIVTLDEYLDQAIHAAWKDLLLPRGSSRYEELRRAGELRPVHLAG
FT                   ESDDGASRAAGTEPKKRARRGRAA"
FT   misc_feature    complement(194547..194687)
FT                   /note="HMMPfam hit to PF00440, Bacterial regulatory
FT                   proteins, tetR family, score 7.9e-14"
FT   misc_feature    complement(194559..194651)
FT                   /note="PS01081 Bacterial regulatory proteins, tetR family
FT                   signature."
FT   CDS             complement(194965..195912)
FT                   /transl_table=11
FT                   /locus_tag="BPP0826"
FT                   /product="putative membrane protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W172"
FT                   /protein_id="CAE40235.1"
FT                   /translation="MQMDLSKIQFGVDVATSLAILASAITFLINQRLKTRETKRRQLDE
FT                   SVRAVTVDEFQSALGNLSTAYVKEIVRHTVPLQASVSRGLERLEKSLELDPKRANVLMD
FT                   AMANTTQAISDYINAICAYNYQIYPLLDSIEGGESQIQEFRRNLQRLMDSYNNIGRGHE
FT                   SLFKEVRALCDFCAAHPLEQADHEALQRMAMSIVADKDYRQWVDSFVPSGKEEAYWTCV
FT                   DKGDFEGEKDLLMRVVSNVIGGFYKAPARMQAQVIYLAYSAIIDARQQCKEFLVGMAAI
FT                   NYWLIRKGGGSESLPDVIQRYRSQAVFAVDSEIR"
FT   misc_feature    complement(195826..195882)
FT                   /note="1 probable transmembrane helix predicted for BPP0826
FT                   by TMHMM2.0 at aa 10-29"
FT   CDS             196129..197304
FT                   /transl_table=11
FT                   /locus_tag="BPP0827"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Ralstonia solanacearum putative drug
FT                   transport transmembrane protein Rsc2316 or Rs01233
FT                   SWALL:Q8XX02 (EMBL:AL646069) (399 aa) fasta scores: E():
FT                   3.4e-43, 39.17% id in 388 aa, and to Rhizobium loti
FT                   hypothetical protein Mlr8412 mlr8412 SWALL:Q983A8
FT                   (EMBL:AP003014) (405 aa) fasta scores: E(): 1.6e-41, 36.73%
FT                   id in 392 aa"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W171"
FT                   /protein_id="CAE40236.1"
FT                   /translation="MNRNLWLLSVLQGLFLTNNVTFIAINGLVGFALAPYGWMATLPVM
FT                   GYVVGGALCTGPVAWTQKRYGRKGSFMLGLLVAAGSALLCAFAAYIGNFWLLCAATAIA
FT                   GYYSANGQLYRFASAELAAPGAREKAVSLVMAGGLLGAVVGPNLASFTKELFVTPFLGA
FT                   YLALAVVALLAMAVLARIEFPEVAQRASANGGRPLSVIARQPAFIVATGAGALGYGVMN
FT                   LLMAATPLAMQHHGLPFADAAFVLEWHVIGMFAPGFFTGHLIKRFGVLPIMGWGAALNL
FT                   VCIGVALSGVELHHFTVSLFLLGVGWNFLFTGSTTLSLSTYTAEEKDRAQAAMNFCVFA
FT                   VMAVTSLTSGMLVTTRGWTVLNVGSLVPMLMICVGLAWLAWRKAPSRAAVG"
FT   misc_feature    join(196147..196215,196228..196296,196333..196401,
FT                   196411..196479,196516..196584,196612..196680,
FT                   196741..196809,196837..196905,196924..196992,
FT                   197020..197088,197122..197190,197200..197268)
FT                   /note="12 probable transmembrane helices predicted for
FT                   BPP0827 by TMHMM2.0 at aa 7-29, 34-56, 69-91, 95-117,
FT                   130-152, 162-184, 205-227, 237-259, 266-288, 298-320,
FT                   332-354 and 358-380"
FT   CDS             complement(197351..198136)
FT                   /transl_table=11
FT                   /locus_tag="BPP0828"
FT                   /product="GntR family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3452"
FT                   /db_xref="GOA:Q7W170"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W170"
FT                   /protein_id="CAE40237.1"
FT                   /translation="MRHPRMGAGYTIRSPSWPFLPDRTSMTRQPQSADIEELPLGRTSK
FT                   SLPEQVADRLMQSIQTGVLQPGERLKEETLSDRFAVSRTTVREAISTLERRGVIERVPR
FT                   FGARVRDIRADEIEEIFCIRAQLLGLAARRVAEHGDDEILAQLRQQVERLRQLADKPST
FT                   SPASYAKVSIETQQLLIQAVGWKQLGTMYEGLSNQMLWKTSVRGKSLSFQSQQRRRESV
FT                   GDWQRLLEAVCTRDAAAAEESAKLLLGASYRAVRGQLAS"
FT   misc_feature    complement(197810..197986)
FT                   /note="HMMPfam hit to PF00392, Bacterial regulatory
FT                   proteins, gntR family, score 4.8e-16"
FT   misc_feature    complement(197858..197932)
FT                   /note="PS00043 Bacterial regulatory proteins, gntR family
FT                   signature."
FT   CDS             complement(198133..199830)
FT                   /transl_table=11
FT                   /locus_tag="BPP0829"
FT                   /product="putative acetolactate synthase large subunit"
FT                   /EC_number="2.2.1.6"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3453"
FT                   /db_xref="GOA:Q7W169"
FT                   /db_xref="HSSP:1OZH"
FT                   /db_xref="InterPro:IPR012000"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W169"
FT                   /protein_id="CAE40238.1"
FT                   /translation="MPIIARLPIQKIMNPTLAARTGGRILVDALKVHGVGQAFCVPGES
FT                   YLPVLDALRDDAQAIRLTVCRQEGGAAFMAEAYGKLTGKPGICFVTRGPGATNASIGVH
FT                   TAFQDSTPMILFVGQVGADVAEREAFQEIDYRRMYGQMAKWVASIDDAQRIPEFVHRAH
FT                   QVALSGRPGPVVLALPEDVLRATAHAADRVPHRIARACATSADMKRLHELLAAARRPLL
FT                   IVGGGGWNEAASAAITRYAERAGLPVATAFRRQDRFDNRHPCYAGHIGLGIAPSLARHV
FT                   RQADLLLVVGARLADATTDSYALITPEHPGQTLIHVHHDPQELGRVYPADLPIATDVQA
FT                   FAAQLDACDNPPARCDAWLRELADDYRTDLAVAPSRRDTDLAQVMHWLNQHLPQNAIVT
FT                   NGAGNYAGWVHRYFQYSPQRRQLAPTNGAMGYGVPAAIAAKLAAPARTVVCFAGDGCFM
FT                   MNGQELATAIQHDAAVVFIVVNNGMFGTIRMHQEMHYPGRVSGTSLRNPDFVALASAYG
FT                   AHAERVAHHDDFPAAFERACASGRAALIEIRTDPAAISARRDLPTLAA"
FT   misc_feature    complement(198190..198711)
FT                   /note="HMMPfam hit to PF02775, Thiamine pyrophosphate
FT                   enzyme, C-terminal TPP binding domain, score 2.8e-51"
FT   misc_feature    complement(198463..198522)
FT                   /note="PS00187 Thiamine pyrophosphate enzymes signature."
FT   misc_feature    complement(198745..199224)
FT                   /note="HMMPfam hit to PF00205, Thiamine pyrophosphate
FT                   enzyme, central domain, score 8.3e-16"
FT   misc_feature    complement(199258..199779)
FT                   /note="HMMPfam hit to PF02776, Thiamine pyrophosphate
FT                   enzyme, N-terminal TPP binding domain, score 2.8e-44"
FT   CDS             complement(199848..200813)
FT                   /transl_table=11
FT                   /locus_tag="BPP0830"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3454"
FT                   /db_xref="GOA:Q7W168"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W168"
FT                   /protein_id="CAE40239.1"
FT                   /translation="MQRIFEKAALALALVAMPLWAGVACAQQPLRMMVGFPPGGTTDVI
FT                   ARLVAQRLGGELSRSVVVENRAGASGNLAAATVAKADPDGSTLLFAPSSHATNASLYTN
FT                   QSFDTVKSFRAVGMVAVTPYVLVVNPGMQATNLRDFVDYLKRNPGKVEFASASPGTGQH
FT                   LAAELFKDEAGVDIMHVPYKGSAAALPDLIAGRVPMMFDNIAVMLPHIQQGTVRPLAIT
FT                   SKTRSRFLPDTPTMAESGYPDFEVLGWFTLLAPAKTPDATVQAYNDALKKISADPDFVA
FT                   QLAKLGGEAVARTPAQADAYIAEEVDKWGKVIRTAHINLN"
FT   misc_feature    complement(199860..200681)
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 1.2e-107"
FT   misc_feature    complement(200736..200813)
FT                   /note="Signal peptide predicted for BPP0830 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.998) with cleavage site
FT                   probability 0.798 between residues 26 and 27"
FT   misc_feature    complement(200739..200771)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(200868..201650)
FT                   /transl_table=11
FT                   /locus_tag="BPP0831"
FT                   /product="putative taurine dioxygenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3455"
FT                   /db_xref="GOA:Q7W167"
FT                   /db_xref="HSSP:1GY9"
FT                   /db_xref="InterPro:IPR003819"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W167"
FT                   /protein_id="CAE40240.1"
FT                   /translation="MLVFPGQDLNAPQLIDFTRHFGDVERNDSVPYYRDPDYPEVLLVT
FT                   NKPRDGKPLQTRNTGRNWHSDLSYTDRPAKGSVLMCKEKPPVGGDTMFANMYQAYESLS
FT                   APFKRFVDGLHAVHDISLIKGFDRRDPEQTAALKRRNPPIAHPVVRIHPETGRKCLFVS
FT                   DRVRTFVGMTEEESRPILDFLNRHATSPEFVYRHRWSVNDIVMWDNRCTLHIALPDFDQ
FT                   SKPRHMMRCSMLGEPSGYVIEDAPLDEQAARSAIAAVS"
FT   misc_feature    complement(200922..201650)
FT                   /note="HMMPfam hit to PF02668, Taurine catabolism
FT                   dioxygenase TauD, TfdA family, score 2.4e-31"
FT   CDS             complement(202083..204371)
FT                   /transl_table=11
FT                   /gene="maeB"
FT                   /locus_tag="BPP0832"
FT                   /product="NADP-dependent malic enzyme"
FT                   /EC_number="1.1.1.40"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3456"
FT                   /db_xref="GOA:Q7W166"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W166"
FT                   /protein_id="CAE40241.1"
FT                   /translation="MKDTDRQAALDYHAYPHPGKISVTATKPLVTQRDLSLAYSPGVAA
FT                   ACEEIVEDPANVFRYTGRGNLVGVITNGTAVLGLGNIGALASKPVMEGKAVLFKKFAGL
FT                   DVFDIEINETDPDKLVEIIAGLEATFGGINLEDIKAPECFTVERKLRERMKIPVFHDDQ
FT                   HGTAITVCAAVVNGLAVAGKRIEDVKLVTSGAGAAALACLDLLVDLGLPLEHIWVTDIE
FT                   GAVYQGRTALMDPDKARYAQPTEARTLAEVIEGADVFLGLSAGNVLKPEMVATMAANPL
FT                   ILALANPNPEILPEAAHAVRDDIIMATGRSDYPNQVNNVLCFPYIFRGALDVGATTITR
FT                   EMEKAAVLAIASLAREEQNEVVAAAYGTYDISFGRDYLIPKPFDPRLIVRIAPAVAKAA
FT                   MEGGVATRPIADLDAYAEQLQQFVYHSGAFMKPLFSQAKQIVRDGGRARIVFTEGEDER
FT                   VLRAVQVIVDEKVAKPILVGRPQVLLSRIEKFGLRLRLGQDVEVCNPEYDERFHQYWTT
FT                   YWELMCRNGITKEMARVEMRRRLTLIGAMMVHLGDADGMICGAVSGFHDHLRFIDQVIG
FT                   RKPGATTYAAMNILLLDERTVALVDTHVNEDPSAEQIAEYTVAAAEEMQRLGLAPKVAL
FT                   LSRSNFGSGSSASGAKMRHALELVNRQAPGLEIDGEMHGDCALDESLRLRLLPDSPLKG
FT                   SANLLVCPNVDSGNIAYNLLKTVAGKNVAVGPILLGANAPVHIVTSSATVRRIINMAAL
FT                   CVLDANRPQ"
FT   misc_feature    complement(202107..203090)
FT                   /note="HMMPfam hit to PF01515, Phosphate acetyl/butaryl
FT                   transferase, score 1e-105"
FT   misc_feature    complement(203145..204260)
FT                   /note="HMMPfam hit to PF00390, Malic enzyme, score
FT                   2.1e-194"
FT   CDS             204489..205484
FT                   /transl_table=11
FT                   /locus_tag="BPP0833"
FT                   /product="LysR family regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3457"
FT                   /db_xref="GOA:Q7W165"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W165"
FT                   /protein_id="CAE40242.1"
FT                   /translation="MILLRSVPMTGSPSVDAAEIVRRLTSRLKMRHLQLLLHVRQLGSL
FT                   TRVAQQLSTSQPAVTNALAELEDMFGAPLFQRTARGMTPTPLGLVVLARAEAIIHDLRH
FT                   LVDDMGASASGYTARLHLGVTPFVSSRLIAAAIGRAQRADHRLAASVHDGISGKLLAGL
FT                   RDHSLDVVVARAGPALDVEGIVFEPLYVQQPRLIASRRLAARLARRALDWSALAELDWI
FT                   LGVPQTAMRDQVASLFMQAGIRPPATTTECHSAKLIGELIAASDRALSIVPADIADELV
FT                   SVAGVAIVPFSFTWHLPPIAVFMRHESQGSAPHRLFAEALREECRHARAG"
FT   misc_feature    204576..204755
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 2.9e-20"
FT   misc_feature    204618..204710
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    204825..205466
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 1.2e-19"
FT   CDS             205737..206678
FT                   /transl_table=11
FT                   /locus_tag="BPP0834"
FT                   /product="binding-protein-dependent transport systems inner
FT                   membrane component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3458"
FT                   /db_xref="GOA:Q7W164"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W164"
FT                   /protein_id="CAE40243.1"
FT                   /translation="MLSYTLRRLLMTLPVMLFVALFVFGLLDLAPGDPAALLAGEDATP
FT                   QDIARIRATLGLDQPFLQRFAEWGWNVLHGDLGTSLFTGLPVSHMIGQRLVPTFSLMLM
FT                   TLLVSVVIAIPIGALAAWKHNRLQDRGIMVLAVFSFSVPSFAVGYLLAWIFGLQLRWFP
FT                   VQGYVPLATGFWASVHTLVLPALALGSVYVALITRITRATLLETLSQDYIRTARAKGVG
FT                   NRGLLFRHALKNAAVPIITVIGSGVALLISGTVVTETVFSIPGLGRLVVDAILRRDYPV
FT                   IQGVILLFSFMYVLVNLLVDLLYRAFDPRIKY"
FT   misc_feature    205737..205853
FT                   /note="Signal peptide predicted for BPP0834 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.977) with cleavage site
FT                   probability 0.590 between residues 39 and 40"
FT   misc_feature    join(205761..205829,206031..206099,206136..206204,
FT                   206247..206315,206451..206519,206577..206645)
FT                   /note="6 probable transmembrane helices predicted for
FT                   BPP0834 by TMHMM2.0 at aa 9-31, 99-121, 134-156, 171-193,
FT                   239-261 and 281-303"
FT   misc_feature    206346..206561
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 1.2e-06"
FT   misc_feature    206349..206435
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   CDS             206678..207511
FT                   /transl_table=11
FT                   /locus_tag="BPP0835"
FT                   /product="binding-protein-dependent transport systems inner
FT                   membrane component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3459"
FT                   /db_xref="GOA:Q7W163"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W163"
FT                   /protein_id="CAE40244.1"
FT                   /translation="MSNIAGFLKRHPTTAVGGGLLLLLFLMAVCAPWLGTVDPTALSPI
FT                   HRTRAPSEQFWFGTDLLGRDVYSRVIYGARVSLIVGFTVAALSTVIGVVIGLAAGFVRW
FT                   VDAVVMRIMDGFMSIPTILLAIALIALTRASLQNVIIAITIAEVPRVVRLVRGLVLSLR
FT                   EQPYVEAAVAAGASRLRIVARHIFPNTLAALMVQATYICGVAILAEASLSFIGAGVPPS
FT                   VPSWGNIMAEGRALWQIKPHLIAFPAVFLSITILAINMLGDGLRDAVDPRMAKRI"
FT   misc_feature    206678..206770
FT                   /note="Signal peptide predicted for BPP0835 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.747) with cleavage site
FT                   probability 0.319 between residues 31 and 32"
FT   misc_feature    join(206720..206788,206906..206974,207002..207070,
FT                   207233..207301,207404..207472)
FT                   /note="5 probable transmembrane helices predicted for
FT                   BPP0835 by TMHMM2.0 at aa 15-37, 77-99, 109-131, 186-208
FT                   and 243-265"
FT   misc_feature    207152..207382
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 2.3e-08"
FT   misc_feature    207155..207241
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   CDS             207515..209365
FT                   /transl_table=11
FT                   /locus_tag="BPP0836"
FT                   /product="ABC transporter ATP-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3460"
FT                   /db_xref="GOA:Q7W162"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W162"
FT                   /protein_id="CAE40245.1"
FT                   /translation="MTTTTTQSRRVLELENLSIAFGRGAHTFHAVKSLSLHVDRGETLA
FT                   IVGESGSGKSVTSLAVMRLVEFGGGRIESGRMTFYRGAGEAVDLAAASEDSMRAMRGND
FT                   LGMIFQEPMTSLNPVFTVGAQIVEAIRLHQACDARAAQAAAKRILDQVRIPDSASILGR
FT                   YPHELSGGMRQRVMIAMALSCKPALLIADEPTTALDVTIQAQILQLIRELQREMDMGVI
FT                   FITHDMGVVAEVADRVLVMRKGDVVENNDVHGLFNAPSHPYTKALMAAVPRLGAMQGTT
FT                   APARFALLSDAQARHEAEPPAVAPSDKVVLRVRDLVTRFDVRGGIFARVKKRVHAVEQV
FT                   SFDLHAGETLSLVGESGCGKTSTGRSLLRLAKTTRGQIEFDGKPVRQEDPASLRALRRN
FT                   MQFVFQDPFASLNPRMRVGDCVKEPMLIHNLYSGAQADRRAAELFERVGLDAAMMQRWP
FT                   HEFSGGQRQRICIARALSVDPKVLIADESVSALDVSIQAQIVNLLIDLQRDLGVSYLFI
FT                   SHDMAVVERISHRVAVMYLGQIVEIGPRQAIFENPQHPYTKKLMQAVPIADPGARRSIT
FT                   LELSELPSPARPVGDEPVVKPLEQVGPGHFVARHRIGGAY"
FT   misc_feature    207635..208246
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   1.3e-52"
FT   misc_feature    207656..207679
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    208016..208060
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    208553..209125
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   7e-58"
FT   misc_feature    208574..208597
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    208895..208939
FT                   /note="PS00211 ABC transporters family signature."
FT   CDS             join(209434..210849,210849..211025)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0837"
FT                   /product="bacterial extracellular solute-binding protein
FT                   (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3461"
FT                   /db_xref="PSEUDO:CAE40246.1"
FT   misc_feature    209434..209508
FT                   /note="Signal peptide predicted for BPP0837 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.994 between residues 25 and 26"
FT   misc_feature    join(209443..210849,210849..211018)
FT                   /note="This hit extended beyond the end of the feature by 0
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00496, Bacterial extracellular
FT                   solute-binding proteins, family 5, score 4e-15"
FT   variation       210850
FT                   /note="(T)1 in parapertussis; (T)2 in pertussis"
FT   CDS             join(211044..212186,212188..212580)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0838"
FT                   /product="conserved hypothetical protein (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3462"
FT                   /db_xref="PSEUDO:CAE40247.1"
FT   variation       212179..212188
FT                   /note="(CG)5 in parapertussis; (CG)6 in pertussis"
FT   CDS             complement(212674..213615)
FT                   /transl_table=11
FT                   /locus_tag="BPP0839"
FT                   /product="LysR family regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3463"
FT                   /db_xref="GOA:Q7W161"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W161"
FT                   /protein_id="CAE40248.1"
FT                   /translation="MLNTALRYFLEVVDAGSLTLAAQKLHVAPSAVSRMVRKLEDEHQA
FT                   QLFERHARGMVLTEAGQLLKAYARRASLDAERARAEIRELSQIGQKLIRVSANQAFGRE
FT                   LLPRVIGEFREIEPTVRFELNILQSSEINRRVREGEDDIGLSYNLAPPQDVHVQYARRM
FT                   PLFAVMAPQHPLAGRDMLSMQDIGDYPVVLMGPGSTNRFFIDLCCMHEKIELNIAMTCN
FT                   NQGAIQTCCQQWGAISFSGDLTVMTPTERGELVSIPMANSELHQRIMHIQTMAGRQLPA
FT                   SVGRFVQALASRIDASYADPAWLAAGRGSGAL"
FT   misc_feature    complement(212731..213360)
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 1.2e-31"
FT   misc_feature    complement(213430..213609)
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 3.3e-23"
FT   CDS             213685..214524
FT                   /transl_table=11
FT                   /locus_tag="BPP0840"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3464"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W160"
FT                   /protein_id="CAE40249.1"
FT                   /translation="MIAPPLARHARVCRWPRRAISIYIRMIKKRYLATAVVALAVAVAA
FT                   ALYARQDEPEHFDEVVLQCLDDQAMSTVRRTGSVDGILPACQPELAEVLGEDFGAVDEP
FT                   TLRAVLATVAAANFAEYGSSSAVAYEAIEKSQHLNCGNLVFLMGYLYGGLKEKGIRPIG
FT                   VDGGAVGNHAQIMYKSGNNRLLLDPTTGVVAAITFNKLMSGQPVPEEQVRVFRVKAKTI
FT                   DSFRDRVYRAVVGGGYLPSDLMYMHESLWELKTKGSSSVYFTPGGITVRKKLAQAAG"
FT   misc_feature    213685..213831
FT                   /note="Signal peptide predicted for BPP0840 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.997) with cleavage site
FT                   probability 0.495 between residues 49 and 50"
FT   misc_feature    213775..213828
FT                   /note="1 probable transmembrane helix predicted for BPP0840
FT                   by TMHMM2.0 at aa 31-48"
FT   CDS             complement(join(214585..214782,214782..215087))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0841"
FT                   /product="conserved hypothetical protein (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3465"
FT                   /db_xref="PSEUDO:CAE40250.1"
FT   variation       complement(214784..214791)
FT                   /note="(CCGG)2 in parapertussis; (CCGG)3 in pertussis"
FT   CDS             complement(215084..215422)
FT                   /transl_table=11
FT                   /locus_tag="BPP0842"
FT                   /product="putative ArsR family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3466"
FT                   /db_xref="GOA:Q7W159"
FT                   /db_xref="InterPro:IPR001845"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W159"
FT                   /protein_id="CAE40251.1"
FT                   /translation="MPNQAAQLSQVFQALSDPTRRAVLERLCQGSAAMSELARPFNMAL
FT                   PSFSQHLDVLERCGLVRSRKSGRVRIYTLAPQPLGMAEHWMTRQRAIWERRLDQLDLYL
FT                   QDLKEQKR"
FT   misc_feature    complement(215144..215389)
FT                   /note="HMMPfam hit to PF01022, Bacterial regulatory
FT                   protein, arsR family, score 1.1e-11"
FT   CDS             215851..218370
FT                   /transl_table=11
FT                   /locus_tag="BPP0843"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3467"
FT                   /db_xref="InterPro:IPR007844"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W158"
FT                   /protein_id="CAE40252.1"
FT                   /translation="MKTWFKRIVIGLVVLVVVAVVGLAIFLLTFDPNAYKYKLEEAVQA
FT                   RYERTLNIEGEIELSLFPRIGLAVQGVSLSEPNSPDVFASIDSMRLAVAVWPLLSNSLV
FT                   VDHVTINGFKARVIRGKDGHFNFENLVGGSVQSTDVPGNAAEATAGAITGTAQAIVNGT
FT                   VSTPKSMQIDIAGLDLKDGEIQLQDAMSGMAVAITKLNAATGRVTYNQPFDVSLSARVE
FT                   GGNPRVDAGLTGQAQLTLDPLAKRYAAQRLDLRMEGRLPGAQAKSLAARGNVAFNGMTS
FT                   SLDVAGLEILFQGDIVDTATKLTNVEASVAMPKLAVDPHKTELQIDKLAVRAKGAMPGG
FT                   PFELAVDAPALNISPTNASGDALSGRVRTQELDASFGLNGISGNAGELDIKEAKLDSTL
FT                   KQGERVVKSAFASPVTLNLLQRSIGLSALKGDVNITDPGLPKGSLQIPVIGSVNANLLK
FT                   DQANARINAVLEGGKFDLSADIVALSAVPRVTFALAVDTLDLDKLAPPAGASAPPKPAG
FT                   DGKQDESKPPAKPQPAPAPAAADDSINLSGLVGPTASGTIKIGQLVMRGLKAEQVAANI
FT                   KLEKGKLDISTLTAALYGGKLGGVMSVDAVNGNQLVAKMSLAGIAIQPLLSDLAGKDTL
FT                   SGTGSLAFDLKTAGANTYAMKSGLAGTMQVRLRDGAIKGINVAQTLRELKAMFRGEAHD
FT                   PTVQDDQTRQTDFTSLESDLVFNKGVATVKRLDMAAPLLRVNQGNPANIDFVRSELDFV
FT                   ARVRVVNTSTGQDGKDLAELRNLTIPLLITGPFDKPVYTLQWREVAGEALKRGLEKQLK
FT                   EALTGGEGASGSPAKNIDKALKGILGK"
FT   misc_feature    215851..215907
FT                   /note="Signal peptide predicted for BPP0843 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.978) with cleavage site
FT                   probability 0.261 between residues 19 and 20"
FT   misc_feature    217912..217983
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1."
FT   CDS             218367..218753
FT                   /transl_table=11
FT                   /locus_tag="BPP0844"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3468"
FT                   /db_xref="InterPro:IPR005303"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W157"
FT                   /protein_id="CAE40253.1"
FT                   /translation="MSTTAYQPIAECGATTQSEAAAYQKRWLVANDAGQWLNRDLCPRL
FT                   AEVSVELRMGYLVLKAPGMLRLDIPLDVIEDDDSVRYQMLVGEQTVDVVDEGELAAAWI
FT                   SNHVGVPCRILKVHPDMAEVRWPS"
FT   CDS             complement(218761..219978)
FT                   /transl_table=11
FT                   /locus_tag="BPP0845"
FT                   /product="putative transport protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3469"
FT                   /db_xref="GOA:Q7W156"
FT                   /db_xref="InterPro:IPR004711"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W156"
FT                   /protein_id="CAE40254.1"
FT                   /translation="MNGADSASSPLAARRPVTGALSLSAIVAGLVAVLVSFGGTAVLMV
FT                   QAGHAAGLDAARIGSWLGSICLALGVGGALISLRSRMPVVFAWSTPGAALLVTGLVGVP
FT                   FDQAVGAFVLAAALTLACGVFGWIDPIVRRIPAELAAAMLAGVLLNFGMGIFGSIAAQP
FT                   VLVLSMCAAYLLGRRWAPRFAVLAVLVVGLAAASSLDLLRLGHVQWAWTEFVWTTPSFT
FT                   WQAAISLGIPLFVVAMASQNLPGLAILQAAGYRPPASRLVGLTGLAGLLAAPFGAHSVT
FT                   LGAIIAALCAGPEAHADPGRRYVAAATYGLTYVLLSVAAGAVAVFFQALPGALIAALAG
FT                   LALLGAIMGGMTTAMADPQRREAALVTLLATASGISFWGIGSAFWGLAAGLATHGALAW
FT                   RRARSA"
FT   misc_feature    complement(218791..219924)
FT                   /note="HMMPfam hit to PF03594, Benzoate membrane transport
FT                   protein, score 5.2e-157"
FT   misc_feature    complement(join(218821..218886,218926..218991,
FT                   219004..219069,219109..219174,219235..219300,
FT                   219364..219429,219496..219561,219598..219654,
FT                   219670..219726,219748..219804,219850..219915))
FT                   /note="11 probable transmembrane helices predicted for
FT                   BPP0845 by TMHMM2.0 at aa 21-43, 58-77, 84-103, 108-127,
FT                   139-161, 183-205, 226-248, 268-290, 303-325, 329-351 and
FT                   364-386"
FT   misc_feature    complement(219829..219978)
FT                   /note="Signal peptide predicted for BPP0845 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.678) with cleavage site
FT                   probability 0.546 between residues 50 and 51"
FT   CDS             complement(219975..220226)
FT                   /transl_table=11
FT                   /gene="fdx"
FT                   /locus_tag="BPP0846"
FT                   /product="ferredoxin"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3470"
FT                   /db_xref="GOA:Q7W155"
FT                   /db_xref="HSSP:1BLU"
FT                   /db_xref="InterPro:IPR017900"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W155"
FT                   /protein_id="CAE40255.1"
FT                   /translation="MALKITEECINCDVCEPQCPNEAISMGADYYVIDPDRCTECVGHH
FT                   DEPQCKVVCPVECIELHPQWQEGQEQLMAKYRRLTGAA"
FT   misc_feature    complement(220047..220136)
FT                   /note="HMMPfam hit to PF00037, 4Fe-4S binding domain, score
FT                   0.13"
FT   misc_feature    complement(220152..220223)
FT                   /note="HMMPfam hit to PF00037, 4Fe-4S binding domain, score
FT                   0.00024"
FT   misc_feature    complement(220167..220202)
FT                   /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding
FT                   region signature."
FT   CDS             complement(220281..220790)
FT                   /transl_table=11
FT                   /gene="coaD"
FT                   /gene_synonym="kdtB"
FT                   /locus_tag="BPP0847"
FT                   /product="phosphopantetheine adenylyltransferase"
FT                   /EC_number="2.7.7.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3471"
FT                   /db_xref="GOA:Q7W154"
FT                   /db_xref="HSSP:1B6T"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W154"
FT                   /protein_id="CAE40256.1"
FT                   /translation="MIIAVYPGTFDPLTRGHEDLVRRAATLFDKVVVGIAHSRNKKPFF
FT                   TIEERVDIAREVLGHYPNVEVHSFGGLLKDFVRDQNGRVIIRGLRAVSDFEYEFQMAGM
FT                   NRHLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVERWLQAKAKERREQ
FT                   SAQGGA"
FT   misc_feature    complement(220392..220790)
FT                   /note="HMMPfam hit to PF01467, Cytidylyltransferase, score
FT                   1.4e-38"
FT   CDS             complement(220811..221431)
FT                   /transl_table=11
FT                   /locus_tag="BPP0848"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3472"
FT                   /db_xref="GOA:Q7W153"
FT                   /db_xref="InterPro:IPR016065"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W153"
FT                   /protein_id="CAE40257.1"
FT                   /translation="MKPSRPGSKPIRIVGGLYRRTLIPVADAPGLRPTPDRVRETLFNW
FT                   LNHLWGGEFADKRVLDLFAGSGALGFEAASRGAGQVQMVERDRGAAAALRTLRDKLQAG
FT                   AVRIHAGDAMQVIERMDASRFDLVLLDPPFGQGWLERLWPLLPAVLAEDGLVYVESETA
FT                   PAPPAGFELLREGKAGAVHYRLFQFAAMRKSMNNPALEDGASH"
FT   misc_feature    complement(220871..221401)
FT                   /note="HMMPfam hit to PF03602, Conserved hypothetical
FT                   protein 95, score 1.4e-56"
FT   misc_feature    complement(221030..221050)
FT                   /note="PS00092 N-6 Adenine-specific DNA methylases
FT                   signature."
FT   CDS             221639..222706
FT                   /transl_table=11
FT                   /gene="ftsY"
FT                   /locus_tag="BPP0849"
FT                   /product="cell division protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3473"
FT                   /db_xref="GOA:Q7W152"
FT                   /db_xref="HSSP:1OKK"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W152"
FT                   /protein_id="CAE40258.1"
FT                   /translation="MPAPQPEPQPEPQPQQPPEPAPPAMASPPVAESQPPVAEPQPPVA
FT                   AAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEK
FT                   LLAALRARVKKERIDDPAQVKTALRQLLADHLWPLERSFDLGRAQPLVVMIAGVNGAGK
FT                   TTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFD
FT                   SVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQ
FT                   NALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDL
FT                   QPFVADEFAAALLAD"
FT   misc_feature    221804..222049
FT                   /note="HMMPfam hit to PF02881, SRP54-type protein, helical
FT                   bundle domain, score 1.2e-12"
FT   misc_feature    222080..222700
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00448, SRP54-type protein, GTPase
FT                   domain, score 7.5e-97"
FT   misc_feature    222107..222130
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(222753..224351)
FT                   /transl_table=11
FT                   /locus_tag="BPP0850"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3474"
FT                   /db_xref="GOA:Q7W151"
FT                   /db_xref="InterPro:IPR007899"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W151"
FT                   /protein_id="CAE40259.1"
FT                   /translation="MSEQELKLHVPAAARAAVQQQIQQRQAARIRLHAMYFDTPGRELA
FT                   RARIAIRLRQEGRDWVQTLKMPGANAISRVEINHPRPGPVLDLSVYAGTEAQAALTAIK
FT                   GELGLRYETDVQRLFCKVRGRHGTVELAYDTGVLRAGALELPISELEFELVSGRPAAIF
FT                   AMARSWLQRHGLVLDARSKSERGDALAQLAHDLAAAPGEADDAARATRDQQAVAGFWAP
FT                   RNAGAVKLDESMTPMQAMAAVAAECVDHIARNAAVLAEVDTLGVYRAGTPEHVHQLRVG
FT                   VRRLRSAWRLFDGWIADPSETLAQGARTHFSAFGMARDQDVLADTIMPLLARAGMPALP
FT                   AEAAPSNDNAQSLAADRAFQGWLLELLAWSLDVPPPPAPAATAEAAPASPTIIPLAPPA
FT                   EAAPPALRKRLTGRLRRWHLKVIDEGLRFGALELEARHELRKRVKRLRYGLSFAESLLP
FT                   AARLRTYRKQLARVQDLLGEINDLAVARDYYQAALQAHPQAWFAVGWIGARLDGLTPQA
FT                   QEAFDQLAHAKPFWK"
FT   CDS             complement(224590..225411)
FT                   /transl_table=11
FT                   /locus_tag="BPP0851"
FT                   /product="binding-protein-dependent transport system
FT                   permease protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3476"
FT                   /db_xref="GOA:Q7W150"
FT                   /db_xref="InterPro:IPR005769"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W150"
FT                   /protein_id="CAE40260.1"
FT                   /translation="MNTSVTSLEPGHPRTWQRYSGGQKALRFMLYLLLVAAIVQAVRSV
FT                   EVIPEFLYDAPEQMADLLRRMWPIDWSYYPEGVHAALVETLHIATLGTILSVGMAVPVG
FT                   LLAANNLTPSRTINMLARLILVSSRSVNSLVWALLFIAIFGPGALAGTLAIAFRSIGFV
FT                   GKLVGEAIEEAQRGPIEALTATGASKAAVLWYGYWPQIRPSFWSIVLLRWDINVRESAV
FT                   LGLVGAGGIGMALDTALNLFQWDRVALVLAAIFIVVVAAEIVITQARKRIL"
FT   misc_feature    complement(join(224614..224670,224686..224751,
FT                   224944..225009,225073..225138,225286..225336))
FT                   /note="5 probable transmembrane helices predicted for
FT                   BPP0851 by TMHMM2.0 at aa 25-42, 91-113, 134-156, 220-242
FT                   and 247-266"
FT   misc_feature    complement(224674..224904)
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 0.00032"
FT   CDS             complement(225408..226307)
FT                   /transl_table=11
FT                   /locus_tag="BPP0852"
FT                   /product="binding-protein-dependent transport systems inner
FT                   membrane component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3477"
FT                   /db_xref="GOA:Q7W149"
FT                   /db_xref="InterPro:IPR005769"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W149"
FT                   /protein_id="CAE40261.1"
FT                   /translation="MAGVTVRTANMARRPFSLSWRAKTGVLLVVLYTFYAAAQLDFSWA
FT                   RFETGLGHAATFLARMFPPNFEKPDTLWKGIAESLEIAVLASVLGILLSLPIGLLGARN
FT                   LMPAWASWPARALVALCRALHPVIVAILFVKAVGFGALAGILALTVASIGFIGKLFTEA
FT                   IEEISLKQVKAVRASGASFGNVIIFGVLPQVFARFVGFATYQFDSNLRNSTMVGIVGAG
FT                   GIGGTLFSAFQRFDYDFVAAILLTLIAIIMLGEILAGFVRKVFLDNMGFERILQRRFTA
FT                   ARGLGSTTPLARKGEVDE"
FT   misc_feature    complement(join(225525..225590,225612..225668,
FT                   225699..225764,225828..225893,225906..225962,
FT                   226002..226067,226191..226256))
FT                   /note="7 probable transmembrane helices predicted for
FT                   BPP0852 by TMHMM2.0 at aa 17-39, 80-102, 115-134, 138-160,
FT                   181-203, 213-232 and 239-261"
FT   misc_feature    complement(225609..225821)
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 0.0023"
FT   CDS             complement(226295..227065)
FT                   /transl_table=11
FT                   /locus_tag="BPP0853"
FT                   /product="putative transport system ATP-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3479"
FT                   /db_xref="GOA:Q7W148"
FT                   /db_xref="HSSP:1F3O"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W148"
FT                   /protein_id="CAE40262.1"
FT                   /translation="MATSLRITGLVKEYRAGKPVLNGIDLDIAGQGLTAIIGPSGTGKS
FT                   TLLRCINRLIEPTSGEIVLKDAEGTVDLARVRGQSLRRARRRIGMVFQEYNLVERLTVM
FT                   ENLLTGRLGYTSALNAWMRRFDPADIERAFQLLDTVGLAGFADQRADALSGGQRQRVGI
FT                   ARALMQRPQLLLADEPTSSLDPKTSVEIMKLLTEQGSVNGIPVLVNIHDVELARRYANR
FT                   IVGMSGGHVVYDGDGKGLDATMLKTIYGGESWLE"
FT   misc_feature    complement(226379..226975)
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   6.1e-55"
FT   misc_feature    complement(226565..226609)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(226931..226954)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(227068..228075)
FT                   /transl_table=11
FT                   /locus_tag="BPP0854"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3481"
FT                   /db_xref="GOA:Q7W147"
FT                   /db_xref="InterPro:IPR005770"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W147"
FT                   /protein_id="CAE40263.1"
FT                   /translation="MRAKRLLQAAAVTALIFGSYAAQAADAACSNRGDLDNMYCDANKD
FT                   LVADTPTDKSKLKTPSTLVFTYTPVEDPAVYEDIFKPFTKHLSECTGKRVVFYQVQSNA
FT                   AEIEAMRSGRLHVGGFSTGPTAFAVNIAGAVPFAVKGYADEFQGYNLIVIVKKDSPYQK
FT                   LTDLKGKKLAHTAPSSNSGHMAPVALFPKEGLTPDKDYKVIFSGKHDQSVMGVNSGDYD
FT                   AAAVASDVFKRMAERGQVKEEDFRVIYRSEKFPTSSFAYAHDLEPAFRDKMLKCFYDYR
FT                   FPDEMKKAFDGADRFYPVTYQKDWAIVREVAESGGEKFNRAAYDRETAKSKGKQ"
FT   misc_feature    complement(228004..228075)
FT                   /note="Signal peptide predicted for BPP0854 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.923 between residues 24 and 25"
FT   CDS             complement(228224..229051)
FT                   /transl_table=11
FT                   /locus_tag="BPP0855"
FT                   /product="putative transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3482"
FT                   /db_xref="GOA:Q7W146"
FT                   /db_xref="InterPro:IPR005471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W146"
FT                   /protein_id="CAE40264.1"
FT                   /translation="MSAAKSTAKPAAAPGNDGRRSIQSVEVGFPLLAALVDAGRPLTLR
FT                   DLAGAAGMTSAKAHPYLVSFTRVGLVQQDTVTGQYELGPFALQMGLVSLQRLDPVRVAL
FT                   PEVDKLQSEIGHTLGIAVLGSHGPTMIHITEASYPVHVNMRKGTVMSMLHTATGQVFAA
FT                   WLPPKMAEHYIAREDGDAAVIASLTPRKTTRANLDAMLADIRVHGMARALGSPLPGVDA
FT                   LSVPVFDHTGGIVLALTSLGPTGLFDASFTGAIARPLLACAQEISRKLGYRGN"
FT   misc_feature    complement(228245..228814)
FT                   /note="HMMPfam hit to PF01614, Bacterial transcriptional
FT                   regulator, score 8.1e-11"
FT   CDS             complement(229057..229854)
FT                   /transl_table=11
FT                   /locus_tag="BPP0856"
FT                   /product="haloacid dehalogenase-like hydrolase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3483"
FT                   /db_xref="GOA:Q7W145"
FT                   /db_xref="InterPro:IPR006379"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W145"
FT                   /protein_id="CAE40265.1"
FT                   /translation="MQALAAMPAPVAASVRIVLTDIDDTLTTEGRLPAGAYAALERLEQ
FT                   AGIVVVPITGRPAGWCDHIARMWPVRAVVGENGAFYYAYDRSARRMNAHYWADAATRAA
FT                   NRQALQAIRERVLREVPGTAVASDQDYRVADLAIDFCEDVPALPDGAVGRIVEIFHEAG
FT                   AQAKVSSIHVNGWFGDYDKLTMTRTLFEREFGLNIDSALQHTLFIGDSPNDEPMFKFFP
FT                   ISVGVANIQSQLHRIQHRPAFVAAARGGDGFVEMAERLLANRG"
FT   misc_feature    complement(229162..229812)
FT                   /note="HMMPfam hit to PF00702, haloacid dehalogenase-like
FT                   hydrolase, score 0.011"
FT   CDS             229853..231175
FT                   /transl_table=11
FT                   /gene="ribB"
FT                   /locus_tag="BPP0857"
FT                   /product="putative 3,4-dihydroxy-2-butanone 4-phosphate
FT                   synthase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3484"
FT                   /db_xref="GOA:Q7W144"
FT                   /db_xref="HSSP:1G58"
FT                   /db_xref="InterPro:IPR000926"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W144"
FT                   /protein_id="CAE40266.1"
FT                   /translation="MGLLEGICRYRGAILKREVYRARAARRRAGRDRAKGAKIAAFQPG
FT                   RARFMSAQISSLNAGAAPESFGIASVPEIIAELRAGRIVILVDEEDRENEGDLVMAAEF
FT                   VTPEAINFMVTHGRGLVCLTLTEERCRQLDLPLMASRNGTRYGTNFTQSIEAAEGVETG
FT                   ISAADRARTIQVAVARDAQPSDLVQPGHIFPVRAVPGGVLVRAGHTEAGCDLTAMGGLT
FT                   PAAVICEILKPDGTMARLPDLVEFAREHKLKIGTIADLIQYRSEHESIIARMGERMMQT
FT                   PWGDFRCIAYRDDATRSPHLALVHGNIDPERETLVRVHEPASLLDVLDTGASPHSWSVG
FT                   QALHAIAASPAGVLVLMNCQSSTEHLFGQIANWAGPAERAAAQEGDRFGLRTYGIGAQI
FT                   LRDLNVGRMKLLARPRKMPSMAGFALTITGYDCAPPNLRND"
FT   misc_feature    230063..230650
FT                   /note="HMMPfam hit to PF00926, 3,4-dihydroxy-2-butanone
FT                   4-phosphate synthase, score 4e-111"
FT   misc_feature    230657..231151
FT                   /note="HMMPfam hit to PF00925, GTP cyclohydrolase II, score
FT                   9.2e-08"
FT   CDS             231189..231716
FT                   /transl_table=11
FT                   /gene="ribH"
FT                   /locus_tag="BPP0858"
FT                   /product="putative 6,7-dimethyl-8-ribityllumazine synthase"
FT                   /EC_number="2.5.1.9"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3485"
FT                   /db_xref="GOA:Q7W143"
FT                   /db_xref="InterPro:IPR002180"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W143"
FT                   /protein_id="CAE40267.1"
FT                   /translation="MNPYILTPDLNGEGLHIGIVRARFNEEIGQAQLQACLEELGKLGV
FT                   DERDVMVVSVPGALELGVALARMAESYEFDALIALGAVIRGETYHFEVVSNESAAAISR
FT                   IALETGIPVANGVLTVDTDEQAQARAAGKGADCAQVAVEMANLAAALEPEEDDEDEDDE
FT                   DEDFDDEEDDGR"
FT   misc_feature    231222..231641
FT                   /note="HMMPfam hit to PF00885,
FT                   6,7-dimethyl-8-ribityllumazine synthase, score 1e-43"
FT   CDS             231724..232188
FT                   /transl_table=11
FT                   /gene="nusB"
FT                   /gene_synonym="ssyB"
FT                   /locus_tag="BPP0859"
FT                   /product="N utilization substance protein B"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3486"
FT                   /db_xref="GOA:Q7W142"
FT                   /db_xref="InterPro:IPR006027"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W142"
FT                   /protein_id="CAE40268.1"
FT                   /translation="MQARANARSARRRAREFALQGVYAWLLRGGEGTQDAGEIDAHLRD
FT                   AEDFSEADAQWFKTLLHGVLREAPVLRERFLPYIDRPLAELSPVEHGILLIGSFELMHH
FT                   VEVPYKVAINEAVELAKSFGGTDGFKFVNGVLDKLAADVRTAEVQAAPRR"
FT   misc_feature    231757..232152
FT                   /note="HMMPfam hit to PF01029, NusB family, score 7.1e-21"
FT   CDS             232228..233244
FT                   /transl_table=11
FT                   /gene="thiL"
FT                   /locus_tag="BPP0860"
FT                   /product="putative thiamine-monophosphate kinase"
FT                   /EC_number="2.7.4.16"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3487"
FT                   /db_xref="GOA:Q7W141"
FT                   /db_xref="InterPro:IPR006283"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W141"
FT                   /protein_id="CAE40269.1"
FT                   /translation="MLAGVALASEFDLIARYFTRPAPDGVLGVGDDCALFPVPPGQQVA
FT                   TSTDLLIEGRHFFPDVDPQALGHKALAVNLSDLAAMGARPVGCLLGLALPGVDEAWLAA
FT                   FARGFQALADTHACPLIGGDTTRAPQRLLAISVTVFGAVAPGHALRRAAAQPGDDVWVS
FT                   GELGAADIAYRLLDRQLPADPLRLAATRAALEWPRPRVELGMALAGLARAGIDISDGLL
FT                   QDLGHILAASGVAAELRYDALPVAAALAGLPAETVRRAALGGGDVYELCFTADPAHRQA
FT                   IGQAAHGAGAPVSRIGRILAGQGLRVLDADGAPLGELPGGFDHFSDATDQPAPGRRP"
FT   misc_feature    232687..233157
FT                   /note="HMMPfam hit to PF02769, AIR synthase related
FT                   protein, C-terminal domain, score 0.003"
FT   CDS             233241..233783
FT                   /transl_table=11
FT                   /locus_tag="BPP0861"
FT                   /product="putative phosphatidylglycerophosphatase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3488"
FT                   /db_xref="GOA:Q7W140"
FT                   /db_xref="InterPro:IPR007686"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W140"
FT                   /protein_id="CAE40270.1"
FT                   /translation="MNPPDANPDPTSMQARTRVSYPSWSWVRARPARLLAFGLGSGLLR
FT                   PASGTWGTLLAWLSWFVFAPLAPDWALGMGIAAAFAYGCLACGQAGRELGVSDHVGMVW
FT                   DEIVAFWLVLWLVPQTVAAQALAFVLFRVFDIAKPPPIKYFDARIKGGFGVMWDDIVAA
FT                   AYTLLVMAILVRMGVFT"
FT   misc_feature    join(233361..233429,233448..233516,233559..233627,
FT                   233694..233762)
FT                   /note="4 probable transmembrane helices predicted for
FT                   BPP0861 by TMHMM2.0 at aa 41-63, 70-92, 107-129 and
FT                   152-174"
FT   CDS             233780..234346
FT                   /transl_table=11
FT                   /locus_tag="BPP0862"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3489"
FT                   /db_xref="InterPro:IPR008136"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W139"
FT                   /protein_id="CAE40271.1"
FT                   /translation="MSLHDTQGRAGLAPTPLTAAAIQGLAEMVGEALLRRDWMMGTAES
FT                   CTGGLLAGAVTSVAGSSDWFERGFVTYSNAAKVAELGVSGETLDHYGAVSEPVALEMAN
FT                   GVLLATPSAQVGVSTTGIAGPGGATPGKPVGMVCFGFAMRAHGGITSRAITHVFPGDRA
FT                   QVRNASVEFALRGILEFLGEPVNRG"
FT   misc_feature    233843..234322
FT                   /note="HMMPfam hit to PF02464, Competence-damaged protein,
FT                   score 2.9e-62"
FT   CDS             complement(234485..235306)
FT                   /transl_table=11
FT                   /gene="pyrF"
FT                   /locus_tag="BPP0863"
FT                   /product="putative orotidine 5'-phosphate decarboxylase"
FT                   /EC_number="4.1.1.23"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3490"
FT                   /db_xref="GOA:Q7W138"
FT                   /db_xref="HSSP:1DVJ"
FT                   /db_xref="InterPro:IPR001754"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W138"
FT                   /protein_id="CAE40272.1"
FT                   /translation="MTFLKKLEHAWSASQSLLQVGLDPDPKRFPRELEGKPDAIFQFCR
FT                   DIVDATAPYACSFKPQIAYFAAHRAEDQLEALCQHIRAQHPDLPIVLDAKRGDIGSTAE
FT                   NYAREAFERYQAHALTVSPYMGLDSVEPYLAWGDRGVIVLCRTSNPGGSDLQFLKMADG
FT                   QPLYLHVAGLVADKWNANGQCGLVVGATFPNELAAVRQRIGDAVPLLVPGIGAQGGDIN
FT                   ATVQAGANSAGAGMMINSSRAILYASTGEDWRQAAGEAARGLRDAINAVRT"
FT   misc_feature    complement(234539..235261)
FT                   /note="HMMPfam hit to PF00215, Orotidine 5'-phosphate
FT                   decarboxylase / HUMPS family, score 1.5e-36"
FT   misc_feature    complement(234998..235039)
FT                   /note="PS00156 Orotidine 5'-phosphate decarboxylase active
FT                   site."
FT   CDS             complement(235314..236633)
FT                   /transl_table=11
FT                   /gene="ndh"
FT                   /locus_tag="BPP0864"
FT                   /product="putative NADH dehydrogenase"
FT                   /EC_number="1.6.99.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3491"
FT                   /db_xref="GOA:Q7W137"
FT                   /db_xref="InterPro:IPR013027"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W137"
FT                   /protein_id="CAE40273.1"
FT                   /translation="MTQTPNTGSPHRVVIVGGGAGGLELAAKLGRAHGRERVTLVDSRP
FT                   FHIWKPSLHEAAAGTLDIHQEGLSYLMLANMCNFTFAQGELQGIERERRQIQVGPVADP
FT                   SGQQVLPPRELSYDTLVLAMGSTSNFFNTPGAAEHAVTLDTTENAEQFRLTMLKAMVQV
FT                   DLRKVHDPSARLDLVIVGGGATGVELAVELIEASHVVSAYGLPNFRADRDLVITLVEGA
FT                   PRILSALPEKISRAAHARLTELGVRVETDCRVAEVGADHVVTADGRRFEATMCLWAAGI
FT                   EGPPLFRQLGLPLNRLGQLEVNERLESPDPHILALGDCCAAPWKDGRTVPARAQAAHQQ
FT                   ADYLARKLTARLRNAAEPTEAYAYHDHGSLVSLGQGSGVGSLMGKLAGRGLFVSGTLAR
FT                   LMYMSLHLMHHRAVLGISRTATLALARLLMRRTRPRVKLH"
FT   misc_feature    complement(235638..236600)
FT                   /note="HMMPfam hit to PF00070, Pyridine
FT                   nucleotide-disulphide oxidoreductase, score 1.3e-38"
FT   CDS             complement(236684..237082)
FT                   /transl_table=11
FT                   /gene="dgkA"
FT                   /locus_tag="BPP0865"
FT                   /product="putative diacylglycerol kinase"
FT                   /EC_number="2.7.1.107"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3492"
FT                   /db_xref="GOA:Q7W136"
FT                   /db_xref="InterPro:IPR000829"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W136"
FT                   /protein_id="CAE40274.1"
FT                   /translation="MAHTPHPSPFKSTGGLRRILNALRYSLQGLKAAIKYEAAFRQELV
FT                   LAILLVPAAFFLGRTTDEVFILIASVILVLVAELLNSAIEALADALSVETHPLLGRAKD
FT                   LGSAAVMLMLLFTLAVWVAVLISRFVLD"
FT   misc_feature    complement(join(236690..236755,236822..236887,
FT                   236909..236965))
FT                   /note="3 probable transmembrane helices predicted for
FT                   BPP0865 by TMHMM2.0 at aa 39-58, 65-87 and 109-131"
FT   misc_feature    complement(236702..237037)
FT                   /note="HMMPfam hit to PF01219, Prokaryotic diacylglycerol
FT                   kinase, score 2.1e-33"
FT   CDS             complement(237173..238063)
FT                   /transl_table=11
FT                   /gene="brkB"
FT                   /locus_tag="BPP0866"
FT                   /product="serum resistance protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3493"
FT                   /db_xref="GOA:Q7W135"
FT                   /db_xref="InterPro:IPR017039"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W135"
FT                   /protein_id="CAE40275.1"
FT                   /translation="MRLPRQIRLPHLRDIGALLTDSAREWSRHRASSKGAALSLYMVFS
FT                   LAPMLILVIAVAGAFFGEEAVRSELFSQVRDLTGERGAEVIQTVLASAHESGSGWLAAL
FT                   LSICVLVFSATTAFAELKASLDELWDVKEDKSGLQGLVRSRMLSFGLVLVLALFLLLSL
FT                   TLNAALGAAKGYYGDLWSTSAFAMAADWLSNLFSFAVVTALFAVVYKLLPSKRIPWLDV
FT                   IPGAIVTAALFLAGKWGIGLYLERGTAVSAYGAAGSLIALLLWIYYSAQIFFFGAVFTR
FT                   QFAERFGNLRRAAPA"
FT   misc_feature    complement(237203..237985)
FT                   /note="HMMPfam hit to PF03631, Ribonuclease BN-like family,
FT                   score 1.2e-79"
FT   misc_feature    complement(join(237236..237301,237332..237397,
FT                   237437..237502,237548..237613,237701..237766,
FT                   237884..237949))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BPP0866 by TMHMM2.0 at aa 38-60, 99-121, 150-172, 187-209,
FT                   222-244 and 254-276"
FT   CDS             join(238365..238661,238663..241407)
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="brkA"
FT                   /locus_tag="BPP0867"
FT                   /product="serum resistance protein (pseudogene)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3494"
FT                   /db_xref="PSEUDO:CAE40276.1"
FT   misc_feature    238365..238490
FT                   /note="Signal peptide predicted for BPP0867 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.649 between residues 42 and 43"
FT   variation       238656..238662
FT                   /note="(C)7 in parapertussis; (C)6 in pertussis"
FT   misc_feature    240172..241402
FT                   /note="This hit extended beyond the end of the feature by 0
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF03212, Pertactin, score 2.1e-240"
FT   CDS             complement(241509..243152)
FT                   /transl_table=11
FT                   /gene="cpn60"
FT                   /gene_synonym="groEL"
FT                   /gene_synonym="mopA"
FT                   /gene_synonym="groL"
FT                   /locus_tag="BPP0868"
FT                   /product="60 kDa chaperonin"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3495"
FT                   /db_xref="GOA:Q7W134"
FT                   /db_xref="InterPro:IPR002423"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7W134"
FT                   /protein_id="CAE40277.1"
FT                   /translation="MAAKQVLFADEARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFG
FT                   APTVTKDGVSVAKEIELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAVVQEGL
FT                   KYVAAGFNPIDLKRGIDKAVAAAVEELKKLSKPVTTSKEIAQVGSISANSDASIGQIIA
FT                   DAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINSPEKQVAALDDPYVLI
FT                   YDKKVSNIRDLLPVLEQVAKSSRPLLIIAEDVEGEALATLVVNNIRGILKTTAVKAPGF
FT                   GDRRKAMLEDIAILTGGTVISEETGMSLEKATLQDLGQAKRIEVAKENTTIIDGAGDGK
FT                   SIEARVKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDA
FT                   LHATRAAVEEGVVPGGGVALLRAKQAITGLKGDTADQNAGIKLILRAVEEPLRTIVTNA
FT                   GDEASVVVNTVLNGKGNYGYNAATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTA
FT                   EAAVVELMEDKPAAAPAMPGGMGGMGGMDF"
FT   misc_feature    complement(241578..243086)
FT                   /note="HMMPfam hit to PF00118, TCP-1/cpn60 chaperonin
FT                   family, score 4.2e-243"
FT   misc_feature    complement(241905..241940)
FT                   /note="PS00296 Chaperonins cpn60 signature."
FT   CDS             complement(243185..243472)
FT                   /transl_table=11
FT                   /gene="cpn10"
FT                   /gene_synonym="groES"
FT                   /locus_tag="BPP0869"
FT                   /product="10 kDa chaperonin"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3496"
FT                   /db_xref="GOA:P0A341"
FT                   /db_xref="HSSP:1HX5"
FT                   /db_xref="InterPro:IPR018369"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A341"
FT                   /protein_id="CAE40278.1"
FT                   /translation="MALRPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVVAVGP
FT                   GKKTEDGKILPVDLKAGDKVLFGKYAGQTVKVDGEELLVIREDEILAVIQ"
FT   misc_feature    complement(243191..243472)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00166, Chaperonin 10 Kd subunit,
FT                   score 2.5e-59"
FT   misc_feature    complement(243392..243466)
FT                   /note="PS00681 Chaperonins cpn10 signature."
FT   CDS             complement(243864..244493)
FT                   /transl_table=11
FT                   /locus_tag="BPP0870"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3497"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W133"
FT                   /protein_id="CAE40279.1"
FT                   /translation="MTHSKALLLVSMEPPAGMEAEFNDWYDTEHLPERAGLPGFETALR
FT                   YVCVAGWPRYLALYDLSNIEVLDDKPYQDVSGERFSPWSKRVLNRVRGQSRMAAQQVYP
FT                   RQAITQRAPRLLLLRFVGLTLQHEADLVSTLRSAFSNRAGVQQLRVYREPADNGPRFLA
FT                   LVEAHESFSHQEKTSGLGPYARHLDMINEYTPYWTRGALHGVYPES"
FT   CDS             complement(244490..245191)
FT                   /transl_table=11
FT                   /locus_tag="BPP0871"
FT                   /product="conserved hypothetical protein"
FT                   /EC_number="4.1.1.76"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3498"
FT                   /db_xref="GOA:Q7W132"
FT                   /db_xref="InterPro:IPR015942"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W132"
FT                   /protein_id="CAE40280.1"
FT                   /translation="MHKSHYQRFIMPTAIRIGVLIPENNTRVAEELPLWLPGCRLEVVK
FT                   IPRDKGLLNAAALPAYKENALALAREKLGTGDIDVVAYGCTAAGFLLGPVGDQELARQL
FT                   RENTGKPVATIASSMTSVLTQDGIRKVAVVTPYSDAVNAQLKGFISNAGIEIAAFDSLY
FT                   AKDVDELGRISAQAVSHIARQTMNDDCEAMFIACAQLPTFNVLHQLETEFGRPVYSSIQ
FT                   AMATQIQAIAS"
FT   misc_feature    complement(244916..244966)
FT                   /note="PS00606 Beta-ketoacyl synthases active site."
FT   CDS             complement(245240..245875)
FT                   /transl_table=11
FT                   /locus_tag="BPP0872"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3499"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W131"
FT                   /protein_id="CAE40281.1"
FT                   /translation="MTKALLLAMMTPPGDLEEEFNEWYDTEHFPRLSTVPGFDRSSRYV
FT                   AVKGWPKYVALYDLASVNALEHPQYTRAPGARFSPWAQRILTKLHGQYRFSGDQIYPGP
FT                   ALMGDRGRPLQVAVMRFREMPGAHEAALIEGLQAIVDSSEDLLQARVFRGSGPLQGDYI
FT                   ALVECRAHDPRIPVTASALGPAADHLDLMTFYIPYWRRGYVPSVFEAQ"
FT   CDS             complement(245919..247628)
FT                   /transl_table=11
FT                   /locus_tag="BPP0873"
FT                   /product="putative dehydrogenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3500"
FT                   /db_xref="GOA:Q7W130"
FT                   /db_xref="InterPro:IPR003953"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W130"
FT                   /protein_id="CAE40282.1"
FT                   /translation="MSPVVSEASPERWDDETDVLVIGSGAGGLSAALFAAQAGLRVLIC
FT                   EKLAYVGGTTATSGGGIWVPGTKAGLAAGDTLEAARTYLKALLGDFYQEEVIDTYLATG
FT                   GKVIDFLNENTEVKFDLSSWPDYRSSLPGGATRGRSLFPQPFDGKKLGRNFSLLHPPLH
FT                   RLMVLGGLMLGPEEVHDFLRPFSSPRALMRVLRKLLRYGMDRIRYARGTDLRSGNALAA
FT                   RLLYSVDKLGCRILTQADLESLAIDHDRVIGATVVVGGVPKRIRASKAVLLATGGFAHN
FT                   QEMLRRYGPATPHRFSLCNPACTGAGIQAALDAGASVDRELSSVGFWTPASASREKNGA
FT                   DTPVIYSYLDRGRPGVIAVNEQGERFVNEANSYHDIVTAIFANGGADGKPFYFITDREF
FT                   VRRHGLGLIRPWPWNRSLRPWIRRGYITVASTLDKLGPKIGIDPGALAAAVQRHNQSAR
FT                   TGQDPDFHKGASAYNRMFGHNMIWPNPNLAPIETPPFVALRIHPATIGTAMGLKTSASG
FT                   QALNAAGQPISGLYACGNDQASPFRGFYPGGGSTLGPAIVGAYLAVQSLSKQ"
FT   misc_feature    complement(246390..246422)
FT                   /note="PS00133 Zinc carboxypeptidases, zinc-binding region
FT                   2 signature."
FT   CDS             complement(247690..248640)
FT                   /transl_table=11
FT                   /locus_tag="BPP0874"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3501"
FT                   /db_xref="GOA:Q7W129"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W129"
FT                   /protein_id="CAE40283.1"
FT                   /translation="MIKLMLAGLAALMPMLSMASDYPSKPVTLIAGFAAGGPTDVMARA
FT                   FAQQLAAELGVPIVVENRPGADSLLASQAVRNAKPDGYTIYLASSAHAINPSLFKDAKF
FT                   KVRDDFTPISTIGEVPNVVAIPTDLPARTLKEFIDYAKARDGQLNYATTASITYLQTAL
FT                   MLKSAGLNLQRIPYKGAAPAAVALMSGDVQFMMSGIGPMVPQIQSQKIRALAVTSAKRS
FT                   ALLPDLPTAIEAGLPGFTSTVWYALLAPANVPPDIVKRLNESTRAALQNPDLIAKLTAQ
FT                   GVEQRGSSPEELSQFLAAEEAKWMATVDELGARQQ"
FT   misc_feature    complement(247702..248517)
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 1.7e-84"
FT   misc_feature    complement(248584..248640)
FT                   /note="Signal peptide predicted for BPP0874 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.990 between residues 19 and 20"
FT   CDS             complement(249247..250260)
FT                   /transl_table=11
FT                   /locus_tag="BPP0876"
FT                   /product="LysR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3503"
FT                   /db_xref="GOA:Q7W128"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W128"
FT                   /protein_id="CAE40284.1"
FT                   /translation="MPNTIHQDEGRPIVNSNDHDSPAESRASGVLNLTHLRTLVAVVQE
FT                   GHLTRAAERLRISQPAASHHLRSLEQQFGLPLFTRTPRGVVPTAAGLQLSEQAARLLAS
FT                   SLELLSTASELRGSASGKIAIGTIEDPSVHAALPSLVKWFHEHYPLIELSIESRNSSSV
FT                   RQGILTGEINAGFYVSCTNEANLREYEIGQRELVVVAPQSWRERVATATWPELAKLPWV
FT                   MTTTGSAHSEITAQLFRSHNITIRPALEVNTERLLRAMVSQGVGLGFTRREFAEAERAR
FT                   GAFFIVPISVHRTTMHFAYARSAETDPLIQILSRGLATVLPVAERLIPPTAKPAEK"
FT   misc_feature    complement(249295..249915)
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 3.3e-25"
FT   misc_feature    complement(249985..250164)
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 1.5e-26"
FT   misc_feature    complement(250030..250122)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   CDS             250308..252053
FT                   /transl_table=11
FT                   /locus_tag="BPP0877"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3504"
FT                   /db_xref="GOA:Q7W127"
FT                   /db_xref="HSSP:1D4D"
FT                   /db_xref="InterPro:IPR003953"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W127"
FT                   /protein_id="CAE40285.1"
FT                   /translation="MKDVTPALADYPWDGERDVIVIGSGCAGLSAALLAAKKSLDVVLC
FT                   EKSSQVGGTTASAGGVMWIPNSREARAAGVDDSSEQVRVYLRALMGAYYRADLVDPYLK
FT                   SAPLAAQAIQEDTQVRLKLMPAMSDYHASLPGGKAGGRSLEPERFDGRRLGADFELVRA
FT                   PIKRLMLLGGLYIDKRRIDEFLNPFGSFRNFIGVIRTLARYAIDRTRFSRGTDIGAGNA
FT                   FVASALLSLRERGVPIWLNSPMVSLVRNPQGGVAGVAICRDGKLQRIRARKGVILAAGG
FT                   FPRNAALLEELAGGFPHDQSVGYEGNVGDTLQAARQAGAAIDADLASPCWWTPTSRNKE
FT                   ADGSMSTVLYGYLDRSRPGMIAVNAAGKRFVNDSDSYHDIVYAMFKDGVTPDSRFYLIC
FT                   DRRFVWKRGLGNLIKPYCLSLGRYVRSGYISTGRSIRELAAAIGIDPDALEVTVTRHNG
FT                   FCETGVDLDFGKGGNPYNRMFGDPRVKPNPNLLAIRHAPFFALRIYPGTLGTILGLKAT
FT                   ADAQVVGQDGEAIPGLYACGNDMSSVFRGFYPGAGATLGPGLVFAYRAIEHLARSSGGS
FT                   AAQSA"
FT   CDS             252164..253129
FT                   /transl_table=11
FT                   /locus_tag="BPP0878"
FT                   /product="putative exported protein"
FT                   /note="Similar to Comamonas testosteroni Orf4 protein
FT                   SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E():
FT                   1.4e-35, 37.06% id in 313 aa, and to Comamonas testosteroni
FT                   OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta
FT                   scores: E(): 1e-30, 34.06% id in 320 aa"
FT                   /db_xref="GOA:Q7W126"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W126"
FT                   /protein_id="CAE40286.1"
FT                   /translation="MSFFGRLGMACAMLTLAVPLAVRSAYPEKQVRIIVPFASGSLTDV
FT                   VFRSLAMELERELGQPVIIDNKPGASGIIGTRAALSAAPDGYTLVSVGVTNGASNKSLF
FT                   KDLPYDPSKDFTPIGKVADSPFVLVVRADSPINSLADLYKQARAEPDSVRYGYASGSAQ
FT                   VSGAMLANAADARFALIPYKSSQQILTDIVGQVVDVTLSDFAGGMALVRGDKLKALGVT
FT                   SRTRFPLAPELPTLIEGGAQDYEITVWFGLVGPAQLPQDVQRRLSDALVNALKRPQLIE
FT                   RFTTQGLTATPSSSQEFKTFLDKEILVWGQMIKSAGLTPQ"
FT   misc_feature    252164..252235
FT                   /note="Signal peptide predicted for BPP0878 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.994) with cleavage site
FT                   probability 0.462 between residues 24 and 25"
FT   misc_feature    252299..253117
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 6.4e-81"
FT   CDS             complement(253166..253918)
FT                   /transl_table=11
FT                   /locus_tag="BPP0879"
FT                   /product="probable transcriptional regulator"
FT                   /note="Similar to Bacillus halodurans transcriptional
FT                   regulator Bh2137 SWALL:Q9KAZ9 (EMBL:AP001514) (251 aa)
FT                   fasta scores: E(): 1.3e-14, 29.52% id in 254 aa, and to
FT                   Streptomyces coelicolor putative iclr-family
FT                   transcriptional regulator Sco2544 or Scc77.11 SWALL:Q9RDE7
FT                   (EMBL:AL136503) (265 aa) fasta scores: E(): 2e-13, 30.95%
FT                   id in 252 aa"
FT                   /db_xref="GOA:Q7W125"
FT                   /db_xref="InterPro:IPR005471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W125"
FT                   /protein_id="CAE40287.1"
FT                   /translation="MEVKLVVRTLDVFELFSKEGKPLSLTDMARALDVPMSSTLALVRT
FT                   LVAKGYLYETRKRGGYFPTRKMLLVCQSIDAADQVLELVRPFLEELRNISQETAVLGKR
FT                   QDGQVIYLDVALSHQPIRYHVQVGESRAAHTNSIGKAIFPMLDEKEQKALLAKANWRAL
FT                   TSRTIATREAFLRDMAQTKARGWSSNVGESVEDLAAVALPFQLASEWYAVSIVGPYERM
FT                   ERNWDAHVETLLQTGARLRQAIAVHEGQ"
FT   misc_feature    complement(253190..253738)
FT                   /note="HMMPfam hit to PF01614, Bacterial transcriptional
FT                   regulator, score 2.4e-19"
FT   CDS             complement(254033..254416)
FT                   /transl_table=11
FT                   /locus_tag="BPP0880"
FT                   /product="probable carboxymuconolactone decarboxylase"
FT                   /EC_number="4.1.1.44"
FT                   /note="Similar to Agrobacterium tumefaciens gamma
FT                   carboxymuconolactone decarboxylase PcaC or Atu4541 or
FT                   agr_l_653 SWALL:Q9KX42 (EMBL:U32867) (144 aa) fasta scores:
FT                   E(): 3.3e-10, 35.34% id in 116 aa, and to Yersinia pestis
FT                   putative gamma carboxymuconolactone decarboxylase Ypo3649
FT                   SWALL:Q8ZAY3 (EMBL:AJ414158) (131 aa) fasta scores: E():
FT                   7.9e-16, 42.14% id in 121 aa"
FT                   /db_xref="GOA:Q7W124"
FT                   /db_xref="InterPro:IPR003779"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W124"
FT                   /protein_id="CAE40288.1"
FT                   /translation="MAKTRLEVGRDILKQTLGDAYYAQRVDSTNSFNGSLRRLTDEYCF
FT                   GEVWGDETLTPKQRSMLVIALLACMGRVQELKTHVGGAVNNGCNVEEIRAVMMQVAIYC
FT                   GIPAGVEGTRTAEGVLRERKLID"
FT   misc_feature    complement(254063..254353)
FT                   /note="HMMPfam hit to PF02627, Carboxymuconolactone
FT                   decarboxylase, score 2e-14"
FT   CDS             complement(join(254432..255121,255125..255340))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="BPP0881"
FT                   /product="probable 6-phosphogluconate dehydrogenase
FT                   (Pseudogene)"
FT                   /EC_number="1.1.1.31"
FT                   /note="Similar to Escherichia coli
FT                   2-hydroxy-3-oxopropionate reductase GarR or B3125
FT                   SWALL:GARR_ECOLI (SWALL:P23523) (294 aa) fasta scores: E():
FT                   3.4e-22, 32.87% id in 289 aa, and to Ralstonia solanacearum
FT                   probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase
FT                   protein MmsB or Rsp0649 or Rs05573 SWALL:Q8XS32
FT                   (EMBL:AL646080) (298 aa) fasta scores: E(): 3e-28, 40.06%
FT                   id in 292 aa"
FT                   /db_xref="PSEUDO:CAE40289.1"
FT   misc_feature    complement(join(254855..255121,255125..255340))
FT                   /note="HMMPfam hit to PF03446, NAD binding domain of
FT                   6-phosphogluconate dehydrogenase, score 0.00023"
FT   CDS             complement(255594..256280)
FT                   /transl_table=11
FT                   /locus_tag="BPP0882"
FT                   /product="probable hydrolase"
FT                   /note="Similar to Pseudomonas aeruginosa probable hydrolase
FT                   Pa2419 SWALL:Q9I162 (EMBL:AE004669) (226 aa) fasta scores:
FT                   E(): 8.3e-73, 88.68% id in 221 aa, and to Salmonella
FT                   typhimurium and Salmonella typhi SlsA or Stm3761 or Sty4025
FT                   SWALL:Q9Z622 (EMBL:AF106566) (226 aa) fasta scores: E():
FT                   3.4e-66, 80.54% id in 221 aa"
FT                   /db_xref="GOA:Q7W123"
FT                   /db_xref="InterPro:IPR000868"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W123"
FT                   /protein_id="CAE40290.1"
FT                   /translation="MSVFAQIANFNGQVPRIDPDNAVMLLIDHQSGLFQTVHDMPMPTL
FT                   RSNATTLARIATLAKMPVITTASVPQGPNGPLIPEIHESAPHARYVARKGEINAWDNPE
FT                   FVAAVKATGKKQLIIAGTITSVCMAFPCIAAVAEGYQVFAVVDASGTYSKMAQEITLAR
FT                   VVQAGVVPMDTAAVCSEIQRTWNRPDAEKWAEAYSAVFPDYQLLIESYLKAQAVVTNKE
FT                   QLDSQR"
FT   misc_feature    complement(255744..256232)
FT                   /note="HMMPfam hit to PF00857, Isochorismatase family,
FT                   score 1.3e-13"
FT   CDS             256825..258456
FT                   /transl_table=11
FT                   /locus_tag="BPP0883"
FT                   /product="lactate permease family protwin"
FT                   /note="Similar to Escherichia coli glycolate permease GlcA
FT                   or B2975 SWALL:GLCA_ECOLI (SWALL:Q46839) (560 aa) fasta
FT                   scores: E(): 1.5e-27, 25% id in 560 aa, and to
FT                   Campylobacter jejuni L-lactate permease LctP or Cj0076C
FT                   SWALL:Q9PJ45 (EMBL:AL139074) (560 aa) fasta scores: E():
FT                   4.2e-30, 26.48% id in 555 aa"
FT                   /db_xref="GOA:Q7W122"
FT                   /db_xref="InterPro:IPR003804"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W122"
FT                   /protein_id="CAE40291.1"
FT                   /translation="MDSTPGLMHWLLAALPIVALIVLMVAMRWTAQQAGTTGIFIASAV
FT                   AVLAFATPLDTLAVASAKGVWDALFILYVIWPALLLYHVMSHSGGYDALRRGIELMSRN
FT                   ELFVIVALGWVFASFLQGIDGFGTPIAVVAPLLVAFGMRPVYAVAIPIIAHIWAKFYGT
FT                   LGVGWLATLQVVDIDAATTASTALQAALLISIQAVLGGFTIVWLYGRWAAIRSGWPLVL
FT                   VIAAIQGLGQVAAVYVDPVLAAFLPVTAALVALIPLSRWSRYREPDASIVERPAMLDHA
FT                   SRKRVDAEPPMGLWTALAPYGLLTVLALCVSMIDPLHSRLDAVAWGLAFPEVATGLGMT
FT                   TAAAAQYSALRPFSHPGAYILLTALLTFVVFHRRGYFRKWAEQHGEPPARIVPELLQGA
FT                   VPASIPIIAFLVMASIMKHSGQNLTLAMGIAAVAPAYVFAFLSNAIGILGAFMTSSSTS
FT                   SQVIFSDVQMRLAQAKGLPVSTILAAQSAGGAIGNAIAPANVVMGASTAGIAGQEGEIL
FT                   RKTLPWTVLAFVLTGVATVLLALFMQ"
FT   misc_feature    256825..256977
FT                   /note="Signal peptide predicted for BPP0883 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.942) with cleavage site
FT                   probability 0.346 between residues 51 and 52"
FT   misc_feature    join(256840..256899,256936..257004,257014..257082,
FT                   257140..257193,257206..257274,257287..257355,
FT                   257383..257451,257470..257538,257698..257766,
FT                   257791..257859,257887..257940,257998..258066,
FT                   258109..258177,258286..258354,258382..258450)
FT                   /note="15 probable transmembrane helices predicted for
FT                   BPP0883 by TMHMM2.0 at aa 6-25, 38-60, 64-86, 106-123,
FT                   128-150, 155-177, 187-209, 216-238, 292-314, 323-345,
FT                   355-372, 392-414, 429-451, 488-510 and 520-542"
FT   misc_feature    256846..258438
FT                   /note="HMMPfam hit to PF02652, L-lactate permease, score
FT                   2.8e-24"
FT   CDS             258468..258665
FT                   /transl_table=11
FT                   /locus_tag="BPP0884"
FT                   /product="putative membrane protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W121"
FT                   /protein_id="CAE40292.1"
FT                   /translation="MIKRFLQNRMSYLGLSFVLFIAALPLISIGAAGPSRGLFWLGFVS
FT                   MGVAAAIPPVQRLLYPPKAS"
FT   misc_feature    258468..258617
FT                   /note="Signal peptide predicted for BPP0884 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.479 between residues 50 and 51"
FT   misc_feature    join(258501..258569,258579..258647)
FT                   /note="2 probable transmembrane helices predicted for
FT                   BPP0884 by TMHMM2.0 at aa 17-39 and 43-65"
FT   CDS             258709..260370
FT                   /transl_table=11
FT                   /gene="ggt"
FT                   /locus_tag="BPP0885"
FT                   /product="gamma-glutamyltranspeptidase precursor"
FT                   /EC_number="2.3.2.2"
FT                   /note="Similar to Escherichia coli
FT                   gamma-glutamyltranspeptidase precursor Ggt or B3447
FT                   SWALL:GGT_ECOLI (SWALL:P18956) (580 aa) fasta scores: E():
FT                   1.6e-47, 31.47% id in 556 aa, and to Salmonella typhi
FT                   gamma-glutamyltranspeptidase Ggt or sty4260 SWALL:Q8Z242
FT                   (EMBL:AL627281) (580 aa) fasta scores: E(): 1.1e-48, 32.19%
FT                   id in 556 aa"
FT                   /db_xref="GOA:Q7W120"
FT                   /db_xref="InterPro:IPR000101"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W120"
FT                   /protein_id="CAE40293.1"
FT                   /translation="MIHANGPRTGRPPALGRRGMVSSPHYLASGSGLEVLRRGGSAVDA
FT                   AIATNATLCVVYPHMAGLGGDAFWLIAAGAAQGVQALQACGPAGALADMDFYRGKGHAE
FT                   AIPARGALAALTVPGAVDGWRLAHERYGKLPWESLFADAIEYARHGAPVSRSLADWLAA
FT                   DAAILAADPGMAGIYLPEGKPQREGSYLVQADLARTLETLARLGPREGFYEGEVAREIC
FT                   RYLEAAGGPLRAADFERYRAEWVQPISGTYRGYEVFQMPPPTQGFAALQILKLLEQCDV
FT                   AAWGAESAEYYHHVVEAIKIAFADRDEWLSDPAYVDMPLATLLSSEYCRQRHALIRSES
FT                   ALALDRIEAGIKFGGAASRKSPDGDTVYFCVADADGLVVSTIQSIYHDFGAAVVGGNTG
FT                   VIMQNRGSFFSLDADHPNCLQPGKHTFHTLVPAMLMKDGQPVLAYGTMGGEGQPQTQAA
FT                   LLTRMVDFGYDVQQAIEAPRWLMGRTWGMSSRDLWLEARIADETLRELRLRGHPVKTVP
FT                   NWDGTLGHAQAIRIDPVTRAFEGGADPRGDGAALGF"
FT   misc_feature    258805..260355
FT                   /note="HMMPfam hit to PF01019,
FT                   Gamma-glutamyltranspeptidase, score 8.6e-163"
FT   CDS             260389..260850
FT                   /transl_table=11
FT                   /locus_tag="BPP0886"
FT                   /product="putative universal stress protein"
FT                   /note="Similar to Brucella melitensis universal stress
FT                   protein family Bmei0102 SWALL:Q8YJI1 (EMBL:AE009453) (149
FT                   aa) fasta scores: E(): 5.8e-12, 43.04% id in 151 aa, and to
FT                   Ralstonia solanacearum hypothetical protein Rsp1159 or
FT                   Rs05426 SWALL:Q8XQR2 (EMBL:AL646083) (146 aa) fasta scores:
FT                   E(): 6.5e-11, 37.9% id in 153 aa"
FT                   /db_xref="GOA:Q7W119"
FT                   /db_xref="HSSP:1MJH"
FT                   /db_xref="InterPro:IPR006015"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W119"
FT                   /protein_id="CAE40294.1"
FT                   /translation="MFKKILIPTDGSSPATQAAHAGIDFAKSIGAEVVVVSVAQPFAAA
FT                   FAYDGLGSGYAFSEEDIDKSMLEQAEAYVQPIAERAREAGLRVDGRAVSHINVAQGIVQ
FT                   AATDSGCDLIFIGSHGRSGLSRLLLGSVTAKVLPLASMAVLVHRAKEEQ"
FT   misc_feature    260389..260451
FT                   /note="Signal peptide predicted for BPP0886 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.614) with cleavage site
FT                   probability 0.554 between residues 21 and 22"
FT   misc_feature    260389..260832
FT                   /note="HMMPfam hit to PF00582, Universal stress protein
FT                   family, score 5.4e-11"
FT   CDS             complement(260868..261341)
FT                   /transl_table=11
FT                   /locus_tag="BPP0887"
FT                   /product="putative GnaT-family acetyltransferase"
FT                   /note="Similar to Caulobacter crescentus acetyltransferase,
FT                   GnaT family Cc0191 SWALL:Q9ABN5 (EMBL:AE005693) (179 aa)
FT                   fasta scores: E(): 2.2e-11, 35.82% id in 134 aa, and to
FT                   Bacillus halodurans hypothetical protein Bh0478
FT                   SWALL:Q9KFK1 (EMBL:AP001508) (157 aa) fasta scores: E():
FT                   4.8e-12, 31.61% id in 155 aa"
FT                   /db_xref="GOA:Q7W118"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W118"
FT                   /protein_id="CAE40295.1"
FT                   /translation="MAIRTARQDDLEWIVAAHAQVYAAEFGFDRRFRDGIAAKMAALRR
FT                   RPGALDRIWVGWVEDERAASIAVSDRPGGIAFLNFVLVLPRYRGRGAGRAMMETALAHA
FT                   RAHGSREVQLETYSCLVDARALYHRLGFRATMVAPGQHAYGQTFDQEFWALAL"
FT   misc_feature    complement(260943..261182)
FT                   /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT)
FT                   family, score 1.1e-18"
FT   CDS             complement(261452..263299)
FT                   /transl_table=11
FT                   /locus_tag="BPP0888"
FT                   /product="probable acyl-CoA dehydrogenase"
FT                   /note="Similar to Pseudomonas aeruginosa probable acyl-CoA
FT                   dehydrogenase Pa3593 SWALL:Q9HY33 (EMBL:AE004779) (575 aa)
FT                   fasta scores: E(): 8.5e-102, 48.16% id in 571 aa, and to
FT                   Mycobacterium tuberculosis putative acyl CoA dehydrogenase
FT                   FadE35 or Rv3797 or Mtv026.02 or Mt3904 SWALL:O53577
FT                   (EMBL:AL022076) (593 aa) fasta scores: E(): 4.7e-43, 33.78%
FT                   id in 586 aa"
FT                   /db_xref="GOA:Q7W117"
FT                   /db_xref="InterPro:IPR013764"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W117"
FT                   /protein_id="CAE40296.1"
FT                   /translation="MAYQPDYGSFARKRPARSTQSSEKLAPDCAGLDFFAIDPSLQQLL
FT                   SVYVPGAELEYFRPHFERMGKLAGGRLNELAMVADKHGPVLHARSRWGEDEDWIEYHPA
FT                   YQEMEHIAFEQFQFHAMTHRPGAMGYAGTLSPITKYVFQYLFVQSEFGQMCPISVTDTS
FT                   IHLIRKFGSEALQARLLPRMLADNLQDLWKGTQFMTEKSGGSDVGQVETTARQIDGQWH
FT                   LHGEKWFSSHVDADIALILARPEGAPAGTRGLALFAMPRYREDGSRNSYRIVRLKDKLG
FT                   TRSMASGELRIDGAFAYLVGDPTQDIKQMMEQVNLSRLSHAVRAAAMMRRCLNESMQAA
FT                   RHRQAFGRQVVDYPLMQRQLLKLLVPTEAALTMTMATADAMAKAYGGDAQCKAALRLLT
FT                   PLLKLRACRDNVTVATGAMEVRGGNGYIEDFVNARLVRDAHIGVLWEGTSNINALDAIE
FT                   RAVRKDQAHIALRALLLEKLRAVRAQAPVIAGPLAEAVAAACQLAEGVAGDPRHESEVR
FT                   RAASALYHASAAVLMAWEATQEGVDGRRLLLADAMLRTRLLPRDPLAAPSAAMLARDLA
FT                   MLQGEKLSLRQAADLLAPHDAGVAPARQARADAAAPAQA"
FT   misc_feature    complement(261917..262390)
FT                   /note="HMMPfam hit to PF00441, Acyl-CoA dehydrogenase,
FT                   C-terminal domain, score 1.8e-32"
FT   misc_feature    complement(261986..262045)
FT                   /note="PS00073 Acyl-CoA dehydrogenases signature 2."
FT   misc_feature    complement(262400..262708)
FT                   /note="HMMPfam hit to PF02770, Acyl-CoA dehydrogenase,
FT                   middle domain, score 9.1e-07"
FT   CDS             complement(263333..264559)
FT                   /transl_table=11
FT                   /locus_tag="BPP0889"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Acinetobacter sp. NCIMB9871 L-carnitine
FT                   dehydrogenase-like protein Orf17 SWALL:Q93RL7
FT                   (EMBL:AB026669) (405 aa) fasta scores: E(): 9.9e-83, 52.22%
FT                   id in 404 aa, and to Brucella melitensis
FT                   alpha-methylacyl-CoA racemase Bmeii1019 SWALL:Q8YB81
FT                   (EMBL:AE009734) (415 aa) fasta scores: E(): 1.5e-85, 52.85%
FT                   id in 403 aa"
FT                   /db_xref="GOA:Q7W116"
FT                   /db_xref="HSSP:1PQY"
FT                   /db_xref="InterPro:IPR003673"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W116"
FT                   /protein_id="CAE40297.1"
FT                   /translation="MPNKPLQKYRVLDLTRVLAGPWCTQNLADLGAEVIKVERPGVGDE
FT                   TRGWGPPWIPAGAASKRRDSAYFGSANRGKKSITIDFTTAQGQALVRQLAADCDVLVEN
FT                   YKTGTLARYGLGYEDLKAVNPGLVYCSVTGFGHTDPYRHKPGYDFVFQAMSGLMSITGE
FT                   RDDLPGGGPQKVGIAVADITTGMYSTVAVLAALLERESHGRGQHLDMALLDCAMAFNSN
FT                   QAVNYMASGSMPRRYGNAHSNAVPYQVFDTRDGQIVVAVGNDALFAAYCRAAQRPDLCA
FT                   DARFVTVSGRLQNRDELLSQLAVVMAGKTSAQWLAVLDAAGVPCAPINDFEQALADPQV
FT                   KARNIETHIALEDGAVFRTIASPLRFSETPLDHLAGPPMLGQHTADVLRERLGLDEAQQ
FT                   AGLRQAGVI"
FT   misc_feature    complement(263630..263653)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    complement(263747..264328)
FT                   /note="HMMPfam hit to PF02515, CAIB/BAIF family, score
FT                   9.8e-75"
FT   CDS             complement(264608..265597)
FT                   /transl_table=11
FT                   /locus_tag="BPP0890"
FT                   /product="putative exported protein"
FT                   /note="Similar to Comamonas testosteroni OrfJ protein
FT                   SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E():
FT                   7.1e-38, 40.55% id in 323 aa, and to Rhizobium meliloti
FT                   hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30
FT                   (EMBL:AE007292) (330 aa) fasta scores: E(): 4.2e-44, 41.12%
FT                   id in 321 aa"
FT                   /db_xref="GOA:Q7W115"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W115"
FT                   /protein_id="CAE40298.1"
FT                   /translation="MGLDTTKLAAVLATSLSLCAASAAASPTSADYPRQTVRLIVPYAA
FT                   GGMTDLVARIVGQKLGEGLGQAVVVENKPGASTITGADFVAGARPDGYTLLVATNTTLT
FT                   INPWLYKNLRYDAQKSFTPIALVAKAPSVIVVNPKVPANNIGELVELASARPGSLSYAS
FT                   YGNGSSAHLAGEMLRSRAGIAVLHVPYRGSAPAKTATMSGEVSMTFEPAFTAAPLIKSG
FT                   QLKPIALMGDKRSPALPDVPTVAEVGYPGMDMQAWVGFVAPANMPDGIVARLAAEIRKV
FT                   MADPEVQAKLIGSGAEPVGYYQQDFTAYMRDESARYKTVIEQAGIRAE"
FT   misc_feature    complement(264620..265444)
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 2.8e-106"
FT   misc_feature    complement(265523..265597)
FT                   /note="Signal peptide predicted for BPP0890 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.829 between residues 25 and 26"
FT   CDS             265738..266631
FT                   /transl_table=11
FT                   /locus_tag="BPP0891"
FT                   /product="probable LysR-family transcriptional regulator"
FT                   /note="Similar to Pseudomonas aeruginosa probable
FT                   transcriptional regulator Pa3594 SWALL:Q9HY32
FT                   (EMBL:AE004780) (295 aa) fasta scores: E(): 1.8e-47, 46.1%
FT                   id in 295 aa, and to Ralstonia solanacearum probable
FT                   transcription regulator protein Rsp1357 or Rs04822 or
FT                   Rsp1326 or Rs05669 SWALL:Q8XFS3 (EMBL:AL646084) (306 aa)
FT                   fasta scores: E(): 1e-38, 41.39% id in 302 aa"
FT                   /db_xref="GOA:Q7W114"
FT                   /db_xref="HSSP:1IXC"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W114"
FT                   /protein_id="CAE40299.1"
FT                   /translation="MELRQLRYFVAVAEALHFGRAARRLSISQPPLSFNIARLEESLGY
FT                   ALLRRSTRAVELTAAGKVFYQEACRILALADQARALGQRAARGEVGSLRVGFVGASLLS
FT                   PMARVLRQFEQDRPGLMLSVHELNSFEQIHALQREQIDFGIMHPRSIPDGILARLLHRE
FT                   PFVCALPDSHPLAARQRIRLQALKDESFVLFPRHFSPEYHDQIIVLCMDAGFTPHIRYE
FT                   VRANATVVALVAAGFGVAIVPRSVSRVAIDGIRFRPLAKAGVESQLLGVWRDDGHDSLI
FT                   QPLLAAMASLLPAARR"
FT   misc_feature    265744..265923
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 3e-25"
FT   misc_feature    265786..265878
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    265993..266616
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 2.6e-43"
FT   CDS             266770..267459
FT                   /transl_table=11
FT                   /locus_tag="BPP0892"
FT                   /product="hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W113"
FT                   /protein_id="CAE40300.1"
FT                   /translation="MAAPFTKWFCIMQDVDVSPDLDRGLGIFRRVSFYELMEIMTFSRL
FT                   PFAPAARRRGAGVVDLSWRFLDGAGCVRAAPRKRGEPWICLVSTVDSLAASLFTQADMA
FT                   VRMEAAGRAASASGDAAAAFQAGPGALAVVLSAAGEGGEAQRRGHGVNLLVDLGTLLSG
FT                   VLVSPAAPASFVGLVGEIVQRNTGAWVSRGPLRKADAGAREPALMPARPPARGRRPAVG
FT                   RTPTAGP"
FT   CDS             complement(267443..268426)
FT                   /transl_table=11
FT                   /locus_tag="BPP0893"
FT                   /product="putative exported protein"
FT                   /note="Similar to Comamonas testosteroni OrfJ protein
FT                   SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E():
FT                   1.7e-28, 31.05% id in 322 aa, and to Rhizobium meliloti
FT                   hypothetical protein Ra1058 ra1058 or sma1927 SWALL:Q92Y30
FT                   (EMBL:AE007292) (330 aa) fasta scores: E(): 1.9e-31, 34.96%
FT                   id in 326 aa"
FT                   /db_xref="GOA:Q7W112"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W112"
FT                   /protein_id="CAE40301.1"
FT                   /translation="MFKLNLSRCAPMALAIVLAGGAMTARAQDHAPVRIVIGFSAGGAL
FT                   DNMSRAIAEQLKAELGQSVIVENKPGAGTQIALQTVKRSPPDGNTILISPAPPFVLFPL
FT                   TYDRLQYDADKDLVPVAHLADTPLVASTSSNSPYSTMHEYLAWVRKNPDSVGVGMVSLG
FT                   GALHFGLLKLNQHSGLNLMPIAYKGAPAMLTDEIGGVLPIGMDTVAATSELARAGKIKY
FT                   LGVTGTERSALLPDVPTLGESGAPGFEQSSGWYAAFVSAGTPKAVTDKLERALIKIVKD
FT                   PAFSARVAQVGLVSTGKPGAELAAMIQAQRQAWQPVVKASGFKALQ"
FT   misc_feature    complement(267458..268285)
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 1.7e-64"
FT   misc_feature    complement(268346..268426)
FT                   /note="Signal peptide predicted for BPP0893 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.733 between residues 27 and 28"
FT   CDS             complement(268507..269247)
FT                   /transl_table=11
FT                   /locus_tag="BPP0894"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Pseudomonas aeruginosa hypothetical
FT                   protein Pa3775 SWALL:Q9HXM0 (EMBL:AE004796) (260 aa) fasta
FT                   scores: E(): 2.6e-15, 36.48% id in 233 aa, and to Rhizobium
FT                   meliloti hypothetical protein Rb0277 or Smb20287
FT                   SWALL:Q92WQ2 (EMBL:AL603642) (235 aa) fasta scores: E():
FT                   4.4e-06, 28.93% id in 235 aa"
FT                   /db_xref="GOA:Q7W111"
FT                   /db_xref="InterPro:IPR002781"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W111"
FT                   /protein_id="CAE40302.1"
FT                   /translation="MIDLLFPACAVLLGYVVLGITGFGSALVVVPLLAWRWPLPEVVAL
FT                   TLLLDVMASLLLGGLNLRQVDFAELRRLLPGMVAGALAGLWLSRSLDASWPLLVLGLYV
FT                   AAVGAQALRPGPARPRPPAAAPWALAAGGAIGVVEMLFGTAGPLVVAWLSRRLPDVHAL
FT                   RASTPVVITVSACSVLLAMGWAGRLSQPELWTRWLALVGVAAGGVLLGHRWARHVSPAA
FT                   LRKLICGLLVVSGLTLVVHTLQQG"
FT   misc_feature    complement(join(268519..268569,268609..268665,
FT                   268696..268761,268801..268866,268912..268968,
FT                   269062..269127,269143..269208))
FT                   /note="7 probable transmembrane helices predicted for
FT                   BPP0894 by TMHMM2.0 at aa 13-35, 40-62, 93-112, 127-149,
FT                   162-184, 194-213 and 226-243"
FT   CDS             complement(269263..270792)
FT                   /transl_table=11
FT                   /locus_tag="BPP0895"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Ralstonia solanacearum hypothetical
FT                   protein Rsp1573 or Rs02129 SWALL:Q8XPR5 (EMBL:AL646085)
FT                   (494 aa) fasta scores: E(): 1.2e-45, 34.28% id in 493 aa,
FT                   and to Rhizobium loti hypothetical protein Mlr6294
FT                   SWALL:Q989S9 (EMBL:AP003008) (525 aa) fasta scores: E():
FT                   9.8e-42, 33.46% id in 520 aa"
FT                   /db_xref="InterPro:IPR015995"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W110"
FT                   /protein_id="CAE40303.1"
FT                   /translation="MKFVIALIRHETNTFSPVGTELSDFRRGTSGDGPAHGEAARLACE
FT                   GTNNAAAAYLDMAREMGAEVDFSVYASAVPSGLVSRAAFEALCDAVLDSARQGCDAILL
FT                   DLHGAMVVDGYPDAEGELLRRLRACTPAGLPIGVALDFHANFSSELIRHATAIAGYCTY
FT                   PHVDVYETGARVGRTIRALLEGRSQPVVLWRRLPMLTHMLRQTPALQPMKDIMARAMQA
FT                   ERDGEVCNASVFGGFPLANIACAGLSVVIVAERARLEAAQRLLDELCGLAWSRRADFVF
FT                   PSEPVADSISHARTLEQGPVILVDHGDNCGAGGTTDVMDVLEEVLRQGLQDVVAGPFCD
FT                   PAAVAALFEQGVDAEVTLDVGGKTDMPALGLAGRPLRLTGVVERLTDGEYTVTGPMFTG
FT                   VRLSLGRTAVLRVGTVRVFISERPQEPYDTGVFTHAGVDPAQSRYVLLKSRQHFRAGFE
FT                   PFARHIVLVGGPGVCSSDYGIFPFRHLSRPIYPLDADATLEHAQSWIAGDA"
FT   CDS             complement(270805..271803)
FT                   /transl_table=11
FT                   /locus_tag="BPP0896"
FT                   /product="putative exported protein"
FT                   /note="Similar to Comamonas testosteroni OrfJ protein orfJ
FT                   SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E():
FT                   1.7e-25, 29.39% id in 330 aa, and to Comamonas testosteroni
FT                   Orf4 protein SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta
FT                   scores: E(): 5.1e-25, 32.61% id in 325 aa"
FT                   /db_xref="GOA:Q7W109"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W109"
FT                   /protein_id="CAE40304.1"
FT                   /translation="MEMRRIRRRVVGLAIASCLAPLLGLGPALAQADWPARTMKVVVPY
FT                   PAGGTADAMGRMVAGKLAKAFPQASVIVENISGGATVPGAMAVLRDPADGHTLFMASDN
FT                   TLNINHWLLKDARYDGDRDFTPVTVLNTYPHWLIVNPQGPYDSFDALVQAIRANPGKIS
FT                   ISVNTIGGAAYLALDNWRRRNGLEFEIVPYRGSPPAVADLIGGHTDTHVDVVGSSIAHA
FT                   RGARVLPVAILQDTPLAEFPKAVAQDGKDPKALAVQSNLSVVVRAGTPPALLERLYAAL
FT                   QTGVKDKDFAGMLDMLSLDAVMLPPAQARTFLAQETRRYGALVEQSGLEKQ"
FT   misc_feature    complement(270817..271644)
FT                   /note="HMMPfam hit to PF03401, Uncharacterized protein
FT                   family, UPF0065, score 8e-36"
FT   misc_feature    complement(271714..271803)
FT                   /note="Signal peptide predicted for BPP0896 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.607 between residues 30 and 31"
FT   CDS             271913..272830
FT                   /transl_table=11
FT                   /locus_tag="BPP0897"
FT                   /product="probable LysR-family transcriptional regulator"
FT                   /note="Similar to Ralstonia solanacearum probable
FT                   transcription regulator protein Rsp1357 or Rs04822 or
FT                   rsp1326 or rs05669 SWALL:Q8XFS3 (EMBL:AL646084) (306 aa)
FT                   fasta scores: E(): 3.6e-23, 33.44% id in 308 aa, and to
FT                   Clostridium acetobutylicum transcriptional regulator, LysR
FT                   family Cac2394 SWALL:Q97GH3 (EMBL:AE007739) (286 aa) fasta
FT                   scores: E(): 3.1e-22, 29.41% id in 289 aa"
FT                   /db_xref="GOA:Q7W108"
FT                   /db_xref="HSSP:1IXC"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W108"
FT                   /protein_id="CAE40305.1"
FT                   /translation="MDEHRLKCFVAVYEEGSVSAAAVRLHMTQPPLSILLRKLEDELRV
FT                   GLFDRGGRRLVPTAAGELFYLRAKAMLANLQTIRRELREVEQGARGLVHIGCSTAASLF
FT                   IVPRVMEDLAAEGLEIVLHVHEGEIGYMLQQLRERSLDLTICRSQHMAPDLESQVIMEE
FT                   PLFVALPPGHPLAGRARVRLADLRDERFLLHRSPLGTGISDMVLRACRNAGFAPNVVYW
FT                   GGETLPMLLMARRGLGIAFAPQSFAQLGLQGLAALVPVADAEFRTHLNMVWPRQQALSP
FT                   IASWVRELIMKRFGPAGGEPRAAS"
FT   misc_feature    271964..272098
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 1.4e-08"
FT   misc_feature    272168..272797
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 7.6e-44"
FT   misc_feature    272174..272224
FT                   /note="PS00606 Beta-ketoacyl synthases active site."
FT   CDS             complement(272827..273990)
FT                   /transl_table=11
FT                   /locus_tag="BPP0898"
FT                   /product="putative membrane protein"
FT                   /note="Similar to Agrobacterium tumefaciens Ggdef family
FT                   protein Atu1257 or Agr_c_2322 SWALL:Q8UFY7 (EMBL:AE009087)
FT                   (415 aa) fasta scores: E(): 2.4e-21, 31.62% id in 389 aa,
FT                   and to Rhizobium loti hypothetical protein Mll4271
FT                   SWALL:Q98EF2 (EMBL:AP003003) (398 aa) fasta scores: E():
FT                   6.1e-17, 28.75% id in 400 aa"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W107"
FT                   /protein_id="CAE40306.1"
FT                   /translation="MNVDLTTLYLLATGTLIASAGMMLWEYRANPGRGRALGLFAAGFA
FT                   TLALGCVAALYRRDLPGVWGSALANLIMIGAYLLVLQGVGALRGSRHGAFGAAVLAVMA
FT                   AVWALSDPAEMDATWSHVSAAPIALINAMTALSMWRNPAMRPFPARRMVIAMTGLHALI
FT                   YAGRALVLPWLVREHGLPVQALAGKFTIYEGVLYSVILPMALLRLLREEIHGELLRESQ
FT                   TDYLTRLGNRRWFFEEGARLLKHRPAGSSPLAVLAFDLDQFKAINDMYGHQTGDEVLQA
FT                   FARAAQDVIGPRAVLARIGGEEFAALLRGDDALKAQALGEAVAGRFTQAVAGRLAHISL
FT                   PVTVSIGLARIEPGDATLAASLMAADRAMYRAKSLGGNRLEVAAGAA"
FT   misc_feature    complement(272854..273342)
FT                   /note="HMMPfam hit to PF00990, GGDEF domain, score 3.9e-42"
FT   misc_feature    complement(join(273364..273420,273466..273531,
FT                   273568..273633,273664..273714,273736..273792,
FT                   273823..273888,273910..273975))
FT                   /note="7 probable transmembrane helices predicted for
FT                   BPP0898 by TMHMM2.0 at aa 46-68, 75-97, 107-126, 133-150,
FT                   160-182, 194-216 and 231-250"
FT   CDS             complement(274132..275574)
FT                   /transl_table=11
FT                   /locus_tag="BPP0899"
FT                   /product="probable pyridine nucleotide-disulphide
FT                   oxidoreductase"
FT                   /note="Similar to Agrobacterium tumefaciens opine oxidase
FT                   subunit A OoxA SWALL:OOXA_AGRT4 (SWALL:Q59160) (503 aa)
FT                   fasta scores: E(): 1.1e-73, 49.05% id in 475 aa, and to
FT                   Rhizobium meliloti opine oxidase subunit A OoxA
FT                   SWALL:OOA2_RHIME (SWALL:P72300) (526 aa) fasta scores: E():
FT                   2.5e-71, 46.48% id in 469 aa"
FT                   /db_xref="GOA:Q7W106"
FT                   /db_xref="InterPro:IPR007419"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W106"
FT                   /protein_id="CAE40307.1"
FT                   /translation="MTRRCELLVVGAGPAGMAAATQSAALGVDTLLLDEQATPGGQIYR
FT                   AITTTALTRPDILGPDYWHGASLLEPLRASGAAYLSGATVWAVSRGAEAGDGGAFEVAY
FT                   SVGGQADILRARHILLATGALERPFPIPGWTLPGVVTAGAAQILLKTAAIVPGEHAVLA
FT                   GGGPLLYLLAWQYLNAGVRIERLLETTAPGGLARALPHALDFLRSPYLAKGLKLMRAVR
FT                   AHVPITRGVRDLRAQGRERLESLSYRAGGRTHDMPARHLMLHQGVVPNLNLSRALGVDH
FT                   QWNPTQACWQPRVDDWGATSVAGIGIAGDGADIGGAIAAEHRGRLAALQAAVALGRIDD
FT                   ARRDREARAPRRALARAMRGRAFFDVLYRPADAYRRPGDDTIVCRCEEITAGQIRATVR
FT                   LGCSGPNQMKAFLRCGMGPCQGRLCGLTVSELIAHERGVPLPEVGYYRLRFPTKPVTLG
FT                   ELASLPQTEASRQAVVRLKKTA"
FT   misc_feature    complement(274612..275559)
FT                   /note="HMMPfam hit to PF00070, Pyridine
FT                   nucleotide-disulphide oxidoreductase, score 5.7e-06"
FT   misc_feature    complement(275500..275574)
FT                   /note="Signal peptide predicted for BPP0899 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.990) with cleavage site
FT                   probability 0.332 between residues 25 and 26"
FT   CDS             complement(275571..275879)
FT                   /transl_table=11
FT                   /locus_tag="BPP0900"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Streptomyces coelicolor hypothetical
FT                   protein Sco6290 or Scbac8d1.03 SWALL:Q93RY2 (EMBL:AL591084)
FT                   (84 aa) fasta scores: E(): 1.1e-10, 53.42% id in 73 aa, and
FT                   to Agrobacterium tumefaciens hypothetical protein Tiorf192
FT                   or Atu6020 or Agr_pti_bx141 SWALL:Q9R690 (EMBL:AB016260)
FT                   (97 aa) fasta scores: E(): 2.3e-08, 36.66% id in 90 aa"
FT                   /db_xref="GOA:Q7W105"
FT                   /db_xref="InterPro:IPR001041"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W105"
FT                   /protein_id="CAE40308.1"
FT                   /translation="MFKRLEAAPGLPARPVVHIDVNGEAVSCRAGESVAAALLAAGHDA
FT                   CRATMVGGVPRGPYCMMGVCYDCLVTIDGQANRQACMTPVRDGMRVERQQRAREVLP"
FT   CDS             complement(275863..277017)
FT                   /transl_table=11
FT                   /locus_tag="BPP0901"
FT                   /product="probable FAD dependent oxidoreductase"
FT                   /note="Similar to Agrobacterium tumefaciens opine oxidase
FT                   subunit B OoxB SWALL:OOXB_AGRT4 (SWALL:Q59159) (371 aa)
FT                   fasta scores: E(): 1.1e-54, 45.79% id in 369 aa, and to
FT                   Rhizobium meliloti opine oxidase subunit B OoxB or Ra1199
FT                   or Sma2223 SWALL:OOB1_RHIME (SWALL:Q92XP5) (368 aa) fasta
FT                   scores: E(): 4.6e-56, 46.44% id in 366 aa"
FT                   /db_xref="GOA:Q7W104"
FT                   /db_xref="InterPro:IPR006076"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W104"
FT                   /protein_id="CAE40309.1"
FT                   /translation="MAISAAADAAPRFSGHDVIVVGGGLVGSALAYGLRRRLDRVAVLD
FT                   EGDLAYRASRGNFGLIWVQSKGMGMPRYGVWTMASQRAWPDLAARLLEESGIDVHLEQQ
FT                   GGLHVLLSDEEVQARIDFMTRLLAQPGMSDYAWKLLDRHELADLVPGIGPEVRGASWTP
FT                   VDGIANPLKLLRALHTTFERNGVDYLPRCPAQSISRHADGMFVVDTPRGRLQAPRLVLA
FT                   CGLGNQAMGAQVGLDIPVRPQRGQIIVLERTHRVLRTPISTLRQMDEGSWLIGDSQEEA
FT                   GYADNEVSLPILGTLADRAVRTLPALREVNVVRSWSALRVMSPDGFPIYAQSATCPGAF
FT                   VATCHSGVTLAGAHALLLAPMIADGALAGDMAPFSARRFHVQEA"
FT   misc_feature    complement(275917..276972)
FT                   /note="HMMPfam hit to PF01266, FAD dependent
FT                   oxidoreductase, score 0.0049"
FT   CDS             complement(277045..278094)
FT                   /transl_table=11
FT                   /locus_tag="BPP0902"
FT                   /product="putative dipeptidase"
FT                   /note="Similar to Ralstonia solanacearum putative
FT                   dipeptidase protein Rsp0056 or Rs02031 SWALL:Q8XTQ0
FT                   (EMBL:AL646076) (323 aa) fasta scores: E(): 2.2e-29, 33.33%
FT                   id in 306 aa, and to Rhizobium loti hypothetical protein
FT                   Mlr6286 SWALL:Q989T6 (EMBL:AP003008) (338 aa) fasta scores:
FT                   E(): 1e-26, 30.59% id in 317 aa"
FT                   /db_xref="GOA:Q7W103"
FT                   /db_xref="InterPro:IPR008257"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W103"
FT                   /protein_id="CAE40310.1"
FT                   /translation="MSKAFGLELSETEQERVARIRKEFVYWNLCDSTTRECGDETYLEQ
FT                   VKASNVTAINHTVCYTVDFAEGVKNVAHWTRLYDARPDVGFIAKTYADIERTRKERRTA
FT                   IFMGFQDVTALEDDMDRMEVFYNLGIRFVQPTYQDRNLFGDGCGERFQSGLSKLGIKFV
FT                   EKLDELGIVIDTSHVGIGTTIDCANMSQRPIMATHTAARAIVDTPRNKTDDEIKAIAAK
FT                   GGVIGIAGKSGFLKKDGLETGSTINDMIDHVVYIAGLVGIDHVGIGTDVGDLRKYSPDR
FT                   MAEFHARHPEVAIIGPGLRTDLMHPKDVGPGTLHYVIAYLVKRDFKDDEIRKVLGENAN
FT                   RVVKAVFRD"
FT   misc_feature    complement(277051..278094)
FT                   /note="HMMPfam hit to PF01244, Renal dipeptidase, score
FT                   0.0025"
FT   CDS             complement(278153..279271)
FT                   /transl_table=11
FT                   /locus_tag="BPP0903"
FT                   /product="probable ABC transporter ATP-binding protein"
FT                   /note="Similar to Rhizobium meliloti putative
FT                   spermidineputrescine ABC transporter ATP-binding protein
FT                   PotA or Rb0780 or Smb21276 SWALL:Q92VC8 (EMBL:AL603644)
FT                   (342 aa) fasta scores: E(): 2.5e-47, 57.98% id in 238 aa,
FT                   and to Agrobacterium tumefaciens ABC transporter,
FT                   nucleotide binding/ATPase protein Atu4424 or Agr_l_887
FT                   SWALL:AAL45218 (EMBL:AE009371) (341 aa) fasta scores: E():
FT                   6.4e-45, 55.46% id in 238 aa"
FT                   /db_xref="GOA:Q7W102"
FT                   /db_xref="HSSP:1G29"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W102"
FT                   /protein_id="CAE40311.1"
FT                   /translation="MKARQDYSIELRDLTLAYGERDIIRGLNLDVRRGEILSLLGPSGC
FT                   GKTTTLHAIAGLIVPRKGSVVIDGVDQTDVAINRRNVGMVFQGYALFPHMTVFDNVSYG
FT                   LRIKSVAKAEVRERTMRALALVGMEQYAQRKPRQLSGGQQQRVAIARTMVMEPRVLLLD
FT                   EPLSNLDAKLRHEIRGDLKRILRELSITSVFVTHDQEEAMFLSDRIVLMKDGAIAQLSS
FT                   PREIYNNPANSFAAAFLGNTNFIAATLLSQTPDHTGCEVSATETGQVLKGRSALRFDAQ
FT                   QPGFLSVKHDRVSYTLSHEEFLALRDRPGISTMQCRVADVHFLGHVTKVECQAGDQTMT
FT                   VLRSSACVPPDLAAGAAIYLYWPEEESLVLSL"
FT   misc_feature    complement(278627..279172)
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   2.6e-63"
FT   misc_feature    complement(278813..278857)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(279128..279151)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(279268..280041)
FT                   /transl_table=11
FT                   /locus_tag="BPP0904"
FT                   /product="putative inner membrane component of
FT                   binding-protein-dependent transport system"
FT                   /note="Similar to Rhizobium meliloti putative ABC
FT                   transporter, permease protein Ra0435 or Sma0802
FT                   SWALL:Q92ZM0 (EMBL:AE007234) (266 aa) fasta scores: E():
FT                   1.2e-28, 34.81% id in 247 aa, and to Agrobacterium
FT                   rhizogenes Riorf34 protein SWALL:Q9F5F8 (EMBL:AP002086)
FT                   (266 aa) fasta scores: E(): 4.6e-32, 36.29% id in 248 aa"
FT                   /db_xref="GOA:Q7W101"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W101"
FT                   /protein_id="CAE40312.1"
FT                   /translation="MKKALSALYIVFMCSPLLIVIGAAFEPQEILRFPPHGVSLTWFGR
FT                   VLQDPAFLDAATNSLIVGVLATVLSVALGLLSAYALARGSGRYRETILGLLLSPLVIPE
FT                   LVIGLALLQMLTLMNLATDLLTLVLAHTVICLPYTVRLLYNGVNAINESLENASLLLGA
FT                   SRGGTIIRVTLPLMKNSIVAAALFAFLTSFDNTVISLFLVDASTMTLPITIYNYVEFSL
FT                   DPAIAALSTILILLSCVVVSIISRVSGLDNMGPRK"
FT   misc_feature    complement(join(279301..279366,279433..279498,
FT                   279610..279666,279697..279762,279799..279864,
FT                   279961..280026))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BPP0904 by TMHMM2.0 at aa 5-27, 59-81, 93-115, 125-144,
FT                   181-203 and 225-247"
FT   misc_feature    complement(279385..279606)
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 4.2e-11"
FT   misc_feature    complement(279970..280041)
FT                   /note="Signal peptide predicted for BPP0904 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.878) with cleavage site
FT                   probability 0.324 between residues 24 and 25"
FT   CDS             complement(280038..280904)
FT                   /transl_table=11
FT                   /locus_tag="BPP0905"
FT                   /product="putative inner membrane component of
FT                   binding-protein-dependent transport system"
FT                   /note="Similar to Agrobacterium tumefaciens AttA2 or
FT                   Atu5127 SWALL:AAL45817 (EMBL:U59485) (300 aa) fasta scores:
FT                   E(): 6.5e-28, 35.07% id in 268 aa, and to Rhizobium
FT                   meliloti AttA2-like ABC transporter, permease protein
FT                   Ra0515 or Sma0952 SWALL:Q92ZH0 (EMBL:AE007242) (296 aa)
FT                   fasta scores: E(): 5.6e-28, 34.63% id in 257 aa"
FT                   /db_xref="GOA:Q7W100"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W100"
FT                   /protein_id="CAE40313.1"
FT                   /translation="MKQRVLFLSPALLFITLLLFVPFLYLLYLSFMDQDYLYGGPGLPG
FT                   FGNYVEAFSNPIYWESILNTFRIGATVTVATLVIGFPIAYIISVSGKALATTLTVVTVL
FT                   PLFVSVVVRGFGWIIVFGREGPLNALLLWTGLVSQPIQVLYTESAVIIALTHLLLPFMI
FT                   LPVLASLRAIDKSIIDAAMVLGSRRRDVFLHVIIPLCAPGFVVGSLLVFLHVLATFVLP
FT                   AMLGSINIKMIATLIYQQVMIVGNVPAGAALAVILFVFTMLIFGLIGALRNRLNFDSSP
FT                   VEAGQAR"
FT   misc_feature    complement(join(280092..280157,280194..280250,
FT                   280266..280331,280395..280460,280539..280604,
FT                   280644..280709,280818..280883))
FT                   /note="7 probable transmembrane helices predicted for
FT                   BPP0905 by TMHMM2.0 at aa 7-29, 65-87, 100-122, 148-170,
FT                   191-213, 218-237 and 249-271"
FT   misc_feature    complement(280179..280400)
FT                   /note="HMMPfam hit to PF00528, Binding-protein-dependent
FT                   transport systems inner membrane component, score 3.1e-08"
FT   CDS             complement(280999..282060)
FT                   /transl_table=11
FT                   /locus_tag="BPP0906"
FT                   /product="putative extracellular solute-binding protein"
FT                   /note="Similar to Agrobacterium tumefaciens ABC
FT                   transporter, substrate binding protein Atu4421 or Agr_l_890
FT                   SWALL:AAL45215 (EMBL:AE009371) (340 aa) fasta scores: E():
FT                   4.3e-16, 25.29% id in 344 aa, and to Rhizobium meliloti
FT                   putative spermidineputrescine ABC transporter periplasmic
FT                   solute-binding protein PotD or Rb0777 or Smb21273
FT                   SWALL:Q926H0 (EMBL:AL603644) (340 aa) fasta scores: E():
FT                   3.8e-17, 26.26% id in 335 aa"
FT                   /db_xref="GOA:Q7W0Z9"
FT                   /db_xref="InterPro:IPR006311"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W0Z9"
FT                   /protein_id="CAE40314.1"
FT                   /translation="MDTATRRTFLKRSAGIGLAAIGGSYLRIGHTADDHIYVTSSGGSF
FT                   LENVRKHMAEPFEKQSGVKVTLVPGTNPAHALKILSSRGTPPYDVAAFGGNDMYRLIRA
FT                   KKLAQVDEKSVPSLADVPEKFKADWEGCGSLYDYSSVGIAYRPDKIQGGVKSWKEFVER
FT                   TVAGEFGKQVFFNNLSSNVRGAEVLSMFGKIYGSGYGDIEASIATLERMKPHIFKFFTA
FT                   FNDPVVLLTSGEGAIGPGWDGRTFIAEDSTKGMVKWVDPTEGAVSSGPVMAVVKGGKED
FT                   LAKAFMNYALGEEAQKAFCEAMYYGAVNRKVQYSEKLKHRLPSIDSVQLVDTALLIKNM
FT                   SALLDLWNKRIAS"
FT   misc_feature    complement(281026..281937)
FT                   /note="HMMPfam hit to PF01547, Bacterial extracellular
FT                   solute-binding protein, score 2.6e-08"
FT   CDS             complement(282336..283220)
FT                   /transl_table=11
FT                   /locus_tag="BPP0907"
FT                   /product="probable LysR-family transcriptional regulator"
FT                   /note="Similar to Escherichia coli transcriptional
FT                   activator protein LysR or B2839 SWALL:LYSR_ECOLI
FT                   (SWALL:P03030) (311 aa) fasta scores: E(): 6.6e-37, 38.56%
FT                   id in 293 aa, and to Salmonella typhimurium and Salmonella
FT                   typhi positive transcriptional regulator LysR or Stm3014 or
FT                   Sty3158 SWALL:Q8XGD5 (EMBL:AE008838) (311 aa) fasta scores:
FT                   E(): 5.9e-35, 37.19% id in 285 aa"
FT                   /db_xref="GOA:Q7W0Z8"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7W0Z8"
FT                   /protein_id="CAE40315.1"
FT                   /translation="MNVRALEAFRAVMRTGSMTGAARIIHTTQPNISRLVSMLEAELDL
FT                   KLFIREGNKLHVTDEGAAFFKEVEQHYAGLRALKDAARTIKQLGGGRLHIAVAPALSHG
FT                   FLASAVTAFTQRHPRVTLSIRTCNSYMVEQLVNSQLCDLGLAAFIGHVTEPGLETERIA
FT                   SIRGVCLLPQAHRLASRDVIHARDLEGEPFVSIARQNGSREHVDSLFEKAKVTRKIEVE
FT                   AENASTICHLVAQGLGVSVLNAVIAEDFRCHGLVVREFRPAIHFPITLLRSSHRPRSLL
FT                   VAAFIDCLGAVLN"
FT   misc_feature    complement(282342..282965)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 1.3e-47"
FT   misc_feature    complement(283035..283214)
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 2.2e-20"
FT   misc_feature    complement(283080..283172)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    complement(283449..283454)
FT                   /note="Duplication due to IS1002 insertion"
FT   CDS             complement(283450..284400)
FT                   /transl_table=11
FT                   /locus_tag="BPP0908"
FT                   /product="transposase for IS1002"
FT                   /note="transposase for IS1002 element"
FT                   /db_xref="GOA:Q7TT87"
FT                   /db_xref="InterPro:IPR001584"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TT87"
FT                   /protein_id="CAE40316.1"