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EBI DbfetchID BX572602; SV 1; linear; genomic DNA; STD; PRO; 349981 BP. XX AC BX572602; XX DT 09-DEC-2003 (Rel. 78, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 7) XX DE Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 XX KW complete genomes. XX OS Rhodopseudomonas palustris CGA009 OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. XX RN [1] RP 1-349981 RX DOI; 10.1038/nbt923 RX PUBMED; 14704707. RA Larimer F.W., Chain P., Hauser L., Lamerdin J., Malfatti S., Do L., RA Land M.L., Pelletier D.A., Beatty T.J., Lang A.S., Tabita F.R., RA Gibson J.L., Hanson T.E., Torres y Torres J., Peres C., Harrison F.H., RA Gibson J., Harwood C.S.; RT "Complete genome sequence of the metabolically versatile photosynthetic RT bacterium Rhodopseudomonas palustris"; RL Nature Biotech 22(1):55-61(2004). XX RN [2] RP 1-349981 RG Rhodopseudomonas genome consortium RA Larimer F.W., Harwood C.S.; RT ; RL Submitted (24-JUL-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Rhodopseudomonas genome consortium, the DOE RL Joint Genome Institute, Production Genomics Facility, 2800 Mitchell Drive, RL Walnut Creek, CA 94598, USA, and the Genome Analysis Group, Oak Ridge RL National Laboratory, 1060 Commerce Park Drive, Oak Ridge, TN 37831, USA; RL larimerfw@ornl.gov. XX DR EMBL-CON; BX571963. DR RFAM; RF00005; tRNA. XX FH Key Location/Qualifiers FH FT source 1..349981 FT /organism="Rhodopseudomonas palustris CGA009" FT /strain="CGA009" FT /mol_type="genomic DNA" FT /db_xref="taxon:258594" FT CDS 228..1463 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2769" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160 COGs COG2199" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N649" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28211.1" FT /translation="MSLDISTLFLVATLICALLGVMLHYFGRQEKMPALNWWGNAYLLG FT AITVALWTILSPIFGEAITLAMASIGFIACGMMWNAARVFHGLKPNWPGLFLGALAWLA FT AVASLPPEQEALRMTIGAAIVAAYAGLTASQLAAERRKSMHRRWPTIVVPLLHGAALML FT PIVLADLWPSPHSGFAGNVWVVLFAVELVLYAIGTVFVIFMLVSERSVSLHKTAASLDP FT LTGMLNRRGFSEACARMIEREAMAGRPVSALIFDIDHFKSINDRFGHPAGDEVLKLFAA FT IVTNSLRISDLSGRIGGEEFAALLPCPIDEAVTAADRVREAFQNCGIEVDDAPVATTVS FT IGVAGGPAAVELEVLLAAADTALYQAKRGGRNRVVATVEQPVSLEESRRKAAQTREHQV FT VARGSEVGQAVA" FT misc_feature order(240..308,327..386,414..482,501..554,582..641, FT 678..731,774..842) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 1542..1844 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2770" FT /product="conserved unknown protein" FT /function="COGs COG2329" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N648" FT /db_xref="InterPro:IPR007138" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/TrEMBL:Q6N648" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28212.1" FT /translation="MITEIAQIDVKPGSEADFEAAVAKAREAFGRSKGFCGFELHKSIE FT KPQRYRLMVKWQTLENHTVDFRGSENFTEWRGLVGGFFAAPPDVEHTETVLTSQA" FT CDS complement(1828..2994) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2771" FT /product="possible transport protein/permease" FT /function="InterPro IPR002549 COGs COG0628" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:Q6N647" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28213.1" FT /translation="MKGPPVTATLPDRAPSRTDLAWAIALGGIATVSFAALLYAAWQFA FT GTLFLIFAGVLFGVFLNALTELTGKLVGGPHGLRLALICLVLTGLTIGVAFLGGNTISQ FT QAKALSGTIKTQIVNVKALLERNGVDTGFLELNPTPSAAHPETTTPVQPRNLPSAGEIA FT SGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPSVYRNGLVRMVPRRYRAQADV FT IVTDTGEMLKRWLLAQLITMMAVFAVTATGLSLIGIPGAFILGIQAGLLAFIPTVGAIL FT GGLIIVLAAIGSGWIAVVSAFVLFLGVHALESYILTPLIQRQAIDIPPATLFAMQILLG FT IVFGLWGLALALPLMAIGRVVLDHLRGEEPAELISPAGTAPLAITPET" FT misc_feature complement(order(1939..2004,2044..2109,2122..2187, FT 2227..2292,2401..2466,2701..2766,2797..2862,2869..2934)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 3241..4188 FT /codon_start=1 FT /transl_table=11 FT /gene="rlpA2" FT /locus_tag="RPA2772" FT /product="rare lipoprotein A" FT /function="InterPro IPR005132 COGs COG0797" FT /db_xref="InterPro:IPR005132" FT /db_xref="InterPro:IPR009009" FT /db_xref="InterPro:IPR012997" FT /db_xref="UniProtKB/TrEMBL:Q6N646" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28214.1" FT /translation="MGIRERDSKGRAARVVLAAGACLVLANCAQNGQFSRIDPKYGVSS FT SPRVVAFGEPVPKGGGTYRVGKPYVVAGRTYVPEENPHYRAEGLASWYGDDFHGRLTAN FT GEVFDMASLSAAHPTLPIPSYARVTNMANGRSLIVRINDRGPYHGNRLIDVSNKAAELL FT EFKHRGTAKVRVEYVGRAPLEGSDDRQLIATLRQGEPAPAPTGVRIASAKPFVPDFGSA FT SASSGGGRIRGDIPLPEGRPYSLGNTSMDVASVGATTEVSASRSTRSNRQALAPNPRAV FT SYNVGSEEADSEPASAPVRRNDEIGNLLSARGLY" FT sig_peptide 3241..3336 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.655) with cleavage site probability FT 0.450 atresidue 32" FT CDS complement(4217..5167) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2773" FT /product="epoxide hydrolase" FT /function="InterPro IPR000073:IPR000379:IPR000639:IPR002410 FT COGs COG0596" FT /EC_number="3.3.2.3" FT /db_xref="GOA:Q6N645" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR000639" FT /db_xref="UniProtKB/TrEMBL:Q6N645" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28215.1" FT /translation="MASTRSTITANGIELFLREQGEGPLVVLCHGWPELSYSWRHQIGA FT LADAGYHVVAPDMRGFGRSSAPQAVEAYSIFDLVGDMVALVAELGETRAAIIGHDWGAP FT VAWHAAQFRPDLFAAVAGLSVPPPWRGKGPPLDQLRAAGITNFYWQYFQKLGVAETEFE FT RDVASTMRGMLCGGFADPGRSLFVPEGRGFIGRSAASLPLPPWLTEAELAFFIEQYKQS FT GFRGGLNWYRNIDRNWELTSPWQGAPIHQPAAFIAGSNDPVISDKMSGKHLAAINRVLP FT NLKQKLIIDGAGHWIQQEKPAEVNAALIEFLKENY" FT CDS 5312..6553 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2774" FT /product="penicillin binding protein" FT /function="InterPro IPR001967 COGs COG1686" FT /EC_number="3.4.16.4" FT /db_xref="GOA:Q6N644" FT /db_xref="InterPro:IPR001967" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR012907" FT /db_xref="InterPro:IPR015956" FT /db_xref="InterPro:IPR018044" FT /db_xref="UniProtKB/TrEMBL:Q6N644" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28216.1" FT /translation="MSVLTSLLSPRSSLWRGLLAGLIAVAVGAGPVTAANQSVQGAKKD FT DSGFEAQAPSAILVDAESGSVLFEKNADELRAPSSMMKLMTVETVFHLLKTGDLQLTQE FT YRVSENAWRNGGAPAGGSTMFAEIHSIISVDNLLHGAIIQSGNDSCMVLAEGIAGSEAA FT FVEQMTKRARAIGLTQSTFANSTGLPNPDNKMSVRELAKLARHIILTYPEYYPLFGEKE FT FTWNKIRQTNRNPLLNAMPGADGFKTGYTKEGGYGMVGSAVQNGMRLIVVVNGLDDADD FT RASEAKKLLEWGFRNFESRSLFANDATIGYARVFGGEKRYVPLTPAEPVRVMVRKNGSD FT KLIARIVYQGPVPAPVESGQRVGMVRVWRGPNLAVEVPLKAAEADPVGPTMRRALDGAS FT ELTIGLVRAGMAKL" FT sig_peptide 5312..5416 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.997 atresidue 35" FT misc_feature 5348..5416 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 6556..7248 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2775" FT /product="thymidylate kinase" FT /function="InterPro IPR000062:IPR001687 COGs COG0125" FT /EC_number="2.7.4.9" FT /db_xref="GOA:Q6N643" FT /db_xref="HSSP:2CCK" FT /db_xref="InterPro:IPR000062" FT /db_xref="InterPro:IPR018094" FT /db_xref="InterPro:IPR018095" FT /db_xref="UniProtKB/Swiss-Prot:Q6N643" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28217.1" FT /translation="MVQKKPINRSLRGRFITFEGGEGAGKSTQIRLLAKRLEKARLRTL FT VTREPGGSPGAEAIRSALLAGIGKLIGGADAEALLFAAARDDHVRTLIEPALARGEWVL FT CDRFYDSTRAYQGKLGAVSLDLLNALQQVTIGDMKPDLTVILDIPVEIGLARAAVRRGS FT ETPDRFESEAIDFHRGLREVFRQIAAQEPERCVLIDANAEPEEVADRIWQAVRLRLLEP FT ARAGAKSA" FT CDS 7245..8300 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2776" FT /product="probable DNA polymerase III, delta prime subunit" FT /function="InterPro IPR000862 COGs COG2812" FT /EC_number="2.7.7.7" FT /db_xref="GOA:Q6N642" FT /db_xref="HSSP:1A5T" FT /db_xref="UniProtKB/TrEMBL:Q6N642" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28218.1" FT /translation="MSTRKASSKAAAPESTIRHPRETTELYGHHAAEQALLDAYRGGRI FT AHAWLIGGAQGIGKATLAYRMARFVLTHREPQSDAVQSAASLAIDPDHPVARHIAAEAH FT GGLLTLERSVNDKGVLRNVITVDESRETISFFGATAAIDGWRVCIVDTVDDLNANSANA FT LLKVIEEPPQRSLFLLLSNAPARVLPTIQSRCRKLMLRPLATADVIAAAADAAGVERDD FT PQLGEAAAASEGSVARALMLMGGGALTLQQTTTALLDSLPNVDPRALHALGDAIGGTDR FT ATLAAFVDGVDRWVAARLRTPDPNAELPRLARLAEVWEKIGRAARDTEAYNLERKPLVF FT SVFGLLAEAVR" FT CDS 8381..9925 FT /codon_start=1 FT /transl_table=11 FT /gene="metG" FT /locus_tag="RPA2777" FT /product="methionyl-tRNA synthetase" FT /function="InterPro IPR001412:IPR002300:IPR002304 COGs FT COG0143" FT /EC_number="6.1.1.10" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N641" FT /db_xref="HSSP:1A8H" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002304" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR014758" FT /db_xref="InterPro:IPR015413" FT /db_xref="UniProtKB/TrEMBL:Q6N641" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28219.1" FT /translation="MAQRNSFYITTAIAYPNGAPHIGHAYEAIATDALARFQRLDGKDV FT FFLTGTDEHGLKMIQTAQKEGLTPHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHR FT SVQEVWKRMQDKGDIYLDSYSGWYSVRDEAYYAEDETVVGDDKVRRGPQGTPVEWVEEK FT SYFFKLSAYQDKLLKLYEDQPDFIGPDSRRNEVISFVKSGLKDLSVSRTTFDWGVKVPG FT DPEHVMYVWVDALTNYISGVGFPDENDKNWHYWPADVHVIGKDIIRFHAVYWPAFLMSA FT GIPVQKRVYAHGFLFNKGEKMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGSDGSY FT NHEAIVNRINADLANDLGNLAQRSLTMVAKQCEGKVPEHGAFSETDSAILAMADAMITQ FT ARTAMATQQIHQALNAVWAVVAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQIA FT ILAQPAIPTAAAKLLDILGIAEGQRDFAALATRIVPGTPLPAPAPIFPRYVEPATA" FT CDS 9929..10717 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2778" FT /product="possible deoxyribonuclease" FT /function="InterPro IPR001130 COGs COG0084" FT /db_xref="GOA:Q6N640" FT /db_xref="HSSP:1J6O" FT /db_xref="InterPro:IPR001130" FT /db_xref="InterPro:IPR012278" FT /db_xref="InterPro:IPR015991" FT /db_xref="InterPro:IPR015992" FT /db_xref="InterPro:IPR018228" FT /db_xref="UniProtKB/TrEMBL:Q6N640" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28220.1" FT /translation="MLVDSHCHLDFPDFADDLAGIVARAEASGVGRMVTISTRVRKLPD FT LVAIAERFPTVYCSVGTHPHHADEEDGIATDELVKLAQHPKVVAFGEAGLDYFYEMGSR FT EAQERGFRAHIAAARETGLPLVIHTREADEDCGKILEDEMGKGAFRAVLHCYTGGRDLA FT MQAIDLGLMISFTGILTFKKSQALRDLAAELPADRVLVETDSPYLAPGKYRGKRNEPSY FT VVETAKVLAEVRGVSLDEIARQTTENFFRLFGKVPAPAAA" FT CDS 10743..11546 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2779" FT /product="possible hydrolase" FT /function="COGs COG1235" FT /db_xref="GOA:Q6N639" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q6N639" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28221.1" FT /translation="MTLTLTILGSGSSAGVPRPALGWGAADPSNPKNRRLRCSLLAERI FT TPEGGITRVLIDTSPDLREQLISADVDHLDAVFLTHEHADQTHGIDDLRSVVMAMKRRI FT PVYLNQSTGEHVLYRFAYCFKQAPGSSYPAILESREIEAGDSKTIAGAGGDLTLTAFLL FT QHGDIPALGYRIAGAAYTPDVHDIPEQSFPALEGLDLWIIDGLRYKHHASHFNIETALK FT WINRFKPKRAVITNMHADIDYETLRKELPDGVVPGFDGMRLEIAG" FT sig_peptide 10743..10811 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.785) with cleavage site probability FT 0.714 atresidue 23" FT CDS complement(11741..13390) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2780" FT /product="possible AMP-binding enzyme" FT /function="InterPro IPR000873 COGs COG0318" FT /db_xref="GOA:Q6N638" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:Q6N638" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28222.1" FT /translation="MSTPQGHYSIGLDKTPANFVPLSPLSFLERTANVYPEMTSVVYEG FT RHYTWKETRARCRRFASWLTRSGIGRGDTVAVMLPNVPAMVEVHFAVPMAGAVLNALNI FT RLDAAAIAFQLDHGGAKIILVDPEFSSVVAEALKLMTKPKPLVIDVDDKMYPGSHRIGE FT LEYEYAVASGDPTFAGHRPEDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNILAG FT NLGQHPVYLWTLPIFHCNGWCFPWTLAAAAGINVCLRKVDPAKIFELIPKHGVTHMCGA FT PIVYNALINAPEAPKGVPTKPVVGLIAGAAPPMAVLAGAETIGIKLTHVYGLTEVYGPA FT SVCAEQPGWDELPVAERAKLKRRQGVPYPMQEAVTVLNPETMQEVPRDGETIGEVMFRG FT NIVMKGYLKNEKATKEALAGGWFHTGDLGVLDADGYVIIKDRSKDIIISGGENVSSVEV FT EDVLYKHPAILFAAVVAKPDPKWGEVPCAFVELKDGASATEAEIIAYCREHLPGFKTPK FT SIVFSSIPKTSTGKIQKFMLRDQVKSAKAILE" FT CDS complement(13445..15328) FT /codon_start=1 FT /transl_table=11 FT /gene="dctQ2" FT /locus_tag="RPA2781" FT /product="TrapT dctQ-M fusion permease, dicarboxylate FT transport" FT /function="COGs COG1593" FT /db_xref="InterPro:IPR007387" FT /db_xref="InterPro:IPR010656" FT /db_xref="UniProtKB/TrEMBL:Q6N637" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28223.1" FT /translation="MASADASQLTAGERLHAPQRKTLIGALEAALGLMVEIPAAILVVV FT EIVVLFAGVVSRYVFHSPLIWSDELASILFLWLAMFGAAVAFRRGEHMRMTAMVAGASP FT RLRAWLDLVGICAALAFLLLIAAPAYEYAYEESYITTPALSLANSWRAAALPVGIALMA FT LFAALRLIRFGDLKLVVGAALTVALLIGAFWLAQPLFKPLGNLNLVIFFVGVVACCVFA FT GVPIAFGFGLAIYGYLALTTTTPLLILVGRMDEGMSHLILLSVPLFVFLGLLIEMTGMA FT RAMVAFLASLLGHVRGGLHYVLVGAMYLVSGISGSKAADMAAVAPVLFPEMKERGAKPG FT DLVALLSATGAQTETIPPSLVLITIGSVTGVSISALFTGGLLPGVVLAIMLSALVWWRY FT RGEDLSHVKRARGSEIGKAFIVALPALALPFVIRAAVVEGVATATEVSTIGIVYAVVVG FT ILVYRKFDLRRLRPMLVETAALSGAILLIIGTATGMAWGLTQSGFSRALAAAMTGLPGG FT SATFLAVSIVAFVILGSVLEGIPAIVLFGPLLFPIARAVGIHEVHYAMVVILAMGIGLF FT APPFGVGYYAACAIGRVDPAEGMRPIWGYMLALLIGLIVVAAIPWISIGFL" FT misc_feature complement(order(13457..13522,13562..13627,13673..13738, FT 13745..13810,13841..13906,13943..14008,14021..14074, FT 14138..14203,14399..14464,14504..14560,14576..14626, FT 14633..14698,14729..14794,14816..14878,14939..15004, FT 15068..15118,15164..15229)) FT /note="17 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(15341..16360) FT /codon_start=1 FT /transl_table=11 FT /gene="dctP2" FT /locus_tag="RPA2782" FT /product="TrapT family, dctP subunit, C4-dicarboxylate FT periplasmic binding protein" FT /function="InterPro IPR004682:IPR006311 COGs COG1638" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N636" FT /db_xref="InterPro:IPR004682" FT /db_xref="InterPro:IPR006311" FT /db_xref="InterPro:IPR017909" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q6N636" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28224.1" FT /translation="MSFSRRSLLKASAAAAAIGGIGAPWVARAAEAEFKYKYANNLPDT FT HPLNVRAREMSAAIKAETDGKVQIDVFPNNQLGSDTDMLSQIRAGGVEFFTLSGLILST FT LVPAASINGIGFAFPDYETVWKAMDGELGGYVRGEIQKAGLMVMDKIWDNGFRQTTSST FT KPINGPDDFKGFKIRVPVSPLWTSMFKAFDAAPASINFSEVYSALQTKVVEGQENPLVL FT ISAAKLYEVQKYCSLTNHMWDGFWFLANRRAWEKLPPDVRTIVAKHINAAAVKEREDTA FT KLNATVKEELTAKGLIFNQPPVMPFRDKLRSAGFYAEWKGKYGDQAWSLLEKSVGKLA" FT sig_peptide complement(16271..16360) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.961 atresidue 30" FT CDS complement(16725..17315) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2783" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N635" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28225.1" FT /translation="MKPYVGTRGSDAVWPPEIWQVLRRHRLNERTRRLRKSAETATLGH FT RTSNQTQLVVRNRLVKRGCIGRSGADLSQSARGCAWWLRIGSAQGGGQRQLRCFASPTA FT VTALSELSVVTAAQRAKKRVHLGASPRSSRGNADLALGKPSTPASLLDPIHDSHKVYYG FT IYRYDSFTRGLCGIQKVKPAKCVRCLRSLDIAR" FT CDS 17616..18311 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2784" FT /product="possible nodulin-related protein" FT /function="COGs COG1814" FT /db_xref="InterPro:IPR008217" FT /db_xref="UniProtKB/TrEMBL:Q6N634" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28226.1" FT /translation="MHPLHRENHLINRIGWLRAAVLGANDGIISTASLVVGVAAAATSS FT EEVLLAGVAGLVAGAMSMAAGEYVSVSSQSDTEQADLARERKELADAPDSELDELTKIY FT VDRGLEPALARQVAEQLSAKDVFAAHARDELGLSAHVVARPVQAALTSALTFSVGAALP FT IGIVLLAPTGSTSMVVSGGSLICLAILGAVSAHIGGAGLLKPTLRVTFWGALAMAASAA FT IGALVGHTI" FT misc_feature order(17676..17744,17757..17825,18057..18125,18153..18221, FT 18240..18299) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(18405..19742) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2785" FT /product="possible flavodoxin oxidoreductase" FT /function="COGs COG1018" FT /db_xref="GOA:Q6N633" FT /db_xref="InterPro:IPR001221" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR013112" FT /db_xref="InterPro:IPR013130" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/TrEMBL:Q6N633" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28227.1" FT /translation="MQTVRLKVAFAGVIGGLSGLWLLSLAPDAWQQGFWETRATLVYGC FT GVLALGLMSVGVILAARPVWFETPLGGLDKFYRLHRWLGISALGFALVHWLLREGPSWI FT TELGLVALPPKPAHPQEDAALGFDLFRDLKHPAAEVGEWALYALVVLVAIALWKRFPYK FT YFFWTHRLMPLVYLALVFHAFILIDKSYWTKPLGPVLACLLIAGTVAAVIALFRRIGSS FT RKASGTIATLSLYDDNQMLEVGVRLETAWRGHEAGQFAFVDFDDAEAAHPFTISSSWQN FT DGLLMFSIKGLGDYTRSLAGSLHVGQGVVVEGPYGRFNFEDDSGRQIWIGGGVGVTPFI FT ARLKQLVGGGQSNPVDLFYATDTPDPGFVAPIAQLARQSGIAFHVVDGSQGDRLTLEKL FT AALVPEWKQADVWFCGPSGFGDAMRRAMMAQGLPASRFHQESFEMR" FT misc_feature complement(order(19095..19154,19185..19250,19272..19322, FT 19452..19496,19560..19625,19671..19721)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(19662..19742) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.893) with cleavage site probability FT 0.417 atresidue 27" FT CDS complement(19833..20576) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2786" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N632" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28228.1" FT /translation="MHRGESHHVNRNNHSRHPDHRAVRWLHGDRRRAFLRHRILRRRGA FT WARDRHPADPAFARKALIADPRDISRRFPRLRQALNDTSSTPKKERAMRKAITSLATAA FT LLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLTPEQDKNWAGVQ FT GALVDVWRKRAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLKKLADAAQPLY FT ASLDDQQKRRFTEALFQRHRDRRSD" FT CDS 20858..21916 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2787" FT /product="putative signal transduction histidine kinase FT with PAS/PAC domain" FT /function="InterPro IPR000014:IPR000700:IPR001610 COGs FT COG0642" FT /db_xref="GOA:Q6N631" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000700" FT /db_xref="InterPro:IPR001610" FT /db_xref="InterPro:IPR011102" FT /db_xref="InterPro:IPR013655" FT /db_xref="UniProtKB/TrEMBL:Q6N631" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28229.1" FT /translation="MVAMSSFANKSEHQKVAEAEIESFRNELGPFVVAAETTRMAMLFA FT DAERSNCPIIFANDSLLSLTGYDRDEVLGRSLAFMLVHDADRETLAQLAGKFGGTSDKG FT VEFLCRRKDDSEFWAAVFISPVRDEAGTVIQYFASFVDLTKHKEDEARSKMLIDELNHR FT VKNVLATVQAIVWQALRTSSDPKTIQQAIESRLVALSRSHDLLTRENWESAGLHDIIAN FT ALEPFERADGLSGRIFIAGDNVRFPPKAALALGIVFNELATNAVKYGALSTDNGALHID FT WKTVSSPEGQRVLLQWREAGGPVVAAPSRRGFGSRVIDRVLAHELAGEVRMDFLADGLI FT CSCSLLVPKDAG" FT CDS complement(21947..22693) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2788" FT /product="possible methyltransferase" FT /function="InterPro IPR000051 COGs COG0500" FT /db_xref="GOA:Q6N630" FT /db_xref="InterPro:IPR013216" FT /db_xref="InterPro:IPR017031" FT /db_xref="UniProtKB/TrEMBL:Q6N630" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28230.1" FT /translation="MDIPRIFNISESAHRIHNPFTAEKLAMLGASLRMEPGTRVLDLGS FT GSGEMLCTWARDYGITGTGIDMSRLFSEQAKLRARELGVADRVTFVHGDAAGYVADETV FT GVAACVGATWIGGGVSGTIELLARSLRDGGIILIGEPYWLQLPPTEEVAQGCRARAISD FT FLLLPDLVASFGALNYDVVEMVLASQDSWDRYEAAKWLTMRRWLDANPDDDFAADVRAE FT LTSSPERYARYGRDYLGWGVFALMAR" FT CDS 23135..26062 FT /codon_start=1 FT /transl_table=11 FT /gene="phaA" FT /locus_tag="RPA2789" FT /product="pH adaptation potassium efflux system components FT phaA and phaB" FT /function="InterPro IPR001516:IPR001750:IPR003916 COGs FT COG1009" FT /note="Citation: Putkorny et al. (1998) Mol. Microbiol. FT 28:1091-1101" FT /db_xref="GOA:Q6N629" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003916" FT /db_xref="InterPro:IPR007182" FT /db_xref="UniProtKB/TrEMBL:Q6N629" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28231.1" FT /translation="MPQNVYLLAVILLPFAGSLLAALLPANARNAEAWLAALVALGCLA FT LLVLLYPGAETVPIRYQLEWLPQFGLNFTLRLDGFAWAFACLITAIGALVVLYARYYMS FT PSDPVPRFFSFLLGFMGAMLGIVLSGNLIQLVFFWELTSLFSFLLIGYWHHNAAAREGA FT RVALTITGTGGLCLFAGVVVLGHIVGSYDLDAVLSAGTEVRGHALYVPTLILILLGALT FT KSAQFPFHFWLPRAMTAPTPVSAYLHSATMVKAGVFLLVRLWPVLGGTNEWLWIVGTTG FT LATFIVGAYLAVFQRDLKGLLAYSTISHLGLITLLIGLDRPLALVAAIFHIFNHATFKA FT SLFMAAGIIDHETGTRDLRRLSGLWKFMPKTGALAIVAASAMAGVPLLNGFLSKEMFFA FT ETIETHDGSMLDDALPYIVTLASMFTVAYSLRFIREVFFGPPPVDLPRTPHEPPRWMRF FT PVELLVLTCLVVGIVPSLTIGPFLQLAVHAVLGAATPYYSLAVWHGFNWPLLMSVIALV FT GGVLLYLMLREPLQQGLTSSLFAGRFKTQRVFDLVLVTVSWRWARAIERVFGTRRLQPQ FT LLLLVCVALIAATVPVLTRGLSLAPVALGGIDPALAVVWSVGIACALGGTAVAKFHRLA FT ALILIGGSGLTTCLTFVWFSAPDLALTQIGVEIVTTVLLLLGLRWLPKQLETGEITANR FT SVLKLVQRIRDLAVAAAAGIGVALLAYAVMTRAAPDSIAQFFMRHAYADGGGTNVVNVI FT LVDFRGFDTLGEITVLAVVALTVFALLRRFRPAADSIDIPEQQRLQDEHDDADADRRKG FT DTIADYLAVPAMIMQLLFPFIFIAAMYLLLRGHDQPGGGFVAGIAMAAALILQYMAGGA FT RWIEARLRIHPLRWIAIGLLLALFTGAAALPLARPFLTSAFAYAEIPWIGKVPLASAAL FT FDLGVFSLVVGATALMLLALAHQSIRGHRRPSGGRAATPEVSRWN" FT sig_peptide 23135..23200 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.564 atresidue 22" FT misc_feature order(23147..23215,23234..23293,23372..23440,23459..23518, FT 23528..23596,23630..23698,23741..23800,23861..23929, FT 23957..24016,24035..24088,24116..24184,24245..24313, FT 24371..24424,24518..24586,24644..24712,24863..24931, FT 24959..25018,25037..25096,25109..25177,25250..25318, FT 25421..25474,25589..25657,25685..25753,25790..25858, FT 25916..25984) FT /note="25 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 26053..26394 FT /codon_start=1 FT /transl_table=11 FT /gene="phaC" FT /locus_tag="RPA2790" FT /product="pH adaptation K efflux system component" FT /function="InterPro IPR006672 COGs COG1006" FT /note="Citation: Putkorny et al. (1998) Mol. Microbiol. FT 28:1091-1101" FT /db_xref="GOA:Q6N628" FT /db_xref="InterPro:IPR001133" FT /db_xref="UniProtKB/TrEMBL:Q6N628" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28232.1" FT /translation="MELIVSLAIAVLTGSGVWLLLRPRTFQVIIGLALLSYAVNLFIFS FT MGRLKVGAAAVLEKGQIADPHAFADPLPQALVLTAIVISFATTALFLVVLLASRGLTGN FT DHVDGRDHE" FT misc_feature order(26062..26115,26134..26193,26275..26343) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 26391..28025 FT /codon_start=1 FT /transl_table=11 FT /gene="phaD" FT /locus_tag="RPA2791" FT /product="putative component of pH adaptation K-efflux FT system phaD" FT /function="InterPro IPR001750 COGs COG0651" FT /note="Citation: Putkorny et al. (1998) Mol. Microbiol. FT 28:1091-1101" FT /db_xref="GOA:Q6N627" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:Q6N627" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28233.1" FT /translation="MTSWTDHLIILPILLPLFVGAVMLLIDERYQQIKAFANLASIVMM FT GIIALLLMRAADVTTATGTAPIAVYRLGDWPAPFAIVLVADRLSALMLALTSVLAFAST FT IFATARWHRVGAHFHSLMQFLLMGLNGAFLTGDLFNLFVFFELLLAASYGLVLHGSGQA FT RVRAGLQYIAINLTASVLFLIGVSLIYAVTGTLNMADLAIRIPQVPTQDRALLEAGAAI FT LGVAFMVKAGMWPLCFWLPTTYAAAAAPVAAIFAIMSKVGIYILLRLSLLFFGAGSGAS FT ALFGSEWLVAAGIATILFGLIGALASQEISRLAGYAVLVSSGTVLAVAAAAGTAAVTAS FT ALFYLVSSTLAIAAFFMLIELLERGRDPGADMLAVTREAYGEDMPDDPDAEEVGMVIPA FT SMAILGWCFVGCAAVIAGLPPVSGFIAKFSMLTALLSGDTGSSITPLHWTLLALLMLSG FT LTMLIAMTRAGIRTLWSPTERADPRIRLAEIVPIALLLLGCAAMTVQPQAAMTYMQGAA FT KSLHTPAAYIDSVLAPAQTRVKLGGGS" FT misc_feature order(26400..26468,26487..26555,26625..26693,26730..26798, FT 26811..26864,26901..26969,27042..27110,27129..27197, FT 27240..27308,27327..27395,27408..27476,27600..27668, FT 27726..27785,27846..27914) FT /note="14 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 28022..28510 FT /codon_start=1 FT /transl_table=11 FT /gene="phaE" FT /locus_tag="RPA2792" FT /product="putative component of pH adaptation K-efflux FT system phaE" FT /function="InterPro IPR002758 COGs COG1863" FT /note="Citation: Putkorny et al. (1998) Mol. Microbiol. FT 28:1091-1101" FT /db_xref="GOA:Q6N626" FT /db_xref="InterPro:IPR002758" FT /db_xref="UniProtKB/TrEMBL:Q6N626" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28234.1" FT /translation="MSRVLPFPLISLCLLAMWLWLSQSIALGPILLGSLFALIGGWLLS FT LLQSDSDRVRNPGAIIRLTGLVLIDVVRSNIAVASIILGGQRDNITSGFVDIPLQLSSR FT QGLAVLACIITSTPGTLWVNFTRETGVLQLHVLDLVDESEWVDRIKGRYERLLLEIFE" FT sig_peptide 28022..28102 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.981) with cleavage site probability FT 0.769 atresidue 27" FT misc_feature order(28025..28084,28094..28162) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 28507..28788 FT /codon_start=1 FT /transl_table=11 FT /gene="phaF" FT /locus_tag="RPA2793" FT /product="pH adaptation potassium efflux system phaF" FT /function="COGs COG2212" FT /note="Citation: Putkorny et al. (1998) Mol. Microbiol. FT 28:1091-1101" FT /db_xref="GOA:Q6N625" FT /db_xref="InterPro:IPR007208" FT /db_xref="UniProtKB/TrEMBL:Q6N625" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28235.1" FT /translation="MSSVVLTWSVVIAQVMLALAMACAAYRMLVGPRAQDRVLGLDTLY FT VNAMLLMLTVGIRTGTDVYFEAALVIALLGFVGTVALSKFLMRGEVIE" FT sig_peptide 28507..28575 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.864) with cleavage site probability FT 0.574 atresidue 23" FT misc_feature order(28516..28584,28618..28686,28696..28764) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 28827..29156 FT /codon_start=1 FT /transl_table=11 FT /gene="phaG" FT /locus_tag="RPA2794" FT /product="putative pH adaptation potassium efflux system FT component phaG" FT /function="InterPro IPR005133 COGs COG1320" FT /note="Citation: Putkorny et al. (1998) Mol. Microbiol. FT 28:1091-1101" FT /db_xref="GOA:Q6N624" FT /db_xref="InterPro:IPR005133" FT /db_xref="UniProtKB/TrEMBL:Q6N624" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28236.1" FT /translation="MALLLLLGAGITLIGSLGLLRLRGFYQRAHAPTLGTTLGTAFIIG FT ASMLCFSLLQMRPLLHEVLILGFVTITTPVTLMLLVRAALFRDTAEGRIEDHGPHGGPQ FT PSNDE" FT misc_feature order(28836..28901,28920..28988,29016..29084) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(29181..29963) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2795" FT /product="Protein of unknown function UPF0001" FT /function="InterPro IPR001608 COGs COG0325" FT /db_xref="InterPro:IPR001608" FT /db_xref="InterPro:IPR011078" FT /db_xref="UniProtKB/TrEMBL:Q6N623" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28237.1" FT /translation="MPASPDLLPDEIARFGADPAAAFAANLTSVQERIAAACHRCGRSA FT GEVRLLPVTKTVPAGVLLRAYAAGISEFGENKLQEARDKRDILADLPIRWSIIGHLQTN FT KVKYLVRFAAEFHALDSPRLADELNRRLDAEGRDLDVFVQVNTSGEASKYGLAPCDLVP FT FIERLSDYPRLKPRGLMTLAIFSAETGRVRGCFRLLRELRDRAIRVHPDLTELSMGMSG FT DFEIAIEEGATVVRVGQAIFGARPTTDRFYWPHASVDR" FT CDS complement(29984..31288) FT /codon_start=1 FT /transl_table=11 FT /gene="glyA2" FT /locus_tag="RPA2796" FT /product="glycine hydroxymethyltransferase" FT /function="InterPro IPR001085 COGs COG0112" FT /EC_number="2.1.2.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N622" FT /db_xref="InterPro:IPR001085" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR019798" FT /db_xref="UniProtKB/Swiss-Prot:Q6N622" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28238.1" FT /translation="MGPSVAPHAVHTIANPGVSAAGLVAADHAVAAAIADEETRQRDSI FT ELIASENFVSRAVLDAQGSVLTNKYAEGYPHRRYYGGCANVDAIEDLVIARVNQLFGSA FT YANVQPHSGSQANQAVFLALLAPGDTILGLDLKAGGHLTHGAPVNMSGRWFKAVSYGVD FT PETHRIDMDQVAVQARQHRPRLLIAGGSAYPRIIDFGRFRQIADEVGAILMVDMAHFAG FT LVAGGVYPSPVPFADVVTSTTHKTLRGPRGGFVLTNDANIAKKINSATFPGLQGGPLMH FT VIAAKAVAFGEALQPEFGAYAQAVVENCRVLAQALADGGLTITSGGTDCHLAVVDLRPF FT GVTGNIAEQALESVGITLNKNAIPNDPEKPMVTSGIRVGTAAGTSRGFGADQYREIAGL FT VLETLHAVRAGTLDAAGQEINKSVRRLAASFPLPY" FT CDS complement(31442..32893) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2797" FT /product="transcriptional regulator, GntR family with FT aminotransferase domain" FT /function="InterPro IPR000524 COGs COG1167" FT /note="Citation: Rossbach et al. (1994) Mol. Gen. Genet. FT 245:11-24" FT /db_xref="GOA:Q6N621" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q6N621" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28239.1" FT /translation="MAHPAHAAMPLHARVQRAIRQLIVDGVLGAGKPLPASRALAQSLG FT VSRDTIEVAYGQLHAEGFIERRVGSGSFVAEMTEFAPGRRLSQRDALHRNQAPKLSKRG FT TAMFGSGGIREQLLPRPFVHGVPETRTFPLPLWERLERQVRKELGAQTLLHCDPQGTEP FT LRRAIADYVNLERGARASADRVLVLTSSQQALSLCANMLLDPGDRVFIEDPAYYGARKA FT FDAAGLECVPIPVDRQGLVVDQITAQPRRAKAVFLTPSHQFPTGATLALDRRLALIEWA FT ARHQTWIIEDDYDSEFHYAGKPTACVQGLDPHDRTVYIGTFTKSLFPGLRIGYVVLPPQ FT LVKPMTVARTLLDGHSASMAQLTLARFMEGGHFGAHVRTMRGVYAQRLDVLVRLVRKYL FT SGFVEPRVPVGGLQLPCVLTCDLAERTVVDAAQRVGIELLGLSGLQHARHGEAGFLMGF FT AAYTPLEIEGAVKKLAKALRAAAKS" FT CDS 32989..34272 FT /codon_start=1 FT /transl_table=11 FT /gene="BenE" FT /locus_tag="RPA2798" FT /product="probable Benzoate membrane transport protein" FT /function="InterPro IPR004711 COGs COG3135" FT /db_xref="GOA:Q6N620" FT /db_xref="InterPro:IPR004711" FT /db_xref="UniProtKB/TrEMBL:Q6N620" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28240.1" FT /translation="MSMHPFLASPQQKIVSRMSPRPPPSPVCLGDLTHPIIAGLISVIV FT NYGGTFILVFQAAKIAGLSPELTASWVWSISIGVGLTGLFLSLRYREPIITAWSTPAAA FT FLVTALATTPYAEAIGAYMISAAAFVVLGLSGYFEKVIRLIPPGIASGLLAGILLQFGI FT GAFGGASVDPWLVGLLIAAYVALKRFSARYAVVGILLLGLAFLLTQGRVDLSGLKLVFA FT APVFSMPEFSLNALLSVALPLFLITLTGQYMPGMLVLRNDGFKTSANPIVTVTGLGSLI FT MAPFGSHAFNIAAITAAIATGREAHEDPSKRWIAGIAAGCFYVLVGVFGVTLAAVFMAF FT PATFITTLAGLALLGTIGGSLAGAMADPTSREAALITFLASAANIKLLGIGGAFWGLLI FT GGLAYVVLNGPMPYRATTDHRVTEAAAK" FT misc_feature order(33094..33162,33190..33249,33268..33327,33340..33399, FT 33433..33501,33559..33618,33679..33747,33805..33873, FT 33934..34002,34012..34080,34141..34209) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 34269..35135 FT /codon_start=1 FT /transl_table=11 FT /gene="pdxK" FT /locus_tag="RPA2799" FT /product="putative pyridoxamine kinase" FT /function="InterPro IPR002173:IPR004625 COGs COG2240" FT /EC_number="2.7.1.35" FT /note="Citation: Yang et al. (1996) FEMS Microbiol. Lett. FT 141:89-95" FT /db_xref="GOA:Q6N619" FT /db_xref="InterPro:IPR004625" FT /db_xref="InterPro:IPR013749" FT /db_xref="UniProtKB/TrEMBL:Q6N619" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28241.1" FT /translation="MNHETAPMTTSIISIQSQVVHGHVGNSAAVLPMQAHGLNVAAVPT FT TLLSNHPGLGSTRGRVLDAELVGELLRGIEERGLIETSRYIVSGYLGSRANGEVVAAFV FT KRARQLNPAITYICDPVMGDSHVGVFVPDPVAACICNELVPLADLLTPNHFEAGLIAGH FT PLATWPELEAAVDKMQAWRGARVVVTSCRQADTPDDSLENIVFEGGTSTRLPSPRLELA FT AAGTGDLYTGLLTAGLARNLPLVDAARRAAAIVLDVLKRTMAAGEREMQLASVIDALNP FT ALGQPTR" FT CDS complement(35186..35995) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2800" FT /product="unknown protein" FT /db_xref="UniProtKB/TrEMBL:Q6N618" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28242.1" FT /translation="MMRDFRDAKAMAQTLREAIKPKAELTRSESLELIAKVLGCQNWNV FT LSAAVQSAGEPTRSSGREEVRLDAAILDRYVGFYELANQGVMTISRENGRLVSRLSGQP FT GVPLFAESSTRFFAKVVDAQISFVTDSSGEAQSLVLHQNGLVIPMPRIDADEARRIEQR FT LAEKLTSHRPSAGTEDALRRLIDGIRSGQPCYDEMTEALANATRQQLAKLHEEIGEAGA FT ARSVEFVGVGNGGVDVYLVQHERRPLYWRIGLDGRGAISTAWVAPGL" FT CDS complement(36239..36736) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2801" FT /product="Collagen triple helix repeat" FT /function="InterPro IPR000087" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR008160" FT /db_xref="UniProtKB/TrEMBL:Q6N617" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28243.1" FT /translation="MARRSILVGAAILAMTSGAASALEIDRLAIESGKLVITGKTTKAG FT QEVEVVGTGDKAKSSSSRRFKFSLSDVPETCKLDLKSGTETLTGLLVANCGPRGPKGEA FT GAAGAPGPAGPAGPAGPAGPAGPKGDAGPAGPAGPAGPAGPSGATGPAGPKGEAGEAAP FT KN" FT sig_peptide complement(36668..36736) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.971 atresidue 23" FT CDS 36983..39046 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2802" FT /product="ATP-dependent DNA helicase" FT /function="InterPro IPR000212:IPR001687 COGs COG0210" FT /EC_number="3.6.1.-" FT /db_xref="GOA:Q6N616" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="UniProtKB/TrEMBL:Q6N616" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28244.1" FT /translation="MSLPAPILDGLNPEQRCAVEHGAGPAPCPPLLVIAGAGSGKTNTL FT AHRVAHLVVGGADPYRILLMTFSRRAAAEMTRRVERIARKVLGDRASALSGGLHWAGTF FT HGIGARLLRDYAERIGLDPGFTIHDREDSADLMNLVRHDLGFSKADSRFPAKATCLSIY FT SRCVNAGQPLDVVLGANYPWCAGWAAELKQLFAAYVEAKQRHNVLDYDDLLLYWAQVME FT EPAFAEEIGSRFDHVLVDEYQDTNALQARVLLALKPNGVGLTVVGDDAQAIYSFRAATV FT RNILDFPKAFDPPARVVTLDRNYRSTQAILSAANGVIDLARERFTKNLWTDRADGARPL FT LVSVRDETDQARYIVERVLDAREGGVTLKQQAVLFRTSSHSAPLELELTRRNIPFVKFG FT GLKFLDAAHVKDMLALLRFVQNPRDRVAGFRVMLLMQGVGPASAQKALDTMTAAADPLG FT ALTALPAPPRAGADWRGFVAAVQELRSGDAGWPAEIERALIWYAPHLDRIHEDAETRKA FT DLVQLAQIASGYPSRERFLTELTLDPPDATSDQAGVPTLDDDYLILSTIHSAKGQEWKQ FT VFVLNVVDGCMPSDLGTGTSAEIEEERRLLYVAMTRAKDDLHLVVPQRFFTHGQNAQGD FT RHVYAARTRFIPERLLPLFERTSWPRVTPEAAAAAQRGPRIDINSRMRRMWT" FT CDS complement(39053..39376) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2803" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/TrEMBL:Q6N615" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28245.1" FT /translation="MITTVVQFHMATPISLEEAKKRFESSAPKYQKLPGLIRKYYIRSE FT DGTTAGGIYLWESREAAESVYGGEWRARVAALYGAEPVMSWFDSPVIVDNADGGTITTS FT AAA" FT CDS complement(39449..40186) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2804" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR016934" FT /db_xref="UniProtKB/TrEMBL:Q6N614" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28246.1" FT /translation="MLPLARALTVLLLAVLGLALLLSGEAWAANGAYAVDATDISELGS FT CKLESWWSRATNTDFSAVANPSCVVDLGRPFELTLQANRARADGDWSTTLSPKLKTVLV FT PTAIGQFGLAIEAGGSYDAASGNNTVAFVTLPATYRLSETMRVNLNAGWLWDRAVDQHY FT LSYGVGFDWKFTDTLQLTLEGFGLSGAPDDSAGKIRPRAQAGVRWRPNEIFSMDLIVGH FT NITGESARWITLGTTVRFPEAFK" FT misc_feature complement(40100..40165) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(40100..40186) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.968 atresidue 29" FT CDS 40250..40891 FT /codon_start=1 FT /transl_table=11 FT /gene="nthA" FT /locus_tag="RPA2805" FT /product="nitrile hydratase alpha subunit" FT /function="InterPro IPR004232" FT /EC_number="4.2.1.84" FT /note="Citation: Payne et al. (1997) Biochemistry FT 36:5447-5454" FT /db_xref="GOA:Q6N613" FT /db_xref="HSSP:1AHJ" FT /db_xref="InterPro:IPR004232" FT /db_xref="InterPro:IPR018141" FT /db_xref="UniProtKB/TrEMBL:Q6N613" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28247.1" FT /translation="MADHEHHHHHHHDHDHSELSETELRVRALETILTEKGYVDPAALD FT ELIETYETKVGPRNGAQVVAKAWSDPAYRERLLHDATAAIAELGYTGRQGEHIVAVENT FT PATHNMVVCTLCSCYPWPVLGLPPVWYKSAPYRSRVVKEPRAVLAEFGVTLPQDTAIRV FT WDSTAEIRYLVLPMRPEGSDDFSEGQLADLVTRDSMIGTGLARTPAEIPA" FT CDS 40888..41544 FT /codon_start=1 FT /transl_table=11 FT /gene="nthB" FT /locus_tag="RPA2806" FT /product="putative nitrile hydratase beta subunit" FT /function="InterPro IPR003168" FT /note="Citation: Payne et al. (1997) Biochemistry FT 36:5447-5454" FT /db_xref="GOA:Q6N612" FT /db_xref="HSSP:1AHJ" FT /db_xref="InterPro:IPR003168" FT /db_xref="InterPro:IPR008990" FT /db_xref="UniProtKB/TrEMBL:Q6N612" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28248.1" FT /translation="MNGAHDMGGMDGFGPIVIEPHEPLFHAAWERRAFALTLAMGRPGG FT WNIDMSRFARENRAPIDYLSKSYYQLWLAGLEVLMAERGLVTADEIAAGRPLHPRRDVQ FT VLTAADVTPMLARGAPTERDAAAPARFGVGDHVRAKDLHPRTHIRLPRYVRGRIGTIEL FT VHGAHVFPDSHAHGGGEQPQWLYTVAFEARELWGDDADPTSRVSVDAWDSYLERA" FT CDS 41544..41966 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2807" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6N611" FT /db_xref="InterPro:IPR008990" FT /db_xref="UniProtKB/TrEMBL:Q6N611" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28249.1" FT /translation="MSSQSEAAAIAAHSVPGLPRDDDGPVFREPWEAHAFAMAVTLHGR FT GLFTWPEWAAALSAEIRRAQADGDPDCGDTYYRHWLATLEQMVATKGVASLATQHRYRD FT AWDRAADRTPHGRPIELQPGDFPQSEAFSAAESPPR" FT CDS 42090..43223 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2808" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6N610" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28250.1" FT /translation="MAQIDFDRPMRWTANAAGRYLAEATCDSELFLQRAAALGPSAAIT FT PFQSPDWLSTWLKLLGPSVAAEPLLITVRDSFRDEIAMLLPLVVRRVCGVALVEFADLS FT VSDYNVPLLGPAAPSTPEAAAAAFEAALAAMPDVDVVRLCNLPLTAGGKVNPLALLAST FT PSSTVRNVTTLPRSWDDYLESRPRKFRKALRQHHRALDALGGVRVRMMTSPGDDTAHLF FT GKLDQFQRARIAALGKRYLLDRPAYARFYREVFSRGQAMLSVMESGDSVVAVAYSLLHR FT QSCTTVRLAHAGAEWNRGSPGIVLASEIIRWLIDSGIEQFDLGAGGYDYKKQLGCEPQP FT LMVLEKALTLKGRMALSAWSTYTGGRSLVQSLTAKAS" FT CDS complement(43196..44488) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2809" FT /product="Beta-lactamase" FT /function="InterPro IPR001466 COGs COG1680" FT /db_xref="InterPro:IPR001466" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6N609" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28251.1" FT /translation="MPPPFVSISRRQVLQAIGATLTVPAVRAATAAPASVAATPKPEKL FT ARLSAFFEHEIAAGKLPGAVVLIQQHGRPVYLQCFGWRTAARQHRMTPDTIFALHSMTK FT PITSVAAMMLIDERRLGLQDPLSKYIPSFARVKVGIETVEDGKPALKLVAPDRPVTIED FT LLRHTSGITYEYIGGELIMAAYQQANLFAGRFDNAEFAERIARLPLARQPGRLWRYGHS FT TDVLGRVIEIVSGEPLYDFLKHRLFDPLGMTSTSFVLRTEAEQERMAAVFPTDTVLADA FT ERQRRAHPEWQSGGGGLLSTVTDYARFAQMLLEGGVLDGRRYLSAAAFKAMTTDQIGPG FT SGVERDYFYFPGDGFGYGYGLAVRVEPGEATPPAPGSIGELKWDSGSGTYFGVDPSLDM FT IYVLMQQTETERGRVVPMFKKLVYDAFAVSD" FT sig_peptide complement(44393..44488) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.976) with cleavage site probability FT 0.511 atresidue 32" FT CDS complement(44570..45283) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2810" FT /product="possible exsB protein" FT /function="InterPro IPR004479 COGs COG0603" FT /db_xref="GOA:Q6N608" FT /db_xref="InterPro:IPR004479" FT /db_xref="InterPro:IPR018317" FT /db_xref="UniProtKB/Swiss-Prot:Q6N608" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28252.1" FT /translation="MTDHSSDKTALVLFSGGQDSATCLAWALARFARVETIGFDYGQRH FT LIELECRARLLDGFRAISDDWAAKLGDNHTLTIPTLAEISDTALTRDVAIAMGADGLPN FT TFVPGRNLIFLNFAAALAYRRGITDIVGGMCETDYSGYPDCRNDTIQALQTALSLGMAR FT DITLHTPLMWRDKAATWQLAQDLGGDALVDLIREDSHTCYLGERGARHDWGYGCGECPA FT CRLRAKGWIEYASGI" FT CDS 45400..46224 FT /codon_start=1 FT /transl_table=11 FT /gene="mazG" FT /locus_tag="RPA2811" FT /product="possible mazG" FT /function="InterPro IPR004518 COGs COG1694" FT /db_xref="InterPro:IPR004518" FT /db_xref="InterPro:IPR011551" FT /db_xref="UniProtKB/TrEMBL:Q6N607" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28253.1" FT /translation="MTPSRDIARLIEIMAALRTPVTGCPWDLEQDFATIAPYTIEEAFE FT VAEAISRHDLDDLREELGDLLLQVVFHARIAEERGAFAFGDVVEAITRKMIRRHPHVFA FT DADGNLTPSHVEGVWDRIKAEEKAERAARRGLTEQPSSSVLAGVKSGQPALSRAMDLQR FT KAAKVGFDWNDPRAVLAKIREETDEIEAALDRGDQAHITEETGDLLFALVNLARHAKAD FT PEIALRGANAKFERRFAYIEQALAAQGRTPDDATLAEMDALWNEAKTTEATK" FT CDS 46303..47598 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2812" FT /product="probable HlyC/CorC family of transporters with 2 FT CBS domains" FT /function="InterPro IPR000644:IPR002550:IPR005170 COGs FT COG1253" FT /db_xref="GOA:Q6N606" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR002550" FT /db_xref="InterPro:IPR005170" FT /db_xref="UniProtKB/TrEMBL:Q6N606" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28254.1" FT /translation="MLSVELAIVVALIVVNGLLSMSELAIVSSRPARLSILAQRGVRGA FT RQAMKLSEDPGRFLSTVQIGITLVGVLSGAFSGATLGQRLSDWLTASGVPFADIIGFGL FT VVTLITYATLIVGELVPKQLALRDPEAVAVKVAPAMALLAKISLPVVVVLDISGKAMLA FT LLGQSGEPEDKISEEEIHSLVMEAETAGILEPGERQMIAGVMRLGDRPVGAVMTPRPEV FT DMIDLSDPPDQIRATFASSPHSRLPATDGDRDDPIGIIQSKDVLEVYLRGETPDFRALV FT RDAPVIPASADARDALIMLRNASVHMGLVYDEFGGFEGVVSTADILESIVGAFSSEDGP FT PEPAAVRRDDGSYLVAGWMPVDEFGDLLGMPVPAPRDYHTVAGLVLSHLGALPSVGDKF FT DFQGWRFEIMDLDHRRIDKILASRLPDDEASP" FT misc_feature order(46312..46380,46477..46545,46588..46656,46693..46761) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 47595..47957 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2813" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N605" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28255.1" FT /translation="MTERPLRARRDAHALAAVRLLHTAIWAFFASSILAIPVTIWAGQL FT VAALWLSVFVWGEVVVLVLNRMRCPLTTLAARYTDDRADNFDICLPRWLARHNQRLFGT FT LFALTQLQLGWTLLAR" FT misc_feature order(47652..47720,47730..47789) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT terminator complement(47981..48014) FT /note="TransTerm prediction, 98+%" FT CDS complement(48072..48575) FT /codon_start=1 FT /transl_table=11 FT /gene="ssb" FT /locus_tag="RPA2814" FT /product="single-strand DNA-binding protein" FT /function="InterPro IPR000424 COGs COG0629" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N604" FT /db_xref="HSSP:1KAW" FT /db_xref="InterPro:IPR000424" FT /db_xref="InterPro:IPR011344" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:Q6N604" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28256.1" FT /translation="MAGSVNKVILVGNLGADPEIKRTQDGRPIANLRIATSESWRDRAT FT GERKEKTEWHRVVIFNEGLCKVAEQYLRKGAKVYIEGQLQTRKWTDQSGAERYSTEVVL FT QNFNSNLTMLDGRSGGGGGGGYGDDNSGGDFGSSGPSGGGGARRPMPASSGGGRSDMDD FT DIPF" FT CDS 49004..49870 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2815" FT /product="possible outer membrane protein" FT /function="InterPro IPR000498" FT /db_xref="GOA:Q6N603" FT /db_xref="InterPro:IPR011250" FT /db_xref="UniProtKB/TrEMBL:Q6N603" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28257.1" FT /translation="MVVTWNYRGALARLGPRRGHTADREPEEHRQPGEIAMKKFLLGTV FT GLIALGAAPAMAADLAARPYTKAPPIIAAAYDWSGFYVGANGGWGTSRNCWDYLGTTAT FT PAVALGEGCHDASGGTAGGQVGYNWQISTWVFGVEAQGNWADFKGSNANLLVIPAPTTN FT QTKIDAFGLFTARVGYAWNNALIYVKGGAAVTSDKYTRFRTATGVFNDDASETRWGATV FT GTGLEYGFTPSWSFAVEYDHLFLGGRDLTFSPVLPNVSNVSHIKQDVDVVTARINYRWG FT GPIVARY" FT misc_feature 49121..49189 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 50177..53194 FT /codon_start=1 FT /transl_table=11 FT /gene="uvrA" FT /locus_tag="RPA2816" FT /product="excinuclease ABC subunit A" FT /function="InterPro IPR000345:IPR001687:IPR003439:IPR004602 FT COGs COG0178" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N602" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR004602" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6N602" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28258.1" FT /translation="MDEVIKAKRQTPAASSRTAITIRGAREHNLKNVDVTIPRDKLVVF FT TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQK FT TTSKNPRSTVGTVTEIYDYMRLLWARVGVPYSPATGLPIESQTVSQMVDRVLALPEGTR FT LYLLAPVVRGRKGEYRKELADWLKKGFQRVKIDGAFHELAEAPTLDKKFPHDIDVVVDR FT IVVRPDIGQRLAESFETALKLAEGLAVIEYADAPAAPPTAEPGQDEPADKKKKADKKVA FT KIHDKSGAERILFSEKFACPVSGFTIPEIEPRLFSFNNPYGACPECGGLGIEQHIDADL FT VVPDKELTLRKGAIAPWAKSSSPYYLQTLTALGKHYKFTLDTKWKDLPKKVQNVLLHGS FT GDDEIKFSYEDGVRSYDTKKPFEGVVTNIERRFRETESEWAREELGKYFSDVPCDACHG FT HRLKPEALCVKVGGKHIGEVSELSVKAAGDWFAKVPEVLNKQQNEIAVRILKEIRDRLS FT FLLDVGLNYLTLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARL FT LDTLKRLRDLGNTVIVVEHDEDAILLADHVLDIGPGAGVHGGHIIAQGTPAEIMRNPKS FT LTGKYLTGELSVPVPERRPPNHRRTLKLVNARGNNLKNVTAEIPLGLFTCVTGVSGGGK FT STLLIDTFYKAIARKLNNASEPPAPYDRIEGLEHIDKIIDIDQSPIGRTPRSNPATYTG FT AFTPIREWFAGLPESKARGYEPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDV FT CKGKRYNRETLDVLFKGKSIADVLDMTIEEAAEFFKAVPRVRETFKTLQRVGLDYIHVG FT QQATTLSGGEAQRVKLAKELSKRATGRTLYILDEPTTGLHFHDVAKLLEVLHELVAQGN FT TVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAWGPPEDIVKAPRSYTGKFLKPVLEK FT KGPAKALKRKADEAAE" FT CDS complement(53251..54036) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2817" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N601" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28259.1" FT /translation="MDDAMVSAVTCGAVMAFDRNIWIEKFLENSVPSFPCPHCSRGVLG FT FDGKSFWKEEPKHSKDAHAHDDWDPTWIEERFVMFLRCGVAKCGEVVAVSGNIEVEEVV FT DEDEGYDFASVLYPTSLVPAPPIIQMTDGTPDEVAGELSLAFQLFWADLGASATKIRTS FT VERLMDHFKVARYSRTKGKLKPIPLYNRIEAFIKANGKVVHQDHLHALRVVGNLGTHKN FT SLTRSDILEAFQVYEHALDELIGKKSASIAKLARKLKKK" FT CDS 54381..54755 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2818" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N600" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28260.1" FT /translation="MSRLTSLTLAVALALLPVAASAASHKKHAKRAQGYGFLPGYVQPP FT NNAVPLYMQKLSPAQRALLRPKRPWYIDPTPDYYRWNGPWSGEWRYPGRAGFYRGRYNG FT GSFGPCWTQTPIGPIWNCGK" FT sig_peptide 54381..54449 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.914 atresidue 23" FT misc_feature 54390..54449 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(54773..55135) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2819" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28261.1" FT /translation="MRWLADECVSASLVAALRADGHDVLYVAEMAAGMRDADVVTMAAT FT DGRLLQTEDKDFGELTVRFGRAVPGLVLLRIDPTNAKLQAVRLREAITRHGADLFGRYV FT VVEEARMRGRLLRPAS" FT CDS complement(55138..55476) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2820" FT /product="DUF433" FT /function="COGs COG2442" FT /db_xref="InterPro:IPR007367" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28262.1" FT /translation="MGVNGAAGRSPGPKAVKPASVAIAVDYAMLTHEQAAVCAMRHERI FT DINPEVMGGKPVVRGTRIPVEMILRKLGAGLSTAEIIADHPRLTADDILAVQTFAADYL FT ADQDVIFG" FT CDS 55512..56288 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2821" FT /product="possible ion transporter" FT /function="InterPro IPR001622:IPR005820:IPR005821 COGs FT COG1226" FT /db_xref="GOA:Q6N5Z7" FT /db_xref="InterPro:IPR003938" FT /db_xref="InterPro:IPR013099" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28263.1" FT /translation="MTLHDVRLAVRRLYDGATPRGVAFRYGLLAFDVVTIVFIVGTSFL FT PPNPVVEALDTGFGVLIMIDFLARLYASRGPMREFGRLATWTDLVAIGSFLAPLPGEGA FT GFLRILRTLRAFQDYQMLTRLRSDSAFFRHHEEVVIAVARLAVFIFVMTAIVFETQRFS FT NPQIANYADALYFTVTALTTTGFGDITLPGTLGRMISVVIMIFGVTLFFNLARALISPN FT KVRFPCPTCGLQRHDIDAVHCKACGTVLNIPDEGRD" FT misc_feature order(55572..55640,55668..55727,55923..55982,56088..56156) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 56326..56880 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2822" FT /product="conserved unknown protein" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z6" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28264.1" FT /translation="MLIRRSAFASLAYLAAAVALPAAALAQAPAQPSPAAPAKPAAADP FT AALLTRLYKAAAKDNAGGAFVNNAKERGKYLSKLLAALWTKAEAKVPQGEIGPIDFDPV FT SNSQDPDIKSFVIKAESQDDARATLAVALIGSQPRKVAADSVIRYALVRDGTSWRIDDI FT RGSVDGQTWSVRQMLEASLKN" FT sig_peptide 56326..56406 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.858 atresidue 27" FT misc_feature 56344..56412 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 57160..57450 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2823" FT /product="conserved hypothetical protein" FT /function="COGs COG2388" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28265.1" FT /translation="MSGTTAAANVRDNKALNRFELDAHGEIAFANYRRTGGRVVITHTE FT TPPPLRGRGIASRLVRGALDLIRAEGAKVSAGCGFVADFLDAHPEYADLTA" FT CDS 57583..57990 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2824" FT /product="Thioesterase superfamily" FT /function="InterPro IPR006683" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28266.1" FT /translation="MTVSPPPGFQPFAVQDGYIGTNGPYYWRQSGDGQPEFGFLSDDRH FT GNPNGVLHGGALLGFLDTILGFSVVLAGQRRCATVSLDSRFIATIEPGGWITGRTTMKK FT LSRSLAFIDAEALAGDKLLVTTSAVFRIFES" FT misc_feature 57730..57798 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(58290..58682) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2825" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="PDB:2GQB" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28267.1" FT /translation="MSIFGKIMSAIFGDSAAASPGGAQAPATTGAAGTAPTAPQPTAAP FT SIDVAPILDKAVKAKGEKLEWRTSIVDLMKALDIDSSLSARKELAKELGYSGDMNDSAS FT MNIWLHKQVMSKLVANGGKLPPEIKH" FT sig_peptide complement(58605..58682) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.928) with cleavage site probability FT 0.706 atresidue 26" FT CDS 59064..59960 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2826" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR018692" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28268.1" FT /translation="MATTYSSAPPAIAADDPAPVVHRIGLADLGAALQQGWDDFKAVPS FT HAVMLVLIYPVLGLVLARLVHGYAVLPLLFPLAAGFALLGPFAALGLYELSRRRELGQP FT ASASDALAVLRSPSLGAMLGLGAILLALFLVWIAAAQAIYVSLFGYAPAAAIPDFVRRV FT LTTPEGWSLMLIGCGVGFLFALAALCLSVVAFPMMLDRHAGIGDAMATSLRVVAVNPLP FT IAAWGAIVAGLLVIGSIPAFLGLAVVVPLLGHATWHLYRKVVEPNPNPPQIPPTRALKR FT SAADFPANLFQWKRNGT" FT misc_feature order(59190..59249,59268..59336,59394..59462,59466..59534, FT 59577..59645,59706..59774,59784..59843) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT terminator 59988..60020 FT /note="TransTerm prediction, 98+%" FT terminator 60642..60667 FT /note="TransTerm prediction, 98+%" FT CDS 60748..62184 FT /codon_start=1 FT /transl_table=11 FT /gene="gid" FT /locus_tag="RPA2827" FT /product="putative glucose-inhibited division protein FT (gid)" FT /function="InterPro IPR000205:IPR002218:IPR004417 COGs FT COG1206" FT /db_xref="GOA:Q6N5Z1" FT /db_xref="InterPro:IPR002218" FT /db_xref="InterPro:IPR004417" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020595" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5Z1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28269.1" FT /translation="MTSRTAPASPVVHVIGAGLAGSEAAWQIARAGVRVVLHEMRPVRT FT TEAHKTDGLAELVCSNSFRSDDAANNAVGLLHAEMRRLGSLIMQAADANQVPAGGALAV FT DRDGFSAAVTKALAEHPLIEICREEIDGLPPQEWTNVVIATGPLTSAPLADAIRGLTDE FT SALAFFDAIAPIVHRDSIDMSVAWFQSRYDKVGPGGTGADYLNCPMTREQYDAFVDALI FT EGEKVDFKDWEKDTPYFDGCLPIEVMAERGRETLRHGPMKPVGLTNPHNPTVKPYAIVQ FT LRQDNKLGTLYNMVGFQTKLKHGAQLRVFRTIPGLENAEFARLGGLHRNTFLNSPKLLD FT ESLRLRASPRLRFAGQMTGCEGYVESASIGLFAGLAAAADLVGQSLAPPPPTTALGALL FT GHITGGHIETIDAGPRSFQPMNINFGLFPPLANPPTKGPDGKRLRGPEKSVAKKQALSA FT RALADIDAWIAAHLKLPKAA" FT CDS complement(62214..63086) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2828" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6N5Z0" FT /db_xref="InterPro:IPR002060" FT /db_xref="InterPro:IPR008949" FT /db_xref="UniProtKB/TrEMBL:Q6N5Z0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28270.1" FT /translation="MSDSAASTSAAAFCAGLVREADFDRYAATLFAPPEKRRPLLALAA FT FNAEIVRVRSQVSQPLPGEVRLQWWTDLLAGTAHGGAEGNPVAAELTRAIAEHGLPVEP FT LTRLIEAHIFDLYNDPMPDWTVLEPHLAETEGALISLTARVLAQGAAQASDAVEHVARH FT AGVVVGVARIVARLPYDSARRQLYLPNDVVQRHGCDLEQVFSGQSTAALRAALAEVVAE FT ARKHLDKALQEIADLPAAVRPAFLSLALACRDLDRLAAPERDPFTPFERSRLATLWTLW FT RASRSKPFR" FT sig_peptide complement(63024..63086) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.813) with cleavage site probability FT 0.728 atresidue 21" FT CDS complement(63083..63466) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2829" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007523" FT /db_xref="PDB:2FVT" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28271.1" FT /translation="MAQRSEIPHFPRTAAIDAYGKGGFYFADMSHQGSLLFLPDAVWGW FT DVTKPEQIDRYSLQRVFDNANAIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTGP FT AIRTYNIMIGERRRVAAALIAVP" FT CDS complement(63628..64746) FT /codon_start=1 FT /transl_table=11 FT /gene="secF" FT /locus_tag="RPA2830" FT /product="putative protein-export membrane protein secF" FT /function="InterPro IPR003335:IPR005665 COGs COG0341" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Y8" FT /db_xref="InterPro:IPR003335" FT /db_xref="InterPro:IPR005665" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28272.1" FT /translation="MTHWILVGLGVLIVVLTVVSIFGWLPSLRIVPDNTHFDFTRFRRI FT SFPISAVLSIAAITLFFTHGLNFGIDFRGGTLLEVRAHSGAADIAGMRDTLSKLSLGDV FT QLQQFGGPAEVLIRIAEQPGGDQAQQVAVQKVRAALGDSVDYRRVEVVGPRVSSELLAF FT GMLGLMVAILGILVYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALL FT TILGYSLNDTVVIYDRIREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALL FT LFGGHAIHSFTAVMMFGVVLVGTYTSIFIAAPILIYLGVGTHRLDEPAEKPAKPEPVTP FT PAAAEEIPAQFVEPEPAAPASKPAKAGKPKKR" FT misc_feature complement(order(63784..63849,63880..63945,64039..64104, FT 64120..64185,64207..64263,64543..64608,64669..64734)) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(64772..66373) FT /codon_start=1 FT /transl_table=11 FT /gene="secD" FT /locus_tag="RPA2831" FT /product="protein-export membrane protein secD" FT /function="InterPro IPR003335:IPR005791 COGs COG0342" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Y7" FT /db_xref="InterPro:IPR001036" FT /db_xref="InterPro:IPR003335" FT /db_xref="InterPro:IPR005791" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28273.1" FT /translation="MLYISRWKALAIILTALAVCLCAVPNFFPESTVKSWPKWAQRHLV FT LGLDLQGGSHILLEVDANSVKKDKLDSVRDDARRVLREARIAYTGLATKGDSVEVRISK FT DTDVPVALAKLRELSQPLGGLLGSNGQRSLEVSDAGGGLIRLTVPQAAIADRVRQSVDQ FT SIQIVERRVNELGTVEPLIQRQGADRILVQVPGLQDPTRLKELLGKTAKLDFRMVDSSV FT SGDQAMGGNVPPDSELLMSASSPKQPYVIKKQVLVSGADLTDAQPGFDQRTGEPIVSFR FT FNTNGARKFARATTENVGLPFAIVLDNEVISAPVIREPITGGSGQISGSFTVQGANDLA FT ILLRAGALPAPLTIIEERTVGPGLGQDSIEKGERAAYVGSILVIVFMLLTYRLFGVFAN FT LAVAVNVAMIFGVLSLLNATLTLPGIAGIVLTVGIAVDSNVLIYERIREEIRAGRNAIS FT AIDAGFKRALATILDSNITTFIAAAVLFYIGTGPVRGFAVTLGIGIITTVFTAFTLTRL FT IVATWVRWKRPHHVPI" FT misc_feature complement(order(64814..64879,64895..64960,65048..65113, FT 65129..65194,65201..65251,66287..66352)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(66302..66373) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.964) with cleavage site probability FT 0.619 atresidue 24" FT CDS complement(66418..66855) FT /codon_start=1 FT /transl_table=11 FT /gene="yajC" FT /locus_tag="RPA2832" FT /product="putative membrane protein, possible preprotein FT translocase" FT /function="InterPro IPR003849 COGs COG1862" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR003849" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28274.1" FT /translation="MFVTPAYAQAAAAGGDANSMIMSLLPFALIFVIMYFLILRPQQKK FT VKEHAEMVKNIRRGDTIITSGGLVGKVTKVIDDDTVEFELADGIRARQMRQMITGVRAK FT GEPVKDAPEANGKAKGKKDKDAPAKTEGDKTEPAKDDTASS" FT misc_feature complement(66739..66795) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 67019..68035 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2833" FT /product="possible ATPase family protein" FT /function="InterPro IPR001687 COGs COG2607" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR008533" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28275.1" FT /translation="MAAASGSASMAKKTKSRPAKAAPKSAARKPARAPAAKRRPPATPP FT GASLEGALLERIAHALEGISAHLAGTSGAPADAALNSADAFIWQPEGRLAPVPKVSRVD FT LSLLQGVDRMRDTLIENTERFATGLPANNALLWGARGMGKSSLVKAAHAHVNARPDVAG FT RLKLIEIHREDIESLPALMTLLRASDLRFIVFCDDLSFDGNDASYKSLKAVLEGGIEGR FT PDNVILYATSNRRHLLPRDMMENERSTAINPGEAVEEKVSLSDRFGLWLGFHKCSQDEF FT LAMVRGYCAHYDIAIDDEQLEREALEWSTTRGSRSGRVAWQFVQDLAGRLKVRLGTR" FT CDS 68204..69904 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2834" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6N5Y4" FT /db_xref="InterPro:IPR011250" FT /db_xref="InterPro:IPR020080" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28276.1" FT /translation="MRTSIICVSAVLAVSCGAAEAADLSRAPATKAITAWNWTGFYLGG FT HLGAGFGTAKVDNPFGPSIYGDTVRAPKALAGLQAGYNWQAHGSPWVLGVEVDASAIDA FT DGTNTCLAYSGQFVSANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGGGAFLFGNFRM FT TTNAPDYLNQPSAELDTTRWGWTVGAGIEHALSSRWAVRAEYDYANFGHRGIDGPGGGF FT LQTPFNPRTLVDTAGAPTQVHQDMHLIKLGLNYYFGRGDGAFDSVARLPVKAPAGTSWS FT AWQFDVGARYWYSHGRYQNDLTLNTINAQQEHLVSRLTYESEGHSGEVFWRIDSPQKLF FT LKGFAGGGGLVAGKMNDEDWFPTDPQNATAYSNTDHNKVTGTIAYATLDVGIDLFGDAF FT GKLGVFAGYNFYRDRKDAFNCRQIALAIPTAFCGSSEGISISQYEDWHSLRIGANGTLA FT VAPNTKLLIDAAYLPYTHISALDIHHARTDVASKDSSAWGTGRGVQIEAILTYDITPTF FT NVGVGGRYWAMWATDVETAGFGSPVPTQLLPIRVERYGTFVQASYKFDR" FT sig_peptide 68204..68269 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.995 atresidue 22" FT CDS complement(69951..70751) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2835" FT /product="conserved hypothetical protein" FT /function="COGs COG2020" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28277.1" FT /translation="MIKRLLIPTYGLLSYAVFLVSMIYAPGFFGNTLVSKSIDVGAASS FT PGQAFLINLQLIGLFAIQHSIMARQRFKQWWARHLPAPCQRSTYVLLTSLLLLLLFWQW FT RPIPVVVWSTSGIAAWLLVGLYWMGWVLVLASTHMIDHLDLFGLRQSFSAMRGTEPLRP FT AFRTPLLYRLVRHPLMLGFLIVFWATPEMTAGHLLFAVVITIYILIALQFEERDLIAEF FT GATYQQYRERVPMLLPRVLRRTAAGRGGAVPDESRATASPPSGG" FT misc_feature complement(order(70119..70175,70188..70238,70359..70424, FT 70440..70490,70554..70604,70650..70715)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(70659..70751) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.824) with cleavage site probability FT 0.472 atresidue 31" FT CDS 71586..72479 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2836" FT /product="possible hydrolase" FT /function="InterPro IPR000073 COGs COG0596" FT /db_xref="GOA:Q6N5Y2" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28278.1" FT /translation="MQEAAMPTVLAIPVTRYAEGDSIHLAYQTFGSGEFDILVMPGFVS FT HVERVWEHPSCRAFLVSMMALGRLIIFDRRGVGLSDRVGSAPNVDVTAEDIGTVLRAAK FT SRRVVLFGASECGPACIKFAVDHPRLVAGLILFGSLAKGCRTPNYPYALTVEQFEIWRR FT QLIGAWGSAAGIETFGPSLAHDAKSKAWWAGLLRAASSPGGIWAVLAALRDADVLELLP FT KLSVPTLVLHRRGDRAVRIAAGRDMAARIAGAEFVELDGDDHWFFAGDQRPVLDAIRQF FT VSDLRRPGPKRTRPRT" FT terminator 72524..72544 FT /note="TransTerm prediction, 98+%" FT CDS complement(72580..73995) FT /codon_start=1 FT /transl_table=11 FT /gene="lppB" FT /locus_tag="RPA2837" FT /product="Peptidoglycan-binding LysM:Peptidase M23/M37" FT /function="InterPro IPR001687:IPR002482:IPR002886 COGs FT COG0739" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Y1" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR002886" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="InterPro:IPR018392" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28279.1" FT /translation="MSRVAALLCSRRAPQMAVLALMSVGFSACSSDMQTRFQQAPFGPV FT ETTGSVAPQHQRQELPQYARPQYQPQPQYQSQALPPIASPSSYPVANGGGGFSGGGRGV FT GSYEPPPRAPIDQTGTVQAPRSVAAARPMPAAPAAAAPVHAPGTTIIVGTSDTLEILAQ FT RYNVSTAEILRANGYKGPRRLQPGQQLVIPSRATATAQVAAPVAAPMAAPPAPRPVATA FT APAPARVHYVNNGDTLMNIARRNNISLGELARYNNLTTTTKLKPGMKINVPGAQVAGLA FT PAQPPIQAPAAAPMAAPQVRMANVAPTVPAEPPQKARMVAPTETPEAAAPAEAAPVKSA FT EATGALPSFRWPARGRVIAAYGAKTNGKSNDGINLSVPEGTPVKAAEDGVVAYAGSELK FT GYGNLVLIRHSNGYVSAYAHASELMVKRGETIKRGQVIAKSGQSGEVSSPQLHFEIRKG FT STPVDPLKFLNGA" FT sig_peptide complement(73903..73995) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.878) with cleavage site probability FT 0.377 atresidue 31" FT CDS complement(74116..74769) FT /codon_start=1 FT /transl_table=11 FT /gene="pimt2" FT /locus_tag="RPA2838" FT /product="putative D-aspartate protein FT carboxylmethyltransferase type II" FT /function="InterPro IPR000051:IPR000682 COGs COG2518" FT /EC_number="2.1.1.77" FT /db_xref="GOA:Q6N5Y0" FT /db_xref="InterPro:IPR000682" FT /db_xref="UniProtKB/TrEMBL:Q6N5Y0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28280.1" FT /translation="MPSPAAPPPEKMMFQLSLRRRGISDQAVLRTMEAVPRDQFVDPGY FT RDGAWRDTALPIACGQTISQPFVVAFMTEQLELRPRDRVLEIGTGSGYHAAVLSRLAAD FT VLSFERFKTLADRARKRLAELGCRNVEVVFGDGFDLPETAGTFDRILITAAVPELPARL FT LERLDPGGVLIAPVGPPNGRQTLLRVRRTPNGDEHKALGEVRFVPALRGIAREL" FT CDS 74993..75367 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2839" FT /product="response regulator receiver (CheY-like protein)" FT /function="InterPro IPR001789 COGs COG0784" FT /db_xref="GOA:Q6N5X9" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q6N5X9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28281.1" FT /translation="MTTPSPTGGSVFLVEDEAMIRMMVVDMLEELGFSVAAETGEINEA FT LQLAEATEFDIAILDVNVNGKVISPVADLLKARNRPFIFATGYGTQGVPEDYRDRPALQ FT KPFQIESLKQALDATLRGAA" FT CDS complement(75376..75903) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2840" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007344" FT /db_xref="UniProtKB/TrEMBL:Q6N5X8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28282.1" FT /translation="MRIPDRFHIAADHEHARDAAERLFAVVKQQLIAVLPKTSEFLHIG FT ATSVPGCLTKGDLDIVVRVEREDFQVTEAALAARYARNSGSVRTNEFAAFEDSACMPHL FT GIQLTVKGGEFDVFHRFAAALRADPALVRRYNELKRAYDGQPMDRYRAAKDAFVTNALR FT GGSAERGNERAE" FT CDS complement(76116..76883) FT /codon_start=1 FT /transl_table=11 FT /gene="surE" FT /locus_tag="RPA2841" FT /product="survival protein surE" FT /function="InterPro IPR002828 COGs COG0496" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5X7" FT /db_xref="InterPro:IPR002828" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5X7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28283.1" FT /translation="MRILCTNDDGIHAPGLKTVEQIARAISDDVWVVAPELDQSGVSHS FT LSLNDPLRLREVGPRHFAVRGTPTDCVIMGSRFILKDKAPDLVLSGVNRGRNVAEDVVY FT SGTIAGALEGTILGLPSFALSQEFTIETRNAPLWETARTHAPDIIRKVMAAGVPKNTVV FT NINFPACTPDKVKGVVVTRQGKRNPGFLRIDERHDGRGNPYYWIGFERIKVEDMPAEGT FT DLAALAANFVSVTPLKLDRTDETFSAALANTLA" FT CDS complement(join(77025..77942,77942..79267)) FT /pseudo FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2843" FT /product="pseudo gene of Fe+3 siderophore transport FT receptor" FT /function="COGs COG1629" FT /db_xref="PSEUDO:CAE28284.1" FT /inference="non-experimental evidence, no additional FT details recorded" FT sig_peptide complement(77871..77939) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.730) with cleavage site probability FT 0.219 atresidue 23" FT sig_peptide complement(79175..79267) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.994) with cleavage site probability FT 0.874 atresidue 31" FT CDS complement(79515..80186) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2844" FT /product="SCP-like extracellular protein" FT /function="InterPro IPR001283 COGs COG2340" FT /db_xref="InterPro:IPR014044" FT /db_xref="UniProtKB/TrEMBL:Q6N5X6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28285.1" FT /translation="MSFPVIASASKQSTAPCTVLDCFVAALLAMTVILAVITTSSAPAF FT AAGPAEMISDFRAKNGEGKVVMDATLNAIAQRQAVAMASKDVLSHEAGGSFTSRVAPAN FT VSRAAENIAYGYPDFPNTLKQWINSPGHRANLLLKGASKVGVASVRSSASGRTYWAMVI FT AGGDEKPKARQPAKSAKPAATSAKGADKEKPAKPKSVQPKSVQPKSVQRDCSIKMLGLC FT F" FT sig_peptide complement(80046..80186) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.998 atresidue 47" FT misc_feature complement(80076..80141) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(80192..81496) FT /codon_start=1 FT /transl_table=11 FT /gene="serS" FT /locus_tag="RPA2845" FT /product="seryl-tRNA synthetase" FT /function="InterPro IPR002314:IPR002317:IPR006195 COGs FT COG0172" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5X5" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002317" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR010978" FT /db_xref="InterPro:IPR015866" FT /db_xref="InterPro:IPR018156" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5X5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28286.1" FT /translation="MHDIKAIRDNPQAFDAAFTRRGLAPIAGSLMKLDEVRRAAVQAAE FT QAQARRNAASKEIGDAKKAKDNARAEALMAEVTELKTTMPALDAAVKEADEALKKALSE FT IPNLPLPEVPEGADEHGNVEHHRFGEKPSYSFTPKPHYDLGEALGMMDFEAAAKLSGAR FT FTVLKKGLARLERAIGQFFLDVHTGDHGYTEVNPPLLVKDDAMFGTAQLPKFREDQFAA FT GAIGSGGEGYWLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGM FT IRQHQFTKVELVSITTPEQSKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKT FT YDIEVWMPGQGEGGAYREISSCSVCGDFQARRMDARSRGSDGKPRFVHTLNGSGTAVGR FT ALIAVIENYQQEDGSIAVPDVLQPYMGGLKVIAKA" FT CDS complement(81621..81926) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2846" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005546" FT /db_xref="UniProtKB/TrEMBL:Q6N5X4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28287.1" FT /translation="MAVGQAVAEPFGGLALVHLHRDGFVEGGGITALSGAGRNDDAGFS FT TLGSRLTTSFTLSPVWWRCPGWWHPGSTHSVPRRRSRIWRSAAPASGSVAIRCAAS" FT CDS complement(82067..82882) FT /codon_start=1 FT /transl_table=11 FT /gene="tatC" FT /locus_tag="RPA2847" FT /product="putative sec-independent protein translocase FT component TatC" FT /function="InterPro IPR002033 COGs COG0805" FT /db_xref="InterPro:IPR002033" FT /db_xref="InterPro:IPR019820" FT /db_xref="InterPro:IPR019822" FT /db_xref="UniProtKB/TrEMBL:Q6N5X3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28288.1" FT /translation="MSAEDIEASKAPLMDHLIELRSRLIKALLGFGIAFIFCFFFAKQI FT YNVLVWPFVWVAGPENSKFIYTALLEYFLTQLKLAMFGAGFISFPIIATQIYKFVAPGL FT YKHERNAFVPYLIATPGFFLLGSLVVYFLVLPMLVRFSLGMQQMGGAETAQIQLLPKVG FT EYLSLMMSLIFAFGLAFQLPVILTLLGRIGVLTAKQLKEKRRYFIVGAFIIAAVLTPPD FT VISQASLAIPLLLLYEGSIIAVSMVEKKRAAADASASANASTDSSTPAA" FT misc_feature complement(order(82142..82198,82211..82261,82298..82363, FT 82478..82543,82580..82645,82745..82810)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(82879..83388) FT /codon_start=1 FT /transl_table=11 FT /gene="tatB" FT /locus_tag="RPA2848" FT /product="possible sec-independent protein secretion FT pathway component TatB" FT /function="COGs COG1826" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N5X2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28289.1" FT /translation="MVIGVVALIAIGPKELPGVLRTVGQWMGKARRLATEFQGQFQEAM FT REAEMADLKKSFDEVKEATSGLSTNNMLTKLSSEVTDAMALDKATNIDTPPAEPTTPAQ FT PTAETFVEATQHDAAASEPLAIVREAQGTEPPHLPVVAETHALATPDAAPPDLAHPEPT FT KDAKAS" FT CDS complement(83605..83841) FT /codon_start=1 FT /transl_table=11 FT /gene="tatAE" FT /locus_tag="RPA2849" FT /product="putative sec-independent protein translocase FT protein tatA/E" FT /function="InterPro IPR003369:IPR006312 COGs COG1826" FT /db_xref="GOA:Q6N5X1" FT /db_xref="InterPro:IPR003369" FT /db_xref="InterPro:IPR006312" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5X1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28290.1" FT /translation="MGSLSIWHWIVVIAVVLLLFGRGKISDLMGDVAQGIKSFKKGLQD FT DEKTAEKSEPVKSIDHTSTPGATNRTDVGSKAV" FT misc_feature complement(83779..83829) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(83988..85286) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2850" FT /product="conserved unknown protein" FT /function="InterPro IPR005234 COGs COG1386" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5X0" FT /db_xref="InterPro:IPR005234" FT /db_xref="UniProtKB/TrEMBL:Q6N5X0" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28291.1" FT /translation="MASLAEKRIVEFEQPVEHLADDSAEQQPQSRPEELRLLEALLFAS FT PEPLDQAALAKRMPEGVDVKVALKQLQEDYASRGVNLVRIANKWTFRTASDLAWLMTRE FT STETRKLSRAAIEMLAIIAYHQPITRVEIEEIRGVATSKGTLDVLLETGWVKPRGRRKT FT PGRPLTFGTTEAFLSQFSLESLTDLPGLEELKGTGLLDTRLPTGFSVPTPSDDPALRED FT EDPLEPGDLDLSLAPQPELDLEGDAAAADEAGVSATAEATGAAETGEAELGVAEAAAHD FT GAAPEVGFAETSEDDAEEAETGFAETSDDEAEAETGFAETEDADEAGEIEDAVEVGEVG FT DRELEAEEADADDFDIEDDVSIEIETVEVELVASDDQDEDVVAEAHEVASDDVEAGNDE FT TGHTDTPELDTAEPEGSEEDAEHDAHGEDDQHQ" FT CDS complement(85307..86140) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2851" FT /product="DUF173" FT /function="InterPro IPR003768 COGs COG1354" FT /db_xref="GOA:Q6N5W9" FT /db_xref="InterPro:IPR003768" FT /db_xref="UniProtKB/TrEMBL:Q6N5W9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28292.1" FT /translation="MTAEILQFETGRPVEQQADQDEALVIDVEGYEGPLDLLLTLARQQ FT KVDLHKISILALADQYLLFIEEARKIRLELAADYLVMAAWLAFLKSRLLLPEPPAQEGP FT SAEDMANALANRLRRLEAIREAANRLMTRAQLNRDIFPRGQVEEIAEIKHPKFTATLYD FT LLSAYASQRQSRVLTTVHLAKRTVWSLSEARASLERLVGLAEDWSRLDEYLLRYMPDPT FT QRATVLASSFAAALELVREGEVELHQSGPLAPLYFRKRPPSPAMEAAALPDTPVG" FT CDS complement(86137..87162) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2852" FT /product="putative sugar hydrolase" FT /function="InterPro IPR001764 COGs COG1472" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5W8" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q6N5W8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28293.1" FT /translation="MAPRAFITGIAGLSLSDDERGFFRESRPWGFILFKRNVDNPVQVK FT ALVDDLRGTVGSPDAPVLIDQEGGRVQRLGPPHWPVYPPGAVFSTLYDIDPEAGLTAAR FT LSARLIADDLAALGITVDCLPLADVPITGADAVIGDRAYGTSPDKVAAIARAVTDGLAQ FT GGVLPVLKHIPGHGRATADSHHLLPTVETSREELDRTDFAAFRPLADLPMAMTAHVVFS FT ALDAAQPATTSATIIDRVIRDSIGFQGLLMSDDVSMNALAGSIAERTRAIVAAGCDVVL FT HCNGKLDEMRQVVAETPELQGRALTRAEAALAARHAPQPFDRAAARAELDALIGRARVG FT A" FT CDS complement(87211..88833) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2853" FT /product="Proline-rich region" FT /function="InterPro IPR000694 COGs COG0810" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR007730" FT /db_xref="UniProtKB/TrEMBL:Q6N5W7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28294.1" FT /translation="MTDRYQSRPFPLDDDDSRASSRYPQKPENDPLAELARLIGQTDPF FT GQAAPRPEPAPPVAPQTRSTDFRASRPVPPQAEDESSPPPMPSWMQHRQTARAPEPQRT FT QEPTFAPEPDFSRPPSFINAAPPRRAEAPSFERAPAIQPPIDPNPLQMRPLEQPAMDLR FT SLDPRFDPAPPEQRQLDLPPPDRVHYEPPFEPLPATSLEPDRYDEALYGQLPADPAPVG FT GYQESPYGYEDGYDDQADQRALKPRRNTMLTVVGILALAVVGTGGALAYRTFAGTTRTG FT EPPVIKADTSPTKVPGPSNDNAGKPIQDRLASSNGVEALVSREEQPAADPSRMPGSGPR FT VVLPQLNQNPNPPPVASVAPGGKPNLPPPPNNGTLAGDEPRKIKTYSIRPDQADAAAQP FT AGAARAAAPAARTPGRGVADANASAGNAPLSLSPNSAETPAPRPQRVASAPPSEPAATS FT GGYVVQVSSQRNEADAKASYRSLQSKFPSVLGSQPPLIKRVDLGSKGTYYRAMVGPFSS FT AEQAQQVCGNLKSAGGQCVVQRN" FT misc_feature complement(88012..88077) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(88936..90729) FT /codon_start=1 FT /transl_table=11 FT /gene="argS" FT /locus_tag="RPA2854" FT /product="arginyl-tRNA synthetase" FT /function="InterPro IPR001278:IPR001412:IPR005148 COGs FT COG0018" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5W6" FT /db_xref="InterPro:IPR001278" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR005148" FT /db_xref="InterPro:IPR008909" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015945" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5W6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28295.1" FT /translation="MAELPMSTHLFARLLSRVHAVCAALIEEGALPAGIDLSRVVVEPP FT KDASHGDMATNAAMVLAKDAKAKPRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPA FT VWAEALRAVLDAGAGYGRSTVGGGEKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLD FT TAGYDVTREYYINDAGAQVDVLARSAFLRYREALGETIGEIPEGLYPGDYLKPVGEALK FT AEHGAALKDMPEAQWLPTVRATAIAMMMEAIKGDLAALNITHEVFFSERSLIEGGRNRV FT AETIEFLRAKGDVYQGRLPPPKGAPVEDYEDREQTLFRATAYGDDVDRPLLKSDGSYTY FT FASDIAYHKVKFDAGFANMVDVWGADHGGYIKRMQAAIQAVTAGKGALDVKIVQLVRLL FT RNGEPVKMSKRAGDFVTLREVVDEVGSDAVRFMMLFRKNDAVLDFDLAKVIEQSKDNPV FT FYVQYGHARGHSIFRNAREVVPDLPEDSKARAAMLRQAPLERLNDPAELELLKRLALYP FT RIVEAAAQAHEPHRIAFYLNELASEFHALWTHGRDLPHLRFIINNDAEITRARLAMVQG FT VVSVLASGLAILGVTAPDEMR" FT CDS complement(90781..91995) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2855" FT /product="dGTP triphosphohydrolase" FT /function="InterPro IPR000923:IPR003607:IPR006261:IPR006674 FT COGs COG0232" FT /db_xref="GOA:Q6N5W5" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006261" FT /db_xref="InterPro:IPR006674" FT /db_xref="UniProtKB/TrEMBL:Q6N5W5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28296.1" FT /translation="MSVGMAAPRAAFGCDPDHSRGRQFHEPPSRTRSAFRRDCDRVIHS FT NAFRRLKHKTQVFVFHEGDHYRTRLTHSLEVAQIARALARQLGLDEDLTETLALAHDLG FT HPPFGHAGERALDACLKDAGGFDHNAQTLRVLTALEHRYPEFDGLNLTWETLEGVVKHN FT GPLTDRTGAPLPRYAEHGVPRGITEFNQRFDLQLWSFASLEAQVAAIADDIAYDAHDID FT DGLRAGLFRIDDLIEVPLVARIIAAIDRRYPGLDDGRRGAELVRELISHFIGAVAAEAE FT RRIAETKPASANDVRRAEQALVAFPAETAKAEAEIKAFLWTRMYRAERVMKVMRDAEAI FT VADLFQRYCDHPSDLPPDWLPANGPVAECEADRLLRIRNFIAGMTDRYALAEHQRLFDS FT TPDLR" FT CDS 92102..92434 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2856" FT /product="Protein of unknown function, HesB/YadR/YfhF" FT /function="InterPro IPR000361 COGs COG0316" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5W4" FT /db_xref="InterPro:IPR000361" FT /db_xref="InterPro:IPR016092" FT /db_xref="InterPro:IPR017870" FT /db_xref="UniProtKB/TrEMBL:Q6N5W4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28297.1" FT /translation="MTESSVTISERAARRIGEILKGEGQGAMLRISVEGGGCSGFQYKF FT DVDRTKTDDDLVIAKEGAVVLVDSASVPFLAGSEVDFVDDLIGASFRVNNPNATASCGC FT GTSFSI" FT CDS 92629..93678 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2857" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N5W3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28298.1" FT /translation="MSRMGHQPPETSMSVPHSVPRPPLRVSSVHAGLIAALVLALSFGA FT MLALTFSMQNDVIARDRDHQMAAVSQAITAALDEAGRFALTQAETTARQHAVGRALAAG FT DRAALAELTAAPYAYLKSQGVPVFGFHAADMTYLLRLHLPDKFGDDLTKFRQMVLAANK FT TRRSQVGLEIGVAGTFVRGIAVINDGDRFVGTVEAGLNLEPILEQVKTLTNADIAVVLS FT QSLAELPPRGPGDKGEQFGDLIALASTDTPLFTGLLRDGAIRLARTREISPYRIGGETG FT AILVQPLIDFSGRMIGNIAAVKSFASHGAALQRTRIELIAAALIGIVLAFVAFSVLARM FT LKPRDEAQA" FT misc_feature order(92713..92781,93583..93651) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 93675..94739 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2858" FT /product="hypothetical protein" FT /function="InterPro IPR006202" FT /db_xref="GOA:Q6N5W2" FT /db_xref="InterPro:IPR006201" FT /db_xref="InterPro:IPR006202" FT /db_xref="UniProtKB/TrEMBL:Q6N5W2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28299.1" FT /translation="MRSRLAALLIIFVALCGTPASAASSPPEGLPEGVELPVKVRIGLR FT VLDITEIREVIGRARLYVEVTQRWTDPRRRFDPLDAGTSRIDRVGAEARQYIAGIWTPG FT LAIDNQLGEPRAKADAVSVYSDGSVVLVERYEADFRVGVDMAAFPFDRQRLSLSFSLPR FT YAKQDAMLVTTETDRLFSRIEPKLSVIDWRPLDLTFFYDEAAGWNARAYSRLNATIGIE FT RLSERYLLRLFIPIVSTLAVSLFVLWIPGTAPKDHGSLVFSALLALAAISFTYEASFPG FT SISLNTPIAKIISLGYFYLVVVVLIDALLWKPRSDPASRYHVLAIGLRSHCRWALPSIM FT VIVCLALVLRGLPG" FT sig_peptide 93675..93743 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.952 atresidue 23" FT misc_feature order(94356..94424,94452..94511,94548..94607,94665..94733) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(94766..95503) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2859" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5W1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28300.1" FT /translation="MATTITINLKNDSSTAQDFCFFQQPAQYSSSGPVYVSSLCGQPLL FT PYATSGAVISFMFTPKSYAGVQQQIAPPKPGQPVGQAGALRAIELTPAQGAPINNTTTM FT SVSPSLGLSMPTSTDDVPVGAFRIVTAVFDPTLTNYNAGVAMESLAGGILLSNFVTALP FT NARLDCTPSLKFYVQTGKYVAGTVLSFASLSPTAALCDAAAGYTAFGVSYNTDGTWTVK FT NMVAGLLKDGKPGLIVKSEFTTS" FT CDS complement(95627..96586) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2860" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5W0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28301.1" FT /translation="MATKITINVTNNSTSTQNFFFFQQPAVYSGGPKVYTNSLYSQTLL FT PYATSGSVLSFTMILQYYAGVQQQVDPPQIGQPSGQLGAIQPIELTPASGGTPTKNTTN FT MTVDPSLGLSVPVSTDGPQAGSFRIVTPVYDPVLMNYSAGSAVQSLTGAITLSNFVTAQ FT PNTNLDCQPIIKFYVQTGTYTAGTVMNFTSSSVGAALCDATPGFTTFNVSYNPNGTWTV FT KNMALSQLANGSRGLLEKSSFTTELNAAAQIAEVLNEAGTAVVSTGLAANFLRPVTVTN FT LTAPGAIIRNRDYQVGPVDGRHLGLTCTDVAGNTAVFD" FT CDS 97150..98061 FT /codon_start=1 FT /transl_table=11 FT /gene="xthA2" FT /locus_tag="RPA2861" FT /product="exodeoxyribonuclease III" FT /function="InterPro IPR000097:IPR004808:IPR005135 COGs FT COG0708" FT /db_xref="GOA:Q6N5V9" FT /db_xref="HSSP:1AKO" FT /db_xref="InterPro:IPR000097" FT /db_xref="InterPro:IPR004808" FT /db_xref="InterPro:IPR005135" FT /db_xref="InterPro:IPR020847" FT /db_xref="InterPro:IPR020848" FT /db_xref="UniProtKB/TrEMBL:Q6N5V9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28302.1" FT /translation="MARRLTRLPRQICVRRGLLYHSAARHDLPRRKSSRATDGAMRIAT FT WNVNSVRQRLDHLVSWLQDCQPDVVCLQEIKCVDEAFPREPIEALGYNVVTHGQKTFNG FT VALLSKYPLEEANPGLAGDESDVHARFLEGVVSLKHGVVRVACLYLPNGNPVGSEKYPY FT KLSWMARLRDYAQQRLKTEEPLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESFQT FT LLGLGLTDALRATTDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGIDSY FT VRNWEKPSDHVPVWADFDLEAA" FT CDS complement(98261..99082) FT /codon_start=1 FT /transl_table=11 FT /gene="exoR" FT /locus_tag="RPA2862" FT /product="putative exopolysaccharide regulatory protein FT exoR" FT /function="InterPro IPR006597 COGs COG0790" FT /db_xref="GOA:Q6N5V8" FT /db_xref="InterPro:IPR006597" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:Q6N5V8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28303.1" FT /translation="MRNFKRSVFAALLIGAGASAVPAAAFEGTPVRPEDTAIPVATSQP FT ATAPALKKALPAAPSTTSLTALQYAAEGGHPIAQWRLGKMYADGNGVDQDDLRAFDYFS FT KIANAHAEDSPSAPQAAIVANAFVALGRYYLDGIPNSKVKRDPERAREMFSYAASYFGN FT ADAQYDLARLYIDGVGVPRDFRYGARWLGLAAQKGQHQAQAMLGQLLFNGEKLPRQAAR FT GLMWLTLARDAATPEEAWIKDSYNKAFSKASDDDRVMALQMLEHWVQGRRD" FT sig_peptide complement(99005..99082) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.714 atresidue 26" FT CDS complement(99745..101166) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2863" FT /product="dihydrolipoamide dehydrogenase, E3 Component of FT Pyruvate dehydrogenase multienzyme complex" FT /function="InterPro FT IPR000205:IPR001100:IPR001327:IPR004099:IPR006258 COGs FT COG1249" FT /EC_number="1.8.1.4" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5V7" FT /db_xref="InterPro:IPR000815" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR006258" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="UniProtKB/TrEMBL:Q6N5V7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28304.1" FT /translation="MSETSFDVIIIGSGPGGYVAAIRAAQLGFKTAIVEKSYLGGICLN FT WGCIPTKALLRSAEIYHYMQHAKDYGLSADNISFDPKAIVQRSRGVSKRLNDGVGFLMK FT KNKISIIWGQATIDAPGKLTVAASKTDAPKGALPPGSYQAKHIIVATGARPRVLPGLEP FT DKKLVWTYFEAMVPEVMPKSLLVVGSGAIGIEFASFFHTMGAKVTVVEVLPQILPVEDA FT EIAALARKRFEKQGIKILTGAKVTKLDKKADSVVATIDPGNGKPETAEFDRVISAVGVV FT GNVENLGLDKLGVKLDRGTIVTDGLGRTNVPGLYAIGDVAGPPMLAHKAEHEGVICVEA FT IKGLHPHPLDKSLIPGCTYCQPQVASVGLTEAKAKEQGREIRVGRFPFTANGKAIALGE FT DQGLVKVIFDKKTGQLLGAHMIGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEM FT MKEAVLDAYGKVLNA" FT CDS complement(101242..102633) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2864" FT /product="dihydrolipoamide acetyltransferase" FT /function="InterPro FT IPR000089:IPR001078:IPR003016:IPR004167:IPR006257 COGs FT COG0508" FT /EC_number="2.3.1.12" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5V6" FT /db_xref="HSSP:1B5S" FT /db_xref="InterPro:IPR000089" FT /db_xref="InterPro:IPR001078" FT /db_xref="InterPro:IPR003016" FT /db_xref="InterPro:IPR004167" FT /db_xref="InterPro:IPR006257" FT /db_xref="InterPro:IPR011053" FT /db_xref="UniProtKB/TrEMBL:Q6N5V6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28305.1" FT /translation="MPINILMPALSPTMEKGNLAKWLKKEGDKVKSGDVIAEIETDKAT FT MEVEAADEGTLAKIIVPEGTQDVPVNDVIAVLAADGEDVKAAGAGWKASAGGAPSPQRG FT EGAGPSGGKAEANSHIQDKADQRPTPQPPSPLPNGERSLPQAAGEGAPAPANGRVFASP FT LARRLAKDAGIDIARVTGTGPHGRVIARDVEQAKSGGGLKAPASAPAGPAIAAAMSDQQ FT IRALYPEGSYEVVPHDGMRRTIAQRLTQSTQTIPHFYLTIDCNLDRLLAAREDINAAAP FT KDKDGKPAYKLSVNDFIIKAMAIALQRIPDANVSWTEGGMLKHKHSDIGVAVAMPGGLI FT TPIIRSAETQSLSSISAQMKDFAARARARKLKPEEYQGGTTAVSNLGMFGIKDFTAVIN FT PPHATILAVGTGEQRAIVKDGKIEVATMMSVTLSCDHRAVDGALGAELIGAFKTLIENP FT VMMMV" FT CDS complement(102646..102942) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2865" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="PDB:3IC3" FT /db_xref="UniProtKB/TrEMBL:Q6N5V5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28306.1" FT /translation="MTGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEM FT WGLLLVDIARHAARSYARESEYTEDEALERIVEMFEAELSRPTDTGATTERTQ" FT CDS complement(102947..104356) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2866" FT /product="pyruvate dehydrogenase E1 beta subunit" FT /function="InterPro IPR000089:IPR003016:IPR005475:IPR005476 FT COGs COG0022" FT /EC_number="1.2.4.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5V4" FT /db_xref="InterPro:IPR000089" FT /db_xref="InterPro:IPR003016" FT /db_xref="InterPro:IPR005475" FT /db_xref="InterPro:IPR005476" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR011053" FT /db_xref="InterPro:IPR015941" FT /db_xref="UniProtKB/TrEMBL:Q6N5V4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28307.1" FT /translation="MPIQVLMPALSPTMEKGNLSKWLKKEGDKVKSGDVIAEIETDKAT FT MEVEAADEGTLGKILIPEGTNDVAVNTPIATILGDGESAADADKASDPAAQSKASQSAP FT PSAEPEAAQAKSAPAPAQHAPEAPTVSAAADPDIPAGTEMVTVTIREALRDAMAEEMRR FT DPDVFVMGEEVAEYQGAYKVTQGLLQEFGDRRVIDTPITEHGFAGVGVGAGFAGLKPIV FT EFMTFNFAMQAIDQIINSAAKTLYMSGGQLGCSIVFRGPNGAASRVAAQHSQDYSAWYA FT QIPGLKVVAPYSAADAKGLLKAAIRDPNPVIFLEHEMLYGQHGEVPKLDDYVIPIGKAR FT IVREGKDVTLISWSHGMTYALKAADELAKDGIAAEVIDLRTLRPLDTDTIIASVKKTGR FT AVTIEEGWQQNGVGAELSARIMEHAFDYLDAPVTRVSGKDVPMPYAANLEKLALPSVAE FT VVEAAKAVCYR" FT CDS complement(104415..105449) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2867" FT /product="pyruvate dehydrogenase E1 alpha subunit" FT /function="InterPro IPR001017 COGs COG1071" FT /EC_number="1.2.4.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5V3" FT /db_xref="InterPro:IPR001017" FT /db_xref="InterPro:IPR017597" FT /db_xref="UniProtKB/TrEMBL:Q6N5V3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28308.1" FT /translation="MAAPKKSAAKETTQDKAGGASPSNVPPFTKEQELGAFLEMLLIRR FT FEEKAGQLYGMGAIGGFCHLYIGQEAVVVGMQMALREGDQVITGYRDHGHMLACGMEAN FT GVMAELTGRRGGYSKGKGGSMHMFSREKSFFGGHGIVGAQVSLGTGIAFANRYRGDGRV FT CLAYFGDGAANQGQVYESFNMAELWKLPVVYVIENNRYAMGTSVTRSSAQTDFSKRGVS FT FNIPGEQVDGMDVRAVKAAGDKAVAHCRAGNGPFILEMQTYRYRGHSMSDPAKYRSREE FT VDKIRNDQDPIEQVRKRLLGLDMTEDDLKAIDAEVRKVVNESADFAQHDLEPDPSELYT FT DVYR" FT CDS complement(105602..105919) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2868" FT /product="Septum formation initiator" FT /function="InterPro IPR007060" FT /db_xref="GOA:Q6N5V2" FT /db_xref="InterPro:IPR007060" FT /db_xref="UniProtKB/TrEMBL:Q6N5V2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28309.1" FT /translation="MVTRSRLKSILAGIALYAIAAAVIGYFGVNAYTGRYGLTAQQELD FT QEITALTAELVQLRQQRAEAEQRVSLLRSDRIDPDMLDERVRYQLDFANPADLVRMLPQ FT R" FT misc_feature complement(105824..105889) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(105824..105919) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.995) with cleavage site probability FT 0.579 atresidue 32" FT CDS complement(106008..106568) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2869" FT /product="possible flavin-dependent oxidoreductase" FT /function="InterPro IPR001687:IPR005025 COGs COG0431" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR005025" FT /db_xref="UniProtKB/TrEMBL:Q6N5V1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28310.1" FT /translation="MAPPYRVAAVVGSLRKQAYSLRTAQALSKLAPDTLKLDIVTLHGL FT SMYNQDLETDAPPADWTAFRDSIKASDAVLFVTPEYNRSIPGVLKNAIDVGSRPYGKSC FT FDKKPAGVLSNSPGAIGGFGANHHLRQCLVFLNMPTLQQPEAYVGGIGDAFVEDGALVK FT DSLREFLQKYIDAFAGFVAQQYK" FT CDS complement(106708..107850) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2870" FT /product="L-carnitine dehydratase/bile acid-inducible FT protein F" FT /function="InterPro IPR003673 COGs COG1804" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5V0" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q6N5V0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28311.1" FT /translation="MGGPLAGIKVIEIAQAIAGPMAGMILGDMGAEVIKVEKHDGGDDA FT RHWGPPFVDGDSLLFHTYNRNKRSVTLDIKNPDDVARLKQLVQDADILIQNLRSGVVAS FT CGIGPDVMCAVNPRLIYCSVWAFGKAGPLSKEPGFDPLLQAYGGVMSLTGGPGHPPTFC FT APPINDRATAQWCVIGALAALQQRHVTGKGCVIDTSLFDTAVGWVDMSLSGYLLDGEPP FT VRHGTASGTLAPYQVFETADRPIVIAAGNDRLFARCAGVLGHPEWSTDQRFARVRDRQA FT HRPVLIPLMQEVLKTRGATDWLAAFKSAGVPVSPVNDIAELAATEQLAAADLLRTMPDT FT GLKVAGLPILFDGQRPDPELATPKLGAHNHEVLGNRAAAE" FT CDS 107943..108557 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2871" FT /product="probable RhtB family transporter, amino acid FT efflux" FT /function="InterPro IPR001064:IPR001123 COGs COG1280" FT /db_xref="GOA:Q6N5U9" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/TrEMBL:Q6N5U9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28312.1" FT /translation="MVTAEFLITSLIVVASPGTGVLYTVATGLSRGPRASAIAAFGSTI FT GIVPHMAAAILGLAALLHTSAVAFQLFKYLGVAYLLYMAWKTLGERGPLSVDSDVGAPS FT ALQMTVTGVLINILNPKLSIFFLAFLPQFVSADDAHPLGRMIELSGIFMLMTFVVFVIY FT GLFAAWLRDHVITRPQVMTWLRRSFAAAFVALGAKLATAER" FT misc_feature order(107961..108029,108057..108125,108138..108197, FT 108255..108323,108384..108452) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(108709..109512) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2872" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N5U8" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28313.1" FT /translation="MDQMAEQRPSELAEATAALINHIVGAIETAAVVMEPFYHLEFVGI FT FPALVYAAMLQALPRNTDYRPMHGRSKGNDLADGTHTRVKIDLFPEYIRHLPPQQRSVW FT RMVGDALCSEPVKNAFRRKLAPALEKRFGPDAQEVGMFPIPILTRDVPGYKITPHTDTH FT WKGITVQLYLPRDEAHTDIGTIFHDVLPDGSMPKARQMKFAPNSGYAFAVDKLSWHSAD FT TVPAGVETRDSILLTYFVDQGPLKVLRNRGKRLGNFLLNEIRART" FT CDS complement(109597..110730) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2873" FT /product="possible NADH oxidoreductase" FT /function="InterPro IPR001687:IPR002085 COGs COG0604" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5U7" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N5U7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28314.1" FT /translation="MSETTGLQLRSLIKASGDLEVSLVPVSIPEPGPDEVVVRVEATPI FT NPSDLGLLFGAADMSSAKASGTPDAPVITAKVPEAAMKAMAGRLDESMPVGNEGAGTVI FT KAGSSDAAQALLGKTVAMIGGAMYAQYRLIKAADCLKLQDGTTAAEGASCFVNPLTALG FT MTETMKREGHKALVHTAAASNLGQMLNRICLKDGIDLVNIVRSEAQAKLLREIGAKYVV FT DSTAPTFLDDLTEALVKTGATIAFDAIGGGRLAGQILGCMEAAIGKTATGPYSRYGSNV FT LKQVYIYGSLDTKPTEIVRNFGFAWAAGGWLLFPFLQKIGAADAAKLRARVAAEIKTTF FT ASRYTKVVSLKEALTLDAIAIYNKRATGEKYLIDPTK" FT CDS complement(110841..112124) FT /codon_start=1 FT /transl_table=11 FT /gene="eno" FT /locus_tag="RPA2874" FT /product="enolase" FT /function="InterPro IPR000941 COGs COG0148" FT /EC_number="4.2.1.11" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5U6" FT /db_xref="InterPro:IPR000941" FT /db_xref="InterPro:IPR020809" FT /db_xref="InterPro:IPR020810" FT /db_xref="InterPro:IPR020811" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5U6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28315.1" FT /translation="MTAIVDIIGREILDSRGNPTVEVDVVLEDGSVGRAAVPSGASTGA FT HEAVELRDGDKARYLGKGVQKAVEAVNGELFDALGGMDAEQQVQIDQTMIELDGTPNKG FT RIGANAILGVSLAAAKAAAASYDMPLYRYVGGTSARTLPVPMMNIVNGGVHADNPIDFQ FT EFMIMPVGAPTFADALRCGSEIFHTLKGELKKAGHNTNVGDEGGFAPNLPSADAALDFV FT MAAIGKAGYKAGGDVMLALDCAATEFFKDGSYVYGGENKTRSRSEQAKYLADLVARYPI FT VSIEDGMSEDDMDGWKELTDLIGSKCQLVGDDLFVTNVTRLADGIKNGRANSILIKVNQ FT IGTLTETLAAVEMAHKAGYTAVMSHRSGETEDSTIADLAVATNCGQIKTGSLARADRTA FT KYNQLLRIEQELGAHAHYAGKAALKALR" FT CDS 112310..112786 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2875" FT /product="GTP cyclohydrolase I" FT /function="InterPro IPR001474 COGs COG0780" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5U5" FT /db_xref="InterPro:IPR016856" FT /db_xref="InterPro:IPR020602" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5U5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28316.1" FT /translation="MSKTPRKSAPSPSLQLGQAVEWPDRPEAAKLDRVPNPQKDTNFLA FT RFTAPEFTSLCPVTGQPDFAHLVIDYVPGPWLLESKSLKLYLASFRNHGAFHEDCTVAI FT GKRIATEIKPKWLRIGGYWYPRGGIPIDVFWQTGKLPKDVWVPDQGVQPYRGRG" FT CDS 113229..114734 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2876" FT /product="periplasmic glucans biosynthesis protein OpgG" FT /function="InterPro IPR006311 COGs COG3131" FT /db_xref="GOA:Q6N5U4" FT /db_xref="InterPro:IPR007444" FT /db_xref="InterPro:IPR011013" FT /db_xref="InterPro:IPR014438" FT /db_xref="InterPro:IPR014756" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5U4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28317.1" FT /translation="MNRRQVLTGLAALPLLQAKPDPAAADRSSSIDFDPWMVRKLAREL FT ASKPYEAPDSSLPASLNDLSYDAYRSLRFRPERALWRAENLPFQVQFFHRGFLYKNRVT FT IFEVADGKARHVPYRADDFSFGDVAPPPDSDLGFAGFRIHAPLQRADYYDEVSAFLGAA FT YFRAVTKGERYGLSARGLSIDTGQSSGEEFPLFKTFWLERPAPGASSMVVHALLDSKSV FT AGAYRFTIRPGDTTVFDVEMALYPRVDLQHAGLAPMTSMFLFGPNDPADTPDFRAAVHD FT SDGLAIFNGSGEELWRPLCNPKDLQISSFGDRNPRGFGLMQRERSFANYQDLESRYELR FT PSLWAEPIGDWTDGAVKLIEIPTREEVHDNIASFWEPKQPLRAKGEHIYTYRLHWGPDT FT PKPKGLARFVRTGVSARGDNDRLFVLDLAGDRLKTVDAAAVRGVVTADKGEIRNIVTQP FT NPAMGGWRLSFDLAQARAPVELRAVVCEGDAAVSEVWLYRWTP" FT sig_peptide 113229..113285 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.973) with cleavage site probability FT 0.906 atresidue 19" FT CDS 114722..116887 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2877" FT /product="putative glycosyltransferase family protein" FT /function="InterPro IPR001173 COGs COG2943" FT /db_xref="GOA:Q6N5U3" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5U3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28318.1" FT /translation="MDAVIAPRHEDCRDVERRAEPLPANAPLPMPVQSLLQSPRAAAVR FT SPAAWRRVLIMVATAVLSAAGIYEMYQVLQVGGITVLEGVVLVLFAALFAWVALSFVSA FT LAGFTVLCCGWRDDVGISTDGSLPSVSSRIAMLLPTYNEDAPVVFARLQATRQSVDETG FT RGAQFDWFVLSDSTDPSVWIDEERCYAELAATHDRLYYRHRPHNTARKSGNIADWVERF FT GGAYDFMVILDADSVMTGDVLVRVAAAMETNSDVGLIQTLPVVVQARTLFARVQQFAGS FT IYGPMIAAGTAWWHGSESNYWGHNAIIRVSAFAGSAGLPTLAGRKPFGGEILSHDFVEA FT ALMRRAGWRIHLAPTLRGSYEECPPSLLDFAARDRRWCQGNLQHGKLLTARGLHWVSRL FT HFLTGIGAYLTAPMWLAFLIAGILISLQAQFVRPEYFPKDFSLFPIWPAQDPVRAAWVF FT AGTMGLLILPKLLALFLVLIRSDTRRRFGGGLRTFGGVLLETMISALTAPVMMVFQSTA FT VIEILLGRDAGWQVQHRGDGAIPLREVVRRYALPTALGTTMAIGAWLVSWPLLLWMTPV FT IVGLLLAIPVALLTTRASRSRPLLMMTPEQIDPPAILAQVHALADRLCPANQTTDPLSA FT LRGDRRLRELHLAALAFHPPRRRGRIDPHLATARVLIDDAESYSEAAGWLGPREIRAVL FT GDRETLQRLLQLSGEHAQLAVGSEPSG" FT misc_feature order(114878..114946,114974..115042,115931..115999, FT 116087..116155,116189..116257,116420..116488) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(116884..118110) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2878" FT /product="possible MDR related permease" FT /function="InterPro IPR007114 COGs COG0477" FT /db_xref="GOA:Q6N5U2" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6N5U2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28319.1" FT /translation="MQPAGRAASSSRLPPALNIIALSSFAASLSTRALDPVLPRIADEF FT SVTITTAAGLAAVTAFTFAVVQPAIGALGDLFGKARLMIVCLALLGFASLLGALSSSFT FT VLFVCRILAGIGSGGVFPVALGLASDLVTVDRRQVAIGRVLGGSMAGNLLGASASGVIG FT DFLGWRGVLAILGVLVMIAAIAVAFGARGAKMPPRSAEMDLPALRRGYRTIFSNPNAAI FT CFTAVLIEGTCVMGVFPYVAAFLHEQGEQSLAIAGLVIAGFAIGGLIYTLTVSQLLPRL FT GTTGMMIGGGLLVALQLAAIMLGPHWQAQMFAFVLMGMGFYMLHGCIQVFASELTETAR FT GTAMSLHSFFFFMGQTTGPIAYGFGLSHLGKIATLTLTALTMATLGIVLARILKPRPPA FT DAVAGEVPL" FT misc_feature complement(order(116932..116994,117010..117075, FT 117115..117171,117202..117267,117289..117354, FT 117385..117450,117547..117612,117625..117690, FT 117712..117777,117793..117858,117898..117963, FT 118009..118074)) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(118030..118110) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.879) with cleavage site probability FT 0.566 atresidue 27" FT CDS complement(118110..118973) FT /codon_start=1 FT /transl_table=11 FT /gene="kdsA" FT /locus_tag="RPA2879" FT /product="2-dehydro-3-deoxyphosphooctonate aldolase" FT /function="InterPro IPR006218:IPR006269 COGs COG2877" FT /EC_number="2.5.1.55" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P61657" FT /db_xref="InterPro:IPR006218" FT /db_xref="InterPro:IPR006269" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:P61657" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28320.1" FT /translation="MNKSIAPATSVVAGNVKFGNALPLSVIAGPCQLESRAHALEVASA FT LKEIATRLGIGLVYKTSFDKANRTSAASARGLGLDAALPIFAEIRDHLGLPVLTDVHEN FT EQCARAAEAVDILQIPAFLCRQTDLLLAAAATGRIVNVKKGQFLAPWDMGNVVSKITHA FT GNSKVLVTERGVSFGYNTLVSDMRALPIMAKTTGAPVIFDATHSVQQPGGKGTSSGGER FT EYVPVLARAAVAVGVAGVFIETHPDPDHAPSDGPNMVPLREFEALIKTLMEFDALAKKR FT STVGAV" FT CDS complement(118970..119890) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2880" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5U0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28321.1" FT /translation="MLDGFALLAMTMVSSPPMSNGFDHIVHAVRDLDAAADLYQRLGFV FT VGARNVHPWGTHNRIVQFDRFFIELLTIGEPDKIPPHRDGVFSFGTFQRDYLVTREGLS FT MLLLASDDAAADLRRFTAAGIAAGDVFTFGREGRRPDGSVVGLQFSLAFARDALSPKTG FT FATCQHHYPENFWNPAFQAHANGARAAAAVVMVADNPTDHHIFLEAFTGSRDLRSSSIG FT VTAPTKRGDIEIVEPVSLRDQYGITVPSEGEGASFVGLRIAADDLGVVERLLQDHKVSA FT VRHVGRLVVPDVYGATLIFEQGTVR" FT sig_peptide complement(119831..119890) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.728) with cleavage site probability FT 0.592 atresidue 20" FT CDS complement(119986..120516) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2881" FT /product="conserved hypothetical protein" FT /function="InterPro IPR001687" FT /db_xref="InterPro:IPR012577" FT /db_xref="UniProtKB/TrEMBL:Q6N5T9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28322.1" FT /translation="MVTCISISTQRASEMLCLKRLIASLPGQSSTFLYIQFAKAMRNAA FT PCAVGKTTAVAYRYKRCNEVEGVMIYESRVYRCVPGKLPAILKRFETITLKLFEKHGIR FT QDGFFTTLVGASNQELTYLLAWESLAEREQKWTAFATDPEWLAAKAETEKDGQIVDTIT FT NQLLVPTAFSALK" FT CDS 120666..120941 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2882" FT /product="conserved hypothetical protein" FT /function="COGs COG3514" FT /db_xref="UniProtKB/TrEMBL:Q6N5T8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28323.1" FT /translation="MSPRSKEPVFDGENPEWTEQDFANARPPEEILPPEILAQFKNTRG FT PQKAPTKVPVSIRLSADVVEHYKATGPGWQSRIDETLRKAAKLKAG" FT CDS complement(120976..121833) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2883" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5T7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28324.1" FT /translation="MTPSVNLYAWAVPAWSSESPVDHTWVTSYDNQVHPYSTIADVVVA FT GQSFWYCWGSFHPQGGTPINPTGALGQQSGNLKLAQCLVQPNADSNTTPAARGKIYTYG FT VDGVCHQLANQVLYATANGSVPPLTVSKARGYPLSSFIYGTYGLQQTAWAAKVASCSGA FT QLVARLARPGGLTVVAGGEGIAVDEFERRATEVLATEPAKLASLLRLRGEVQRFAAQPW FT PGTGQPSAEALNARNQHLIDEAAKLLGPEHFRKLFGAEPGAKVTLVDPRTAATAGEFPP FT PKPR" FT CDS 121964..122341 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2884" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR008727" FT /db_xref="UniProtKB/TrEMBL:Q6N5T6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28325.1" FT /translation="MAAPSRRTANAQLCPACGVVPSVIVLLILSVAPTRAESPGSAPPG FT VVTGGSQDVIVGGKPAARAGDATSDGAIVEGSKNVFINGKPAAIGGSRTGCGSVVIGSG FT SGVFINGKPVARAGDSTANCK" FT misc_feature 122000..122059 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 122451..122597 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2885" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5T5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28326.1" FT /translation="MARMYKVLADDNLDYASALRKVRLEAIHGKIKAAQALSVWAAFVL FT FEN" FT CDS complement(122611..124242) FT /codon_start=1 FT /transl_table=11 FT /gene="pyrG" FT /locus_tag="RPA2886" FT /product="CTP synthase" FT /function="InterPro IPR000463:IPR000991:IPR004468 COGs FT COG0504" FT /EC_number="6.3.4.2" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5T4" FT /db_xref="HSSP:1S1M" FT /db_xref="InterPro:IPR000991" FT /db_xref="InterPro:IPR004468" FT /db_xref="InterPro:IPR017456" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5T4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28327.1" FT /translation="MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLN FT LDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGRPATKQDNITTGRIYQDILTKERR FT GDYLGATIQVVPHVTNAIKEFIVSDNDGYDFVLVEIGGTVGDIEGLPFFEAIRQIKNDL FT PRGDVIYIHLTLLPYIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDRPIPKEERRK FT LGLFCNVRESAVIEARDADSIYAVPEAYHAAGLDDEVLAAFAIAAKEPPQLGRWHEINE FT RIRNPEGAVTIAIVGKYTGMKDAYKSLIEALSHGGIANKVQVKLDWIESEVFENEDPAP FT FLEHVNGILVPGGFGQRGAEGKIEAARFARERNVPYFGICFGMQMAVIEAARNLAGIEQ FT ANSTEFGPTPEPLVGLMTEWVRGNELEKRSQAGDLGGTMRLGAYPATLKRGSRVSQVYG FT GVTEISERHRHRYEVNTAYKDRLEQHGLKFSGMSPDGVLPEIVEYEDHPWFIGVQFHPE FT LKSRPFDPHPLFASFVQAALVQSRLV" FT sig_peptide complement(124165..124242) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.872) with cleavage site probability FT 0.671 atresidue 26" FT CDS complement(124409..124813) FT /codon_start=1 FT /transl_table=11 FT /gene="secG" FT /locus_tag="RPA2887" FT /product="possible secG: preprotein translocase" FT /function="InterPro IPR004692 COGs COG1314" FT /db_xref="GOA:Q6N5T3" FT /db_xref="InterPro:IPR004692" FT /db_xref="UniProtKB/TrEMBL:Q6N5T3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28328.1" FT /translation="MQTVIIVIHLMFVLGLIGVVLLQKSEGGGLGVGGGGGFMSSRGTA FT NLLTRTTAILAAGFFATSLLLTWLASYDRKPATILPTAAPVQQQVPGQPAPPLSQGGGL FT LDTLKQTDQQQNQQPAAPAAPAAPTPPQSQ" FT misc_feature complement(order(124607..124672,124748..124798)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(124989..125825) FT /codon_start=1 FT /transl_table=11 FT /gene="cbbJ, tpi, tim" FT /locus_tag="RPA2888" FT /product="triose-phosphate isomerase" FT /function="InterPro IPR000652 COGs COG0149" FT /EC_number="5.3.1.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5T2" FT /db_xref="HSSP:1AW1" FT /db_xref="InterPro:IPR000652" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020861" FT /db_xref="UniProtKB/TrEMBL:Q6N5T2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28329.1" FT /translation="MSLAIGSASGTLQPFIARVLMPVPAVRPLIAGNWKMNGLKDSVAE FT LDAMLKGAAELPQGIDLLVCPPATLVASFAARVAEAQAGKALPFSIGGQDCHANASGAH FT TGDIAAEMLADAGAAAIIVGHSERRADHAENDAIVRAKAQAVWRAGLVAIVCVGETQGE FT RDAGHTLDVVAGMLAGSLPDGATAANLVVAYEPVWAIGTGRTPTAADVEEVHGFIRKTL FT SDRFGAAGETMRILYGGSVKPSNARELLAVPHVNGALIGGASLKASDFLAIAAGCP" FT CDS 126023..127924 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2889" FT /product="putative peptidyl-prolyl cis-trans isomerse D" FT /function="InterPro IPR000297 COGs COG0760" FT /EC_number="5.2.1.8" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5T1" FT /db_xref="InterPro:IPR000297" FT /db_xref="UniProtKB/TrEMBL:Q6N5T1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28330.1" FT /translation="MLRGMRKASSNWIGKTIMTIVMGVLIVSFGVWGIADVFRGFGRST FT LAKIGSTEISTEQFRQTYNDRLQQIGRQFGRPLTPDQARAIGIDRQVLQQTIAEAALDE FT DARRLGLGQSDADTMKSILEDPNFKGANGQFDANRFQQLIRQFGFTEQRYLAEQRRVAL FT RRQIAGSLTAGLEAPKTLMQALSQFQSEERAIDYLKLTDAQAGTIAAPSPADLTAFYDS FT HKAQFRAPEYRKISFLVVTPESIAKWAEVSDADAQKLFEQRKDKLSTPEKRQLLQIVFP FT SVEEAQAGRAKIASGTSFADLAKERGVKPADLDLGLVSQSEMLDQKVAAAAFALPLNEV FT SQPVQGQFGTVLLEVTKIETGKQPDYASVAASLKRDLAQERARKQVQELHDKMEDARGG FT GASVVDAAKQLGLTAVTVDAIDRAGRGPDGAPVASIPQGLELANAAFNSEPGVDNDAIS FT FQNGYVWYDILGITPSHERPLDEVKDKVEAGWRAEQVTEKLRKLAAELVQKLQGGAKLS FT DVAPAGVTVQTASGIKREGADAGLPNTVVDAVFRTAKDGAGQVQGGSATEWYVFRVTGD FT TVPTADLNAPQMQQLKDNLVQRLRDEQVGEYIAWLEKDIGTKVNQEAVAQATGAAAN" FT sig_peptide 126023..126124 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.798) with cleavage site probability FT 0.658 atresidue 34" FT misc_feature 126056..126124 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 127961..128977 FT /codon_start=1 FT /transl_table=11 FT /gene="trpD" FT /locus_tag="RPA2890" FT /product="anthranilate phosphoribosyltransferase" FT /function="InterPro IPR000312:IPR005940 COGs COG0547" FT /EC_number="2.4.2.18" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5T0" FT /db_xref="InterPro:IPR000312" FT /db_xref="InterPro:IPR005940" FT /db_xref="InterPro:IPR017459" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5T0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28331.1" FT /translation="MVDFKSIIAKVATGATLTRDEATDAFDAMMSGDATPSQMGALLMG FT LRVRGETVDEITGAVTTMRAKMLPVTAPADAVDIVGTGGDGSGSVNVSTCASFVVAGCG FT VTVAKHGNRALSSKSGAADVLAALGVKIDITPEQVGRCVNEAGIGFMFAPTHHPAMKNV FT GPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLKNLGSEAVWVVHGS FT DGLDEITLSGTTAVAELKNGEITSFEISPEDAGLPRAPADALKGGDAQANAVALRAVLE FT GMPGPYRDVALLNAAATLVVAGKARDLKEGVALGTQSIDSGAAEARLKKLIAVSAAA" FT CDS 129042..129905 FT /codon_start=1 FT /transl_table=11 FT /gene="trpC" FT /locus_tag="RPA2891" FT /product="indole-3-glycerol phosphate synthase" FT /function="InterPro IPR001468:IPR003009 COGs COG0134" FT /EC_number="4.1.1.48" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5S9" FT /db_xref="InterPro:IPR001468" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013798" FT /db_xref="UniProtKB/TrEMBL:Q6N5S9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28332.1" FT /translation="MAGTSSAMTEYKRSFTRTGRAIVSDILTKIEAYKREEIAAAKRER FT PLAAIEAIAREASPPRGFVKALRAKHAAGDYGLIAEIKKASPSKGLIRADFDPPALARA FT YEAGGAACLSVLTDTPSFQGSLDYLVAARAAVSLPALRKDFMYDTYQVVEARAHGADCI FT LIIMAALDDAEAKDIEDAAFDLGMDVLLEVHDAPELERALKLRSPMVGVNNRNLRSFEV FT TLATSEALAPLIPKDRLMVGESGIFTPADLARLARVGMSTFLVGESLMRQQDVTAATRA FT LLARAA" FT CDS 129916..130446 FT /codon_start=1 FT /transl_table=11 FT /gene="moaC" FT /locus_tag="RPA2892" FT /product="molybdenum cofactor biosynthesis protein C" FT /function="InterPro IPR002820 COGs COG0315" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5S8" FT /db_xref="InterPro:IPR002820" FT /db_xref="UniProtKB/TrEMBL:Q6N5S8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28333.1" FT /translation="MAKTAKSTSKPEATPPALTHIGASGEARMVDVSEKPATERVAVAE FT GRVVMKKATLELILSGDAKKGDVLGTARVAGIMAAKRTADLIPLCHPLALSKVTLDITP FT DAKLPGCIVRATVKVTGPTGVEMEALTAVSVACLTIYDMIKAAERGVRIEGIHLIAKTG FT GKSGDYVASASRK" FT CDS 130484..133042 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2893" FT /product="putative cation-transporting ATPase" FT /function="InterPro IPR001757:IPR004014:IPR005834 COGs FT COG0474" FT /EC_number="3.6.1.-" FT /db_xref="GOA:Q6N5S7" FT /db_xref="HSSP:1KJU" FT /db_xref="InterPro:IPR000695" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR004014" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006068" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="UniProtKB/TrEMBL:Q6N5S7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28334.1" FT /translation="MSAELASASDTISGLSEREAAARLASEGYNELPSPDRRTLLGIVL FT EVVREPMLALLLGGGVVYMALGDLKEAIILLIFATLSVVITVVQEARTERVLETLRDLT FT SPRALVIRDGIRKRIAGREVARGDVMVLSEGDRVAADAVLLQADDLLVDESLLTGESVP FT VRKLSRGEADATTLRRPGGDDQPAVYSGSLVVRGGGLAEVVATGPRSEIGKIGQALGSL FT QTEAPRLQIQTRAVVRTFGFIAAGFTALVVVLYGTLRDGWLDAVLAGITVGMSMLPEEF FT PVVLTVFMAMGAWRISQARVLTRRAAAIEALGSATVLCTDKTGTLTENRMSVAELRLTS FT GEVFRPREGGALPVGFATLLETGLLAAAPDPFDPMDQALHRLAGDHLPGGSGDRTLVHS FT YGLRRDLLAMTQVWRDTDDRSDYVVAAKGAPEAIARMCGLDDATLGALSGAVDAMATEG FT LRVLGVARTSHPDQDWPATQLGFRFEFLGLVGLADPLRAAVPAAVADCRAAGIRVVMIT FT GDYPATAQAIARQAGIDAETCVTGEEIAALDDAALAERLRRATVFARIMPEQKLRIVQA FT LKADGEVVAMTGDGVNDAPSLKAAHIGIAMGGRGTDVAREASAIVLLDDDFASIVKAVR FT LGRRIYDNLVKAMGFIFAVHVPIAGLALLPLLFGLPILLGPIHIAFLEMIIDPVCSIVF FT EAETAEDDAMRRPPRDPEQPLFSRALIVWGMLQGLLVFLLVAGVFVIGQMRAMPDTELR FT ALTFFALVLSFVGLIFVNRSFSASLLTALRRPNAMLAGMLGIVAVVLIASLAWPWLRDL FT FRFGPLHPDDLGLTAAAALLVLIVLELVKPLWRKMMRQPG" FT misc_feature order(130697..130756,131189..131257,131285..131353, FT 132425..132493,132503..132571,132641..132709, FT 132737..132805,132839..132907,132950..133003) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(133170..133646) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2894" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5S6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28335.1" FT /translation="MRSTNFERTYSPGAPSVTALRPSVTVYDHPDQVLRDDALSTADKR FT AILSSWASDANAVEQQPWLRLAPGHRNPVPLRAILDALQRLDDDDPPPKGGASIRLSGD FT RAAQHDLSEDDRPSRRRHYGLAPRINQFRPVPLPGVRRDHAARARRATAGRTQG" FT CDS 133885..134385 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2895" FT /product="possible small heat shock protein" FT /function="InterPro IPR002068 COGs COG0071" FT /db_xref="GOA:Q6N5S5" FT /db_xref="HSSP:1SHS" FT /db_xref="InterPro:IPR002068" FT /db_xref="InterPro:IPR008978" FT /db_xref="UniProtKB/TrEMBL:Q6N5S5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28336.1" FT /translation="MNMRDIIPWGRTNQPATRSFEGDPFLSLHREMNRLFDDVFRGFDL FT PARAGTLAPFSTGWPKLEITDGDKELKIAAAVPGLEEKDIEVLLDDGTLTIRGEKTSST FT EAKDKQFSEHFYGKFERRIPLDVAVAADQVSASFKNGVLTVTLPKAEPSPSTAKRIEIQ FT KTN" FT CDS 134554..134802 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2896" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR009875" FT /db_xref="UniProtKB/TrEMBL:Q6N5S4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28337.1" FT /translation="MTQPRRFARVRPSGLVSGNANLIVGPKLPVIPCRVVDYSAGGACI FT ELNADASLPQRFELLHGATKKKCRMVWKQGRRVGLCF" FT CDS complement(134842..135822) FT /codon_start=1 FT /transl_table=11 FT /gene="motB2" FT /locus_tag="RPA2897" FT /product="possible chemotaxis protein MotB2" FT /function="InterPro IPR001993:IPR006665 COGs COG1360" FT /db_xref="GOA:Q6N5S3" FT /db_xref="InterPro:IPR006665" FT /db_xref="UniProtKB/TrEMBL:Q6N5S3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28338.1" FT /translation="MLQSPCTACGVAAPGFDQRRSAHALRISHLVAVVDRIGSSPMKGG FT GGRLSSGNNKKKAEEAHATHGWFVTFADLMGLLVSFFVMLVSFSTQDLRKMQIVAGSMR FT DAFGVQQNSRFAGVIETDGVPVQGKVKSKMNVAPEQASNTPHLEESGGSGSAASHAKAE FT REFALASASLRQALQDVPELAEMSKNVVFEETPVGLNLELTDQDGRPMFPDGSAVPYER FT TRKLVARLAAPLRATSLRVIIVGHTAATVVQAGDDDPLSLSVNRANAVREVLKQEGLPS FT SQVLSLVGKGDGEPLFPDAPALAANRRVTITLMRENPPLPPDLQR" FT misc_feature complement(135559..135624) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 135959..136585 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2898" FT /product="Haloacid dehalogenase-like hydrolase" FT /function="InterPro IPR005834:IPR006402 COGs COG1011" FT /db_xref="GOA:Q6N5S2" FT /db_xref="InterPro:IPR005833" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006402" FT /db_xref="UniProtKB/TrEMBL:Q6N5S2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28339.1" FT /translation="MTTALAPGAADALLFDLGRVVIDYDLRRTLKAWAVELGSDPHALM FT AKLAQNDTFHRYETGHVTDAEFFAAVRTALGLTLTDAQLREGWNAIFIGEMPGIAPLLD FT RAAKQLPLYALSNTNDSHIAHFSEHYAELLVHFRELFLSSRIGMRKPNGETYDFVVKAI FT GIAPQRIVFFDDLAENVEAARERGLYAVQVHSSDDVARTLDQLGL" FT CDS 136616..137104 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2899" FT /product="conserved hypothetical protein" FT /function="COGs COG0824" FT /db_xref="UniProtKB/TrEMBL:Q6N5S1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28340.1" FT /translation="MMTTAAADLAWDHPAPFTLPMTPAPADIDGLNHTNNSVYVRWCDS FT VGWAHSEALGLSLTDWQRIDRAMAIRRGEYDYLLPSHLGDELLLGTWIYGSDGKLVMER FT RFQLIRLRDGATIMRGRWQLVCIELSSGRPRRLPPEFASVYLPVMIKADDGGEAPATA" FT CDS 137252..137665 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2900" FT /product="possible rifampin ADP-ribosyl transferase" FT /db_xref="GOA:Q6N5S0" FT /db_xref="UniProtKB/TrEMBL:Q6N5S0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28341.1" FT /translation="MSAAASMFVRQFFHGTRADLSPGELIVVGYQSNFTTAAPLSWVYF FT SGTLDAAIWGAELAAGDAPQRIYVVEPTGPFEDDPNLTDKKFPGNPTLSYRSKHPLRIV FT AEMTKWQGHSPERVQQMKDGLARLSAEGAEIID" FT CDS complement(137709..138050) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2901" FT /product="hypothetical protein" FT /function="InterPro IPR000104" FT /db_xref="UniProtKB/TrEMBL:Q6N5R9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28342.1" FT /translation="MEDFPKWFLRIMVVVGIIAFGSVYWMRHDWSKGWAPSFNAGDYGP FT PPASAPEPAAPAATAPVAAPAAAPSEAARPTAAPSAQAGRASTPCQPIGRTAKGELVYS FT MDCRALPAQ" FT misc_feature complement(137973..138029) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 138250..139461 FT /codon_start=1 FT /transl_table=11 FT /gene="moeA" FT /locus_tag="RPA2902" FT /product="molybdenum cofactor biosynthesis protein A" FT /function="InterPro IPR001453:IPR005110:IPR005111 COGs FT COG0303" FT /db_xref="GOA:Q6N5R8" FT /db_xref="InterPro:IPR001453" FT /db_xref="InterPro:IPR005110" FT /db_xref="InterPro:IPR005111" FT /db_xref="InterPro:IPR020817" FT /db_xref="UniProtKB/TrEMBL:Q6N5R8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28343.1" FT /translation="MALMPVDDALAAVLAGAHGLDTELVALEDAYRRVLARDLAALRTQ FT PPQAMSAMDGYAVRAADVAATPATLQVIGEIAAGRPATIGIGPGEALRIFTGGVVPDGS FT DAVVIQEDTARDGDRVTVNEAVRPGRHIRPAGIDFKEGQVLLRQGHRLSDRDLALAAGM FT NHAALPVHRRPRLAMLATGDELVMPGTTPAPGQIVYSNGYALRALARAEGADVIDLGIA FT ADTLEATQAAIRQARDLGVDLLVTTGGASAGDHDLVKGALEAEGTAIAFWKIAMRPGKP FT MMHGHLGPMRVIGLPGNPVSSYVCAVLFMVPLIRALCGMSQPRHVREPALLGADLSAND FT QREDYLRATLSHDDTGRQVATPVDSQDSSLLARLATAEALIVRPAFAPAASTGSPCVIL FT KLPL" FT CDS 139521..140348 FT /codon_start=1 FT /transl_table=11 FT /gene="lexA" FT /locus_tag="RPA2903" FT /product="SOS response transcriptional repressor, lexA" FT /function="InterPro IPR006197:IPR006198:IPR006199:IPR006200 FT COGs COG1974" FT /EC_number="3.4.21.88" FT /db_xref="GOA:P61614" FT /db_xref="InterPro:IPR006197" FT /db_xref="InterPro:IPR006199" FT /db_xref="InterPro:IPR006200" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/Swiss-Prot:P61614" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28344.1" FT /translation="MSVHDLFSRFGDDHALARARRPNRNTPRTGSLSPTGDSPMLTRKQ FT FELLKFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNRARAIE FT VIKLPDTGGMPGNSRRGFTPSVIEGNLGKVRPPSPTPAEDDHDRGSVAVPVMGRIAAGT FT PIEALQSRSHTISVPADMLGSGEHYALEVRGDSMVEAGILDGDMALIQKNDVADTGDIV FT VALIDEEEATLKRFRRRGASIALEPANAAYEVRILPPNRVRIQGKLIGLYRKY" FT CDS complement(140419..142686) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2904" FT /product="possible DNA uptake protein, ComEC" FT /function="InterPro IPR004477 COGs COG0658" FT /db_xref="InterPro:IPR004477" FT /db_xref="UniProtKB/TrEMBL:Q6N5R7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28345.1" FT /translation="MERRDRTRARTWPTRAPAGAGALLPFGLSWGPAFFDLLRDWVRAE FT AGPGRLLPWTPVAFGAGIALYFAADHEPVAWVAAATAAGFVIAAVLLRRSRAFAPVLLL FT TALLAGFATASLKAARIAHPVLAAPVFAAELRGFVEIREERERTDRFVLRVTQMQAARA FT PTLERVRLSVKKGTAPTVGSFVTLKARLQPPLQPLRPGSYDFARDLYFQGIAASGFVLG FT AITTTEPPQDGGWRLRYAAVMQGLRDAIDARIRASLGGDPRAIATALLTGKRDAISTPV FT NDAMFISGLGHVLSISGYHMAVVAGVVFFALRALLALIPRLTVTFPIKKVAAAVALLAA FT AFYLALSGAEVATQRSFLMTAVVLIAVMVDRRAITFRTLALAALVVLLIAPEALVHPSF FT QMSFAATLGLVALIQIGMPALFAQADSSTAARVALWGGREIALLALASLVAGFATMPYA FT AYHFHRITPYGVLSNLAAMPVVSAIVMPAGLLGLAAMPFGLDAPFWRIMELGIDWMILV FT AQWVASLPGAVGRVTAFGTGPLLVASLGIVMLGLLRSPLRWGGALAVGVAVAWAALTPQ FT PEVLIAGDGRQVAVRGADGRLHLMQSGADAFRLKEWLAADADSRAPDAASLRAGVSCDP FT DGCVTPLADGRLVALSLRPDGLADDCARAVLIITAGQPPPDCAARVIGRDELQANGALA FT LRRSGSDPGLFVAEATRPRGPSRPWAPAAAEAIDATVSTGPSVRRPPVDATPAPQDQAG FT EE" FT misc_feature complement(order(140968..141018,141040..141105, FT 141217..141282,141304..141369,141415..141480, FT 141502..141567,141628..141693,141733..141798, FT 142339..142395,142411..142467,142480..142545)) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(142779..144461) FT /codon_start=1 FT /transl_table=11 FT /gene="glnS" FT /locus_tag="RPA2905" FT /product="glutaminyl-tRNA synthetase" FT /function="InterPro IPR000924:IPR001412:IPR004514 COGs FT COG0008" FT /EC_number="6.1.1.18" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5R6" FT /db_xref="InterPro:IPR000924" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR004514" FT /db_xref="InterPro:IPR011035" FT /db_xref="InterPro:IPR020056" FT /db_xref="InterPro:IPR020058" FT /db_xref="InterPro:IPR020059" FT /db_xref="InterPro:IPR020060" FT /db_xref="InterPro:IPR020061" FT /db_xref="UniProtKB/TrEMBL:Q6N5R6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28346.1" FT /translation="MTTADTAAGEAGRDFIRDIVQADLDSGKHRTIVTRFPPEPNGYLH FT IGHAKSIALNFGIAQEFGGRCHLRFDDTNPTKEEQEYIDSIQADVRWLGFDWGEHMFYA FT SDYFEQLYAWAELMIKNGDAYVDDQSQDEIRASRGTLTEPGKNSPFRDRSVEENLDLFR FT RMKAGEFPNGARVLRAKIDMASGNINLRDPVLYRILHAHHPRTGDKWSIYPSYDYAHGQ FT SDAIEGITHSICTLEFEDHRPLYEWLLSKLPVPSQPRQYEFARLNITYTLLSKRVLTEL FT VRGGHVAGWDDPRMPTIAGMRRRGVPPAALRDFVKRIGVAKANSVVDLGMLEFCIREEL FT NRTAQRRMAVLKPLKVVIENYPEGQTEELEAINHPDDPSLGTRKIAFGREIYIEQDDFM FT ENPPKKFFRLSPGNEVRLRYAYFIKCRDVIKNDAGEIVELRCTYDPETRGGNAPDGRKV FT KATMHWLPAAQSVKAEIRIYNQLFANPAPSASTFADDLNPQSLEVLTEARIEPETAAST FT SAEPLQFERQGYFVRDRDSTADKPVFNRTIGLRDTFAKEVAKG" FT CDS 144623..146044 FT /codon_start=1 FT /transl_table=11 FT /gene="gltX" FT /locus_tag="RPA2906" FT /product="glutamyl-tRNA synthetase" FT /function="InterPro IPR000924:IPR001412:IPR004527 COGs FT COG0008" FT /EC_number="6.1.1.17" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5R5" FT /db_xref="InterPro:IPR000924" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR004527" FT /db_xref="InterPro:IPR008925" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR020058" FT /db_xref="InterPro:IPR020060" FT /db_xref="InterPro:IPR020061" FT /db_xref="InterPro:IPR020751" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5R5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28347.1" FT /translation="MTRPVVTRFAPSPTGFLHIGGGRTALFNWLYARKHGGTMLLRIED FT TDRQRSTQEAIDAILDGLKWLGIDWDGDTVYQFARAARHREVAEQLLAAGKAYRCYATA FT EELTAMRDKARAEGRAKLYDGSWRDRDPSEAPAGVKPTIRLKAPLTGETVIEDQVQGRV FT AWQNENLDDLVLLRGDGTPTYMLAVVVDDHDMGVTHVIRGDDHLINAARQKQIYDAMEW FT ELPVMAHIPLIHGPDGSKLSKRHGALGVDAYRAMGYLPAALRNYLVRLGWSHGDQEIFT FT TQEMIDAFDLPAIGRSAARFDFAKLESLNGHYIRQSDDHSLVTLLEDLLKYIPQGPAIA FT TKFDDSIRAKLTQAMPGLKERAKTLIELLDNAGFIFADRPLALDPKAQAVLTPETRQLI FT GRLRAALEDVSPWTAATTEAAMRAFAEQAGLKLGAVAQPLRVALTGRTTSPGIFDVLAV FT LGRDECLSRLADQSA" FT CDS 146195..147499 FT /codon_start=1 FT /transl_table=11 FT /gene="cisY" FT /locus_tag="RPA2907" FT /product="citrate synthase" FT /function="InterPro IPR002020 COGs COG0372" FT /EC_number="2.3.3.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5R4" FT /db_xref="HSSP:1K3P" FT /db_xref="InterPro:IPR002020" FT /db_xref="InterPro:IPR010953" FT /db_xref="InterPro:IPR016141" FT /db_xref="InterPro:IPR016142" FT /db_xref="InterPro:IPR019810" FT /db_xref="UniProtKB/TrEMBL:Q6N5R4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28348.1" FT /translation="MDATTNNKTATLTVGNKNFDLPVLTGTVGPDVIDIGKLYAQTGMF FT TYDPGFTSTASCQSKITYIDGDAGVLEYRGYPIEQLAEKGDFLETCYLLLYGELPTKAQ FT KEDFDYRVTRHNMVHEQMARFFQGFRRDAHPMAVMVASVGALAAFYHDSTDINDPTQRM FT VASIRMIAKVPTLAAMAYKYSVGQPFIYPKNTLSYAANFLRMCFATPCEEYVVNPVLAN FT ALDKIFTLHADHEQNASTSTVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALAMLK FT EIGTVENIPDFIAKVKDKSSSVRLMGFGHRVYKNYDPRAKIMQQVCHEVLAETGHHGDP FT LLKVAMELEKIALSDQYFIDRKLYPNVDFYSGITLKAMGFPTDMFTVLFAVARTVGWIS FT QWSEMIEDPQQKIGRPRQLFTGATTRNYVEIGKRG" FT terminator 147522..147553 FT /note="TransTerm prediction, 98+%" FT CDS complement(147594..148238) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2908" FT /product="Cytidine/deoxycytidylate deaminase:Tat pathway FT signal" FT /function="InterPro IPR002125:IPR006311 COGs COG0590" FT /db_xref="GOA:Q6N5R3" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR006311" FT /db_xref="InterPro:IPR016193" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6N5R3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28349.1" FT /translation="MKKTKIESASALDTLFASVTVVHRRNFLATGAAAFGAAVLPAGAT FT VADAKPALATAPTEQDRRYMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVL FT RDNDPSAHAEVNAIRAACKKVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAASW FT TDYADLFDDSNIGADMKKPYAKRQVKIAQMMRGDAQKVWNEFRALPDRARY" FT sig_peptide complement(148095..148238) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.983) with cleavage site probability FT 0.447 atresidue 48" FT CDS complement(148388..149569) FT /codon_start=1 FT /transl_table=11 FT /gene="lpxB" FT /locus_tag="RPA2909" FT /product="lipid-A-disaccharide synthase" FT /function="InterPro IPR003835 COGs COG0763" FT /EC_number="2.4.1.182" FT /db_xref="GOA:Q6N5R2" FT /db_xref="InterPro:IPR003835" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5R2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28350.1" FT /translation="MSGAAKTGDRVRTVYLIATEESGDRLGAALMRELRARLGSKVRFA FT GVGGHCMAGEGLASLFPIEELSIIGFAAVVQRLPMILKLIRRAVDAVLTAKPDILVIID FT SPDFTHRVARRVRQRDPSIPIVDYVSPTVWAWRPGRARAMLGYVDHVLALLPFEPAEYR FT RLQGPPCSYVGHPLTEQFGSLRPDAAEQARREASPPVLLVLPGSRRSEVRHHAAAFGDT FT LARLKHEGVAFEAVLPTTPHLEGLVRAAVASWEVQPRIVVGEQDKRAAFRIAHAALAKS FT GTVTLELAIAGVPMVTAYRAGSVEIWIARRVVRPGTVILANLVMGDDVIPEFIQEDCVP FT DKLVPAVRDLLGNTPARRRQLAGFAKIDDILSTGEQTPSGRAADIVLDVMRHA" FT CDS complement(149566..150423) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2910" FT /product="conserved hypothetical protein" FT /function="COGs COG3494" FT /db_xref="InterPro:IPR010415" FT /db_xref="UniProtKB/TrEMBL:Q6N5R1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28351.1" FT /translation="MTDPLLQIGAPVGIIAGGGTLPFAVADSLAARGLTPVLFALKGSC FT DPERVTAYRHHWLRMGAFGRLLRLLRDEGCRDLVFIGSLVRPALSDMRLDWGAIKVLPA FT VLAAYRGGDDHLLTGVGRLFERHGFRLLGLKDVATDLLMPAGCLTRAAPDAGVEADIAK FT GRAVLAALSPFDIGQGCVVIDGHVVAVEDTGGTDELLRRVAQLRDSRRIRAKPGHGVLV FT KAPKTGQDLRFDLPALGPKTIEGLITAQLGGVAVVAGHTVVAEPQEMIAAADKAGVFAI FT GMPA" FT CDS complement(150442..151284) FT /codon_start=1 FT /transl_table=11 FT /gene="lpxA" FT /locus_tag="RPA2911" FT /product="acyl-acyl carrier protein-UDP-N-acetylglucosamine FT O-acyltransferase" FT /function="InterPro IPR001451 COGs COG1043" FT /EC_number="2.3.1.129" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5R0" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR010137" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/TrEMBL:Q6N5R0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28352.1" FT /translation="MSTIDPTARIEDGAVIGDDVTIGPFCTIGPHVSIGAGTTLIGHVN FT VTGHTTIGEGCTIHPFASLGGAPQSTGYKGEPTTLIIGNACTIRENVTMNTGTVGGGGV FT TRVGDRGFFMAASHVGHDCIVGNDVIFANAATLGGHCEIGDFTFIGGMTVLQQFTRVGP FT QVMIGGMSGLRTHVIPYALANGIYAKLAGLNIVGMRRRKFTKERLAIVRSFFNDLFYSS FT GPLAERLERVRPRTAEDPAIAEIVAFIDEIKGRGGRGQRVALCMAREGGAAVNDGDDA" FT misc_feature complement(150694..150759) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(151293..151748) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2912" FT /product="possible (3R)-hydroxymyristoyl-acyl carrier FT protein dehydratase" FT /function="InterPro IPR006683 COGs COG0764" FT /EC_number="4.2.1.-" FT /db_xref="GOA:P61454" FT /db_xref="InterPro:IPR010084" FT /db_xref="InterPro:IPR013114" FT /db_xref="UniProtKB/Swiss-Prot:P61454" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28353.1" FT /translation="MESPIRFENVDINTILKTLPHRFPFLLIDRVINIREDYSGIGIKN FT VTVNEPAFQGHFPERPVYPGVLMIEGMAQTAGVIGILSVTGTEKPRAVYFLTIDKCKFR FT KPVMPGDTVEYHLTRTGRRKTMWWFHGEAKVDGQIVAEADVGAMLAD" FT CDS complement(151748..152830) FT /codon_start=1 FT /transl_table=11 FT /gene="lpxD" FT /locus_tag="RPA2913" FT /product="UDP-3-o-[3-hydroxymyristoyl] glucosamine FT n-acyltransferase" FT /function="InterPro IPR001451 COGs COG1044" FT /EC_number="2.3.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Q9" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR007691" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR020573" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5Q9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28354.1" FT /translation="MASTSFFPPRPSSTLAEIASLTKATLVDASYAEHRITGLASLDEA FT GPMHLSFFENLRYSDELANTRAGACLVSERFEGRVPSHVAVLRARRPFHAFVAYARHLY FT SDALRPHTGVGAPGIAPTAVIHETAKLEDEVTVEPLAVIGPDVEIGSGTVIGAGAVIAA FT GVKIGRDCDIGAGSHLQHALIGNNVLMHPGCHIGQDGFGFIFAGQHTKVPQTGRVIIQH FT DVELGAGTTIDRGSLRDTVIGEGTKIDNQVQIGHNVTIGRHCVIAAKCGLAGSLTLGDN FT VALGAMVGINNHVVIGDGAQVAAMSGVKDSIPAGERWGGIFARPTRTWFREMLAVRRLA FT EGSGAETAARPDDDRDEGRG" FT CDS complement(152860..155385) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2914" FT /product="putative outer membrane protein" FT /function="InterPro IPR000184:IPR001484 COGs COG0729" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Q8" FT /db_xref="InterPro:IPR000184" FT /db_xref="InterPro:IPR010827" FT /db_xref="InterPro:IPR016474" FT /db_xref="UniProtKB/TrEMBL:Q6N5Q8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28355.1" FT /translation="MKVGMRVLRGVVGAALVFFAVPVATTAVGVVMASPAAAQSASSIA FT VEGNRRVEAETIRSYFKPGPGGRLDQGSIDDGLKALIETGLFQDVRINQAGGRLVVSVV FT ENPVIGRLAFEGNKKIKDEQLSAEIQSKPRGTLSRPMVQGDALRIAEIYRRSGRYDVRV FT DPQIIEQPNNRVDLVFVITEGPKTGVKSIEFVGNKAYSSYRLKDVIKTRESNLLSFLGN FT GDVYDPDRVEADRDLIRRFYLKHGFADVQVVAALTEYDPERKGFLVTFKIEEGQQYRVG FT SVTFESAIPTLDGNSMRSFSRVNVGSLYNAEALEKSVEEMQIELSRRGYAFATVRPRGD FT RNFDEHTVSIVFSIEEGPRVYIERINVVGNTRTRDYVIRREFDISEGDAYNRALVDRAE FT RRLKNLDFFKTVKITTEPGSSSDRVILVVNLEEKSTGDFSVSGGYSTSDGALGEVSVSE FT RNFLGRGIFAKASVQYGQYARGYSLSFVEPYLLDYRVALGLDLYQREQLANRYISYSTK FT TLGFSPRLGFALREDLSLQIRYSLYRQEITLPSYLNNCNNIPGPGFFPTPQYIAANNLQ FT ATYGVLGCYGDGEASLPVRIGLAGGAYWTSSLGYTLTYNTLDNIKNPTDGLLVDLRQDF FT AGVGGDVKFIKTAFDAKYYTSLVSDLVGLIHLQAGNLSTYGDNQLRMLDHFQMGSNLVR FT GFAPNGIGPRDIGQYALYGYGGDALGGTNYWGASVELQMPFWFLPKEVGLKGAVYADAG FT SLFDYKGPTSWSVTGEVNTPGCIPASQTTIGTCSGLNYDDTNLVRTSVGVGLIWASPFG FT PLRFDYAIPITKGKYDRVQEFKFGGGTSF" FT sig_peptide complement(155269..155385) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.861 atresidue 39" FT misc_feature complement(155299..155364) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(155558..156709) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2915" FT /product="Zinc metalloprotease" FT /function="InterPro IPR001193:IPR001478:IPR004387:IPR006025 FT COGs COG0750" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Q7" FT /db_xref="InterPro:IPR001478" FT /db_xref="InterPro:IPR004387" FT /db_xref="InterPro:IPR008915" FT /db_xref="UniProtKB/TrEMBL:Q6N5Q7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28356.1" FT /translation="MADLFLNSFHTLSHGLVGYVVPFLFVLTIVVFFHELGHFLVARWN FT GVKVLTFSIGFGPEIVGFNDRYGTRWKLSAVPLGGYVKFFGDDSEASTPSGDALSQMSA FT SERAVSFHHKPVGPRAAIVVAGPLANFILAVVLFTFLFSVFGVPNTSARVDGVQPGSAA FT EAAGFKPGDVVTSINGSAISNFLEMQRFVGAEAGNQLKFTVKRGDSTVDLVATPQLKEI FT KDRFGNVQRLGILGISRSTAAGEVTTEQVNPAVAFWMGIKETWFVVDRTFSYIGGIFTG FT REAADQLGGPLRIAQVSGQVATIGFTPLLHLAAVLSISIGLLNLFPVPLLDGGHLLFYG FT IEAARGRPLSERAQELGFRIGLALVLMLMMFATYNDILHLASS" FT misc_feature complement(order(155576..155641,155717..155782, FT 156278..156343,156521..156577,156599..156664)) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(156755..157978) FT /codon_start=1 FT /transl_table=11 FT /gene="dxr" FT /locus_tag="RPA2916" FT /product="1-deoxy-d-xylulose 5-phosphate reductoisomerase" FT /function="InterPro IPR003821 COGs COG0743" FT /EC_number="1.1.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Q6" FT /db_xref="InterPro:IPR003821" FT /db_xref="InterPro:IPR013512" FT /db_xref="InterPro:IPR013644" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5Q6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28357.1" FT /translation="MSPVPLKNAEPAHGGVRTVSVLGATGSIGDSTMDLIRAEPERYQV FT EALTGNANVAGLAKLAKEFSARFVAVADPARLGELRAALAGTDVACGAGESAVIEAAAR FT PADWVMAAISGAAGLKPALAAVDRGTTVALANKECLVCAGDFFMSRATAAGAQILPADS FT EHNALFQALASGNRHELTRVIITASGGPFRTWAAADIEQATLAQALKHPNWSMGQKITI FT DSASMMNKGLEVIEASYLFALSPDEIDVLVHPQSIVHGLVEFADRSVVAQLGAPDMRIP FT IAHCLGFPDRITGRAAKLDLAKIGQLTFEAPDFTRFPGLRLAYDALRTGNGATTVYNAA FT NEVAVAAFIAQKIRFGAIARLVEDTLNSWVRAGNQAPLGSADDAIALDQQARNLAATLL FT PQIAAKAS" FT CDS complement(157983..158831) FT /codon_start=1 FT /transl_table=11 FT /gene="cdsA" FT /locus_tag="RPA2917" FT /product="Phosphatidate cytidylyltransferase" FT /function="InterPro IPR000374 COGs COG0575" FT /EC_number="2.7.7.41" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Q5" FT /db_xref="InterPro:IPR000374" FT /db_xref="UniProtKB/TrEMBL:Q6N5Q5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28358.1" FT /translation="MSQDKAAPAPAAEQGSRNLILRIAAALVLAPGAIAIAYLGGWPWA FT VLATAVAVGLLLEWLSIVGLGRDWPIIGVGGLGLVVCGAALGAGVPWLAAAAIVIALAV FT LALLGGGQRRWATSGLGYAAAALVASILIRADPDYGFAALMMILLIVWVTDIGGYFAGR FT GIGGPKLWPRVSPKKTWAGAIGGFVLSLVIAAGFALLGVGKMAPLLVLAAILSTVSQLG FT DLFESAVKRRFGVKDSSHIIPGHGGLMDRLDGYVAAVVVAVLIGLTRGPLDGIGRGLMV FT W" FT misc_feature complement(order(158016..158066,158223..158288, FT 158349..158414,158427..158477,158499..158555, FT 158568..158618,158634..158699,158715..158771)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(158837..159595) FT /codon_start=1 FT /transl_table=11 FT /gene="uppS" FT /locus_tag="RPA2918" FT /product="undecaprenyl pyrophosphate synthetase" FT /function="InterPro IPR001441 COGs COG0020" FT /EC_number="2.5.1.31" FT /db_xref="GOA:Q6N5Q4" FT /db_xref="InterPro:IPR001441" FT /db_xref="InterPro:IPR018520" FT /db_xref="UniProtKB/TrEMBL:Q6N5Q4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28359.1" FT /translation="MSKAAAPLPDPSDPPSAPAHVAIIMDGNGRWAAARGLPRAEGHRR FT GVEALRRVVRASSELGIQYLTIFSFSSENWARPATEIVDLFGLLRRFIRNDLASLHRDG FT VRIRVIGERDRLDRDLCAMLDEAQELTRNNTKLNLVVAFNYGSRQEIANAAQRLAREVA FT EGKRDPATIDIETLGRYLDAPDIPDPDLIIRTSGEQRLSNFLMWQAAYSELVFVPIHWP FT DFDKAALEGAIAEYSRRERRFGGLAAKTGS" FT CDS complement(159807..160367) FT /codon_start=1 FT /transl_table=11 FT /gene="rrf" FT /locus_tag="RPA2919" FT /product="ribosome releasing factor" FT /function="InterPro IPR002661 COGs COG0233" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P61309" FT /db_xref="InterPro:IPR002661" FT /db_xref="InterPro:IPR015998" FT /db_xref="UniProtKB/Swiss-Prot:P61309" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28360.1" FT /translation="MSDKFDVNELKRRMQGAAQSLKHELGGLRTGRASASMLEPVQVDA FT YGSHMPLNQVATVSVPEPRLISVQVWDKSMVKAVEKGIVDSNLGLSPATEGQVIRLRIP FT ELNEERRKELVKVAHKYAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRLDQEVQK FT ATDAAIAEIDQLLANKEKEILTV" FT CDS complement(160433..161149) FT /codon_start=1 FT /transl_table=11 FT /gene="pyrH" FT /locus_tag="RPA2920" FT /product="uridylate kinase" FT /function="InterPro IPR001048 COGs COG0528" FT /EC_number="2.7.4.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Q3" FT /db_xref="HSSP:2BNE" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR011817" FT /db_xref="InterPro:IPR015963" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5Q3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28361.1" FT /translation="MAEPIYRRVLVKLSGEYFAGPQDYGIDQATIDRVAGELIAARSLG FT IEIAVVIGGGNIFRGVEVSARGVSRTTGDTMGMLATVMNCLALAEALQRHGQKARTLAA FT LMMPEVCELYTRAAAEQTLREGGIALLAAGTGNPYFTTDTAAVLRAAEIGAGAVLKATN FT VDGVYSADPKLDPNAKRFEKLTHSEALAGGYKVMDATAFALARETSLPIIVFSIAEPGS FT IGAVLSGAGRATVVAG" FT CDS complement(161217..162143) FT /codon_start=1 FT /transl_table=11 FT /gene="tsf" FT /locus_tag="RPA2921" FT /product="elongation factor Ts" FT /function="InterPro IPR000449:IPR001816 COGs COG0264" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P61338" FT /db_xref="InterPro:IPR000449" FT /db_xref="InterPro:IPR001816" FT /db_xref="InterPro:IPR009060" FT /db_xref="InterPro:IPR014039" FT /db_xref="InterPro:IPR018101" FT /db_xref="UniProtKB/Swiss-Prot:P61338" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28362.1" FT /translation="MATITAAMVKELRETTGVGMMDCKQALAETDGNIDAAIDWLRKKG FT LSKAAKKAGRVAAEGLIGALTDGTKGVVIEVNSETDFVARNEQFQGLVKMIAQVALKVG FT ADLDAINAAPVGSTTVAGAIADAIATIGENMTLRRAAALSVSQGVVASYIHNAVIDGAG FT KMGVIVALESAGKADELAVLGRQLAMHVAAANPQALDPTSLDPAVVQREREVMADKYRQ FT QGKPENMIEKIVENGLKTYYKEVCLLEQAYIHDEKGKSVAQAVKEAEGKVGAPIKIVGF FT VRYALGEGIEKQTSDFAAEVAAASGQK" FT CDS complement(162268..163263) FT /codon_start=1 FT /transl_table=11 FT /gene="rpsB" FT /locus_tag="RPA2922" FT /product="30S ribosomal protein S2" FT /function="InterPro IPR001865:IPR005706 COGs COG0052" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5Q2" FT /db_xref="InterPro:IPR001865" FT /db_xref="InterPro:IPR005706" FT /db_xref="InterPro:IPR018130" FT /db_xref="InterPro:IPR020589" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5Q2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28363.1" FT /translation="MSLPEFSMRQLLEAGVHFGHQSHRWNPKMADYIFGVRNNIHIVDL FT TQTVPLLHRALQAISDTVAKGGRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLT FT NWKTISGSIRRLRHLEDVLSSADANAYTKKERLELQRERDKLNRSLGGIKDMGGLPDLI FT FVIDTNKEDIAIQEAQRLGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLVARA FT VIDGISRAQGDVGIDIGAAAQPLREDLPAAQATTFQGLPGPRGTPDDLKKLPGVSGAIE FT KKFNDLGIFHFWQLAELDQATAHQIGEELGLPSRADAWVAQAKSLTAEAE" FT CDS complement(163498..165987) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2923" FT /product="conserved hypothetical protein" FT /function="InterPro IPR000694" FT /db_xref="GOA:Q6N5Q1" FT /db_xref="InterPro:IPR011600" FT /db_xref="UniProtKB/TrEMBL:Q6N5Q1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28364.1" FT /translation="MRLNHLFSVVSTILVVLIAGPVGPAAAQQQERRIALVIGNGAYAK FT APLSTAANDGGLIAQTLQAAGFDVSGARDLDGDTLRGAFRDFVKKAEDSGPDTVAAVYL FT AGYGVQYAGENYFIPVDSRLSRDTEIPTEGLRISDYLRQLAALPLKTSVVVLDLAREQP FT FVPGGSVASGLAMVEPNPKMLIAFNAAPGTVAPEERGAYGVYAQALAEMIRTGGLTLPQ FT LFDRVRLRVNETTKGAQVPWDTQSVESNFMFFDRAPDAPPLPAPDQALRSKPIRDMGAA FT EAYAAALDRDTLQAYEDFLAAYPNDPLAKRVRAIVAARREAITWRRTYRVDTPDAYWSY FT LRRYPRGPHAADARRRLEILAAALEPPPSFTVIDYDVPPPPPDEIVYVDRPVLMFSDPV FT FDFVPPPPPPVFFLPPPPPDFVVLPPPPPPIGLFYLPRPLFVPIPAYVRPPVYVQPPPN FT NIIFANIHNTTVINQVINQPPAAPANPAAPVVSPPVTGPAVATPGAPAPAVTAAAVASG FT AVLGAALPAAALHRATLIQQGKAPVPQSASIATTPPGGFEQRPGVQLQGPRLAQPAATP FT TQAPTTTAPVSAPTPAPGSPPSQPTGPAVAAPAGQGRPAPTAPAGAAPAVQALPVPGTK FT GLPPAPGVAARPGIPSVAQPQPPGRPALGPGGPAAARNGTVAPSAGSAPKPLAGTPPAG FT GGPAVRPEAVRPQQQAPAARLRPTPPVTAPARPAGPPPAAAVDRRPPPAAPRIQRPAPP FT TVSRPVPPPMHVAPRVAPPPPPQHAAPRMAPPPAPVRAAPPPPHVAPPRPPAPPRAAPP FT PRPQGPAKRCPPGAKEC" FT sig_peptide complement(165904..165987) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.973 atresidue 28" FT misc_feature complement(165907..165972) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(166149..169604) FT /codon_start=1 FT /transl_table=11 FT /gene="dnaE" FT /locus_tag="RPA2924" FT /product="DNA polymerase III alpha subunit" FT /function="InterPro IPR003141:IPR004013:IPR004805 COGs FT COG0587" FT /EC_number="2.7.7.7" FT /db_xref="GOA:Q6N5Q0" FT /db_xref="InterPro:IPR003141" FT /db_xref="InterPro:IPR004013" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR004805" FT /db_xref="InterPro:IPR011708" FT /db_xref="InterPro:IPR016195" FT /db_xref="UniProtKB/TrEMBL:Q6N5Q0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28365.1" FT /translation="MSNAGFVHLHVHSAYSLLKGSMKIAKLAELAKADRQPALALTDTD FT NMFGGLEFSDKLSGYGIQPIVGLELGIDFGDQDPNSRHGALATPARIVLLAAREQGYRS FT LMRLNSRAFLETPVNQVPHVKLEWLEGETDGVVALTGGPDGPISLAMLTDPALAAQRCE FT RLQQAFGDRLYVELQRHGTEAERRAEGGLIDLAYDKGLPLVATNEPHFASTEDYEAHDA FT LLCIASGKLIAETDRIQFTPDHRFKTRAEMAVLFADLPEALASTVEIAQRCAYRPLTRK FT PILPLFTVGASVSDAAEAAAAEAAELRRQAEQGLAKRLSVHGLSPGTTEEDYNKRLAFE FT LDVITRMKYAGYFLIVSDFIKWAKAHGIPVGPGRGSGAGSLVAYSLTITDLDPIRFGLL FT FERFLNPERVSMPDFDIDFCQDRRGEVIEYVQHRYGRDQVAQIITFGTLQARGVLRDVG FT RVLQMPYGQVDKLTKLVPQNPAAPITLKQAIEGEPKLQAARDEDPIVARAFDIAQKLEG FT LTRHASTHAAGIVIGDRPLSDLVPLYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTL FT TTLDVAVKLLKQRDIHVDLHTLPIDDAPSYQMLARGDVVGVFQVESAGMRRALIDMRPD FT RFEDIIALVALYRPGPMANIPTYCARKHGDEEPEYLHPMLEPILKETFGVIIYQEQVMQ FT IAQVMAGYSLGDADLLRRAMGKKIRAEMDKQRAIFVEGAVKNGVAKDAADTIFDLLAKF FT ADYGFNKSHAAAYALVSYHTAYMKAHYPVEFLAASMTLEIHNTDKLSEFRAEAQRLGIK FT VEAPSVNRSGATFEVGPNTIFYALAGLKGVGMQAVQQIVEARGDRPFTSLADFSARVNP FT RAINKRVIECLAAAGAFDCLDSNRARVFGGADAIVAACQRNHEAATSGQNDMFGGLSDA FT PSIILPQLEPWLPAERLRREYDAIGFFLSGHPLDDYATALKRLRVQSWAEFCKAVKSGA FT TAGKVAATVVSRMERRTKTGNKMGIIGLSDPTGHFEAVLFSEGLAQYREVLEPGAAVLM FT QLGAELQGEDVRARVLHAEPLDAAAAKTQKGLRIFLRDTKFLDSVVKRLQPPETKVAGG FT NIALVLRLDPQTEVEFDIPGRYHVSPQIAGAIKAVTGVEHVETL" FT CDS 170189..170698 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2925" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5P9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28366.1" FT /translation="MAQCATTSAATPRSSNAGPPPRASPPNVSPIHGISRRRDRVRAAP FT SGIEQAHVRPTLRRHRFLSHSRMRRVAATATGCSTRIRTKMRKLLLIAMLAGLGLTTTA FT EARDYPVCLRVYQSYHDWYDECSYDTMAQCRMSASGRSADCMTNPWYTAPQQQPTKKKR FT KHRRQQ" FT sig_peptide 170189..170242 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.861) with cleavage site probability FT 0.858 atresidue 18" FT CDS complement(170895..171593) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2926" FT /product="ATP-binding protein of ABC transporter, possibly FT involved in lipoprotein release" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1136" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5P8" FT /db_xref="HSSP:1F3O" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR015854" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5P8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28367.1" FT /translation="MEQGAEDIPVVYLHDIKRQYSQGEATLTILDGAKLALWAGQSVAL FT VAPSGSGKSTLLHIAGLLEHPDEGEVYVSGAATSALTDAERTQIRRTDIGFVYQSHRLL FT PEFTALENVMLPQMIRGLKRKETISRSKEILSYLGLADRITHRPSELSGGEQQRVAIAR FT AVANAPRVLFADEPTGNLDPHTADYVFNALMQLVKATQVAMLIATHNMELAARMDRRVS FT LQDGVVVELE" FT CDS complement(171605..172885) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2927" FT /product="possible ABC type permease; lipoprotein releasing FT factor" FT /function="InterPro IPR003838 COGs COG0577" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5P7" FT /db_xref="InterPro:IPR003838" FT /db_xref="InterPro:IPR011925" FT /db_xref="UniProtKB/TrEMBL:Q6N5P7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28368.1" FT /translation="MDHAMNDPVRTPPFAPFEWLISGRYLRARRREGFISVIAGFSFLG FT IMLGVATLIIVMAVMNGFRKELLDKILGLNGHLLVQPLESPLTDWKDVADRLSGVQGIK FT LAAPVVDGQALASSPFNASGVFVRGIRADDLNRLSSIANHLKQGTLEGFDDSQGVAIGR FT RLADQLSLHAGDSITLVAPRGAVTPMGTTPRIKPYKVAAVFEIGMSEYDSTFVFMPLKE FT AQAYFNRANDVTAIEVYTDNPDRIDVFRKAVTEAAGRPVFLVDWRQRNSTFFNALQVER FT NVMFLILTLIVLVAALNIISGLIMLVKDKGADIAILRTMGASQGSIMRVFLITGAAIGV FT VGTLTGFFVGVLVCMNIESIRQFLSWVTNTELFSPELYFLSKLPAEIDFAETSAVVIMA FT LTLSFLATLYPSWRAARLDPVDALRYE" FT misc_feature complement(order(171659..171724,171839..171904, FT 171965..172030,172718..172783)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(172965..174281) FT /codon_start=1 FT /transl_table=11 FT /gene="proS" FT /locus_tag="RPA2928" FT /product="proline-tRNA ligase" FT /function="InterPro FT IPR002314:IPR002316:IPR004154:IPR004500:IPR006195 COGs FT COG0442" FT /EC_number="6.1.1.15" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5P6" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002316" FT /db_xref="InterPro:IPR004154" FT /db_xref="InterPro:IPR004500" FT /db_xref="InterPro:IPR006195" FT /db_xref="PDB:2I4L" FT /db_xref="PDB:2I4M" FT /db_xref="PDB:2I4N" FT /db_xref="PDB:2I4O" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5P6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28369.1" FT /translation="MRLSRFFLPILKENPKEAEIVSHRLMLRAGMLRQEAAGIYAWLPL FT GHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKREL FT LYGPTNEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSF FT DVDEAGARKSYNKMFVAYLRTFARMGLKAIPMRAETGPIGGDLSHEFIVLAETGESGVY FT IDRDVLNLPVPDENVDYDGDLTPIIKQWTSVYAATEDVHEPARYESEVPEANRLNTRGI FT EVGQIFYFGTKYSDSMKANVTGPDGTDAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWP FT EAVAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGI FT PWQIHVGPRGLAEGKVELKRRSDGARENLALADVVARLT" FT CDS complement(174457..176037) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2929" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6N5P5" FT /db_xref="InterPro:IPR007348" FT /db_xref="InterPro:IPR008457" FT /db_xref="InterPro:IPR014755" FT /db_xref="InterPro:IPR014756" FT /db_xref="UniProtKB/TrEMBL:Q6N5P5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28370.1" FT /translation="MRSRGRWLAWITAIVVVLWPALAAAHASLVASDPASEAVLATSPT FT TFSLTFNEPVTALLLQLIDARGRSQAITAIDQDGATLRFAPPALLSEGAHVLSWRVISA FT DGHPIGGALTFWIGTPGQRLPPIVVPDDPVRRAAIWGTRITVDFTLLTAVGGAVFLGWI FT ATVPVAGMMTAGLALLGLAAVVLSAGLQGLDALDLPLARLGDAAVWRAGASGSFGDAAT FT LSGLALVLALAALRWRGWNARLLSLGAVVSLGTAFAVSGHAATAEPRSLSGAAVWVHGV FT SLALWIGALLPLAIAVGRRDAAPAPLRRFSKAIPLAIVALLISGIALAAIELGRIDALW FT QSDYGRVLIAKLALVVVLLALALWNRVRLTPLLLAGEATAVRRMRASIAAELVLVIAIL FT GVVGLWRFTPPPRSAVSQSTAPSEVVHLHTERAMATVTLAPARAGPVEIEVLLQTADEA FT LLAAQALTVTLANPAAGIEPLSAEARKTADGPWRARLTAPVPGTWTLTLGILISDFEKV FT NLEAPIVIR" FT misc_feature complement(order(174814..174879,174943..174996, FT 175042..175107,175144..175209,175240..175305, FT 175327..175392,175453..175518,175540..175605, FT 175951..176016)) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(175960..176037) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.250 atresidue 26" FT CDS complement(176055..176582) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2930" FT /product="conserved unknown protein" FT /function="InterPro IPR000104" FT /db_xref="InterPro:IPR012533" FT /db_xref="UniProtKB/TrEMBL:Q6N5P4" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28371.1" FT /translation="MRSRSVTAAAALTAAAFGAAPALAHVTLQPNEAVAGNYFQAALSV FT PHGCDGTATVAVRVKIPDGVLSVKPQMKPGWSVEIKTRKIEGEQPKLHGKTVTETVDEV FT TWRGGPLPDNLYDTFGLVMKLPDAAGKTLYFPVVQECEKGVSRWIEIPAAGQKSDALHE FT PAPTLRLKPKAP" FT sig_peptide complement(176508..176582) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.991 atresidue 25" FT CDS complement(176582..177121) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2931" FT /product="DUF461" FT /function="COGs COG2847" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR007410" FT /db_xref="UniProtKB/TrEMBL:Q6N5P3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28372.1" FT /translation="MKMFIRSVASVAVATLLSTAAVQAAEVKAGDLVISQSWSRATPGG FT AKVAGGFLTIENKGGSADRLVSGTADIAGKVEIHEMSMDNGVMKMRPLDKGLPIEPGKT FT VTLMPGSYHIMLMDLKGPLKQGDKVPMTLQFEKAGKVQVTLDVEGVGAKAPGDTGGSMM FT KMDHGTMDHSGHGMKK" FT sig_peptide complement(177047..177121) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.985 atresidue 25" FT CDS complement(177247..177663) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2932" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5P2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28373.1" FT /translation="MIIHPHKGLSALRRRLGRLIPLVAVVVLVQLLAPIGAVRFIANAI FT ADPVGVAPLCAEMARPGQASHAALPSGHDSGCCAICAVGLNGAPVPAPPPQDFVVARFA FT EEVVWHLAEPSAIDRRSFVDAQARGPPALVPVSA" FT misc_feature complement(177538..177603) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(178282..178563) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2933" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009935" FT /db_xref="UniProtKB/TrEMBL:Q6N5P1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28374.1" FT /translation="MVSTVAGLLAIYFVLWWIVLFVTLPFGVRSHAESEGEGATPGTDP FT GAPVATLLARKALWTTLISAVIFAIALYAYRSGWLGIDRLAKLMHLPL" FT misc_feature complement(order(178327..178392,178483..178548)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(178465..178563) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.606) with cleavage site probability FT 0.588 atresidue 33" FT CDS complement(178567..178971) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2934" FT /product="conserved unknown protein" FT /function="InterPro IPR001064 COGs COG0346" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR004360" FT /db_xref="InterPro:IPR017515" FT /db_xref="UniProtKB/TrEMBL:Q6N5P0" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28375.1" FT /translation="MLGRLNHVAIAVKDAVQAAKVYGAGFDAAISEAVPLPEHGVITVF FT VTLPNTKIEFIQPLGEASPIAKFLERNADGGIHHVCYEVPDIIEARDRLTKEGARVLGD FT GNPKIGAHGKPVLFFHPKDFSGALVEIEQA" FT CDS complement(179013..180683) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2935" FT /product="Beta-lactamase-like" FT /function="InterPro IPR001279 COGs COG0595" FT /db_xref="GOA:Q6N5N9" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR011108" FT /db_xref="UniProtKB/TrEMBL:Q6N5N9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28376.1" FT /translation="MARPDEFTFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFG FT DEEHLPGIDLIMPDVRFLEKEKKNLVGLVLTHAHEDHFGAIIDLWPKLGCPIYATKFSA FT SLFAAKLAAERTTLKIPITEVPSGGTIDLGPFSVEFIPVAHSIPESHALAIRTSVGTVL FT HTGDWKIDPTPVVGPPTDEARLRQLGDEGVLALIGDSTNAVRDGRSPSEAEVAVSLAGL FT IKSAKGRVAVTTFASNVGRIRAVADAAKAAGREVVLVGRAMDRVAQVARETGHLDGVQS FT FRGPEYYGHFPPDKVLALCTGSQGEPRAALARIAKDDHPEITLNKGDCVIFSSRTIPGN FT EKSVGSIINGLVTQGIDVITDRDHLVHVSGHPRRDELREMISWVRPQLLIPVHGEALHL FT NEHAKLARQMGVPKVMTCRNGNLIRLGPGDPAVIDQLPSGRLYKDGTILEQDTSRAVVE FT RRKMAFAGCAFVALALTETGELADDPEVDLVGMPENNTAGEPLEDIVFDAVVSTVEGLP FT RARRRDPDAVAESVRRTVRSIVQAEWGKKPLCTVHVLTV" FT CDS complement(180683..181489) FT /codon_start=1 FT /transl_table=11 FT /gene="birA" FT /locus_tag="RPA2936" FT /product="putative biotin-protein ligase birA" FT /function="InterPro IPR003142:IPR004143:IPR004408 COGs FT COG0340" FT /EC_number="6.3.4.15" FT /db_xref="GOA:Q6N5N8" FT /db_xref="InterPro:IPR003142" FT /db_xref="InterPro:IPR004143" FT /db_xref="InterPro:IPR004408" FT /db_xref="InterPro:IPR008988" FT /db_xref="UniProtKB/TrEMBL:Q6N5N8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28377.1" FT /translation="MTALHLGSKAAAAGYKLAAFDSTGSTNAEALASARAGEAGPMWFV FT TTEQTAGRGRRQRAWIAPRGNLASSVLEVMRVPPGTAATLGFAAGLALEAALQQVSLEA FT RARSGTDFGFRLKWPNDVLASGKKLAGILLEVENVGDRLAVVVGIGTNVIAAPTDTPYP FT AVSLHDLGISVTAEDLFAALSDAWTELLGIWDNGRGFPEIRRRWLERAAGLGEPVSIRS FT GDSALEGVFDSIDDTGCLIVRTTDGRRVPVSAGDVYFKGVASMGAA" FT CDS complement(181490..182929) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoN1" FT /locus_tag="RPA2937" FT /product="NADH-ubiquinone dehydrogenase chain N" FT /function="InterPro IPR001750 COGs COG1007" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N5N7" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR010096" FT /db_xref="UniProtKB/TrEMBL:Q6N5N7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28378.1" FT /translation="MNFETAGYPLLPILPELVLVVGAMLLLMLGAYRGPKATGTVTVLA FT ILLLLATGALELFALPAGKLVTFGGSFIVDDFARFLKVLALIGSAVTLILSLEVLTDPS FT RRMFEYAILVLLSSAGMLLLISAGDLIMLYLGLELMSLALYVVAASNRQDAKSNEAGMK FT YFVLGALSSGMLLYGASLIYGFTGTVQFSGIAAAAKDGNVGLVFGLVFLLAGLCFKVSA FT VPFHMWTPDVYEGAPTPVTAFFASAPKVAGIAIFTRVTLTAFPSIAPQWQQIVIFVAIA FT SMALGSFAAIGQKNIKRLMAYSAIANIGFALVGLSAGTVEGAQGVIVYISIYVAMTLGA FT FAVILAMRRNGMHVENISDFAGLSRTNPPLAFFFAMLLFSFAGIPPLAGFFAKFYVFMA FT AIKAGMFVLAVIGVVTSVVGAYYYLAIVKVMYFDEPAPGVDPVRPELRGVLMVAGLFNM FT LFFVYPAPLVNAATAAAKSLF" FT misc_feature complement(order(181526..181591,181652..181717, FT 181754..181819,181889..181954,181976..182026, FT 182057..182107,182144..182209,182255..182320, FT 182342..182407,182525..182590,182630..182695, FT 182741..182806,182834..182899)) FT /note="13 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(182949..184466) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoM1" FT /locus_tag="RPA2938" FT /product="NADH-ubiquinone dehydrogenase chain M" FT /function="InterPro IPR001750:IPR003918 COGs COG1008" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N5N6" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q6N5N6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28379.1" FT /translation="MSASIMTWPVLSVVTFLPVLGAALVYLARGEDEAARRNARWISLW FT TTLITFAVSLLLVWHFDPANPGFQFVEKAPWLGNTITYHMGLDGISLPLVILTTAIMPF FT CIIASWRSVTVRVREYMIAFLILETLMIGTFSALDLVLFYLFFEGGLIPMFLIIGIWGG FT PRRVYASFKFFLYTLLGSVLMLLAIMALYWNAGTTDIPTLMRTSVPSGLQTWAWLAFFA FT SFAVKMPMWPVHTWLPDAHVEAPTAGSVVLAAILLKMGGYGFLRFSLPMFPDASAYFAP FT LIYTLSVIAIIYTSLVALMQEDIKKLIAYSSVAHMGFVTMGIFAGTTQGVAGAVFQMVS FT HGIVSGALFLCVGVVYDRMHTREIAAYGGLVNRMPLYALVFMVFTMANVGLPGTSGFVG FT EFLTLLGTFRVNIPTATLATTGVILSAGYALWLYRKVVFGAMTKPALASIKDLTWREGL FT MMAPLLVLTILFGFYPKPVLDMSAASVQQLVNNYAAAVTAVKAAALP" FT misc_feature complement(order(183045..183110,183171..183227, FT 183273..183338,183399..183464,183480..183545, FT 183567..183632,183678..183734,183756..183821, FT 183882..183947,183975..184040,184053..184106, FT 184146..184211,184284..184349,184386..184451)) FT /note="14 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(184401..184466) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.785) with cleavage site probability FT 0.501 atresidue 22" FT CDS complement(184467..186560) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoL1" FT /locus_tag="RPA2939" FT /product="NADH-ubiquinone dehydrogenase chain L" FT /function="InterPro IPR001516:IPR001687:IPR001750:IPR003916 FT COGs COG1009" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N5N5" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003916" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR018393" FT /db_xref="UniProtKB/TrEMBL:Q6N5N5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28380.1" FT /translation="MIQAIVFLPLVGALIAAVIALVGAHARNPSGDTVEHHDDHGHGHD FT HAGHGHDAHAHAAHGHDDHAHDDHAHGPVEPAAAGSRLAEIVTTTLLLISCALSWVTLV FT EVGFMHHDSRVALLPWINSGELQVAWALRVDTLTAVMLVVVTTVSSLVHLYSIGYMHED FT PHRPRFFGYLSLFTFAMLMLVTADNLLQLFFGWEGVGLASYLLIGFWYQKPSANAAAIK FT AFVVNRVGDFGFLLGIFTIFVLVGSTDFDTIFSAAPGLTGKTINFFGWHADALTLACLM FT LFMGAMGKSAQFLLHTWLPDAMEGPTPVSALIHAATMVTAGVFMVARMSPLFELAPNAQ FT AVVMFFGATTAFFAATIGLVQNDIKRIVAYSTCSQLGYMFVAMGAGAYSVGMFHLFTHA FT FFKALLFLGAGSVIHAMHHEQDIRNMGGLKDRIPFTYGVMLIGTLALTGFPLTAGYFSK FT DAIIEAAFVSKNPLAFYGFLMTVVAALLTSFYSWRLVFKTFHGEPHDRKHYEAAHESPL FT VMTIPLFVLAFGALAAGYPFKELFAGHGIEEFFRSSLKMHPHIIEEMHHIPAWIALLPT FT VMMVVGFLVSWFFYIRRPDIPVELASQHRLLYQFLLNKWYFDELYEIIFVRPAKWIGRQ FT LWKKGDGLLIDGFGPDGISARVLDVTRGVVRMQTGYLYHYAFAMLIGVAGLITWFILGL FT GGR" FT misc_feature complement(order(184482..184547,184788..184853, FT 184950..185015,185079..185144,185190..185255, FT 185316..185381,185394..185459,185481..185537, FT 185568..185633,185697..185762,185823..185888, FT 185928..185993,186006..186056,186084..186149, FT 186234..186299,186483..186548)) FT /note="16 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(186480..186560) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.994) with cleavage site probability FT 0.940 atresidue 27" FT CDS complement(186620..186931) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoK1" FT /locus_tag="RPA2940" FT /product="NADH-ubiquinone dehydrogenase chain K" FT /function="InterPro IPR001133:IPR003214:IPR003215 COGs FT COG0713" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N5N4" FT /db_xref="InterPro:IPR001133" FT /db_xref="InterPro:IPR017863" FT /db_xref="UniProtKB/TrEMBL:Q6N5N4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28381.1" FT /translation="MNEIGLGHFLSVAAVLFTLGTLGIFLNRKNVIIILMSIELMLLAV FT NINLVAFSIYLNDIVGQVFALLVLTVAAAEAAIGLAVLVVFFRNRGTIAVQDINLMKG" FT misc_feature complement(order(186671..186736,186767..186832, FT 186854..186919)) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(186928..187566) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoJ1" FT /locus_tag="RPA2941" FT /product="NADH-ubiquinone dehydrogenase chain J" FT /function="InterPro IPR001457 COGs COG0839" FT /EC_number="1.6.5.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5N3" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:Q6N5N3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28382.1" FT /translation="MSMPVLFFYLYAGVAIAAAVMVVVARNPVHSALFLILVFVNAAGM FT FVLMGAEFLAMILIVVYVGAVAVLFLFVIMMLDVDYSQLREGFLEYLPFGLLIGFIFLA FT ELLLLAGGWVISPTVTKAVTSPIPTGVSNTEALGLVLYTRYIHYFQVSGMVLLVAMVGA FT IVLTLRHKKKVKRQDIAAQNARSKETAMAIRHVKTGQGLSDNDAGEWVR" FT misc_feature complement(order(187063..187128,187237..187302, FT 187342..187407,187423..187473,187495..187551)) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(187471..187566) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.889) with cleavage site probability FT 0.384 atresidue 32" FT CDS complement(187576..188064) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoI1" FT /locus_tag="RPA2942" FT /product="NADH-ubiquinone dehydrogenase chain I" FT /function="InterPro IPR000813:IPR001080:IPR001450 COGs FT COG1143" FT /EC_number="1.6.5.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5N2" FT /db_xref="HSSP:2FDN" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR010226" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5N2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28383.1" FT /translation="MNVTATARSLLLTEFVSAFFLAMRYFFKPKPTINYPFEKNPISPR FT FRGEHALRRYPNGEERCIACKLCEAVCPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIY FT CGFCQEACPVDAIVEGPNFEFATETREELYYDKARLLANGDRWEREIAKAISLDAPYR" FT misc_feature complement(187984..188034) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(188072..189097) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoH1" FT /locus_tag="RPA2943" FT /product="NADH-ubiquinone dehydrogenase chain H" FT /function="InterPro IPR001694 COGs COG1005" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N5N1" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5N1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28384.1" FT /translation="MAEFFATNLWPLLVVIGQSVLLLVILLIAIAYILLADRKIWAAVQ FT IRRGPNVVGPWGLLQSFADLLKFVLKEPTIPDGANKGLFLLAPLVTCVLALAAWAVIPV FT NAGWVIADINVGVLYILAVSSLSVYGIIMAGWSSNSKYPFLAALRSAAQMVSYEVSIGF FT VVICVLLCVGSLNLTAIVEAQDGKWGMLGWYWLPLFPMFVVFYVSALAETNRPPFDLVE FT AESELVAGFMVEYSSTPYLLFMLGEYVAIVTMCAMGTILFLGGWLPPVPYAPFTWVPGI FT VWFSLKLLFMFFLFAMAKAIVPRYRYDQLMRLGWKVFLPLSLAMVVIVASVLQFADLAP FT K" FT misc_feature complement(order(188090..188155,188192..188257, FT 188288..188353,188468..188524,188555..188620, FT 188681..188746,188792..188848,188993..189058)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(189107..191191) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoG1" FT /locus_tag="RPA2944" FT /product="NADH-ubiquinone dehydrogenase chain G" FT /function="InterPro IPR000283:IPR001041:IPR006656 COGs FT COG1034" FT /EC_number="1.6.5.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5N0" FT /db_xref="InterPro:IPR000283" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR006656" FT /db_xref="InterPro:IPR010228" FT /db_xref="InterPro:IPR015405" FT /db_xref="InterPro:IPR019574" FT /db_xref="UniProtKB/TrEMBL:Q6N5N0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28385.1" FT /translation="MTAMIKIIVDGKEVEVPPEYTLLQACESAGAEIPRFCYHERLSIA FT GNCRMCLVELKGTPKPVASCAWGVRDCRPGPNGEPPEISTKSPMVKKAREGVMEFLLIN FT HPLDCPICDQGGECDLQDQAMGYGVDQSRFAENKRAVEDKYLGVLVKTSMTRCIQCTRC FT VRFAAEICGVPEMGAIGRGEDMEITTYLERALTSELQGNLVDICPVGALTSKPYAFAAR FT PWELGKTQSVDVMDGVGSAIRVDTRGREVMRILPRVNEAINEEWISDKTRHVVDGLRTQ FT RLDRPYVREGGKLKPASWQQAFAAIKAKLDGTSAKKIGAIAGDLAAVEEMFALKQLLAK FT LGSTNVAAQNVAAFDPKAGRASYIFNPGIVGIEQADAVLIIGSDPRKEAAILNARIRKR FT WRASGMPIGVIGDQAELTYHYDYLGAGTDTLNDLIAGKLGFAETLKNAKRPIILVGAAA FT TARRDGAAILSLAAKLAADVGALDDGWNGFAVLHPAASSVGALDIGFVPGAGGLGAAEM FT ATAGGVDVLFSLGADEVKLPDGAFVVYIGTHGDRGAHRADVILPGAAYTEKSGIYVNTE FT GRVQIAGRASFPPGDAREDWAILRALSEALGAKLPYDSLAALRKALFAEVPHLMRVDQI FT EAGNPADLRKLASAGGSVEKTPFKPVIADFYMTNPIARASAVMAECSRLASGQLLTAAE FT " FT CDS complement(191188..192513) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoF1" FT /locus_tag="RPA2945" FT /product="NADH-ubiquinone dehydrogenase chain F" FT /function="InterPro IPR001949 COGs COG1894" FT /EC_number="1.6.5.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5M9" FT /db_xref="InterPro:IPR001949" FT /db_xref="InterPro:IPR011537" FT /db_xref="InterPro:IPR011538" FT /db_xref="InterPro:IPR019554" FT /db_xref="InterPro:IPR019575" FT /db_xref="UniProtKB/TrEMBL:Q6N5M9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28386.1" FT /translation="MLDDKDRIFRNLYGLDDWTLKGARRRGGWEGTKAIIDKGRDWIIN FT EMKASGLRGRGGAGFPTGLKWSFMPKDNADGRPSYLVVNADESEPGTCKDREIMRHDPH FT TLVEGCLLAGCAMGAHTGYIYVRGEFIRERERLQAAIDQAYEAKLIGKDNVHGYPFDLY FT VAHGAGAYICGEETALLESLEGKKGQPRLKPPFPANVGLFGCPTTVNNVESIAVAPDIL FT RRGAAWFSSIGRANNVGTKLYGISGHVNTPCVVEEAMSIPFRELIEKHGGGIRGGWDNL FT LAIIPGGASCPLIPAADCEELIMDFDGTRAVKSSFGTAGVIVMDKSTDVVAAIARISYF FT FKHESCGQCTPCREGTGWMWRVLDRMVEGRAHKREIDMLLEVTKQVEGHTICALGDAAA FT WPIQGLIRAFRPEIERRIDDFSRKATLDDQGVLDPAHMQAAE" FT CDS complement(192532..192747) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2946" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5M8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28387.1" FT /translation="MTTIAPAGRAVAESARAMPTPVYILLHGIAAAAFIFLLQRYALGA FT TLQSSVIWALTFGGCAIGLAYMQSKR" FT misc_feature complement(order(192550..192606,192619..192684)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(192744..193493) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoE1" FT /locus_tag="RPA2947" FT /product="NADH-ubiquinone dehydrogenase chain E" FT /function="InterPro IPR002023 COGs COG1905" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5M7" FT /db_xref="InterPro:IPR002023" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:Q6N5M7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28388.1" FT /translation="MSVRRLAPKELQPESFAFTAENLAWAQKEITKYPPGRQFSAVIAI FT MWRAQEQCGGWLPEAAIRTVADMLQMPHIRALEVATFYTMFQLNPVGKKAHVQVCGTTP FT CRLRGAGELIEVCKNRIHHDPFHLSADGDFSWEEVECAGACVNAPMVQIWKDTYEDLTP FT ETLNKVLDGFASGNPPTPGPQNGRQHAAPMTGPTTLKSGGINVSPVDSNGPALTDNDAK FT RAGAAANVQERPAPKPPAADATEKNPP" FT CDS complement(193496..194467) FT /codon_start=1 FT /transl_table=11 FT /gene="fkbM" FT /locus_tag="RPA2948" FT /product="possible methyltransferase, FkbM family" FT /function="InterPro IPR006342 COGs COG0500" FT /db_xref="GOA:Q6N5M6" FT /db_xref="InterPro:IPR006342" FT /db_xref="UniProtKB/TrEMBL:Q6N5M6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28389.1" FT /translation="MNVPEPIQFDRATGALEGAGALERAAACALVMGARVSSTFSYRGY FT NAAANLMRKALPERDIAIKLNPDATFVFPYGDGYWSKLLQRDYDYEIELDLLFRDAADV FT DYTLIDCGANYGYWSVLVSSAPFGAHRTLAIEPSSQNFARLTHNARVNGNRFSVMKCAV FT GAARGTAKLSGTKHEAFSIAGKPGADGEDVPVIRLDDLIDDGHLPLGGKYIVKLDVEGV FT EIDAIRGGERLLAEDTAILCEEHGSDRDHKVSRYILEHTPLKLVVYDPQSNRYEAVVDL FT GILDRIKVASNVGYNVVGTASAFWQARIQHLNASVAQRSARN" FT CDS complement(194464..195672) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoD" FT /locus_tag="RPA2949" FT /product="NADH-ubiquinone dehydrogenase chain D" FT /function="InterPro IPR000070:IPR001135 COGs COG0649" FT /EC_number="1.6.5.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5M5" FT /db_xref="HSSP:2FUG" FT /db_xref="InterPro:IPR001135" FT /db_xref="InterPro:IPR010219" FT /db_xref="InterPro:IPR014029" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5M5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28390.1" FT /translation="MADAAAPDAASVRNFTINFGPQHPAAHGVLRLVLELDGEVVERVD FT PHIGLLHRGTEKLIEQKTYLQAIPYFDRLDYVAPMNQEHAFCLAVEKLLGIAVPRRAQL FT IRVLYAEIGRILSHLLNVTTQAMDVGALTPPLWGFEEREKLMMFYERASGSRMHAAYFR FT VGGVHQDLPPKLVDDIDAWCDAFPAVVNDLDRLLSDNRIFKQRNVDIGVVTLDQAWSWG FT FSGVMVRGSGAAWDLRKSQPYECYAELDFEVPIGKNGDCYDRYHIRMEEMRQSVRIMKQ FT CIAKLRAPHGQGPVVVDDHKIFPPRRGEMKRSMEALIHHFKLYTEGFHVPAGEVYVAVE FT APKGEFGVYLVSDGSNKPYKCKIRAPGFAHLQAMDFLSRGHLLADVSAILGSLDIVFGE FT VDR" FT CDS complement(195724..196338) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoC" FT /locus_tag="RPA2950" FT /product="NADH-ubiquinone dehydrogenase chain C" FT /function="InterPro IPR001268 COGs COG0852" FT /EC_number="1.6.5.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5M4" FT /db_xref="InterPro:IPR001268" FT /db_xref="InterPro:IPR010218" FT /db_xref="InterPro:IPR020396" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5M4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28391.1" FT /translation="MDDNGLDTLGQTIVGALPGIATGHSVGFGQLTLTVDAGKIVEVMR FT LLRDDPRFRFISFIDMTAVDYPGRAERFEIVYHLLSPKLNERVRVKAEVGETTLVPSII FT EVFPGADWFEREAYDLYGIVITGHPDMRRLLTDYGFDGHPLRKDFPLTGFVEVRYDDDQ FT KRVIYEPVRLNQEFRKFDFLSPWEGADYPVLPGDEKAGVKS" FT CDS complement(196352..196948) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoB1" FT /locus_tag="RPA2951" FT /product="NADH-ubiquinone dehydrogenase chain B" FT /function="InterPro IPR006137:IPR006138 COGs COG0377" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N5M3" FT /db_xref="HSSP:2FUG" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR006138" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5M3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28392.1" FT /translation="MQPTPSQHPVGAQPLIARPATGIIDPNTGRPVGADDPFFLNVNRE FT LSDKGFFVAATDDLITWARTGSLMWMTFGLACCAVEMMQLSMPRYDAERFGFAPRASPR FT QSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIV FT PIDIYVPGCPPTAEALLYGVMLLQKKIRRTGTIER" FT CDS complement(196960..197325) FT /codon_start=1 FT /transl_table=11 FT /gene="nuoA1" FT /locus_tag="RPA2952" FT /product="NADH-ubiquinone dehydrogenase chain A" FT /function="InterPro IPR000440 COGs COG0838" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N5M2" FT /db_xref="InterPro:IPR000440" FT /db_xref="UniProtKB/TrEMBL:Q6N5M2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28393.1" FT /translation="MSGILSNYLPIVVFIIVAAGLSFVLLVAPFAVAYQQPDPEKLSAY FT ECGFNAFSDARMKFDVRFYLVAILFIIFDLEVAFLFPWAVAFGKLGATGFWSMMVFLGV FT LTVGFAYEWKKGALEWD" FT misc_feature complement(order(196993..197049,197065..197130, FT 197230..197295)) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(197224..197325) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.981 atresidue 34" FT tRNA complement(198313..198389) FT /gene="tRNA-Asp1" FT /locus_tag="RNA_28" FT /product="tRNA_Asp" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 198640..198951 FT /codon_start=1 FT /transl_table=11 FT /gene="hupA" FT /locus_tag="RPA2953" FT /product="possible DNA-binding protein hu-alpha (NS2) FT (HU-2)" FT /function="InterPro IPR000119 COGs COG0776" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5M1" FT /db_xref="InterPro:IPR000119" FT /db_xref="InterPro:IPR010992" FT /db_xref="UniProtKB/TrEMBL:Q6N5M1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28394.1" FT /translation="MAKKAVAKSATPATVTLKHLAAALAEEHELSKKQTEAILGDMVTR FT ITKHLKKGERIRIVGLGILQVRKRAARMGRNPATGEQIQIKASKKVAFRAAKELKEAI" FT terminator 199083..199113 FT /note="TransTerm prediction, 98+%" FT CDS 199203..200501 FT /codon_start=1 FT /transl_table=11 FT /gene="pepT" FT /locus_tag="RPA2954" FT /product="putative peptidase T (aminotripeptidase) FT (tripeptidase)" FT /function="InterPro IPR001261:IPR002933 COGs COG2195" FT /EC_number="3.4.11.-" FT /db_xref="GOA:Q6N5M0" FT /db_xref="InterPro:IPR001261" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR010161" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q6N5M0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28395.1" FT /translation="MVPSLGAASLQGSSDVTAINFDFTVLERFLRYVTIDTQSDPHSES FT CPSTEKQKDLGALLAQELRELGLADAHLDQHGYVYATIPTTTAKQNVPVICFCAHMDTS FT PDCSGAGVKPQVWKDYQGGDIVLPGDKSQVIRRAEHPALSNQIGHDIVTSDGTTLLGAD FT NKAGVAEIMDAARFLLAHPEIKHGTLKILFTPDEEIGRGVDKVDLAKLGADFAFTMDGE FT SAGHIEDETFSADSAVITIEGVSAHPGFAKGKIEHAIKIAAAIIERLPKTGCSPETTEG FT REGFLHPIGITGTLEKASVSFIVRDFTEAGLKDKETLLQSIVEEVMLDYPRSRAKIEIQ FT PQYRNMKQVLDRHPELVENAREAIRRAGLTPVTAAIRGGTDGARLSFMGLPCPNVFAGE FT HAFHSRLEWVSRQDMEKAVETIVHLATIFEEQA" FT CDS 200651..201895 FT /codon_start=1 FT /transl_table=11 FT /gene="mex" FT /locus_tag="RPA2955" FT /product="possible RND efflux membrane fusion protein FT precursor" FT /function="InterPro IPR001687:IPR006143 COGs COG0845" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5L9" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q6N5L9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28396.1" FT /translation="MICARLASLASARRIGIVALIAGAPIILTGCKEQNKYAAPPPAKV FT TVAKPTQAPVTLYAEFTGNTSPVASVDLEARVQGFLESVDYLDGEAVKKDRELFKIEKA FT QYQAQVDLQQAQLDGAKAKQANAQREADRQTILGQRDVASQRNVDDAQTNLAAANAQVA FT AAQASLALAKTSLGYTTVTAPFDGVVTRRLVNVGTLVGSAGPTKLATILQVDPLYVYFN FT ITEQQQINLRDALAKRGKTLKDMREERLEMPIQVALASDTSFQYAGKIDYIAPQVDPST FT GTLQLRGTLPNKDVALVPGLFVRVRVAVGQLDDALLINDTAVMSNQTGSYVMVVGAGDV FT VEQRQVTLGPQEGQLRVVTSGLKADDRVVIGAIQRAIAGNTVTPVAGTMAAAPTAPTPA FT PAALSPGAQSGTAKP" FT CDS 201924..205064 FT /codon_start=1 FT /transl_table=11 FT /gene="mexF" FT /locus_tag="RPA2956" FT /product="putative RND multidrug efflux transporter MexF" FT /function="InterPro IPR001036:IPR004764 COGs COG0841" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5L8" FT /db_xref="InterPro:IPR001036" FT /db_xref="InterPro:IPR004764" FT /db_xref="UniProtKB/TrEMBL:Q6N5L8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28397.1" FT /translation="MFSRFFIERPVLSNTLAFLIVLLGALALMRLPVSQYPDVVPPTVS FT VSATYPGASARTVMDSVALPIEQQVNGVEGMIYMQSTSASDGSYNLVVTFDIGTDPNMA FT QVLVQNRVSLASAQLPTSVSTQGLNIKKKSTAILQFVSLVSSDGRYDNLFLANYAKINI FT QNELARLPGVGDVSVLGSGSYAMRIWLDPDKLQSYGLTPSDVISAVQQQSNQVTAGLVG FT GPPAPSIVNFQYALDVVGRFNEATDFEKIVVKAVDQGGGQLVRIGDIGRVELGASSYGQ FT NATLDGKPSAAIAISLLTGANALSVAEAVNAKMKEMAGSFPAGLDYKVSFDSTKFITAS FT VDEVYETLIIAAVLVLVVILMFLQDWRAMLVPATTVPVTIIGAFAAMSAMGFTVNTTSL FT FALVLAIGIVVDDAIVIVEGVSRHIAGGMSSREAAVKAMSELFGPIIGITLVLMAVFLP FT AAALPGLTGKMYQQFALVIAATALISAVNAVTLKPTQCALWLRAPVPPEQRGIVYRVFN FT AVYARCEAVYAALIRRLVAFSIPTTIVGLALVGVAFYGLSRVPTAFLPSEDQGYFIISL FT KLPDAASAGRSDAAVAKAVELVRKTPGVESVIGVSGISPLDNNATMYNAGMLYVVLHDW FT DQRKTKDLSIDAIAAKVRAALAQLDTATALVLMPPPIQGIGNTSGFTMMVEMKNGSSDF FT LALQNATEQLAANASTQSGITHAASTFKGNVKQLRLVVDRMKAETLGVTVGQVFSAVES FT YLGSTYVNQFTKFNNVFQVYVQADAPFRLRPDDVLKLKVKGSGGQMVPVGAVAYLTDEV FT GPPLITLYNLYPAATLVGSPAAGFSSGEAMSLMSEVAAKSLPASMGTAWTGMSYQEQVV FT GDQIYYVFAVALLLVYFVLAGQYESWLQPLAVILAVPLTLLGTVAALEWSGLPNDLYTQ FT IGIVLLIALAAKNAILIVEYAREKCMEGMPIAEAAVEAARLRFRPILMTSFAFIFGMLP FT LALATGAGAGARVSLGIAVVAGMLASTGLAVLFVPAFFAVLQRLGTRRQAAASPAEG" FT sig_peptide 201924..202031 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.979) with cleavage site probability FT 0.761 atresidue 36" FT misc_feature order(201936..202004,202953..203012,203031..203090, FT 203118..203186,203247..203315,203328..203396, FT 203523..203591,204543..204596,204609..204677, FT 204705..204773,204834..204902,204945..205013) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT tRNA 205157..205233 FT /gene="tRNA-Val2" FT /locus_tag="RNA_18" FT /product="tRNA_Val" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 205563..208211 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2957" FT /product="putative diguanylate cyclase FT (GGDEF)/phosphodiesterase (EAL)" FT /function="InterPro IPR000160:IPR001633 COGs COG2200" FT /db_xref="GOA:Q6N5L7" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q6N5L7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28398.1" FT /translation="MARVGWNARARSLLRGPGNASVRWIVGIGVLLIAAISIVTAWMIA FT DGRERVLRNAGRELGNTALLLARQFDRTFDTLNADQSDTASSLEQTFPLAKALSTHTLL FT ALKAGELGDFDLFDTSGALINSSRGWPLPNVEIGAHPNFKRWMADYERDEAEAEFIRDP FT VLGGLTLTLIKRLRGPTRATTGVLTRTIPNTWYENLASSIVLGEDASIAIFTSGGTLVT FT RWPRFTQANGQNFLDSELKPLFLQPSITRRVNSPFDGRERLAAARMLTKQPVFVVVSRS FT VNGVLSSWWRELWVMVAVACASALAVAVVLFQLGRQILRQETDLRKRYSIAVDNMAQGL FT SLFDSTGRLLLFNQRYLDLYGLPAGALKPGMRTFEIVRQLQQAGHDPHLLESYRAFALK FT HAGARSAFEVEFPDGRTILITREPIPGGGWVTTDEEITERKRSDSRIHHLAHYDDLTGL FT PNRSSFRKHLGEALNLIEPGDQLALLYIDIDEFKIVNDTLGHPVGDQLLQALADRLRNC FT VGPDDYVARLGGDEFAVVMADASDIREFVAKLQATLRDSIDCAGQVLSPDASIGIALAP FT DHSCEVDDLIAKADLALYAAKAEGRRTYRYFMPEMDVKAKARHELATELKRAVTEHDFR FT LHFQPLVDLNSGTIAGCEALLRWQHPVRGFVSPAEFIPLAEDIGLIEDLGEWVLDQACR FT VAVGWPASMTVAVNVSPIQFRRATFPLKVAAALARTGLAAHRLELEITEALLLQDNEST FT LAILNQLRDLGVKIALDDFGTGYSSLSYLHRFPIDKIKIDKSFVDTLTEEAGSATIVRA FT IVQIAAAGNKTTLAEGVETAAQRDLLRHLGCQQMQGYLFSPALPEDALARLIGNTDAET FT QTAPRRAPASV" FT misc_feature 205623..205691 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(208320..209360) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2958" FT /product="putative DNA-binding protein" FT /db_xref="GOA:Q6N5L6" FT /db_xref="InterPro:IPR011204" FT /db_xref="UniProtKB/TrEMBL:Q6N5L6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28399.1" FT /translation="MSAASSRGELVLYRTEDGRDAIQLRVVDGTVWLTQAEIAALFETT FT SQNVNQHLGTIFDDRELDEAATCKDFLQVQQEGARSVRRTLKIYNLDAILAVGYRVRSP FT RGSQFRRWASTVLREYLTKGFVLDDARLKEPGGLDYFDELLLRIRDIRASEKRFYQKVR FT DLFAATSVDYDGCADTAKAFFATIQNKLVFAVTGQTAAELIVARADPERPNMALTSWVG FT ERVRKTDVTISKNYLTTEEIDSLNRLTTMFLDFAEDRASRRQETRMADWITQTDRFLSF FT NEREVLQGKGRMSHERMTEIAHARFDAFDADRRAAEAIAAEREAAEDLVKLEAEARRLT FT QRKPET" FT CDS complement(209555..211987) FT /codon_start=1 FT /transl_table=11 FT /gene="lon" FT /locus_tag="RPA2959" FT /product="ATP-dependent protease Lon" FT /function="InterPro FT IPR001687:IPR001984:IPR003111:IPR003593:IPR003959:IPR004815 FT COGs COG0466" FT /EC_number="3.4.21.53" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5L5" FT /db_xref="InterPro:IPR001984" FT /db_xref="InterPro:IPR003111" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR004815" FT /db_xref="InterPro:IPR008268" FT /db_xref="InterPro:IPR008269" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q6N5L5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28400.1" FT /translation="MTATKPRPSITYGESHSYPVLPLRDIVVFPHMIVPLFVGREKSIR FT ALEEVMKNDALIMLATQKNASDDDPAPDAIYEIGTLASVLQLLKLPDGTVKVLVEGLAR FT AKVDKYTDRADYYEADAVALEDSDATSVEAEALGRSVVSDFESYVKLNKKISAEVVGVV FT QSITDFAKLADTVASHLAVKIADRQGILETLSVTQRLEKVLGLMESEISVLQVEKRIRS FT RVKRQMEKTQREYYLNEQMKAIQKELGDEDGRDELAELEEKIAKTKLSKEAREKAQHEL FT KKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSKVKKDLEAAQAVLDSDHYGLEKVKERI FT VEYLAVQSRANKLSGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG FT HRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTF FT NDHYLEVDYDLSNVMFITTANTLNIPGPLMDRMEIIRIAGYTETEKVEIARKHLIPLAL FT TKHGLEPKEWSIDDNALLLVIRRYTREAGVRNLEREISTLARKVVKDLMLSKKKSVHID FT EKQIEEYLGVPKFRFGEIEKDDQVGVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNL FT RDVMKESIQAAASYVRSRAITFGIEPPFFEKRDIHVHVPEGATPKDGPSAGVAMATTIV FT SVLTGIPIRRDIAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEIS FT DAIKGGLNIIPVARMDEVIANALTRAPVPIVWEEETKLPGTPDSAEADEAGGGLTAH" FT CDS complement(212297..213571) FT /codon_start=1 FT /transl_table=11 FT /gene="clpX" FT /locus_tag="RPA2960" FT /product="ATP-dependent Clp protease ATP binding subunit FT ClpX" FT /function="InterPro IPR001687:IPR003593:IPR003959:IPR004487 FT COGs COG1219" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5L4" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004487" FT /db_xref="InterPro:IPR010603" FT /db_xref="InterPro:IPR013093" FT /db_xref="InterPro:IPR019489" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5L4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28401.1" FT /translation="MSKVGTSDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCM FT DIIREENKSSLVKSRDGIPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQTKH FT NDVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK FT LLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP FT PQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG FT EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLFEM FT ENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLEGVEEVVISREV FT VDGTARPLYIYADRTDRAAETSASA" FT CDS complement(213964..214602) FT /codon_start=1 FT /transl_table=11 FT /gene="clpP" FT /locus_tag="RPA2961" FT /product="ATP-dependent Clp protease proteolytic subunit" FT /function="InterPro IPR001907 COGs COG0740" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5L3" FT /db_xref="InterPro:IPR001907" FT /db_xref="InterPro:IPR018215" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5L3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28402.1" FT /translation="MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVE FT DGMSTLIVAQLLFLEAENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQA FT ASMGSLLLAAGHKDMRFSLPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYV FT HHTGQTYKAIEDALERDKFLTAEMAREFGIVDKVIEKRPEDPAPAPKAA" FT terminator complement(214653..214663) FT /note="TransTerm prediction, 98+%" FT terminator complement(214861..214889) FT /note="TransTerm prediction, 98+%" FT CDS complement(214916..216274) FT /codon_start=1 FT /transl_table=11 FT /gene="tig" FT /locus_tag="RPA2962" FT /product="putative trigger factor" FT /function="InterPro IPR001179:IPR005215 COGs COG0544" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5L2" FT /db_xref="InterPro:IPR001179" FT /db_xref="InterPro:IPR005215" FT /db_xref="InterPro:IPR008880" FT /db_xref="InterPro:IPR008881" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5L2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28403.1" FT /translation="MQVKETVADGLKREFQVNVPAADIDAKIDEKLADLKDKVRLNGFR FT PGKVPTAHLKRVYGRSVAAETIDKLVRDTNDGIFSERGFRLATEPKITMPQDQKEIEDI FT LEGKSDLTYTVAIEVVPAIELADFKSFSVEKPVVDVADSDVDEAIKRIADANRAYADKA FT EGAKAETGDRVTVSFKGTIDGVAFDGGTGEDIPVVIGSASFIPGFEDQLVGIAVGETRT FT IKVTFPANYASETLAGKPAEFETTATKLEAPQETTIDDEFAKTLGLESLDKLKEAAKAR FT LAAEYAGASRLKVKRQLLDRLDEAHKFDAPPSLIEQEFEVMWRSINAEMQSTGKTFADE FT NTTEDAAKEEYRKIADRRVRLGLVLSEIGEKNKIQVTDDEVSRAVIERARQMPGREKEV FT WDFYRSNPEALAQLRAPIYEDKVVDFILELANVTEKKVTREELYKDEDDKTAA" FT tRNA complement(216422..216506) FT /gene="tRNA-Leu4" FT /locus_tag="RNA_27" FT /product="tRNA_Leu" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(216665..217138) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2963" FT /product="hypothetical protein" FT /db_xref="GOA:Q6N5L1" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q6N5L1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28404.1" FT /translation="MRTMFAGRCPAVCDNVMLEAPEIRPVRLSSHFLYDEAAFSIMTTT FT EDTGWLERLSLILDAFREIHPEITANQILVLLQIGGKPGITQRELSDRTGLKDGTISRI FT CALMSERGHQDRAGLSIVDIRGVPGDYRLKGQYLVGRGNDLYARVQSLMTAGG" FT CDS 217261..218466 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2964" FT /product="Multicopper oxidase, type 1" FT /function="InterPro IPR001117" FT /db_xref="GOA:Q6N5L0" FT /db_xref="InterPro:IPR001117" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011706" FT /db_xref="UniProtKB/TrEMBL:Q6N5L0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28405.1" FT /translation="MLRAAMGSAVLKPGAAAVARPILSLEGPPLMRGDEVAVQFDNKLA FT EPALLTLRGLGGAGAAEPLVKMQSVPPSGSDSFLLTLRSAGTLLADLRLAADAGPAPMP FT ALPLIVTEPELPQADGDQVVLIEDYRLDDDGKPRPAGVDTGATPWIYTVNGKPSAEFAV FT RTNGRFRFRFINACQRNVIALKIEDHNVWVMALDSQPAEPFLARGGALVIAPGGRVDAL FT IDTPKAAGSRAAITLHDGGKPTELGKLVYGGDPPLRPAPLPQPEPFPAAGLPTQLPLGG FT ALRAELLLGALVNAQLDWFAPDKFNPAAGPAFQVKRGRTVVLALTNHATMPMVFHLHGH FT HFRLLDRLDDGWKPFWLDTLAIDAGQTQRIAFAAEYPGLWLIESYAAKWSEPRLVRSYL FT VT" FT sig_peptide 217261..217320 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.663) with cleavage site probability FT 0.389 atresidue 20" FT CDS complement(218515..220014) FT /codon_start=1 FT /transl_table=11 FT /gene="yjeF" FT /locus_tag="RPA2965" FT /product="Protein of unknown function UPF0031:YjeF-related FT protein, N-terminal" FT /function="InterPro IPR000631:IPR004443 COGs COG0063" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR000631" FT /db_xref="InterPro:IPR004443" FT /db_xref="InterPro:IPR017953" FT /db_xref="UniProtKB/TrEMBL:Q6N5K9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28406.1" FT /translation="MELLTPAEMDRADLLTIAGGSSGFALMLHAGRHVAQAAIEMADEG FT PILVIAGPGNNGGDGLIAATELVALGRTVHVMLLGEREALKGDAALAAREWRGPLLPFL FT TQSIGAPALIIDALFGSGLNRPVKDQALKVIEAVNHSGVPVLAVDLPSGINGATGAVMG FT AAIRARETVTFFRRKIGHLLLPGRLHCGQVRLVDIGIEPGVLGEIRPQAFENDPDLWLP FT DFPVPRADGHKYGRGHAVVVSGELSQTGAARLAARGALRAGAGLVTVASPRDALAVNAA FT ALTAVMVRPVDTPDELGTMLADRRFNAIGIGPGAGIGEETRGKVLAALAAGAAVVLDAD FT ALTSFAGHPDELFEAIKSASSPQVVLTPHEGEFPRLFSDMSNKNPLRSKLERVRVAAQR FT SGAVVLLKGADTVVASPDGRAAIAANAPPWLATAGSGDVLTGIITGLLAQRVPAFEAAC FT IGVWMHGEAACEAGPGLIAEDLTETMPAVHRRLYGALGIEY" FT CDS 220426..220764 FT /codon_start=1 FT /transl_table=11 FT /gene="glnB" FT /locus_tag="RPA2966" FT /product="nitrogen regulatory protein P-II" FT /function="InterPro IPR002187:IPR002332 COGs COG0347" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q8GMJ2" FT /db_xref="HSSP:1HWU" FT /db_xref="InterPro:IPR002187" FT /db_xref="InterPro:IPR002332" FT /db_xref="InterPro:IPR011322" FT /db_xref="InterPro:IPR015867" FT /db_xref="InterPro:IPR017918" FT /db_xref="UniProtKB/TrEMBL:Q8GMJ2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28407.1" FT /translation="MKKIEAIIKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHAEL FT YRGAEYIVDFLPKVKIEIVIADDLVEKAIDAIRRAAQTGRIGDGKIFVSNIEEAIRIRT FT GESGLDAI" FT CDS 220854..222263 FT /codon_start=1 FT /transl_table=11 FT /gene="glnA" FT /locus_tag="RPA2967" FT /product="glutamine synthetase I" FT /function="InterPro IPR001637:IPR001691:IPR004809 COGs FT COG0174" FT /EC_number="6.3.1.2" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5K7" FT /db_xref="InterPro:IPR001637" FT /db_xref="InterPro:IPR004809" FT /db_xref="InterPro:IPR008146" FT /db_xref="InterPro:IPR008147" FT /db_xref="InterPro:IPR014746" FT /db_xref="UniProtKB/TrEMBL:Q6N5K7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28408.1" FT /translation="MTTAKEVLKSIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIF FT SEGTMFDGSSIAGWKAINESDMTLMPDPATATIDPFFAETTMVITCDILEPSTGEPYNR FT DPRGIAKKAEAQVKALGIGDSVFVGPEAEFFVFDDVRYSASPYNTGFKLDSSELPTNSD FT TEYEGGNLGHRIRTKAGYFPVPPQDSVQDMRSEMLGAMAKMGVKVEKHHHEVASAQHEL FT GMKFDTLTHMADQMQIYKYCIHQVAHIYGKTATFMPKPVFGDNGSGMHVHQSIWKDGKP FT TFAGNKYADLSETCLHYIGGIIKHAKAINAFTNPSTNSYKRLVPGYEAPVLLAYSARNR FT SASCRIPYTTSPKAKRVEVRFPDPMANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYD FT LPKEELKQIPTVCGSLREALENLDKDRAFLKAGGVFDDDFIDAFIELKMTEVARFEMTP FT HPVEFEMYYSY" FT terminator 222285..222316 FT /note="TransTerm prediction, 98+%" FT CDS 222562..223311 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2968" FT /product="probable transcriptional regulator, TetR family" FT /function="InterPro IPR001647 COGs COG1309" FT /db_xref="GOA:Q6N5K6" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR015292" FT /db_xref="UniProtKB/TrEMBL:Q6N5K6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28409.1" FT /translation="MKSNGHATRLRTTPSLGGQSHDTRARMIEAAIEVFGSVGYDGATT FT RQLAERAGVNQAAIPYHFGGKRELYVAAAQAIADYMRSRIEPLIDELRTASVDPVGHID FT AVVMRFFQFIAGDEEPEAWTVFFVRCERDADDAFRIIYYQSVARFQAALIAEVAAATGR FT SPDDEDLKVRVAVVLGAISNFRTLRNVMLSSLGWDTFDAERKLTVETAVRRLALAELLG FT IHADAPSDVHPPLGSASGAQPSPTARP" FT CDS 223324..223935 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2969" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N5K5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28410.1" FT /translation="MTKPDLTQAYLEWTKQKLDESAATIAKIEEAAAKIGDASSAKAQE FT ALAQLRTARDAFQAQVSAVQADFGASKQVTDAALSAVSAQWNEVELAFQKFLGAAGDQA FT GLVKDALAARAEAQRQSFLSSLETIHTGAAAALEQGRKEMESSLRRWTEETEKTLGPKL FT TQLSAAGDETWNALKAGLDETAAVYEKTWARISQAFTKPK" FT CDS complement(224078..225355) FT /codon_start=1 FT /transl_table=11 FT /gene="bioA" FT /locus_tag="RPA2970" FT /product="adenosylmethionine-8-amino-7-oxononanoate FT aminotransferase" FT /function="InterPro IPR005814:IPR005815 COGs COG0161" FT /EC_number="2.6.1.62" FT /db_xref="GOA:Q6N5K4" FT /db_xref="InterPro:IPR005814" FT /db_xref="InterPro:IPR005815" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q6N5K4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28411.1" FT /translation="MSHASPVWHPFTQHAVQGDTPTIVHSEGAWLQADDGRRIFDAISS FT WWVVTHGHRHPTIISAIKQQSDQLDQIIFAGFTHPPAEQLAQRLVEITPPELTHVFFSD FT SGSTSVEVGLKMALGYWLHSGESRRRILALEGAYHGDTIGGMSVGERGVFNAPYDPLLF FT DVSRLPFPRAGAEQATLDALEQACRNEAVAALIVEPLVLGAGGMLIYPPWVLAEMARIC FT KAHGLLLIADEVMTGWGRTGTLFACEQANVVPDIACYSKGLTGGSVPLAVTMCRREIFD FT AHFSTDRRKTFFHSSSYTANPIACAAALANLQVWASEPVRQRIDDLAAVHARALNRFRD FT DARFSNVRQIGTIAAVDLQVGDSGYLADVGPRLYAYFINRGLLVRPLGNTIYLMPPYCS FT TAVEIEAVYEAIAAVPEVLARGSDAG" FT CDS complement(225352..225990) FT /codon_start=1 FT /transl_table=11 FT /gene="bioD" FT /locus_tag="RPA2971" FT /product="dethiobiotin synthetase" FT /function="InterPro IPR002586:IPR004472 COGs COG0132" FT /db_xref="GOA:Q6N5K3" FT /db_xref="HSSP:1DAI" FT /db_xref="InterPro:IPR004472" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5K3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28412.1" FT /translation="MSARIVVTGTDTGIGKTVFAAALAGALDATYWKPVQSGLEDETDS FT GAVQRLSGLAADRILPERYRLQTPASPHLAAEIDGVDIDVAALELPSVSRPLVVEGAGG FT LMVPLTRETTYIDVFARWAAPLVLCARTSLGTINHTLLSIEAIRARDIPLLGVAFLGDE FT NLDSEQIIVELGHTRRLGRLPRLERLDAAALRAGFAAAFEPRDFLGDAP" FT CDS complement(225987..227117) FT /codon_start=1 FT /transl_table=11 FT /gene="bioF" FT /locus_tag="RPA2972" FT /product="8-amino-7-oxononanoate synthase" FT /function="InterPro IPR004839:IPR006185 COGs COG0156" FT /EC_number="2.3.1.47" FT /db_xref="GOA:Q6N5K2" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q6N5K2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28413.1" FT /translation="MYQSLEADLRSLADAGRRRKLQPRAGVDFTSNDYLGLAESDELRQ FT AAANAVARGVPIGAGGSRLLRGNHEEHEALEAEAADYFGAESALYLGGGFSANHAIFAT FT LPQRGDLVLYDELIHASVHEGMRRGRATCESVPHSDIDAFDARLRQWRASGGRGRAWIA FT VESVYSMDGDSPRLDELVAVADRHDAILVIDEAHATGVAGPEGRGLAASFEGRANVITL FT HTCGKALGTMGGFVLGPKIVRDFLVNRARPFIFATAPSPLIAAVTRAALDISRTRPERR FT ERLAALVAFADRELKQRCGITSSGSHILPIIVGANSTAVALAASLQRRGFDVRAIRPPT FT VPEGTARLRIALSANLSEDVIASLFAALAEDMRAAA" FT CDS complement(227258..227821) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2973" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5K1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28414.1" FT /translation="MTANDPTDEALAAIASIFERPDANAEARDEVVLEEGAPSVPPSSD FT ADAQGDEPVAAEAVSDRDVSEPTDATEQAKPAEEAASAAVPEPDDGDDDLERYTREGPG FT PLDALRFKWRMRRDDRGYFVDETIGASVHPISSGPMPRADAIAFIAARDQETRRRFEAL FT RNEIVMGPSERGYDEDSDELDDAR" FT CDS complement(227910..229340) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2974" FT /product="putative 6-aminohexanoate-cyclic-dimer hydrolase" FT /function="InterPro IPR000120:IPR001687 COGs COG0154" FT /EC_number="3.5.2.12" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5K0" FT /db_xref="InterPro:IPR000120" FT /db_xref="InterPro:IPR020556" FT /db_xref="UniProtKB/TrEMBL:Q6N5K0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28415.1" FT /translation="MAFKEYGDYDGVGLAELVRSKQVTAAELLDEAIARTDALDPTLNA FT VVVRHDDYARKQIEAGLPQGPFTGVPFLLKDLDLLAGTRTTFGASLYKDFVAPHTGTLA FT GRFLAAGVTIFGKSASPEFGLMPTTESRLHGPTRNPWNLDHSSGGSSGGAAAAVAARIL FT PVAHASDGGGSIRIPASACGVFGLKPTRARNPIGPDRGEGWGGFACGHVVSISVRDSAA FT MLDALHGPEPSSPYVAPPPERPFAEEVGREPGRLRIAFTDRSTYGDAIDPEVAAAVRDT FT ARLLEGLGHHVEQRAPVLPADPAQVIATIVACNTGLAVQLAEQTLGRAMTERDFEVLTL FT ASAANARKASGVDYCAAQLAAFQISRALAEFFTSIDVFLSPTLCTLPLRIGEINTMAHD FT LSGISPTLRRYIPGTSLFNMSGQPSMSVPLAWSASGLPIGLMFAGRFGDEATLLRLAAQ FT LERERPWKTRRPPVYAST" FT CDS complement(229540..230529) FT /codon_start=1 FT /transl_table=11 FT /gene="serA1" FT /locus_tag="RPA2975" FT /product="putative phosphoglycerate dehydrogenase" FT /function="InterPro IPR006139:IPR006140 COGs COG0111" FT /EC_number="1.1.1.95" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5J9" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N5J9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28416.1" FT /translation="MTSNTKKLLVTESLSQRGRALIAERGDIEMIEFPNMISAEDFDAL FT LRTEAPVHGVALGATRFGERELDAAQQMRVVARIGVGYDAIDVPALNKRKVPLMTAGTA FT NSPSVAEQALFMMLTLAKRGAELHALVKTGAWATRLGLLPFDLFGKTVLIVGFGRIGTR FT TAKRCLAMEMTVLVYDPYVPAAAIEAAGCKQVSDLDAALPDADFVSLHCPKTAETTGLF FT DAARLSKMKPTAYLINTARGGIVVEQALYEALLAGKLAGAGLDVFEQEPPPHGHKLFDL FT PNVIIAPHVAGVTREALDRMGEQTARNMLSVLDGDPIRVNVVNQDVLG" FT CDS complement(230638..231537) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2976" FT /product="Permeases of the drug/metabolite transporter FT (DMT) superfamily" FT /function="InterPro IPR000620 COGs COG0697" FT /db_xref="GOA:Q6N5J8" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q6N5J8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28417.1" FT /translation="MSDPSPIPARGRIASGGLVFLTVTTVAWGLSWPVTKYLISQWPPL FT PLRGLTGIAGSLALFGYAALRGDSLAVPRDQRLRLVISAFFNVTLWMAVMGLALLWLPA FT GETAVIAYTMPVWTALLAWPLLGERLTLRRVAALALAFGGIAALMGAAGFAASMTKLPG FT ILLALTGALGFALGTIFLKRFPIALPGATSAAWQIGLGCIPVAVIGLAFEIPHVSVLTP FT LGWAGLVYLVVIQFCIAYVCWFAALQRLPASVAAIGTMATPVIGVVASAVALHEPLGVG FT QIAALVMTLTGVALATRS" FT misc_feature complement(order(230647..230703,230716..230781, FT 230803..230868,230914..230979,230995..231051, FT 231067..231132,231160..231216,231232..231297, FT 231337..231402,231433..231498)) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 232202..235975 FT /codon_start=1 FT /transl_table=11 FT /gene="nrd" FT /locus_tag="RPA2977" FT /product="ribonucleotide reductase" FT /function="InterPro IPR000788 COGs COG0209" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5J7" FT /db_xref="InterPro:IPR000788" FT /db_xref="InterPro:IPR002876" FT /db_xref="InterPro:IPR013344" FT /db_xref="InterPro:IPR013678" FT /db_xref="UniProtKB/TrEMBL:Q6N5J7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28418.1" FT /translation="MKIERRYTKDGQSPYADIAFRLTTSEIRNPDGSVVFRLENVEVPE FT FWSQVASDVLAQKYFRKAGVAARLKKVEEESVPSWLWRSVADTDALTALPESERYTSEH FT SAKQVFDRLAGCWTYWGWKGSYFSSEDDARAFFDELRYMLAMQMVAPNSPQWFNTGLHW FT AYGVDGPGQGHYYVDYKTGKLTKSKSAYEHPQPHACFIQGIEDDLVNDGGIMDLWVREA FT RLFKYGSGTGSNFSRLRGEGERLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMV FT VVDVDHPDIEAYIDWKVKEEQKVAALVTGSKVNQKHLKAILKACVNCQGSGDDCFDPEK FT NPALRREVKLARRALVTDAMIKRVIQFAKQGYKEIDFPIYDTDWDSEAYLTVAGQNSNN FT SVSLKDDFLRAVETDGDWHLTARTNKKVVKTLKARDLWEKIGTAAWASADPGLHFNTTM FT NDWHTCKASGDIRASNPCSEYMFLDDTACNLASANLLAFYDVGANRFDLDAYEHLCRLW FT TVVLEVSVLMAQFPSKQIAELSYEFRTLGLGFANIGGLLMTMGLSYDSKEGRALCGALS FT AIMTGTAYATSAEMAAKLGAFPGYKKNADHMLRVIRNHRRAAHGESRVYEALSVNPVPL FT DHTNCPIPDAVAHAKAAWDKALELGEQHGYRNAQVTVIAPTGTIGLVMDCDTTGIEPDF FT ALVKFKKLAGGGYFKIINRAVPAALRVLGYPEHQIQEIEAYAVGHGSLSNAPAINASTL FT KAKGFTDEALAKVEKALPTAFDIKFAFNKWTFGEDFLKDVLKIEAEQIAQPNFDLLTAL FT GFTKREIEAANIHICGAMTVEGAPHLKPEHYAVFDCANPCGKIGKRYLSVESHIRMMAA FT AQPFISGAISKTINMPNDATVEDCKSAYMLSWKLALKANALYRDGSKLSQPLNSQLIAD FT DDEDEDIDTFLDKPMAARATHISEKVVERLVERIVVMREREKMPDRRKGYTQKAVVGGH FT KVYLRTGEYDDGRLGEIFIDMHKEGAALRSFINNFAIAVSLGLQYGVPLEEYVDAFTFT FT RFEPAGPVQGNDSIKYATSILDYVFRELAVSYMGRFDLAHVDPTETGFDAIGKGVDEGK FT VPDGGVIAGPASATKYLSKGLTRSRTDNLVVMRSTPAHPADTTPRNAPSGAAPTVTALA FT ASRVGDALEGATALKQEVQTELSPTEKLEALQWSKATTAATQPAPSKAERRAEAKAKGY FT EGEMCSECGNFTLVRNGTCMKCDTCGSTTGCS" FT CDS 236099..237193 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2978" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N5J6" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28419.1" FT /translation="MIASQLVSIAQDLQQEYERFGLVDLLQSAIQISSDRPNVNNSTYR FT DITGSLKDRARAVLEQSVFRTYPLDTLKLLSNSEISSILPSTIANMIIGGFPNRKESAI FT SSAELNMYLVEVKSILNQIAGFLNFNERLGVEKYEIPNEKVGLAIKIPRKIFSNQVISF FT QSRLLVFSSFFRSVTELVTGSREDPELVYLSTTDPTTVVAVAGTAAMGILTFYKLILEI FT AEKHISLRKAWDELKNSKLPESSLSEIEKGIQAGLETSNNEAIDKAFKAVELKVSADRS FT KELRVEIGRQALELTLDISKGARIFVSLESQQQIELMANEALDDTTEIKLHIEEQKLLE FT ARLDNLTSELSTPRAELSYIAPPK" FT CDS 237357..237605 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2979" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5J5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28420.1" FT /translation="MTISATSVRFDDHTMWVELSDGRTLGVPLAWFPRLLRATPAERAQ FT VELSRVGLHWDALDDDISVAGLLAGRGDVTRASESAS" FT CDS complement(237712..238308) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2980" FT /product="integrase" FT /function="InterPro IPR001584 COGs COG2801" FT /db_xref="GOA:Q6N5J4" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6N5J4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28421.1" FT /translation="MTVPVLPNDRWSLDFVSDQMTDGRRFRILTVVDDCTRECLALVVD FT TSLSGARVARELDRLVAERGKPKMVVSDNGSEFTSNAILTWADQSRIAWHYIAPGKPMQ FT NAFIESFNGRLRDELLNETLFTSLAQARVALRCWRADYNDARPHSQLGWRTPSEFAATC FT NPRRDLALRYIESSTPAPATAHMGPSNHPNELRPG" FT misc_feature complement(237712..238891) FT /note="ISR1-like IS element" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(238305..238631) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2981" FT /product="P2 ISBm2" FT /function="COGs COG2801" FT /db_xref="UniProtKB/TrEMBL:Q6N5J3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28422.1" FT /translation="MVTPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDD FT AGLRQRMRAIAHERRRFGYRRLHVLLKREGYLVNHKKLFRLYREEKLTVRRRGGRKRAA FT HELP" FT CDS complement(238625..238891) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2982" FT /product="possible insertion element ISR1 hypothetical 10 FT KD protein A3" FT /function="InterPro IPR002514" FT /db_xref="GOA:Q6N5J2" FT /db_xref="InterPro:IPR002514" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:Q6N5J2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28423.1" FT /translation="MKRSRFSEEQIIGILKEHEAGVSVADLCRKHGVSDASIYKWKAKF FT GGMDVSEAKRLKSLEDENTRLKRLLADAMLDNAALKDLLGKKW" FT CDS 239702..240181 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2983" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5J1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28424.1" FT /translation="MRLAFAGKLVLALSFGSAAQATDVRWTSTKQPAEVLGMPAGEEEA FT DDVLRLTCLKGGAVQIGLGGYKSLGKGKSEPLSVALASGTQSVTLNGKSVHSKNFEMTG FT AFELRADLAPGETKSLIGVLTAGQPIRVSGGLKDQWSVKGLKPIVERFSAACVKN" FT sig_peptide 239702..239767 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.816 atresidue 22" FT CDS complement(240278..241429) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2984" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160 COGs COG2199" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N5J0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28425.1" FT /translation="MPGSVVRVTLSLIGPGIIGVFGVAFLAAWSYDRRRPYLALLAAAC FT ALFALGASSQILYWPRDTGLNAMVSGALYTCAVIAAVEGVLIRSSRAFGLWIDVAIFAA FT FSLALYYFFYVDRSLLARIYVQNFGYGLLLCVAALRLAHLRHGRVVDRILFWTLLLFGL FT HFFPRTVFTVGVSPPSGGPLVFADSVFWQTLQLSLAVLGAALAMAILAAAVSDLIDDLR FT RERDLDHLTGLLNRRGFEEEIAAPMRRAPEGASLILCDVDHFKSINDTFGHDVGDVVLK FT EIGAILRKTARKGDLVGRWGGEEFAVFLPDASLSDATECAERLRQTIANSRIPGLDTRP FT VTASFGVATIREAGDWTALYKLADSRLYLAKASGRDRTVDRGM" FT misc_feature complement(order(240791..240856,240902..240967, FT 241004..241069,241085..241150,241172..241237, FT 241253..241318,241340..241399)) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 241677..242363 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2985" FT /product="conserved unknownl protein" FT /function="COGs COG0702" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5I9" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N5I9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28426.1" FT /translation="MTTSGDSSALKTALVFGATGLIGAHLLRGLLDSADYARVIAVVRR FT PLTFSDPKLTVLIGDLDRLPALAAQLKADEVFIALGTTRKQTPDQAAYYKIDHDYPVAA FT ARIARETGARAVFLVTAVGADAASRSFYLRTKGEAERDIIALGFPRTAIFRPSMLMGER FT AEHRPVERLFIALAHIVNPLLRGTADRYRGIDAGDVARAMVAAARTDAPKLQIYHWREM FT MALLRR" FT CDS complement(243039..243383) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2986" FT /product="probable 5-carboxymethyl-2-hydroxymuconate delta FT isomerase" FT /db_xref="GOA:Q6N5I8" FT /db_xref="InterPro:IPR004220" FT /db_xref="InterPro:IPR014347" FT /db_xref="UniProtKB/TrEMBL:Q6N5I8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28427.1" FT /translation="MPHLVMDYSADHLSRDRIGRMIEQLAVTAAATGVMQAADIKVRAR FT GFDDYLVAGKRDSFVHLAVFMLAGRTPEQKVALSVALRQTLVEHCPDITSLSVDIRDMD FT PEAYKKRLKP" FT CDS 243577..244422 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2987" FT /product="conserved hypothetical protein" FT /function="InterPro IPR000379 COGs COG0657" FT /db_xref="UniProtKB/TrEMBL:Q6N5I7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28428.1" FT /translation="MTTDRPADPRARWAYLSQSERDAAYDVVTAVKNSAELSAERNAAS FT AIARAKLRSELDLAYGPRHSAKIDLYPAARPEAPCLVFWHGGYWQKNSRELFAALVEGI FT AAHGWSVAIAGYSLAPEVTLTDIVAESRAALDWLAAHGPEHGIAGPVVTSGWSAGGHLV FT AMTLDHPVVAAGLSIAGVFELGPLRDTFLNAALRLTDAEIAALSPLRLPPVGKRLDLAY FT GTHELPALVLDSRDLHARRAAVGAPGRLLPLAGHDHFSILAELRRPDGALVQAARELIG FT " FT CDS 244509..245087 FT /codon_start=1 FT /transl_table=11 FT /gene="yrkN" FT /locus_tag="RPA2988" FT /product="GCN5-related N-acetyltransferase" FT /function="InterPro IPR000182" FT /db_xref="GOA:Q6N5I6" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6N5I6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28429.1" FT /translation="MIRPGQAQQEPSSLNRPDQHVTLRPAAKQDLPVFMRELQEAFAVA FT VIEEFGSSPSEPIPSDRDIQQSFDAPGAEVLHIVADGERVGGVVVRIDAATQHNSLDLF FT FIATHAHGRGLGTAAWRAIEQRYPQTKVWQTHTPYFERRNIHFYVNKCGFKIVEYYNAR FT HPDPHEHELEHEPDGLPPDGGFFRFEKIC" FT CDS 245128..246129 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2989" FT /product="putative quinone oxidoreductase" FT /function="InterPro IPR002085:IPR002364 COGs COG0604" FT /EC_number="1.6.5.5" FT /db_xref="GOA:Q6N5I5" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002364" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N5I5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28430.1" FT /translation="MPAPEPLMKAVVVDDYAAIDQVALKQIARPTVTPGSVRVRVQAVG FT IGFVDGLKVQGRYQTKDPLPFIPGTEFAGVIDAVGDGVANYAAGQTVMGIARSGALAEY FT IVVPAEAVAPLPDGVSPEEGASFRANYLTAYYALAERAKLQRDEILLVLGAAGGVGTAA FT IQIGKLLGARVIAGASTAQKRDFALKLGADAVIDYTQPDWRDTFKTLTGGHGADVIFDP FT IGGPVAVEAFRSIAWNGRHIVVGFAAGSIPALPFNLPLLKGGSLLGVDLAQLPRREPDV FT LARCTAELSRLLASGALKPAIVSAFALEDFRAAFTALAGRDALGKVVVRIAP" FT CDS complement(246264..246755) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2990" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5I4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28431.1" FT /translation="MERPMSIKDFEDTVPVFLPEQFFNGRLEGWAVLESLVGGLQKRAT FT IQAEGRWDAAAQTVSFSETYRFDDGYRDTLKWTIRKLGPGRYSGAEPRVDDAAEGDQAG FT CAFNWRYTRDTPQPDGSSTKLNFDDWFYLIEPNACIVRGSAGRLGLPFATGHVTYRKIS FT " FT CDS complement(246877..247173) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2991" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5I3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28432.1" FT /translation="MIKTILLSVAAGALLTTVAAAAPIQAGSAGATAPVSAEHVRMICN FT ESGRCWRSGGGGPRYVQRGYREGYGRGYERRGYRGDSDRGGPGIGLSFGNRGW" FT misc_feature complement(247093..247158) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(247108..247173) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.824 atresidue 22" FT CDS complement(247481..248164) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2992" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5I2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28433.1" FT /translation="MEERTVDPRVWSDHRGADGSSILPLAIASDRITGEIDMKRALVLL FT SCILLACPAIAQTPAPSTTTTSQAPLSAATESFIQQVAISDLFETASARLALARGNEAQ FT QQFANQMLQDHGKTSGDVRRLIVRDSLKVDVPSQLDAPHQALLDKLSANNGDDFVVTYA FT AQQVEAHQKAVALFQSYASNGDLPALKQWAGETLPVLKHHLEMAQKLGPAKAGAPTVGS FT SPAPK" FT CDS complement(248194..248847) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2993" FT /product="Domain of unknown function UPF0126" FT /function="InterPro IPR005115 COGs COG2860" FT /db_xref="InterPro:IPR005115" FT /db_xref="UniProtKB/TrEMBL:Q6N5I1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28434.1" FT /translation="MDKLPIVLDLAGTFVFALSGAVAGARRRLDLFGVLVLAFAAGNAG FT GITRDVLIGAVPPVAVADWRYLGVSLLAGLVTFYLVPVVVRMRSAILMLDAAGLALFAV FT TGASKALAHGLSPVTAVALGVVTGIGGGMARDLLLAEIPTVLRAELYAVAALIAAAIVV FT VGQMLQLPAAPVTAAALLACFALRVTAIRRGWRLPVAKLDEAGDPVKPPPQDGG" FT misc_feature complement(order(248275..248331,248344..248409, FT 248431..248496,248527..248577,248593..248658, FT 248689..248754,248776..248832)) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(248979..249857) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2994" FT /product="transcriptional regulator, LysR family" FT /function="InterPro IPR000847:IPR005119 COGs COG0583" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5I0" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6N5I0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28435.1" FT /translation="MNALNYNHLRYFWAVAHDGNLTRTAQRLNLTQSALSVQIRKLEER FT IGHALFERRGRQLHLTEAGRITLDHADAIFATGEELIDTLRNTGVARQALRVGALATLS FT RNFQMAFLRPVLGRPDVELILRSGSAAELLQLLGALSLDVVLINHAPARDSVNRLVVHR FT LAERSVSLIGTRARLRRKGSLEDRLRGHPVIVPTAGSSIRMGFDALVARLGIRPQIAAE FT VEDMAMMRLLAREDLGLAVLPPIVVKDELDDGRLIEAEQLAGIVETFYAVTIERRFPNP FT VLTKLLRAKKI" FT CDS 249966..251537 FT /codon_start=1 FT /transl_table=11 FT /gene="nuoL3" FT /locus_tag="RPA2995" FT /product="possible NADH-Ubiquinone/plastoquinone (complex FT I)" FT /function="InterPro IPR001750:IPR003918 COGs COG1009" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N5H9" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003916" FT /db_xref="UniProtKB/TrEMBL:Q6N5H9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28436.1" FT /translation="MLPDLLPLAAPLPLLIAAALAFARPGRRPPLVPAMAEAAALLAFL FT ITAGALAVLIMVGPATSPLIGIAGVGLSARLDAVSATMLLLVGFVGWIVVRYARTYLDG FT EAQQGAFLGWLCTAIAAVLLLVQSGNLVQLAACWIATSECLHRLLLFYPNRATAQRAAR FT KKRLFASIGAAAMLGGVTLLATAYHSTDIATINAAARAGDAPAAAMIAAGLLAVAALLK FT SAQFPTHGWLTEVMEAPTPVSALLHAGVINAGGFLLIRFADLMMTVPGVLAVLAMVGGF FT TALFGALVMLTQPAVKTSLAWSTVAQMGFMMLECGLALFPLALLHIVAHSLYKAHAFLA FT SGGAVEQIVAIRRPGPIAVPSGTAVARAFLAALAIYVAIGAGFGLVLGFDHKPPQSLAL FT GAILVFGVAYLLAQGLADAAPRLLTRRSAIYSAATAAGYFALQTAAEWLTSGTLPPPLA FT PGRLEWTLISLAVLSFGGIAIAQALFPLWTSHPATAGLRIHLSNGLYINAALDRLLSGW FT SARATS" FT sig_peptide 249966..250037 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.995) with cleavage site probability FT 0.937 atresidue 24" FT misc_feature order(249978..250034,250077..250145,250182..250250, FT 250293..250361,250464..250532,250575..250628, FT 250773..250841,250884..250952,251058..251126, FT 251154..251213,251247..251315,251358..251426) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 251559..253985 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2996" FT /product="conserved hypothetical protein" FT /function="COGs COG3002" FT /db_xref="InterPro:IPR018752" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5H8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28437.1" FT /translation="MLMTKPPVPQLNLTVVREAAERAARAIPPLWPLESSVAVNPFLGQ FT TGEPLAMAAARLRRVAGAAVTMPRTWYAERIASGELSDVDLAAAIDAAPPTTRPLTIAE FT LKRAAQIEIAPPQALPTVAELASAVSGFDWTGFVAERISAWASGYFDRGQALWAAPKGP FT NAYAAWRLTATHDLTPEIFGLTGFAADVAAAPESADAALIRAVEQLGLSEAASESYFHR FT LLISLGGWAQLARYRLWQAELSGSTDTAVTDLIAIRAVWDSTLLRKYQPQIAAEWTDAI FT NGYVQPLQPTEDDHINAILQDAVERAAQRKLQTVLAASAQPKPDDRPALQMAFCIDVRS FT EPFRRALESLDPRIRTLGFGGFFGLPIAHRRFASDVVEARLPVLLPPRVTTSCSGHTHA FT HEANDRAKRVAARAKRAWGRFKLAAISSFAFVESMGPVYVAKLLSDGLRSGTRRTNADP FT APQFDPPLALGARVDTAEAVLRAMSLTGPFAPLVLIAGHGASVVNNPHASALHCGACGG FT FPGDVNARLLAGLLNDPQVRTALIGRDIAIPADTLFVGALHDTTTDAVTLYDADHPSPA FT HASALAQTRDWLATAGALTRSERALRLPRAATGGAIARRARDWAEVRPEWALAGCRAFI FT AAPRPHTSGRDLQGQAFLHDYDWRKDTDFSVLELILTAPVVVASWISLQYYGSTVAPET FT FGAGNKLLHNVTGGIGVVEGNGGLLRAGLPWQSVHDGERLVHQPLRLSVLIEAPHEAIS FT TILDRYPEVRALFDNRWLHLFALDDDGRMNWRYVGDGGWEHADNPPTNQRVASFE" FT CDS 254142..254429 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2997" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5H7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28438.1" FT /translation="MNRTHRTSPMQNIEPPSCGVEQNIVLIGKDGLNRWVAREQNGRFG FT GLFVSRAHAIKFALSELGQSPHAIVDISQPAILDVFTSSGAASTATQLAA" FT CDS 254433..255356 FT /codon_start=1 FT /transl_table=11 FT /gene="dapA1" FT /locus_tag="RPA2998" FT /product="putative dihydrodipicolinate synthase" FT /function="InterPro IPR000307:IPR002220:IPR005263 COGs FT COG0329" FT /EC_number="4.2.1.52" FT /db_xref="GOA:Q6N5H6" FT /db_xref="InterPro:IPR002220" FT /db_xref="InterPro:IPR005263" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q6N5H6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28439.1" FT /translation="MAKLCSTTDWLTGYIPDLPTPFNEAGDIDLVSLARLIARAISSGA FT SAVVICGTAGEASTLTPAEQTAVISEAVGIAGRRIRVIAGAGSNATSQAIELAARAQSA FT GADAVLSVVPYYNKPTQDGIRAHFDAIGRAIELPVLLHDVPSRTARPLADDTIVRLARS FT GRFTGLVDGSGDVLRPLRLRPRLPAGFQMLSGDDTTSFGFLASGGDGAVSEVANIASDL FT CRTIHTYCRQGRLQSARYLQKRLLPLASSLDQDSPASLKYALNLLGLIRPDTRLPIVPL FT AGGSAAHLAAVLAAMADEDLAETLGA" FT CDS complement(255388..255834) FT /codon_start=1 FT /transl_table=11 FT /gene="ptsN2" FT /locus_tag="RPA2999" FT /product="putative nitrogen regulatory IIA protein" FT /function="InterPro IPR002178 COGs COG1762" FT /EC_number="2.7.1.69" FT /db_xref="GOA:Q6N5H5" FT /db_xref="HSSP:1A6J" FT /db_xref="InterPro:IPR002178" FT /db_xref="InterPro:IPR016152" FT /db_xref="UniProtKB/TrEMBL:Q6N5H5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28440.1" FT /translation="MVIGDILLPAHVVVGLRCSDRAQLISELSSIASKTVALSQGLLSG FT RLLERERLGSTGVGDGVAIPHARFEKLAQPFALFARLQQPIDFDAIDGKTVDLVFLLLL FT PAASSREQLPLLASVARHLRQQAIARELRAAADASTAFQVLTRA" FT CDS complement(255858..256541) FT /codon_start=1 FT /transl_table=11 FT /gene="kdpE" FT /locus_tag="RPA3000" FT /product="two-component osmotic transcriptional regulator FT kdpE, winged helix family" FT /function="InterPro IPR001789:IPR001867 COGs COG0745" FT /db_xref="GOA:Q6N5H4" FT /db_xref="HSSP:1B00" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q6N5H4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28441.1" FT /translation="MPIKVLIIDDEPPIRKLLRMGLGSQGYEVIEASNGKLALQAMANT FT PPDLVVLDLGLPDLPGHELLRQIRARSESVPIVVLSSRGDEAGKVEALDLGADDYVTKP FT FGMDELLARLRAALRHQLQVQGERPVFRVGDLSVDLVRRIVKLADKDVKLSPKEYDLLR FT VLVQHAGKVLTHKFLLHELWDELTDAQYLRVYVRQLRQKIEPDPERPQYLLTETGIGYR FT LKAPN" FT CDS complement(256547..259270) FT /codon_start=1 FT /transl_table=11 FT /gene="kdpD" FT /locus_tag="RPA3001" FT /product="two component osmosensitive K+channel and sensor FT histidine kinase, KdpD" FT /function="InterPro FT IPR001687:IPR003594:IPR003661:IPR003852:IPR004358:IPR005467 FT COGs COG2205" FT /db_xref="GOA:Q6N5H3" FT /db_xref="InterPro:IPR003018" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR003852" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR006016" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:Q6N5H3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28442.1" FT /translation="MPDPRVEPPSRPSPDALLEQARRQEPGTGRLKVFLGAAPGVGKTY FT AMLQSAHARAKAGVDVVIGYAETHGRAETEALLAGLETVPRRRIPYKGQVLEEMDLDAV FT LARRPQLAIVDELAHSNAPGSRHPKRYLDVLELLANGIDVYTAVNIQHIESLNDVVAQI FT TTVRVRETVPDSAFERADAIELVDLTPDDLIQRLKEGKVYVPKQAERALEHYFSPGNLT FT ALRELALRRTAERVDEQLLSHMQANAIPGPWAAGERVLVCVSHDQRSQGLVRYTKRLAD FT RLRAPWTAINIETRRSLSLTEQQRDRLADTLRLAEALGGEALAIPGGDRSLAHDILAFA FT RANNITQIVVGKAPRSFWYEALRGSTVHELVRGSGNISIHVMTGTAVSIEESQTGSLRP FT AEGTEPFNPWPYPMALVLVGIGLGVAKLIEPFFSIENVDLVFLTAVVGVAVRYGLGPSL FT LASVVASLCYNFFFLPPVYTFTITDPTNIVAFFFFMLIAILVSNLAGRVRAQATAAAQR FT VRTTESLYAFSRKLAGTAALDDVLWATAYQIALMLKVRVVLLLPEQGRIAVKAGYPPED FT QLDPADLAAANWAWENDRVAGRGSDTLPGAKRLFLPMRTGRGPIGVIGIDDDRAGALLT FT PDQRRLLDALTDQGALAIERVHLVEDMDRVKRDAESDRLRQALLTSISHDLKTPLAAVL FT GAATTMRDLASHLSDAQRTELIGTIVEESERLNRFIANLLDMTKLESGAVVPNSAAHDL FT GELVGATLRRATSILAQHTVKLDLGHDLPLIEVDPVLFEQALFNLLDNAAKYAPAGSAI FT QLRAAQSGGQVELQVRDEGEGIPPAELETVFDKFYRVRKGDHIRPGTGLGLAIARGFIE FT AMGGRLSAGNRSDRSGAAMTIRLPIASRGDALISAA" FT misc_feature complement(order(257744..257809,257831..257896, FT 257909..257974,257996..258046)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(259316..259921) FT /codon_start=1 FT /transl_table=11 FT /gene="kdpC" FT /locus_tag="RPA3002" FT /product="potassium-transporting atpase c chain, KdpC" FT /function="InterPro IPR001993:IPR003820 COGs COG2156" FT /db_xref="GOA:Q6N5H2" FT /db_xref="InterPro:IPR003820" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5H2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28443.1" FT /translation="MLKEVRPAVVSLLALTMITGLAYPLAVTGLATVLFPYQAQGSLVE FT RGGKVVGSALIGQEFKGDEYFHGRPSATVAPDPADSSKTVSAPYNAANSGGSNLGPTSK FT ALADRLSEDVAKLKAENPAAAIPVDLVTTSGSGLDPDISPEGALFQVPRVAKARGVPEE FT QIRKLVGASINQPLGGVLGEPRVNVLKLNLALDAAAPR" FT misc_feature complement(259820..259885) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(259853..259921) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.959) with cleavage site probability FT 0.598 atresidue 23" FT CDS complement(259934..262063) FT /codon_start=1 FT /transl_table=11 FT /gene="kdpB" FT /locus_tag="RPA3003" FT /product="potassium-transporting atpase b chain, KdpB" FT /function="InterPro FT IPR001757:IPR002048:IPR003439:IPR005834:IPR006379 COGs FT COG2216" FT /db_xref="GOA:Q6N5H1" FT /db_xref="InterPro:IPR000150" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006391" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="UniProtKB/TrEMBL:Q6N5H1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28444.1" FT /translation="MTAMDAVQIKTRGKSSTLLDPKIVLPAIGTSFAKLDPRVMIKNPV FT MFVVEVVAALTTVLFVRDLVTGSADLWFTGQIILWLWFTVLFANFAEAVAEGRGKAQAN FT TLRETRVGTVAKRLLMPGNTELYEGVAAEHLSVGDLVLVEAGDVIPGDGEVVEGVASVN FT EAAITGESAPVIRESGGDRSAVTGGTTVISDRIVVRITAEVGHSFLDRMIKLVEGAERQ FT KTPNEIALNILLAGLTIIFVFATVTIPSFAAYAGGQISVVILVALFVTLIPTTIGALLS FT AIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRQATAFRPVRGVSER FT DLADAAQMASLADETPEGRSIVVLAKEKHGIRGRDLAELGAHFIPFTAQTRMSGVDIGG FT SSIRKGAVDSILASVSAVPGVASIQGNVARAIEGAANVEGARELVAIADEIAKAGGTPL FT AVARDGKLLGVIQLKDIVKGGIRERFAELRRMGIRTVMITGDNPMTAAAIAAEAGVDDF FT LAQATPEDKLRLIRDEQAKGKLVAMCGDGTNDAPALAQADVGVAMNSGTQAAREAGNMV FT DLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFLAFYPQLGVLNVM FT HLASPQSAILSAIIFNALIIIALIPLALKGVSYRPVGAAALLRRNLLVYGLGGILVPFI FT GIKVIDLAVSALHLV" FT misc_feature complement(order(259955..260020,260060..260125, FT 260156..260221,261215..261280,261311..261376, FT 261785..261850,261881..261946)) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(262073..263776) FT /codon_start=1 FT /transl_table=11 FT /gene="kdpA" FT /locus_tag="RPA3004" FT /product="potassium-transporting ATPase, A chain, KdpA" FT /function="InterPro IPR000719:IPR004623 COGs COG2060" FT /db_xref="GOA:Q6N5H0" FT /db_xref="InterPro:IPR004623" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5H0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28445.1" FT /translation="MTFIGWCQIALFGAVVVALVKPLGWYMTRVFAGEWTPLTPVLRPV FT ETMLYRAAGVDPKQEQHWLTFTLAMLLFHIGGFAIIYAVLRLQALLPFNPAEQGAVAPD FT LAFNTAISFLTNTNWQNYGGESTLSYLSQMLALTHQNFLSAATGIVLAMALIRGFSRAS FT VRTIGNFWVDITRCTLYVLLPICIPYALFLVWQGMPQTLGSYVDATTLEGAKQTIAVGP FT VASQVAIKMLGTNGGGFFNANAAHPFENPTALSNFVQMLSIFVLGAALTNVFGRMIGNQ FT RQGWAILGVMGVLFVVGIAVAYWAEASGTATLDALGITGGNMEGKEVRFGIVASALFAV FT VTTAASCGAVNAMHDSFTALGGMIPLINMQLGEIIVGGVGAGLYGMLLFVVLAIFVAGL FT MVGRTPEYVGKKIEAREVKMAMLAILVLPLMYLGWTAIAVVLPSAVASMGNAGPHGFSE FT VLYAFTSATANNGSAFGGLTGNTFFYNLTLATAMFVGRFMMIVPTMAIAGSLAGKKLVP FT PSAGTLPTTGGLFVGLVVGVILIIGGLTFFPALALGPIVEQVSMSAKTLF" FT misc_feature complement(order(262124..262189,262292..262357, FT 262442..262507,262571..262636,262649..262705, FT 262727..262792,262853..262918,262940..263005, FT 263183..263239,263300..263365,263522..263587, FT 263699..263764)) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 264108..264401 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3005" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5G9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28446.1" FT /translation="MKAIKASVGAHLVGTTRIERSVVSVAVTTPLLAADRGGCRPSGTI FT SSSRRATTSKLELDPQPVQFRSGDHALGRTQHNQNAAEQSSQDGWHQVSSGG" FT CDS 264707..265267 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3006" FT /product="hypothetical protein" FT /function="COGs COG0174" FT /db_xref="UniProtKB/TrEMBL:Q6N5G8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28447.1" FT /translation="MTRTSPLWISGLRAAVDTLRAKADRATAAWLRSKATLAVGRHNRQ FT EASRVPSEHTASGIRGERPFTRPCAAVLAPGIPLLLVKHHPEGGWIVLDEAGQCRGHFL FT FRSSALAFACRTAGEIKPAILLDDDQAERRRHASPIHWLRRLNDWLSPSDAAPSAVQMS FT RPAQLRAASRSSLQATMDDRRAH" FT CDS 265275..266015 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3007" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5G7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28448.1" FT /translation="MPRRSKATRQMMSRACLLFLGVAAASTTLLILGVGPSWIAFANLG FT ISLAAAGIAAHPRWTGPALTAAKPWFPRRDRSRANRRATFVSIAAPLLPRPTIRRFKRV FT ARQSDMIHRRRADAEARLRDFGDQISAASMKTSPTIRKLRDLIAVLSIQAVMADEAVKM FT LAHEIAASIQDQLQDGKTIARGRRQSDDRWIDISPDEWRKLRLDASLAIAHHHASGETA FT YSQLELAVSVHHGEHCAQQTVLTP" FT sig_peptide 265275..265424 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.316 atresidue 50" FT misc_feature 265323..265391 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(266005..267909) FT /codon_start=1 FT /transl_table=11 FT /gene="kup2" FT /locus_tag="RPA3008" FT /product="potassium uptake protein Kup" FT /function="InterPro IPR003855 COGs COG3158" FT /db_xref="GOA:Q6N5G6" FT /db_xref="InterPro:IPR003855" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5G6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28449.1" FT /translation="MTEAVSDVTLAKASPKPNSFWTLALGSIGVVYGDIGTSPLYALKE FT SLTAASAGGALTQEMIFGVLSLMLWTLLIIVTLKYVLLIMRADNHGEGGTLTLMALLQS FT VMRRRFAAISLLGMAGAALFYGDAIITPAISVLSAVEGLKLVAPGFDPYILPLSMAILV FT GLFLVQSWGTAAVATWFGPLMLIWFGLMAVAGTANLMDNLHILGAVNPIYGIDFLLHHG FT HAGLLALGAVFLTVTGAEALYADMGHFGRRPIQVAWLVLVFPALALCYLGQGAMLLSHP FT ERLENPFFLLFPDWALLPMVWIATGATIIASQAVISGAYSLTQQAIQLGLLPRMEIRRT FT SETEKGQIYIPRANWLLLIAVLYLVFAFKSSSALASAYGIAVTGTMVLTSIMAFFVMRK FT CWHWPAAVATAIIVPFLIIDLIFLMANLLKIVDGGWIPLMIGVGLMGVMVTWRRGSKIV FT ARKTVRDEIDLNDFIASISVSSSISRVRGTAVFLTGNPNSTPTSLMHNLKHNKVLHEKN FT VILRVATEDVPRVSEDERLSYEPVNDSFAKITIRFGYMETPDVPKALVACRPLGFAFDM FT MSTSFFLSRRVIRQANPSEMPRWQGLLFVNMAKWSDDASLYFKIPTGRAVEVGMQITV" FT misc_feature complement(order(266545..266610,266641..266706, FT 266722..266778,266809..266865,266950..267015, FT 267076..267141,267178..267243,267319..267384, FT 267406..267462,267508..267573,267658..267723, FT 267784..267849)) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 268415..268570 FT /codon_start=1 FT /transl_table=11 FT /gene="pucBc" FT /locus_tag="RPA3009" FT /product="light harvesting protein B-800-850, beta chain C FT (antenna pigment protein, beta chain C) (LH II-C beta)" FT /function="InterPro IPR000066:IPR002362" FT /db_xref="GOA:P35108" FT /db_xref="InterPro:IPR000066" FT /db_xref="InterPro:IPR002362" FT /db_xref="UniProtKB/Swiss-Prot:P35108" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28450.1" FT /translation="MVDDSKKVWPTGLTIAESEEIHKHVIDGARIFVAIAIVAHFLAYV FT YSPWLH" FT misc_feature 268505..268564 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS join(268583..268663,268666..268782) FT /pseudo FT /codon_start=1 FT /transl_table=11 FT /gene="pucAc pseudogene" FT /locus_tag="RPA3010" FT /product="pseudo light-harvesting protein" FT /db_xref="PSEUDO:CAE28451.2" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(269305..269943) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3011" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N5G5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28452.1" FT /translation="MTFQVILCYETVRQVAGLESELKANGFGQAQVLPNGTVPNRGSIV FT DLTNAISKLGVLRATAAGLAGTISRGGAVAIVPAHFGAGGKATEIMKKYNPIVDRPAAK FT PSAWDDAAPFSSLLRLPVITKSQPFKGHSGTPLIIEQEGAYRSNSGEPLVIKQTGGYRS FT MSGTPLLLDGGPYKSFSGTPLLIEQKDAYSSFSGTPLLVDSNTLFLTRA" FT CDS complement(270094..270273) FT /codon_start=1 FT /transl_table=11 FT /gene="pucAd" FT /locus_tag="RPA3012" FT /product="light harvesting protein B-800-850, alpha chain D FT (antenna pigment protein, alpha chain D) (LH II-D alpha)" FT /function="InterPro IPR000066:IPR002361" FT /db_xref="GOA:P35104" FT /db_xref="InterPro:IPR000066" FT /db_xref="InterPro:IPR002361" FT /db_xref="InterPro:IPR018332" FT /db_xref="UniProtKB/Swiss-Prot:P35104" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28453.1" FT /translation="MNQGRIWTVVKPTVGLPLLLGSVAIMVFLVHFAVLTHTTWVAKFM FT NGKAAAIESSIKAV" FT sig_peptide complement(270163..270273) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.704) with cleavage site probability FT 0.383 atresidue 37" FT misc_feature complement(270169..270234) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(270286..270441) FT /codon_start=1 FT /transl_table=11 FT /gene="pucBd" FT /locus_tag="RPA3013" FT /product="light harvesting protein B-800-850, beta chain D FT (antenna pigment protein, beta chain D) (LH II-D beta)" FT /function="InterPro IPR000066:IPR002362" FT /db_xref="GOA:P35109" FT /db_xref="InterPro:IPR000066" FT /db_xref="InterPro:IPR002362" FT /db_xref="UniProtKB/Swiss-Prot:P35109" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28454.1" FT /translation="MVDDPNKVWPTGLTIAESEELHKHVIDGSRIFVAIAIVAHFLAYV FT YSPWLH" FT misc_feature complement(270292..270348) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 270861..271568 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3014" FT /product="two-component transcriptional regulator, LuxR FT family" FT /function="InterPro IPR000792:IPR001789 COGs COG2197" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5G4" FT /db_xref="HSSP:1A04" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:Q6N5G4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28455.1" FT /translation="MVRTMDQKLTRRVHQGHLRIFIADDHPVVLSGMKMLLQADPEFEV FT IGEAADGPTALRRAIELQPDVAVFDLSMPGLYGMEVIQKYLAARPKARVVVVSVQEDGA FT NLRRLLKLGVAGYILKRSATDELIRGVHAVAKGGVYLDPAIAGQALGRVVHAAPASLGE FT TSQIAHLSARELDVLRLASVGHSNKVISAKLQVGPKSVETYKARAMEKLGFTNRVELIR FT FALDMGWLENSGL" FT CDS 271792..274068 FT /codon_start=1 FT /transl_table=11 FT /gene="phyB1" FT /locus_tag="RPA3015" FT /product="Bacteriophytochrome (light-regulated signal FT transduction histidine kinase), PhyB1" FT /function="InterPro FT IPR001294:IPR003018:IPR003594:IPR003661:IPR004358:IPR005467 FT COGs COG0642" FT /db_xref="GOA:Q6N5G3" FT /db_xref="InterPro:IPR003018" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR013515" FT /db_xref="InterPro:IPR013654" FT /db_xref="InterPro:IPR016132" FT /db_xref="UniProtKB/TrEMBL:Q6N5G3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28456.1" FT /translation="MTEGSVARQPDLSTCDDEPIHIPGAIQPHGLLLALAADMTIVAGS FT DNLPELTGLAIGALIGRSAADVFDSETHNRLTIALAEPGAAVGAPIAVGFTMRKDAGFV FT GSWHRHDQLVFLELEPPQRDVAEPQAFFRRTNSAIRRLQAAETLESACAAAAQEVREIT FT GFDRVMIYRFASDFSGEVIAEDRCAEVESYLGLHFPASDIPAQARRLYTINPVRIIPDI FT NYRPVPVTPDLNPVTGRPIDLSFAILRSVSPVHLEYMRNIGMHGTMSISILRGERLWGL FT IACHHRKPNYVDLDGRQACELVAQVLAWQIGVMEEQAITRQTLKGQAIQRSLINDIEQL FT HDHRAGLARNSEALLELMGASGLCLHSREGVITIGQTPPGPIIDQLAQLAGRSGGSELF FT QTDRLSTIIPEAGAFAEVASGVLAVPLSRTPPRRVMLWFRPEVAQTVYWAGNPDKSVTA FT ESGRLRPRTSFAAWTEQTHGRAIAWQPHEVAAAVEIRDLIIDVILRNTEKLERINTQLA FT RSNEELESFAHVASHDIKEPLRHIEAFAGLLADNIREMGDERLGVMVSGIEKSSRRLRN FT LINDLAEFSQLGRRSKPLSWVSLETVLNEVLADLQPRITEARAEIQADRLPFARCDHNQ FT IRQVLQNLIANSLKYRDPARPCRIRIFAQPDDNGGRAEIGSAPAIRICVTDNGIGFDKK FT YIDQVFEPFQRLHGPDDYEGSGIGLAICRKIVQRHGGRVGVDTVPGQGSTFWFTLPVSD FT DHGQG" FT CDS 274072..276399 FT /codon_start=1 FT /transl_table=11 FT /gene="phyB2" FT /locus_tag="RPA3016" FT /product="Bacteriophytochrome (light-regulated signal FT transduction histidine kinase), PhyB2" FT /function="InterPro FT IPR001294:IPR003018:IPR003594:IPR003661:IPR004358:IPR005467 FT COGs COG0642" FT /db_xref="GOA:Q6N5G2" FT /db_xref="InterPro:IPR001294" FT /db_xref="InterPro:IPR003018" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR013515" FT /db_xref="InterPro:IPR013654" FT /db_xref="InterPro:IPR016132" FT /db_xref="PDB:2OOL" FT /db_xref="UniProtKB/TrEMBL:Q6N5G2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28457.1" FT /translation="MSSRSDPGQPMASATDPSGRLALDLTECDREPIHIPGAIQPHGYL FT FVVSETDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAASAARLTHALHGGDPAAINP FT IRLDVVTPDGERAFNGILHRHDSIVILELEPRDESRYTNEFFRSVRVAIRRLQTAADLP FT TACWIAASEVRRITGFDRIKVYQFAADWSGQVIAEDRDSGIPSLLDFHFPSSDIPAQSR FT ALYTINPVRIIPDIGYRPSPLVPDINPRLGGPIDLSFSVLRSVSPTHLEYMVNMGMHAA FT MSISIVRDNRLWGMISCHNLTPRFVSYEVRQACELIAQVLTWQIGVLEEAEIVRHSVRM FT RAIQNRLLHELGDEQGLTAGLSRVSEEMLALMGASGFALCSFDGVAAFGRTPSDDEIQA FT LASWLSHRESRGIFQTQQLSASFPEAEVYSDIASGLLAVPLGRASTTLMLWFRPEVAQT FT VTWGGDPHKPVQIGPRGRRLQTRASFEAWREEVRDRSRPWRSHEIVAAEEIRDLVVDVI FT LGRAEELENANRELSRSNDELESFAYVAAHDLKEPLRHIEAFAGLLNDLLLPEARSRLS FT LMVNGIEASSRRLRALINDLAEYSRIGRQARPLQPVDLNQILTEVLSDLKPMLQDARAE FT VVSEPLPTVLCDGSQIRQLLQNLISNAVKYRDAERLPHVTIAATIDSPPPAAPAGANVR FT RARITIADNGIGFDEQYREQIFEPFQRLHGPDEYQGTGIGLAICRKIVHRHGGTISATS FT RVGEGSVFTFTLPLCDQDAAES" FT CDS 276400..276864 FT /codon_start=1 FT /transl_table=11 FT /gene="rphyB" FT /locus_tag="RPA3017" FT /product="response regulator receiver (CheY-like protein)" FT /function="InterPro IPR001789 COGs COG0784" FT /db_xref="GOA:Q6N5G1" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q6N5G1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28458.1" FT /translation="MNRQRTLPTVLVAEDHDYDKLILTEVFARASISADLRFVSDGEQT FT LDYIYGRNRFADRGDAPYPAIVLLDLNMPRLDGRKVVRLLRQDETVRHLVVIALSTSES FT AKHITEAYSIGFNAYLVKPANIADYVEAIRSLWHFWMNTASLPTTEAYRT" FT CDS 276861..277997 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3018" FT /product="response regulator receiver:histidine kinase" FT /function="InterPro IPR001789:IPR003594:IPR005467 COGs FT COG0642" FT /db_xref="GOA:Q6N5G0" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011712" FT /db_xref="UniProtKB/TrEMBL:Q6N5G0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28459.1" FT /translation="MSTIASRILLVDDAEIDYLTMQRMLQKIPGFRVTLDWVSRFDEAA FT TAIDRKEHDLYLVDFRLGPHSGLDLIRDARERGNIKPIIVLTGHGDPMVDQAATEVGAN FT DYLVKGEFDAVTLERAMRYATRQARTLATLDRRLAECRTTARKLVDQSERRAAAEADVL FT KVLRQTMVDQEAERKRIARELHDNLGQMVTLVQFGLDALARGTPSPANLAEKVASLKHI FT VNDLSTSLHRVAWEVRPTALDTLGLEDAVSQLVASWEPHCSLVFDLHLGLGERRLPPDI FT ESALYRIVQEGITNVVRHAHATRVGVILEFRGSDVICIIEDNGCGIPPEQADEHSSRRL FT GLVGMRERLASVDGTVELETEAGRGTALFVRVPLGRPS" FT CDS complement(join(278104..280953,280953..281333)) FT /pseudo FT /codon_start=1 FT /transl_table=11 FT /gene="mexF pseudogene" FT /locus_tag="RPA3019" FT /product="pseudogene of RND multidrug efflux transporter FT MexF; AcrB/AcrD/AcrF family" FT /function="COGs COG0841" FT /db_xref="PSEUDO:CAE28460.1" FT /inference="non-experimental evidence, no additional FT details recorded" FT misc_feature complement(281232..281297) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(281247..281333) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.820) with cleavage site probability FT 0.388 atresidue 29" FT CDS complement(281463..282662) FT /codon_start=1 FT /transl_table=11 FT /gene="mexE" FT /locus_tag="RPA3020" FT /product="RND multidrug efflux membrane fusion protein MexE FT precursor" FT /function="InterPro IPR006143 COGs COG0845" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5F9" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q6N5F9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28461.1" FT /translation="MANTLVRNVALGAGIVAVSVALAGGAALIGRPGGALAETTAAPPP FT AVPVSVALVESKAITPSDAFSGRLEAIERVEIRSRVAGAVQQIQFREGALVNKGDLLVR FT IDPSLYAAEVDRAQAQLSAARARVVFTKADVERSQQLSSSSITQREVDNRLNAYREAEA FT NLRSAEAALKTAELNLSYTEISAPVSGRVGKVEITVGNLIAAGPNSPLLTTLVSVNPIY FT ASFNADEQVVTRALKTLADENTPGAIERIPVEMTTVAGGAPVRGKMQFIDNQVDPRSGT FT VRVRAVFDNADGRLMPGQFARLSVGQPKPEAALLVSERAVGTDQNKKFVMVVDAQNHAE FT YREVTLGASVDGLRVVASGLRAGERIVVNGLQRVRPGVTIKPETVAMEAAASSKTVAQN FT " FT sig_peptide complement(282549..282662) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.596 atresidue 38" FT misc_feature complement(282582..282647) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 282858..283445 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3021" FT /product="probable transcriptional regulator TetR family" FT /function="InterPro IPR001647 COGs COG1309" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5F8" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q6N5F8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28462.1" FT /translation="MAMGRPREFDVDAALDLALHVFWRKGYEGTSMADLTEAMGITKPS FT LYAAFGNKEELFRKALDRYVDGPGGYYQAGLQKPTAREVVEHILHGAVDAMTDPSNPGC FT LAVQGALCCGEAAETIKQELAARRAKTEDDLRLRLDRAITEGDLPAQADAGDLARYVSE FT ILQGMAVQAASGAPSEQLHKLADIALRNWPPV" FT CDS 283576..284742 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3022" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160 COGs COG2199" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N5F7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28463.1" FT /translation="MRFPVLSRFLHPDPRIRRELVELLYTSLPQVMAIGVTSVTGALAL FT TLLGDDPGYAVITFFILVTATARVFSLMRYKARAARFTDADVVRWERLYGAGATAFGLA FT LGALSFRALQLGDAPGAWIAFGLSMSYCVGMVSRAAIRPWIILTAAAALLMPTMIAGLM FT RPELAYKIGAGMLVLFWLTLREASKHLSAAFTERLEAKHRLARQATHDFLTDLPNRAGF FT LQALSDMAGNFTVVAIDLDGFKPINDRHGHHTGDDLLRQVAERLTTCVGADGVAARFGG FT DEFMLLKPVTSAEQGRDEALALARKAVFDLSMPYLLADLPVCIGASAGIAISHAALAGG FT NTAQLLERVDRALYVAKRAGGGCAWADGDIEPSCCPRSTPLAKDSAAA" FT misc_feature order(283636..283704,283732..283791,283852..283920, FT 283933..283986,284005..284064) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 284876..285862 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3023" FT /product="aldo/keto reductase" FT /function="InterPro IPR001395 COGs COG0667" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N5F6" FT /db_xref="InterPro:IPR001395" FT /db_xref="InterPro:IPR020471" FT /db_xref="UniProtKB/TrEMBL:Q6N5F6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28464.1" FT /translation="MKQRVLGSSGISVGEIGLGCMGMSPEFYGSSDDASSLRTLEHAYA FT NGVTLYDTADMYGRGHNEQLLSSFLRAHPDVRIASKFGIVRQDNVLERTIDNSPEYIVQ FT ACDASLKRLGVETIDLYYVHRIDTNRPIEETIGTMARLVTAGKVRALGISECSAATLRR FT AHAVHPIAAVQSEYSLWTRDPEAEVLPACNELGIAFVAYSPLGRGMLTGAINSSDSFEA FT NDYRRRSPRFVGDNLDANLKLVDKIRQLAATKGCTPAQLAIAWLLHQSDRIIPIPGTRR FT IATLDENLGASEVSLSADDLAAIRDALPAGAAVGARYPESALAGLNG" FT CDS complement(285884..286294) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3024" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N5F5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28465.1" FT /translation="MRTIMVLAALLVSSAAFAQSNAPAAGNAPAATNGTPMVGDQPLVQ FT IKPKGHKAAKNTAAKPSVADQMKACLEIEDATKERLECFDAIYPPKPKATKAGAKAKPA FT KAAADCRLLKEEDERLACYNGFADKPAAKPKT" FT sig_peptide complement(286238..286294) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.884 atresidue 19" FT CDS 286431..286757 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3025" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N5F4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28466.1" FT /translation="MRLRRLLGKPTRLHNCRGWPDRHRSVTAAPMKWMLIALAVLLPVA FT AGAEPRKPAAPAVRNETSSLAARPVGSGRNPCAAFGPGFVQVEGSSTCVKLGGGISVGA FT GARR" FT sig_peptide 286431..286577 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.942) with cleavage site probability FT 0.814 atresidue 49" FT CDS 286803..287453 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA3026" FT /product="similar to abortive infection protein" FT /function="InterPro IPR003675 COGs COG1266" FT /db_xref="GOA:Q6N5F3" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:Q6N5F3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28467.1" FT /translation="MGPMTFLRRVPAQRSSAAPHPALRFAPLAGLTLMLAAPGLAIQFG FT LLPFEYRMGALIVVSALCIGLCLWAGFSFTELGFGRPHQWRHWLGAIAVTSLISGIMLL FT QTRLFSFDAKPPAWLSFAPFYVLVSSPCQEVVCRSIPKLITDRMQHGGWAYVLYSAALF FT SLIHLCYGDPALLLNTFLLGVVWGFVYWRTLNIWPLIASHAAVGTLAFALGLA" FT misc_feature order(286863..286931,286959..287027,287061..287129, FT 287256..287309,287322..287375,287388..287447) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(287463..289325) FT /codon_start=1 FT /transl_table=11 FT /gene="kup1" FT /locus_tag="RPA3027" FT /product="potassium uptake protein Kup" FT /function="InterPro IPR003855 COGs COG3158" FT /db_xref="GOA:Q6N5F2" FT /db_xref="InterPro:IPR003855" FT /db_xref="UniProtKB/Swiss-Prot:Q6N5F2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28468.1" FT /translation="MSQQKKGIGLLVSAIGVVFGDIGTSPLYALKETFAGHHPIPVTPD FT NIFGVLSLVFWTVMLLVTVKYVIVIMRADNHGEGGSLALLALVTELTRGRRVHYPLMML FT GVIAAALFYGDSMITPAISVLSAVEGLEVVTPDLKAYVVPITAVVLTLLFAIQSRGTGL FT VGRLFGPVMCMWFLTLALLGIANIVHAPEVLEAISPTFAIEFVFRHPLMSFYALGSVVL FT AVTGGEALYTDMGHFGRFPIRLAWFGLVLPALLLNYFGQGALLIHDPSAIQNPFFRLGP FT EWMVVPMVALATLATVIASQAVISGAYSVARQAIQLGLLPRMTIVHTSGEEAGQIYVPF FT TNWTLYFAVMALVVGFQSSSNLAAAYGIAVTGTMMIDTILVSFVAALLWRWHPVVVAVV FT IGTLLLLDFAFFAANIIKVAQGGWFPLFIGFISFTVLTTWRRGRALVRKQLKKQAVPLD FT VVLRALGPNVSRARGTAVFLTAATDGVPPALLHNLKHNQTVHQRVILTTVSTAETPYVP FT DSERVHMTDIGDGFHRLIIRYGFMQTPDVPAALSLCKQFGHEFNMMSTSFFLSRETYVP FT SLNPGMALWRERLFTFMTLNATRATTFFKIPTDRVVELGTQLEI" FT misc_feature complement(order(288009..288062,288078..288143, FT 288165..288230,288261..288326,288402..288467, FT 288528..288593,288633..288698,288759..288824, FT 288840..288905,288951..289016,289119..289184, FT 289239..289304)) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(289263..289325) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.959) with cleavage site probability FT 0.433 atresidue 21" FT CDS complement(289586..290425) FT /codon_start=1 FT /transl_table=11 FT /locu |