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EBI DbfetchID BX572601; SV 1; linear; genomic DNA; STD; PRO; 348580 BP. XX AC BX572601; XX DT 09-DEC-2003 (Rel. 78, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 XX KW complete genomes. XX OS Rhodopseudomonas palustris CGA009 OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. XX RN [1] RP 1-348580 RX DOI; 10.1038/nbt923 RX PUBMED; 14704707. RA Larimer F.W., Chain P., Hauser L., Lamerdin J., Malfatti S., Do L., RA Land M.L., Pelletier D.A., Beatty T.J., Lang A.S., Tabita F.R., RA Gibson J.L., Hanson T.E., Torres y Torres J., Peres C., Harrison F.H., RA Gibson J., Harwood C.S.; RT "Complete genome sequence of the metabolically versatile photosynthetic RT bacterium Rhodopseudomonas palustris"; RL Nature Biotech 22(1):55-61(2004). XX RN [2] RP 1-348580 RG Rhodopseudomonas genome consortium RA Larimer F.W., Harwood C.S.; RT ; RL Submitted (24-JUL-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Rhodopseudomonas genome consortium, the DOE RL Joint Genome Institute, Production Genomics Facility, 2800 Mitchell Drive, RL Walnut Creek, CA 94598, USA, and the Genome Analysis Group, Oak Ridge RL National Laboratory, 1060 Commerce Park Drive, Oak Ridge, TN 37831, USA; RL larimerfw@ornl.gov. XX DR EMBL-CON; BX571963. DR RFAM; RF00005; tRNA. XX FH Key Location/Qualifiers FH FT source 1..348580 FT /organism="Rhodopseudomonas palustris CGA009" FT /strain="CGA009" FT /mol_type="genomic DNA" FT /db_xref="taxon:258594" FT CDS 194..3916 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2457" FT /product="hypothetical protein" FT /function="InterPro IPR002048" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR018247" FT /db_xref="UniProtKB/TrEMBL:Q6N706" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27898.1" FT /translation="MPPQERILRDGAHPSREEPAPDARVQREAMAKHPTPDQSDLHAGH FT DCNDPHWHEGHWDHEHEEDARHRARKLLKRRNLGLHRIDDWPSRRTPGAPWLKRTLLTI FT AVVGAVLIAGFAGLWLRLGVGPINVDMVTPWLADAIEENIGQGNTVEIGGTQIERAGRI FT RVALRIRDIVVRDRDHVVVASAPKAEVRLSGGALLTGKLRAESLRLVGAELAIRIDPDG FT QVTVSAGSTDRPLATGIAPSGRPAEFKLPTQPATPDAGAVAPGATAPSGSPTTPPPATD FT TSDTMKGVLAGLEWLDSLSLSGLDGQNLNEIGLKNGNLVVDDQQRGNRWTFENISLSLR FT RPSTGGVALSVGEEGGLKAWSLRVQVGPAHDGVRSVELHANQVPTRTLLLALRLKNLTY FT SADFPLTGDLKGEVGRDGVPTYFRGKLTAGAGTVIDSDTPDYPMAIDQIETSFEWDANR FT RVLIAPFKVLAGPNRVTLLASLEPPNGSVNDWRLGLSGGTIVLPGAQNESPLIFNRIAV FT RVRFDSANRRVLLTQADVSNGEIGVAGSGSIDYSGEPRLTLGLAGTPMSVSALKRMWPA FT LIVPELREWVNDRILAGSIQTIDIAINSPMKNLSRRGPPIPDEGLLVNILGNGAAIRPV FT DGMPVVKDADMRVRVTGRTATVAINQANADTDGGRKVALSDILFEVPDLAPKPAPARIK FT FKLEGPVPAVAEVLASGRLSDAAALPIDPNSSKGNVSAQVALGMPIQRELTKQDTSYSI FT TADLNGFSADKLAMGQKLEANTLKVIANNQGYQVKGDVKINGQAAALDYRKPVDGDADV FT KLQATLDDASRARLGVDLGSGLSGPLGVKLTGKIGDNEQDSKFGIEADLTPVKVDNLLP FT GWSKQPGKPGKATFNVTRKPQSTRLDDVTLEGGGTLIKGSLEVDPDGDLINVNFPVYSP FT SEGDKAMLKADRGPDGVLKAVMRGDVFDGRGFIRSALSGSSTEAKGKSIDFDLDLKFGA FT VAGFSGEALRSLDIKTTRRNGSIRSFTMNGKLGRDTPITADLRGRNQGREVIYLETNDA FT GAFFRFTDSYSKMYGGQLSLAVEPPGGEPREKEGLINVRDFTVKGEAALDRVAAGAPGG FT PPQGLAFSRLRAEFSRQNGTLTIRDGVVKGPTIGATIEGSIDYGANQVRMSGTFVPMYG FT LNNMFGQIPIVGLFLGGGSNEGLIGVTYEVVGTPGKPVLRVNPISAMAPGVLRKIFEFN FT TGRQNNGADFPAPPN" FT misc_feature 491..559 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT terminator complement(3886..3907) FT /note="TransTerm prediction, 98+%" FT CDS complement(4065..4625) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2458" FT /product="putative cytochrome b561" FT /function="InterPro IPR000516 COGs COG3038" FT /db_xref="GOA:Q6N705" FT /db_xref="InterPro:IPR011577" FT /db_xref="UniProtKB/TrEMBL:Q6N705" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27899.1" FT /translation="MTTTTLDTADKGPAQYGALAVLIHWLIFFAVIALFASMNYAHGLE FT KTDPLRRTLYDWHKAVGTAVLGLAVLRILWIKIHGAPDLVPSPRITEVIARISHGLLYL FT LLLAVPITGLGMTLFSGRGVDLLGIPPLAKNDAIAGALHAAHEPLFLLTAIVVLIHVIG FT ALWHQYFRHDATLGRMVPWLRGK" FT misc_feature complement(order(4116..4181,4269..4334,4398..4454, FT 4500..4565)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(4846..6063) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2459" FT /product="putative permease" FT /function="InterPro IPR007114 COGs COG0477" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q6N704" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27900.1" FT /translation="MDHRASRTGLFILGLCFVLSLLGRGLGESFTVFLLPISGSFGWDR FT AEVVSIYSLTALCTGLASPLVGRLFDRSGPRVVYTLGMTLLGGALLIAAYAERLWQLQL FT TVGLCVGLGIAFTGNVPNSILLGRWFGARLPTAMAVVYSAIGAGVLVMLPIAQLLIDRY FT GWREAYLILGGAMLILLVPLSLMPWRRFAAGADAHAQRPAQDADEDGWTLGSAMRHHAF FT WALFATFFFTAIGMYSISAQVVAYLVDAGFTPLQAATAWGFSGVVLVVGMLGVSWLDGV FT IGRRPSILFSYAISITGLVLLWLLQWYPNLLLLGGFVICFGSMIGSRGPLITATAMSIF FT RGRRVGTIYGTISIGSGLGSAFGSWCGGLLHDLTQSYNPVLGFALVSVVLGMIPFLVVP FT ALRERQ" FT misc_feature complement(order(4861..4926,4972..5028,5068..5133, FT 5149..5199,5221..5286,5332..5397,5488..5553,5584..5649, FT 5686..5751,5782..5832,5854..5919,5980..6036)) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(5980..6063) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.601) with cleavage site probability FT 0.299 atresidue 28" FT CDS complement(6148..7404) FT /codon_start=1 FT /transl_table=11 FT /gene="tyrS" FT /locus_tag="RPA2460" FT /product="tyrosyl-tRNA synthetase" FT /function="InterPro IPR002305:IPR002307 COGs COG0162" FT /EC_number="6.1.1.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N703" FT /db_xref="InterPro:IPR002307" FT /db_xref="UniProtKB/Swiss-Prot:Q6N703" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27901.1" FT /translation="MTAFKSDFMNVLQSRGFIHQISDPDSLDALAAKGEVVAYVGYDCT FT AASLHVGHLLSIMMLHWLQATGNKPIALMGGGTTRVGDPSGRDETRKILTYEQIDANKE FT SIKGTFSKFIKFGDGHSDALMADNAEWLTKLNYIEMLREIGRHFSINRMLTMDSVKLRL FT DREQELSFIEFNYMILQSYDFVELARRYKCNLQMGGSDQWGNIVTGVDLGRRMGTHQLH FT ALTCPLLTTASGAKMGKTAAGAVWLNGDMLAPYDYWQYWRNTEDADVGRFLKLFTLLPM FT DEIERLSKLQGAEINDAKKILATEATALMHGREAADKAETTARTTFEQGGTAQDLPSVE FT ISRGELDAGIGVLVAFAEKTGLVASNGEARRQIKAGGLKVNDAPVTDEKMTLTATDLSS FT DGVIKLSMGKKKHVLLRLA" FT CDS 7562..8665 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2461" FT /product="Protein of unknown function UPF0075" FT /function="InterPro IPR005338 COGs COG2377" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N702" FT /db_xref="InterPro:IPR005338" FT /db_xref="UniProtKB/Swiss-Prot:Q6N702" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27902.1" FT /translation="MMMTAIGLMSGTSLDGVDVALIKTDGRRVGALGPSGYRPYTETER FT SLLRQALAEAVQLTARDARPGVLAEAERAVTIAHAEAVAAFVAQNRLSPGSVDIVGFHG FT QTVLHRPAEKLTVQIGDAKALAKAIRIPVVCDFRAADVAAGGQGAPLVPVYHRALAQSL FT GRDGPIGVINVGGVSNVTYIDGTDTLIACDTGPGNALLDDFMFRTLGKPFDCEGRLASQ FT GVIDQAWLTEALQHPFFAKPTPKSLDRNDFANLTLRDWSPADGAATLTAFTARAIAAVQ FT PLLPKPPQSWIVTGGGARNLTLMRMLREALAPASVESADALGWSADAMEAQAFGFLATR FT GLKGLPLSYPATTGVAFPMTGGLLARP" FT CDS complement(8720..9367) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2462" FT /product="conserved unknown protein" FT /function="InterPro IPR000379 COGs COG2945" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q6N701" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27903.1" FT /translation="MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGNMNHPI FT VYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTGELADAASALDWAQTINPEARACWV FT AGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAPAK FT DVNTLVEKLKTQKGIVIDQQTIPGANHFFEDRMEPLMETITSYLDMRLANVR" FT CDS 9605..10777 FT /codon_start=1 FT /transl_table=11 FT /gene="nifS1" FT /locus_tag="RPA2463" FT /product="putative cysteine desulfurase, nifS homolog" FT /function="InterPro IPR000192 COGs COG1104" FT /db_xref="GOA:Q6N700" FT /db_xref="InterPro:IPR016454" FT /db_xref="UniProtKB/TrEMBL:Q6N700" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27904.1" FT /translation="MTANRVYLDWNATTPLRPEAKAAMAAALDVVGNPSSVHAEGRAAR FT GLLEQARAQVAAAVGAAPRDVVFTSGGTEANALALTPGLRIGSEPVECMLVSAVEHASV FT LSGGRFPADRVTQIQVTADGVLDLDHLRALLADGGPALVSVMLANNETGALQPIREVAE FT MVHEAGGVLHVDAIQALGKIPFGIKELGADLVSLSAHKIGGPKGVGALVLSPRLSGPEP FT LLRGGSQELGRRAGTENLIGIAGFGAAAAVAIPAMADDMARIEGLRTRLEAGLRHISPD FT DGMIVSAGAPRLPNTTLFAVPGLRAETAVIGFDLAGIAVSSGSACSSGKVQPSHVLEAM FT GFGPELARSAIRISLGWSSSESDIDRCLQAWRKLAGNLTKRDHETVLERF" FT CDS 10860..12341 FT /codon_start=1 FT /transl_table=11 FT /gene="sufB" FT /locus_tag="RPA2464" FT /product="sufB, needed for fhuF Fe-S center stability" FT /function="InterPro IPR000825 COGs COG0719" FT /db_xref="GOA:Q6N6Z9" FT /db_xref="InterPro:IPR010231" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27905.1" FT /translation="MAAVQETVDRVRQIDVDQYRYGFETLIESEKAPKGLSEDIVRFIS FT AKKNEPDWMLQWRLDAYRRWLTMTEPSWARVSYPKIDFQDLYYYSAPKPKKQVGSLDEI FT DPEILKTYEKLGIPLREVEVLEGVVRPEGERKIAVDAVFDSVSVATTFQAELKKAGVIF FT MPISEAIKHHPELVQKYLGSVVPTSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYF FT RINERNTGQFERTLIIADKGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTV FT QNWYPGNSEGKGGIYNFVTKRGDCRGANSKISWTQVETGSAITWKYPSCILRGDNSRGE FT FYSIAISNGYQQVDSGTKMIHLGSNTTSRIISKGIAAGKSQNTYRGLVTAHRKAKGARN FT FTACDSLLIGDQCGAHTVPYIEAKNASTLFEHEATTSKISEDVLFYCIQRGLSQEEAVG FT LVVNGFVKDVLQQLPMEFAVEAQKLISISLEGSVG" FT CDS 12474..13232 FT /codon_start=1 FT /transl_table=11 FT /gene="sufC" FT /locus_tag="RPA2465" FT /product="sufC, related to ABC transporter ATP-binding FT protein" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG0396" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6Z8" FT /db_xref="InterPro:IPR010230" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27906.1" FT /translation="MAVLLEVKDLQVSVADREILHGLTLTVNEGEVHAIMGPNGSGKST FT LSHVIAGKPGYEVTGGEILFKGENLLEMEPNERAAKGVFLAFQYPVEIPGVATMNFLRT FT ALNSQRKSRGEDELSTPDFLKRVREVSGSLGIPQEMLKRGVNVGFSGGEKKRNEVLQMA FT LFQPSLCILDEMDSGLDIDALRIASEGVNALRAPNRSMVVITHYQRLLDYIVPDVVHVM FT SKGKVVRSGGKELALELEANGYAQYQEAAA" FT CDS 13256..14569 FT /codon_start=1 FT /transl_table=11 FT /gene="sufD" FT /locus_tag="RPA2466" FT /product="sufD, needed for fhuF Fe-S center FT production/stability" FT /function="InterPro IPR000825:IPR003439 COGs COG0719" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6Z7" FT /db_xref="InterPro:IPR011542" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27907.1" FT /translation="MNIAVAKPDKPDTASDNFAAVSARVPGAGKVADTRRQALDTFQRI FT GLPHRRIEDWKYTDLRALMREVLPLAAAPEAAALAQAEAAAKLHAIDGVRRLVLVDGVL FT APGLSELAGLEAGLSIRSLREALQSGDDRVLSLDTADPMVALNTALMTDGLVIEVADGT FT TLARPLHILHIASGGAPAAMFTRSRISLGNAAVATVVESYVAGEGAAAYQVHDSAVITI FT GDHARLDYVRIVEDSREAFNITSATVAVGAHAHFNAFGITTGGLVSRYQAVVTVAGSHS FT EVETNGVNLLNGKQHADTTLVMNHDVPHCVSREGFRAVVDDRGHSVFQGRINVRQAAQQ FT TDAKMMTRALLLSDEAEVDNKPELEIFADDVTCGHGAAVGALDDSLLFYLRARGLPQKE FT AEAMLIQAFVGEAIEAIADDNLRELVTAAAVRWLEARR" FT CDS 14566..15813 FT /codon_start=1 FT /transl_table=11 FT /gene="sufS" FT /locus_tag="RPA2467" FT /product="sufS, putative selenosysteine lyase" FT /function="InterPro IPR000192 COGs COG0520" FT /db_xref="GOA:Q6N6Z6" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27908.1" FT /translation="MSTHPAVRNGSYDVDLVREDFPALALEVYGKKLVYLDNAASAQKP FT RQVLTRMTQAYESEYANVHRGLHYLANAATEAYEGGRTRVQHLLNAKRPEEIIFTRNAT FT EAINLVASSWGATNIGEGDEIVLSIMEHHSNIVPWHFLRERQGAVLKWAPVDDEGNFLI FT DEFEKLLTAKTKLVAITQMSNALGTVVPVKEVVKIAHARGIPVLVDGSQAAVHLAIDVQ FT DIDCDFYVMTGHKIYGPTGIGALYGKYDVLAKMRPYNGGGEMIREVAQDWVTYGDPPHR FT FEAGTPAIVEAVGLGAAIDYVNSIGKERIAAHEHDLLTYAEERLREINALRIIGSAKGK FT GPVISFEMKGAHPHDVATVIDRQGIAVRAGTHCVMPLLERFQVTATCRASFGMYNTREE FT VDQLVSALIKARDLFA" FT CDS 15810..16178 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2468" FT /product="DUF59" FT /function="InterPro IPR002744 COGs COG2151" FT /db_xref="InterPro:IPR014291" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27909.1" FT /translation="MTDTIEAKANMQTVSALPPEETERLGTEIVAALKTVFDPEIPADI FT YELGLIYKVEIKDDRTVDIDMTLTTPNCPAAAELPTMVENAVASVPGVGVVNVNIVWEP FT PWTPERMSDEARLVLNMW" FT CDS 16207..16602 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2469" FT /product="putative lactoylglutathione lyase" FT /function="InterPro IPR004360 COGs COG0346" FT /db_xref="GOA:Q6N6Z4" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27910.1" FT /translation="MIETALYVDDLDRARSFYQGVLMLSPMTSDQRFCAFDVGGRSVLL FT LFKRGSTLETVNLPGGTIPPHDGNGPIHIGLSVERDQLGEWEARLTEHGVAIEGRTEWP FT RGGSSIYFRDPDRHLLELVTPGVWPIH" FT CDS 16732..17103 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2470" FT /product="Protein of unknown function, HesB/YadR/YfhF" FT /function="InterPro IPR000361 COGs COG0316" FT /db_xref="GOA:Q6N6Z3" FT /db_xref="InterPro:IPR016092" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27911.1" FT /translation="MATARPRPQVMRLTDAAAGRVKELMVRADSEILGLRVGIKNGGCA FT GQSYTVEYAHDIKPNDEVIEDKGVKILVDPKAVLFLLGTEMDYKADRMQAQFVFNNPNQ FT ISACGCGESVELKPASIDG" FT CDS 17258..19222 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2471" FT /product="unknown protein" FT /function="InterPro IPR006311" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27912.1" FT /translation="MKRRDFLLGAAAIGLGGPLLAKAAISSLHAQPAAPKGAKIAKVAI FT FPAIGFSRVGNAEDWFLAPEVPGLLDEPEGGFKDKQGRIKKQVQRFRLFGYDDQGRVVR FT ELDGTDGVTWSVHVANTKAAWYGFVNAMDRGDTAPGVPGAQRNAFVAADKREAMLCIDA FT GKLEISGASTNPKGGDDKYRMKGRFWQTLDVSLGHLRTDDKGRLLVFAADGVSRTALPQ FT NPVRDFTNNDGWHDDWADGWVKATVTVDGQKLDCDPAWVVCCGPKFAPQLEPIVTLYDA FT AREAMVALGQMHSPTDKVSFRRDVLPILRRAGAMQWVATASFLGAAWNDIGDLSNPATI FT ETLAKPSADAKAERKKVFDAFRKPDGSDQRGYAIPIMLGDGVNYQDSPHAWLALTQTQY FT RVLELWADGKFEADYADKSADSVRTLDDLPIELRPEAMTRAALDACSGGAFHPGVEITW FT PIRHKELYRGPNETKLPFRLALSNRKNLAQDVGLQLNPVNVFAGNPDKLDQGRPIGPQA FT PGDLTRWMGVPWQGDAFSCQAVLTASGFPTPVWWPALLPVDVLPEAFYQQMMRTDLTEE FT ERLRFYHTRVPWARGAAGIGLHVEAGYTDGLRRMIELWTQMGVVVRRPGPKGLPGVPDQ FT LYVEVQRGSMDIAAQTLSR" FT sig_peptide 17258..17350 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.483 atresidue 31" FT CDS 19228..20328 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2472" FT /product="hypothetical protein" FT /function="InterPro IPR000104" FT /db_xref="GOA:Q6N6Z1" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27913.1" FT /translation="MGRIAVIGAGVAALAAARSLVLAGRRPLLIAPDREVISRGETLSP FT AAAALLDRLQWADLLDADSALPSEGRFSVWGDATLRQAAQGVGAWHLDRARFERQMRAK FT LDNDAIECHPIIVTMLVHHCDGVVLELGDGRVVFADAAIDCSGRAAVSSGAAAGRRRTD FT RLVAVWRVLDLPDDTEPAAATLIEAVPLGWWYMAPLPGDRMMLGLFTDTDLVPPGAAQD FT GATWTGLAASTVAIAPRLRSLGLDVSAAREPPQVAPAATVTASRLIEGRILRAGDAAAA FT LDPLGANGLATALWSGMAAAEAALTLTEGEPERADAYERDYLQGIAQHLVSQQAMYAAE FT PRFADAPFWQRRRAVVSSHPQKETLP" FT sig_peptide 19228..19299 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.981) with cleavage site probability FT 0.658 atresidue 24" FT CDS 20325..20798 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2473" FT /product="possible translation initiation inhibitor" FT /function="InterPro IPR006175 COGs COG0251" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR006175" FT /db_xref="UniProtKB/TrEMBL:Q6N6Z0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27914.1" FT /translation="MTNSLRTLLAAAAIAVAVPALAAAETSAVKIIAPTDKTITPSGTW FT SIGARAGDFVFIGGMRGTDRVTGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTV FT FVTDVAKYRPVVNKVQKDIWGDGPYPPRTVLQVPALDQGDIAEIDGTFYAPAK" FT sig_peptide 20325..20393 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.908 atresidue 23" FT misc_feature 20343..20411 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 20884..22554 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2474" FT /product="possible o-linked GlcNac transferase" FT /function="InterPro IPR001440 COGs COG0457" FT /db_xref="GOA:Q6N6Y9" FT /db_xref="InterPro:IPR001440" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27915.1" FT /translation="MARPHFALTSVFLASSVSLSAFGFSLPARAQSEDVAQKCQQPIKS FT VEASFAACTAAIDTGALSGKALAGAYIKRGFLRTRQRDLVGAEADLDAAIKANPDAADA FT YTTRANFWNVSGKPERALADADQAIKLDPNLPLAHFVRGSAELKLGHDDRAIADYSRAI FT ELRPKESGEVYAVRGFAYHRKGDDIRAVADYTEALKAAPEDVGTLLNRGDARRNLRDTA FT GAAADYSEAIKLAPGNAGGFKGRGFIRLLTQDTGGAVADFTEAIRLSPSESGLYLNRAS FT ALGLQNQSLLALADEDMAIRLEPQHPLAYVNRAETLKLLGDKVAARASVTKALQLAPGF FT PPAVEVLKKLGEPKRSKEPSSEAAQEAYRRCTFPVTDLGPGEEGIKQIIKVCTLLVTAQ FT GGSDANRALVHLQRGSMYRRQGDYQHALIDFSESLRYDPESALAYTGRGNAYRGLKLLD FT QALADHTEAIRLDPKYATAYNNRGNVWRDKNDLAKAIADFDRAIAISPNYAMAYFNRGN FT SRLESGDKEGAVADFQQTVKLSPQFKEAAERLQELGVRM" FT sig_peptide 20884..20976 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.957 atresidue 31" FT CDS 22579..23175 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2475" FT /product="TfoX, N-terminal" FT /function="InterPro IPR007076" FT /db_xref="InterPro:IPR007076" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27916.1" FT /translation="MPSRSWRLLLSWDAASAALFASRSNLMSHAMDREFLADLFAPFGP FT VTIRRMFSGFGISADGVTFALVIRDAIYLRTDADGAARFEAEGSRPFRYDTRTKTVTVG FT SYWLLPERLLDDPDELAEWARSAHAAAERAALSKASKTRRGPKGKTAADSSKAPKRTKP FT SATQRKVKTAVKTAASAKKAKTTKAAAAKRSRAAR" FT sig_peptide 22579..22671 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.966) with cleavage site probability FT 0.819 atresidue 31" FT CDS complement(23184..24251) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2476" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160 COGs COG2199" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27917.1" FT /translation="MAALQDDHDRTMAYAEVALSQIKTLRQGAVPRNYEIWYVYATGHN FT PELNKAINDTLAERGNLTDADLDQLHDTYLTQGRTTDRIDRIGARVANEIDDIMALLAE FT TLGNTASFGDDLRGESQKLSLATDHDQIKAIVERLVVTTREMQQANSALEERLSTSKQE FT IANLQVSLDAIRAESLTDPLTGLGNRKHFDRTVQEAIRNAGASQQPLSLLMMDIDHFKS FT FNDTYGHLTGDQVLRLVGMTLKQSIKGQDFTARYGGEEFAVVLPNTPMRQAIIVADNIR FT RLVMSKELKKKSTGEILGRVTLSAGVSTLKPNDDAEALIERADACLYAAKRNGRNRVIC FT ETDPEFAGITQAAVA" FT CDS complement(24350..25768) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2477" FT /product="possible ATP-dependent RNA helicase" FT /function="InterPro IPR000629:IPR001410:IPR001650:IPR001687 FT COGs COG0513" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6Y6" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27918.1" FT /translation="MSFSNLGLSEKVQAAVAAAGYVSPTPIQQQAIPHVLARKDVLGIA FT QTGTGKTAAFVLPMLTMLEKGRARARMPRTLILEPTRELAAQVKEQFDKYGAGQKLNVA FT LLIGGVSFGDQDLKLTRGVDVLIATPGRLLDHTERGGLLLTGVEMLIIDEADRMLDMGF FT IPDIERICKLVPFTRQTLFFTATMPTEIRRITETFLHNPEKIEVSKPASTAVTVTQSQV FT PCGREPHEKRETLRRLIRGATDLKNAIIFCNRKREVALLAKSLQRHGFSVGALHGDMDQ FT TARTAALEAFRKGDLPILVASDVAARGLDIPEVSHVFNFDVPHHPDDYVHRIGRTGRAG FT RTGTAVTIVAPSDQKSMAAVEKLIGQAISRAEVGPSVESEAANTEAEAERPSRSRRAAP FT EARQREPRREPREQRERKPRREPRSPASTTGTTAPPTAHASFGSPPPARDTSSEAGDHS FT HLPAFLLRPVRARG" FT CDS complement(26042..27133) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2478" FT /product="probable transcriptional regulator, AraC family" FT /function="InterPro IPR000005:IPR000843 COGs COG2207" FT /db_xref="GOA:Q6N6Y5" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27919.1" FT /translation="MGRQSCHNGRNNETIHWSQRERQMNSEDIVSDLDRELLQDFPLVR FT SQDPIEARDILRRYGVDMIVSNPSDFFMRTNLAELPHIGLYFVHSSGATRLVIPERETA FT LVHLSLQGDALLSSGTRRVELSQGSACICSPGVSAQLEFGQNSRQLLLRMPQRVLERAI FT AALVGFKPRQPILFEPAICNDEPRYLGFRELTTLLASRLDSSYSVWPKNVLLHLEQSCI FT TALLYCSRHNLGHLLENANAVNDDVPRYVRTAEHYVESHRDEDISIEDVARIAGVSIST FT LTRAFLKHRGCSPSAYVKRVKLNHAKRLLETGAATTLIGVALRCGFANPSRFSQDYREA FT FGESPTETLRRCRPNRGPETQKH" FT CDS 27336..29075 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2479" FT /product="methyl-accepting chemotaxis receptor/sensory FT transducer" FT /function="InterPro IPR000727:IPR003660:IPR004089 COGs FT COG0840" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6Y4" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27920.1" FT /translation="MRERLVRRVGTLRVGVPAMQLSNVKLLYKIIGCFLLLSVVVGFGI FT WFAASKMEEIDRTYASMLENEVQGMKANFRANARLFNFGRMSWRIIAETDPAEMQKLSR FT EIAANHKEFSDFVAQAKKGLPQFAADFDRIDRMFDDMMTKEYPPLEQATMANNNELAVR FT LAKDIAKHNQSVRDVQFAISNKLDKELSDRSHAASADVASTIKLTILVVGGGFLAVLAL FT AFAIVQFGIARPIGRLVGDLQAMARGHDVEVSGTERGDEIGQTANAVNDIKLMLAEKAR FT QEAAGKAEQDRIIAVQRKQEMEKLAHHFEAAVGEVIRAVSSASTELEASATTLTSSAQR FT AQEVTTSVAAASEQASANVQSVASATEEMASSVTEISRQVQDSARIAHEAVTQAQRTNE FT RVGELSQAATRIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAE FT QTAKATGEISQHIGGIQAATHESVNAIREIGSTISKMSEIASTIASAVEEQGAATQEIS FT RNVQQAAMGTQQVSASVVDVQRGANETGSASTQVLSAAQSLANDSNRLRMEVGKFLETV FT RAA" FT misc_feature order(27411..27479,27960..28028) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 29253..30758 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2480" FT /product="unknown protein" FT /function="InterPro IPR001309" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6Y3" FT /db_xref="InterPro:IPR011600" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27921.1" FT /translation="MRSIGRACTRHGAALFAAVACVLALLVAGPASAAKRVALVIGNDD FT YRNVPRLQKAVNDARTIGDALKTLGFQVMVAENQTRAAFSQSLLAFDTTIEPGDTAFFF FT YAGHGFEIAGQNYLLPIDVPAATEGQEELVRDASIMADRIIDRLQNRGARTAILVLDAC FT RNNPFERRGVRALAGRGGLAPMTTLPEGVFSIFSAGPRQTALDRLSDTDSNPNSVFTRV FT FVKQLLDPGENLVQVAQRTRRAVSEMADTVGHKQVPVYFDQMVDDVFLNGRPQPSAAAT FT EPSQKVAALPPVAPLKPPASEALNAPIASFSRHNGGWTVSFSIADPTLGISWRMGEGAF FT RETGFMDALDPRTRKRMPNPSIQLPADAPAGTIELRYIDAQGEMQGPFPIKFEPEAALI FT RDQRKILDMTATSWLSFRDYNGLLVYYTHLMSYRCAIREVRIGIDSAVPDKVLKMPPCD FT MRDPIAIPSSAQPYLKLAPNVTSVSVELTYRDGSVSEIKTFRR" FT sig_peptide 29253..29354 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.992 atresidue 34" FT misc_feature 29286..29354 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(30813..31649) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2481" FT /product="possible transcriptional regulator, XRE family" FT /function="InterPro IPR001387 COGs COG1396" FT /db_xref="GOA:Q6N6Y2" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27922.1" FT /translation="MTPDQNALGSYLRSRRTRLDPAALGFAVGRRRTPGLRREEVAQRA FT NISPTWYTWLEQGRGGAPSAAVLDRIAKGLMLTEPEREHLFMLGLGRPPEVRYTPADGI FT SPRLQRVLDAMPLSPAIIKTATWDVVGWNKAAAALLTDYSKLPREQRNILRLLFGNARK FT RARQEDWSSVARFVVGAFRADVARAGAAGTEEVSRLVDELCRLSAEFAALWQDNDVVAH FT GEGVKCIKHPEAGRLDLEFSSFAVEGRPELGMIVYNPASPQVAERVRALIEAKGAS" FT CDS 31748..32653 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2482" FT /product="probable epimerase/dehydratase" FT /function="COGs COG0451" FT /db_xref="GOA:Q6N6Y1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27923.1" FT /translation="MRVFLTGATGFVGSHVLKELLAAGHQVTGLTRSDAGGRWLVQAGA FT SVHRGTLEDAGSLARGAEQADAVIHTAFDHVFSRYLENCAKDARVISAMAEVLKGSNRP FT LIITSATGIGAPGAGLPAVEEVVDWAHALPRIASERAGREAADKGVSVAVVRLPQVHDT FT EKQGLISPLIDIGRAKGVSAYVGDGSNHWSAVHIDDAARLYRLALEHHEAGARYHAVAE FT EGVSMRQIAETIGAGLGVPVLALQADEVVGHFGWLAPFMAMDMRASSAATRRRLNWTPT FT GPDLLTDLKAMDYRKLRTAS" FT CDS complement(32689..33066) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2483" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6Y0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27924.1" FT /translation="MRVKRSNPCPCTELNCFASLAMTNSFLQQSSMLQQSARARRPTPA FT SNRAILLEHAGQTVPNSSMRTLFLVIGVIALLVGLVWTGQGAGLIQWPAQSFMINQSQW FT MWYGASTAFGGLLLIFISRKA" FT misc_feature complement(order(32704..32754,32800..32865)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(33097..33567) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2484" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6X9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27925.1" FT /translation="MMRPWILAITAAAMLGPSLAQAQKADGWQRYTIRDSGASVAVPTA FT IFSDDGGAAQDGPGRRFVTSDGRADLTVQTVANPSGTSPAAFLAAREPPSGIIYRRVTP FT RFFVVSSIRDDRIWYNRCNRAAGVMHCVLINYPAAEKRKWDAIVTRISWSLR" FT sig_peptide complement(33499..33567) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.846 atresidue 23" FT CDS 33889..34611 FT /codon_start=1 FT /transl_table=11 FT /gene="aqpZ" FT /locus_tag="RPA2485" FT /product="aquaporin Z (water channel)" FT /function="InterPro IPR000425 COGs COG0580" FT /note="Citation: Calamita et al. (1995) J. Biol. Chem. FT 270:29063-29066" FT /db_xref="GOA:P60925" FT /db_xref="InterPro:IPR000425" FT /db_xref="UniProtKB/Swiss-Prot:P60925" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27926.1" FT /translation="MNTNKYLAEMIGTFWLTFAGCGSAVIAAGFPQVGIGLVGVSLAFG FT LSVVTMAYAIGHISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIA FT SGAAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGSTHGKAPAGFAP FT LAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGWAIGQLWLFWVAPLLGGVLGGVI FT YRVLSPEPTGVVEGVKAR" FT sig_peptide 33889..33972 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.952) with cleavage site probability FT 0.916 atresidue 28" FT misc_feature order(33907..33975,33985..34053,34132..34200,34273..34341, FT 34360..34428,34486..34554) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(34657..36708) FT /codon_start=1 FT /transl_table=11 FT /gene="parE" FT /locus_tag="RPA2486" FT /product="DNA topoisomerase" FT /function="InterPro FT IPR001241:IPR002288:IPR003594:IPR005737:IPR006171 COGs FT COG0187" FT /EC_number="5.99.1.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6X8" FT /db_xref="HSSP:1AJ6" FT /db_xref="InterPro:IPR006171" FT /db_xref="UniProtKB/TrEMBL:Q6N6X8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27927.1" FT /translation="MAKALKASSKSKSGDDLFEGAPKSAAPKAPAKPSGAEDGYTAADI FT EVLEGLEPVRRRPGMYIGGTDEKALHHLFAEVIDNSMDEALAGHATFIEVELTADGFLT FT VSDNGRGIPVDPHPKFPKKSALEVIMCTLHAGGKFDSKVYETSGGLHGVGVSVVNALSS FT RLEVEVARGQQLHRMVFERGHPKGKLESLGKVNNRRGTRVRFKPDTEIFGAKAAFKPQR FT LFKMARSKAYLFGGVKIRWKCDPELLKGIEDVPAEDEFHFPGGLKDFLGAAIHNDTLVH FT PDIFAGKSGRNGAHGACEWAAAWTADADGFLSSYCNTVPTPDGGTHESGLRSALLRGLK FT DHAERAGQGKRASSITSEDVMVGAAIMLSVFVREPEFQGQTKDRLATAEAQKIVEQAIK FT DPFDHWLSGNPVQANKLLDFVIERAEERLRRRQEKEISRKTAVKKLRLPGKLADCTSTA FT AEGSELFIVEGDSAGGSAKQARDRSTQAVLPLRGKILNVASAGKDKVVANAQLSDLIQA FT LGVSTGVNYREEDLRYSRIIIMTDADVDGAHIASLLITFFYRQMPKLIDEGHLYLAVPP FT LYRLTHGAKTVYARDDAHKEELLKKEFNANAKVEVGRFKGLGEMMPAQLKETTMDPAKR FT TMLRVVLLPDDRDGTANSVERLMGTKAEARFAFISEKAEFASDELLDV" FT CDS 37166..37696 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2487" FT /product="possible DedA family. Putative integral membrane FT protein." FT /function="InterPro IPR000252 COGs COG0586" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:Q6N6X7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27928.1" FT /translation="MEAYIHDIAEFVRQHEAWAAPVVLALAFGESLAFVSLLIPAWGAL FT VAIGALIGVSGLSFWPVWIAGGVGAALGDWVSYWFGYRYKDNVAQIWPLSKYPGLLRRG FT EDFVRKWGVPSIFIGRFFGPLRASVPLAAGIFEMPFWPFQIANVVSALVWSAVLLLFGD FT GLSIGLGWMLRSV" FT misc_feature order(37259..37327,37340..37408,37514..37573,37616..37684) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 37782..38771 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2488" FT /product="conserved unknown protein" FT /function="InterPro IPR006311 COGs COG0491" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6X6" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q6N6X6" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27929.1" FT /translation="MDLTRRHALTATAALAAAPLLRSAPAQAAVPVADKQAPSYYRYRV FT GDAQVNVVSDGISTFPLSDGFVLNVMKDEVGEALEAAFLPKDKVSIQFAPLVINTGGKL FT VVLDTGNGPGAFASSKGNVGQFAGNMAAAGFDAKAVDLVVISHFHGDHINGLLDASGKP FT AFPNAEVLVPAAEWKYFMDDGEMSRAPSGRMQSVFQTVRKVFDTGLNKKVTPYEWGKDV FT APGLLAVETRGHTPGHTSFVLSSGADKVFIQSDVTNVPALFVTHPGWHLMFDQDPAMAE FT TTRRKTYDMLAAEKMRVQGFHFPFPAMGHIEKTADGYRMVPSPWNPVI" FT sig_peptide 37782..37868 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.997 atresidue 29" FT CDS complement(38918..39463) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2489" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR018656" FT /db_xref="UniProtKB/TrEMBL:Q6N6X5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27930.1" FT /translation="MTRTAFPFATQDVSALARALNRELDAQGHKLGHVEMLNLLARSAG FT YRNFQHFRAQFDAEERLLRPPEPEPVADLQKVAQATRYFDASGVLTRWPKKASHRLLCL FT WVMWSRVPAGRELSEKQFNELLLGHHGFGDHALLRRMMCDYGLMTRTRDGRVYRRVEQK FT PPPEGVALIRHLAPRLAA" FT CDS 39912..40577 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2490" FT /product="conserved hypothetical protein" FT /function="COGs COG2808" FT /note="Citation: Honjo et al. (1990) J. Bact. FT 172:1783-1790." FT /db_xref="InterPro:IPR007396" FT /db_xref="UniProtKB/TrEMBL:Q6N6X4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27931.1" FT /translation="MYAPPQFKPDRSACLAFAAARGFGLACAHDAAGPIASPLPFAIQY FT ASDGTPLLSFHVARNNPLARCADARTPWLMAVTAGHAYVSADWYASPDQVPTWLYRSVQ FT LTGPAAVMSASELDAQLDDVSAVFESALAPKRPWTMAKMAAGRRNAMKQAIVGVMMRVD FT AVTGSFKLNQHKSDADHVAVAAALARQPDAGSQEIAAEMVALRPHLDYTVPAFAGEPA" FT sig_peptide 39912..39998 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.745) with cleavage site probability FT 0.637 atresidue 29" FT CDS 40592..41587 FT /codon_start=1 FT /transl_table=11 FT /gene="argC" FT /locus_tag="RPA2491" FT /product="N-acetylglutamate semialdehyde dehydrogenase" FT /function="InterPro IPR000706:IPR001687 COGs COG0002" FT /EC_number="1.2.1.38" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6X3" FT /db_xref="InterPro:IPR000534" FT /db_xref="UniProtKB/TrEMBL:Q6N6X3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27932.1" FT /translation="MTLTDSTIPGQAKAASGKPVVFIDGAAGTTGLGIRERLARHGQVT FT VKDIPDDKRKDPGAKRALMAEVDLVILCLPDDAAKETVALIDDLGASGPKVLDASTAFR FT VAPDWVYGFAELAPDQADNIRAAKKVANPGCYPTGGIALLRPLVDAGLLPADYPVTINA FT VSGYSGGGKSMIAAYEAGTAPAFELYGLGFAHKHLPETQKYAGLSRRPIFIPSVGNFRQ FT GMLVSVPLHLDTLPGKPAAADLHAALTQRYAGSTYVSVPPLDAAPYAAGRIEPEALNDT FT NRLELYVFGSDAHRQAVLVARLDNLGKGASGAAVQNMRLMLGLADTGSVD" FT terminator 41606..41637 FT /note="TransTerm prediction, 98+%" FT CDS 41643..42254 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2492" FT /product="Conserved hypothetical protein" FT /function="InterPro IPR000051:IPR001601 COGs COG0500" FT /db_xref="InterPro:IPR013217" FT /db_xref="PDB:3E23" FT /db_xref="UniProtKB/TrEMBL:Q6N6X2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27933.1" FT /translation="MEPDMTQAFDDDTLRFYRGNATAYAERQPRSATLTKFLGELPAGA FT KILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYD FT AVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEW FT LRARYAEAGTWASVAVESSEGKGFDQELAQFLHVSVRKPE" FT CDS 42509..44305 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2493" FT /product="possible P-methylase" FT /function="InterPro IPR006638 COGs COG1032" FT /EC_number="2.1.1.-" FT /db_xref="GOA:Q6N6X1" FT /db_xref="InterPro:IPR005839" FT /db_xref="UniProtKB/TrEMBL:Q6N6X1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27934.1" FT /translation="MASVQPAAQPSKRFQIALIKPSHYDDDGYVIQWFRSFIPSNSLAV FT VYSLVEDARQRRVLGDVEIDITATDEINTRTRIPQIIERFRAHDFFGLVFIVGVQSNQF FT PRAIDIARPLRAAGVPVAIGGFHVSGCIAMLPGIQPDLQEALDLGVTLYAGELEGRCDE FT LLRDAAGGALKPLYNYLNDLPCLEGVPTPVLPRKFLKGTFSLQTSFDAGRGCPYQCSFC FT TIINVQGRKSRGRSADDIERLVRANMAQGVNWFFMTDDNFARNKDWEVILDRLAALRRE FT FAATGQKDIKLVIQVDTLCHKIDGFIEKARAAGVVRTFLGLESINPQNLASAKKRQNKI FT TEYRQMLLAWKKAGVITYAGYILGFPHDTPESIAEDIAIIQKELPLDILEFFCLTPLPG FT SEDHQRLFQQGVAMDSDLNRFDIEHVVTPHPKMSRQEWQGAYLKAWELYYSAEHIERMM FT RRAAATGVGVSRLASMIFLFSSMVRIERVHPLQGGIIRLKYRLDRRPTLPVEPALVFYP FT KLIAEGARKLVQNVRHWFWIDGLRRKIRSDPNRLSYTDTAITPVGDHEVEELELFTHTQ FT AAQDAVEHIRKINQLTHAKSVA" FT CDS 44540..44902 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2494" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6X0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27935.1" FT /translation="MTVAPVLVILSAATALGLYLGLLYLRGDRKQGLVALHMLLGFGGL FT ETLVMLLHGTPDGAATTDSVSFGKIAAGLFAVSAFSGFIAALARRSPVGANVLLGTHVT FT VGLAGFALLLAWVSGT" FT misc_feature order(44549..44617,44636..44704,44747..44803,44822..44890) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(44907..45305) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2495" FT /product="possible translation initiation inhibitor" FT /function="InterPro IPR006175 COGs COG0251" FT /db_xref="InterPro:IPR006175" FT /db_xref="UniProtKB/TrEMBL:Q6N6W9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27936.1" FT /translation="MSKSEVIFPAGRQALYEKHRYSAAIRSGDLLFVSGQVGSREDGSP FT EPQFEAQVQLAFDNLASVLKAAGCTFADIVDVTSFHTDPATQLDTVLAVKNRAFPQQPY FT PNWTAVGVTWLAGFDFEIKVIARIPTGT" FT CDS complement(45652..46350) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2496" FT /product="transcriptional regulator, GntR family" FT /function="InterPro IPR000485:IPR000524 COGs COG1802" FT /db_xref="GOA:Q6N6W8" FT /db_xref="InterPro:IPR000524" FT /db_xref="UniProtKB/TrEMBL:Q6N6W8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27937.1" FT /translation="MRKRGQPTTVRQHVLLDLRTKILQGRYPAGTRLRQEEIARQLDVS FT TTPVREAFRDLLSEGLISLDARRGAVVRGLTLDDVQEIYQMRMRLEPLLAARTFDRVTE FT DDLAHAEACHRKMCGKVSAQSWAGLNEEFHAALTGNTTSGRLGSLVYNLAHAASPYVVL FT SLFADPDIRDMNNRDHAELLALYQSRDRDGVVATTERHLAQTLRLIEQEAQLKTAPSPA FT DDSELLSAAP" FT CDS 46661..47449 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2497" FT /product="putative anion ABC transporter, ATP-binding FT protein" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1116" FT /db_xref="GOA:Q6N6W7" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N6W7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27938.1" FT /translation="MAEPQIQLSVRDVRKVFPGKGGAVPVLDGLSFDIYERDFVSIIGP FT SGCGKTTIFNVIAGLLNADSGSLIYRGEQVSSLRGRIGYMMQKDLLFPWRTVLENVLLG FT LRVRGVADAEALDTAREYLSTFGLSGFEKAYPKTLSGGMRQRVALIRTLIMDPDILLLD FT EPFSALDYQTRLYLEGVLMEAVETFNKTVILITHDVDEAVALSKRVVALSGRPTRVKNV FT HHIDIERTGPVEARSDHRFSDYFHMLCGELDIQTRKVKSN" FT CDS 47449..48327 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2498" FT /product="possible ABC transporter, permease protein" FT /function="InterPro IPR000515 COGs COG0600" FT /db_xref="GOA:Q6N6W6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6N6W6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27939.1" FT /translation="MTSATDVASRPGGTAIRSNRETISLAQRLVVTFDTHLGRTALQAL FT AVVAFFLLWELGVRMGWISEFLVGKPSGIWARFETQLLDGSLFVDSGYTLYEALIGFVV FT GTIVGSVLGLAMWYSIFVARMVEPFIVALNSVPKIALAPVILLWFGTGLLSKVVLVVSM FT TALVALIAAYQAAKDSDKDLQSLMLSMGGSKHQIFYSVVVPSSLPAIIATFRINIGFAL FT VGAVVGEFISSKRGLGHLVYNASSLYDLNSVWVGLFVLMFMGFVLYHAIDALERYLLPW FT KQDTGHVRIQA" FT misc_feature order(47569..47637,47743..47811,47836..47904,47917..47976, FT 48037..48105,48202..48261) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 48393..49370 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2499" FT /product="possible ABC transporter, periplasmic protein" FT /function="InterPro IPR003439 COGs COG0715" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:Q6N6W5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27940.1" FT /translation="MRSIGRVVGAATLVASLAVSTAVPTAAMAKQVKISQAFQSMLYLP FT FYVALDKGFFKQQGLDVDKETAGSPTTALSAVLSGSAAFSIHGPEWTAIANSKGADVGI FT ICNVVNGAAVWVATTPDFKYDTLQDLKGQKVVAGLMPTTSTSLFMKLLKDNGLKPDSDV FT DLLQVQIGSEPGPFLGGQAKVAVLYEPGLDQVVAKGMKVAIGFPKAYGPYAFSSITARK FT NVDPMDAQAVVNAMELALRFMKNNPDEAVSIAQKEFPTLDPKIVEAAVRRMIAENVYPS FT SVQTTQQAYETAMQTQIALGNLKQAPKYEDFVIQDYVKPALALK" FT sig_peptide 48393..48482 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.905 atresidue 30" FT misc_feature 48411..48479 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 49441..50718 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2500" FT /product="possible amidase" FT /function="InterPro IPR000120:IPR001687 COGs COG0154" FT /EC_number="6.3.5.-" FT /db_xref="GOA:Q6N6W4" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q6N6W4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27941.1" FT /translation="MSYPLGLLAVHRAFREGTLSPADYIASCTQRADEVEPWLKAFCDR FT LPGEQLTGGEGPLAGIPIGIKDIIATAGIRTTNGSRVYADHVPDQDAPIVARIKQLGGI FT VFGKTVSTEFAWRCPGPTVNPNNPQHTPGGSSSGSAAAVAAGIVPMALGTQTVGSVVRP FT AAYCGIVGFKPSFGAIVRDGVHPLAQSLDHVGFLTRSVEDAAFAFGLLADGADAGAAAQ FT AVAGDVLPVVSSLRLGVVRPPIWDRVSAEQNQAFETALETLRRGGATIVPLELPDRYWK FT GFEAAEIILAAEAAAIFNGLVTQHPDLTSPQLKELVAAGNAISAPRYIEARQLQASLQQ FT EFPQHLSGLDGILTVPAPGEAPEGLAYTGDASFCALWTMLGVPALTMPIARSARGLPLG FT LQVIGGFGEDAKLLRTARVVEAALAN" FT CDS complement(50760..52565) FT /codon_start=1 FT /transl_table=11 FT /gene="phbC" FT /locus_tag="RPA2501" FT /product="poly-beta-hydroxybutyrate synthase" FT /function="InterPro IPR000073 COGs COG3243" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6W3" FT /db_xref="InterPro:IPR010963" FT /db_xref="UniProtKB/TrEMBL:Q6N6W3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27942.1" FT /translation="MTDMLAEPQAAPKFDPDAFARNLAQAMETGSQALATMMKSQNGAV FT PPDGHPPAGLTEMVKSFSTVANYWLSDQARSNELQQRLGKSYLELWGAASKRLAGEQAE FT PAIAPSPRDKRFASPEWKANAFYDFLMQAYLLTTQWADELVKNAEIDPHTKRKAAFYVQ FT QLTTALAPSNFVMTNPELTRQTLEASGDNLVRGMKMLADDIQSGRGHLKIRQSDPAGLE FT VGVNMAVTPGKVIFQNEIMQLIQYEPATATVQRTPLLIVPPWINKYYILDLKPEKSFIK FT WCVDQGLTVFVISWVNPDKSLADKDFADYMKLGPLTAMDVVEKVTGEMKVHTLGYCVGG FT TLLASTLAWLAERRRVRVTSATFLTTQVDFTHAGDLMVFVDEEQISAVEREMKVTGVLE FT GAKMAMAFNMLRPNDLIWSYVVNNYLKGQPPQAFDLLHWNSDATRMPAANHSYYLRNCY FT LDNKLSAGTMVLDNTTLDLTKVKVPIYNLATREDHIAPAESVLYGSQFFGGPVKFVLSG FT SGHIAGVINPPAANKYQFWTNPDIFAGSVANWLNGAEEHKGSWWPDWRAWIGQFDDEQV FT PARAIGNEAYPPLEDAPGSYVKVRS" FT CDS 52892..53197 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2502" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6W2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27943.1" FT /translation="MRAAVAVALVVAGCALGGCSVSLSDMPLLGSSDAPAKPKEADAFP FT AVNDLPANREEAVLAPSERNKIEQELIAARERQANANAGAAAPAAGTAAARTAASR" FT sig_peptide 52892..52966 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.990) with cleavage site probability FT 0.755 atresidue 25" FT misc_feature 52910..52978 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 53382..54602 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2503" FT /product="possible aminotransferase" FT /function="InterPro IPR004838:IPR004839 COGs COG0436" FT /EC_number="2.6.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6W1" FT /db_xref="InterPro:IPR004839" FT /db_xref="UniProtKB/TrEMBL:Q6N6W1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27944.1" FT /translation="MEEFYRIRRLPPYVFEQVNRAKAAARNAGADIIDLGMGNPDLPAP FT PHVLEKLKDTLGKPRTDRYSASRGITGLRRAQAAYYDRRFGVKLNPDTQVVATLGSKEG FT FANVAQAITAPGDVVLCPNPSYPIHAFGFLMAGGVIRSVPSEPTPDFFAAAERAIIHSI FT PKPIALIACYPSNPTAYVASLDFYKDLVAFAKKHEIMILSDLAYAEVYFDDNNPPPSVL FT QVPGAMDVTVEFTSMSKTFSMAGWRMGFAVGNERIIAALARVKSYLDYGAFTPVQVAAT FT AALNGPDDCIKEMRETYKKRRDILVESFGRAGWEIPPPSASMFAWAPLPPAFREIGSMQ FT FATLMVEKCGVVVSPGVGFGEHGEGFVRIAMVENEQRIRQAARGVRRFLESGVETLHNV FT VPLAAQR" FT CDS 54681..56006 FT /codon_start=1 FT /transl_table=11 FT /gene="HDH" FT /locus_tag="RPA2504" FT /product="putative homoserine dehydrogenase" FT /function="InterPro IPR000104:IPR001342:IPR002912:IPR005106 FT COGs COG0460" FT /EC_number="1.1.1.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6W0" FT /db_xref="InterPro:IPR019811" FT /db_xref="UniProtKB/TrEMBL:Q6N6W0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27945.1" FT /translation="MVAPLRVGIAGLGTVGAEVVRVIERQERTLSARCGRPVRVVAVTA FT RSKAKKRGLDLSGIKWAKSPLAIATDPEVDCFVELIGGAGDPAGPAIEAALAAGKAVVT FT ANKALIAKHGLKLASLAEKHNAALNYEAAVGAAIPVIKTLREGLAGTDIDRIYGILNGT FT CNYILTRMEQEGLSFDDCLADAQRLGYAEADPTFDIDGHDTAQKLAILASLAFGTKVSE FT SSVYVEGIRSITPEDLRAADDLGYRVKLLGVAVRTAKGIEQRVHPTMVPKTSSIAQVMG FT VTNAVSIDGDGIPPITLVGAGAGAAATASAVVADIADVARGIRAVPFGRPVAGLKATAK FT APMQRHEGGYYLRLLARDHAGTAATIAKRLAEQDISIESIVQRHPHRSLDANGKAAKSS FT IPVPVILITYATAEDAVRRALQAVQRDKVISGRPQVIRIEKN" FT CDS 56069..57073 FT /codon_start=1 FT /transl_table=11 FT /gene="glpX" FT /locus_tag="RPA2505" FT /product="Fructose-1,6-bisphosphatase/sedoheptulose FT 1,7-bisphosphatase related protein" FT /function="InterPro IPR004464 COGs COG1494" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6V9" FT /db_xref="InterPro:IPR004464" FT /db_xref="UniProtKB/TrEMBL:Q6N6V9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27946.1" FT /translation="MSTTISVPPQLLLERILTLEIVRVTERAAVSAARLRGHGNEKGAD FT QAAVDAMRRELNKMPIEGTIVIGEGERDEAPMLFIGEKVGAGINAGPKVDIAVDPLEGT FT TLCAKNMPGSIATMAMAEGGTLLHAPDVYMQKIAIGPGYEKNLIDIDAPPEDNILRLAQ FT AKGVPTSGVTVLVLDRPRHAELIAKIRATGAGVQLITDGDVAGVIHCADPDNTGVDIYM FT GTGGAPEGVLAAAALRCIGGQMQCRLLLDTHSKRNRAESMGIEDPNFVYQIEDMVKGDC FT LFAATGVTDGSLLSGVKFRKGVIQTETVVMRSVTGTVRYIKADHRQLEKFHLD" FT CDS 57182..57625 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2506" FT /product="possible acetyltransferase" FT /function="InterPro IPR000182 COGs COG0454" FT /EC_number="2.3.1.-" FT /db_xref="GOA:Q6N6V8" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6N6V8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27947.1" FT /translation="MAVEIRPVGPDERAAWEPLWAGYLAFYKATLAPEVSDVTWGRFHD FT PAEPMHLLGAYVDGKLTGIVQFIYHRSCWTIGDYCYLQDLFVADTARGLGLGRKLIEAV FT YARAKADGCSRVHWLTQTGNATARLLYDRIAEDSGFMQYRKIL" FT CDS 57690..58415 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2507" FT /product="possible haloacid dehalogenase" FT /function="InterPro IPR005834:IPR006388 COGs COG1011" FT /EC_number="3.8.1.-" FT /db_xref="GOA:Q6N6V7" FT /db_xref="InterPro:IPR005833" FT /db_xref="UniProtKB/TrEMBL:Q6N6V7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27948.1" FT /translation="MPATDATDVKALLFDVFGTVVDWRSSLIDDLSAYAAQRGLEGDWT FT KLVDVWRQAYVPSMDAVRKNPQADFLTLDELHRRSLERLVGEFGIKGLTEDDLNYMVTG FT WHRLKPWSGVVAALERLHTKYILAPLSNGNVGLLTRMAKNAGLPWDMVFGSDIFRHYKP FT DPENYLGAAKLLNLQPGEVMLVAAHNYDLRAAQALGLKTAFIPRPTEYGPLQTIDFDAT FT GDWTIVADDLAGIADQLGC" FT CDS 58444..60381 FT /codon_start=1 FT /transl_table=11 FT /gene="recJ" FT /locus_tag="RPA2508" FT /product="putative single-strand DNA-specific exonuclease" FT /function="InterPro IPR001667:IPR003156:IPR004610 COGs FT COG0608" FT /db_xref="GOA:Q6N6V6" FT /db_xref="InterPro:IPR004610" FT /db_xref="UniProtKB/TrEMBL:Q6N6V6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27949.1" FT /translation="MLRFARNDGQWVSPAAFLAVCASGASCLSALTMTPPISVLPAETV FT PAFLGVTRSATGKAWRDRLDARATAKAQAMVQRYQLPEMLARVLAGRGVEIDQVEDFLE FT PTIRKLMPDPASLTQMEAGAKRIADAASRGEKVAIFGDYDVDGATSSALLAWHLRHCGL FT DPLIHIPDRIFEGYGPNIDAIRMLAGKGATLLITVDCGTTSLEPLAEARRLGMSVVVID FT HHQCGDELPDVDALINPNRPDDLSGLGHLAAVGLVLMTLVAVNRELRHRGFWTTERPEP FT NLLDMLHHVALGTVADVAPLVGLNRAFVAKGLIAMRRRDHVGHTALMDVSRLNGPPEAW FT HLGFMLGPRINAGGRIGRADLGVRLLLESDVSEAARIAAELDRLNSERREIEQKAEAQA FT EAEAMASLGLEDKGAVIVTASEGWHPGVVGLVASRLKEKFGRPSFAIALEPGGIGTGSG FT RSISGVDLGKAVRQAVHDGLLLKGGGHAMAAGVTLRKERLAEFRAWLETTLAGDVAKSR FT HVNELYIDGAVSARGVTTDLAATLNRAGPFGAGNPEPIVALPAHQLIYADEVGQAHLRL FT RFKAGDGAIVNGIAFRSVGQKLGNALTENRGQTLHVAGSLSVDRWQGAERVQLRVIDVA FT VPDAGPTMIR" FT sig_peptide 58444..58542 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.993) with cleavage site probability FT 0.822 atresidue 33" FT CDS complement(60545..60835) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2509" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6V5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27950.1" FT /translation="MTDVRPQAETFQAPLDEIVWNTTFRRGFAEARSGRTPRYDDEVMF FT QDGLAWVYEWGRQFAILAPPDLPLVLPEEGALNPKAVELFREMIIQGEICT" FT CDS complement(60920..62038) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2510" FT /product="conserved hypothetical protein" FT /function="COGs COG1289" FT /db_xref="UniProtKB/TrEMBL:Q6N6V4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27951.1" FT /translation="MMRHHWTWHRIKALAHEEWRELVTFNPSDRPWQMPFSAALAAGVP FT MLIGAYFDHLDYGLISSLGGMAFLYLPRTPLHHRMVSMMAAGFGYAACYTLGLVVHLLP FT WLLVPAITFTAILVTMLCRFYRVGPPGSMFFVMAAAIAAYTPGDLMQLPLKAGLFVLGS FT LLATLIAMIYSVVVLRIRDPLPVPPLATDDFEHVVLDAVVIGVFVGGALALAQALQLER FT PYWVPVSCLAVIQGLSVRAIWNRHLHRLLGTAIGLGLAAVLLALPLEKWSIAFAVIALS FT FVIETAVIRHYGFAVIFITPLTIFLADAATLGQEPVHQIIEARFIDTVVGCVVGLVGGV FT CLHHPGFRHVTAGLIRRLIPAYLIPAKHDRGD" FT misc_feature complement(order(60998..61063,61109..61159,61175..61225, FT 61238..61288,61310..61366,61379..61444,61505..61570, FT 61601..61666,61730..61795,61856..61921)) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(62056..63285) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2511" FT /product="possible membrane-bound lytic transglycosylase" FT /function="InterPro IPR002477:IPR006311 COGs COG2951" FT /db_xref="GOA:Q6N6V3" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6N6V3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27952.1" FT /translation="MVDRDSPTSLTRRRLLQTALGAAVMLPAAASAAAPAGFDEWRDAF FT RAKALAKGVSPRTWDRVMGSLEPDMSVFKNFQKQPEFNEQLWQYINRRVSDWRITAGRE FT ALRKNEALFARIERDFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWREPR FT RRPYWETELINALRIVDKGWSTPEEMRGSWAGAMGHSQWMPEVWLNVGIDYDGDGRVSP FT FGRPDDALGSTAKYLVRRGNYHRGEHWGYEVEGPGGAVSGSRSYLAWSRSGVSRADGQP FT FPDSSASATMWVPVDGGPKFLIGPNFYAVKSYNPSMNYALAICHLGDRILGGSPFIHPF FT PGSERALTLAEVQEMQTRLTSAGFDTGGTDGRVGNDTMKAIRDFQIKSGLRPADGYGGL FT KVLARLRQGG" FT sig_peptide complement(63187..63285) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.658 atresidue 33" FT CDS 63508..64488 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2512" FT /product="Diacylglycerol kinase related protein" FT /function="InterPro IPR001206:IPR005218 COGs COG1597" FT /db_xref="GOA:Q6N6V2" FT /db_xref="InterPro:IPR005218" FT /db_xref="UniProtKB/TrEMBL:Q6N6V2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27953.1" FT /translation="MDRESEIGPDLEEAAPSDGSDLGSAIPQAAPTRRLLMVINRGSRS FT GSQAVGLAGSKLSAAGFDLVVSAPSSRHEVAPWIEAHAEGAAAVVIAGGDGTLNAAAPA FT LMKTRLPLGVIPAGTANDLARTLGLPLDMEAAADVIAAGHRKIIDLGDVNGHKFFNVAS FT VGLSTDLARELSGESKRRFGRLSYALTAVKVLSKARPFHAVIVSGEEQVRVKTMQVAVG FT NGRYYGGGMAVEHTAEIDDGQFDLYSLEFAQVWKLLAVAYDFRKGRHGLWREVRAARGT FT SFEIRTRKPRPVNADGELVTFTPARFELLREAVSVFVPKDPAPRG" FT terminator 64517..64537 FT /note="TransTerm prediction, 98+%" FT CDS complement(64567..65133) FT /codon_start=1 FT /transl_table=11 FT /gene="efp" FT /locus_tag="RPA2513" FT /product="elongation factor P" FT /function="InterPro IPR001059 COGs COG0231" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6V1" FT /db_xref="InterPro:IPR014722" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6V1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27954.1" FT /translation="MRVIASSIRKGNVLEQDGKLYVVLSAENIHPGKGTPVSQIEMRRI FT SDGVKISERYKTTDQVEKVTIEERNYSFLYEDGEGFHFMEPESYDQVQVTKDVVGSAAP FT YLQEGMVVKLSMHDTTAVAITLPQRATLEVVDTEPVTKGQTASSSYKPAVLSNGVRTQV FT PPHIGTGTRIVVLTEDGSYVERAKD" FT CDS 65271..66326 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2514" FT /product="putative lysyl-tRNA synthetase" FT /function="InterPro IPR004364:IPR006195 COGs COG2269" FT /EC_number="6.1.1.6" FT /db_xref="GOA:Q6N6V0" FT /db_xref="HSSP:1BBU" FT /db_xref="InterPro:IPR004364" FT /db_xref="UniProtKB/TrEMBL:Q6N6V0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27955.1" FT /translation="MEATSQPSPWWNRDRYLDRQPFLRARGGVTRAVRAWFEAAGFTEV FT ETAILQISPGNETHLHAPRTELLGPDGERRIRYLRTSPEFACKKLLAAGETRVFELARV FT FRDRERGRVHLPEFTMLEWYRAEAPYQQVIDDCVALVRVAAEATGIAAFSFKGRRADPQ FT AEPERLTVADAFVRFAGIDLLATIAKGEGDRTALANAAAARVRIAEDDTWSDIFSKVLV FT EHVEPRLGDGRLTVLSEYPAPEAALARTKPDDPRVAERFELYACGVELANGFGELTNAA FT EQRERFMAAMDEKERRYGERYPLDEAFLAAVGEMPEASGVALGFDRLVMLAAGATTIDQ FT VVWTPPAGEDA" FT CDS 66323..67414 FT /codon_start=1 FT /transl_table=11 FT /gene="kamA" FT /locus_tag="RPA2515" FT /product="putative L-lysine 2,3-aminomutase" FT /function="InterPro IPR001687:IPR003739 COGs COG1509" FT /EC_number="5.4.3.2" FT /note="Citation: Ruzicka et al. (2000) J. Bact. FT 182:469-476" FT /db_xref="GOA:Q6N6U9" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/TrEMBL:Q6N6U9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27956.1" FT /translation="MTKVTRLNTPAAATLRQPDELIAEGLAAADDRAMLSEVAARYAIA FT VTPAVAALIDRADPDDPIARQYIPSAEELSSLAFERDDPIGDAAHAPVEGIVHRHRDRV FT LFKPVHVCAVYCRFCFRREMVGPGKDNALSREATAAALDYIRAHDEIWEVIFTGGDPLM FT LSPRRLAEIMAELAAIEHVKIVRFHTRLPVADPARITPDLVRALRAPGKTTWLALHANH FT PRELTGDARAACARIVDAGIPMVSQSVLLRGVNDDAATLEALMRAFVECRIKPYYLHHG FT DLAPGTAHLRTTLAEGQALMRALRGNVSGLCQPEYVLDIPGGYGKAPVGPNYLSDADGT FT GRDSRYRVADYCGEVHLYPPLSE" FT CDS 67575..67835 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2516" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6U8" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27957.1" FT /translation="MKPVMIAAAILTLSGNVVLAQSGSGSGTDGSTTSPGASSSGADLR FT QAPVGHRQPRRDDTPPEQRIDQIDPADAALDRKIKSICRGC" FT sig_peptide 67575..67637 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.939 atresidue 21" FT CDS complement(67863..68453) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2517" FT /product="conserved hypothetical protein" FT /function="COGs COG3247" FT /db_xref="InterPro:IPR005325" FT /db_xref="UniProtKB/TrEMBL:Q6N6U7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27958.1" FT /translation="MSLPDDSLRPEDVERLQARVEAAIRDHWKAYLFEGILLLIIGFAA FT ILLPLLASITFTIVLGWLFFVAGVAGIGFSIWARKGPGFWWSLLSAVLALVAGLVLIAM FT PLQGTLTLTFIVGVYFLAEGVATIMYAFQHRGRMSERWGWMLAAGIADILVAFVIISGW FT PGTVWAIGLLIGINLVFGGTSLIAMALAARKST" FT misc_feature complement(order(67878..67943,67956..68021,68058..68123, FT 68139..68204,68220..68285,68298..68363)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 68765..68902 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2518" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6U6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27959.1" FT /translation="MCLLFACTTILSIQFRNHVVLGRGPKLHNGFAGRTKKAYIEQYSI FT " FT CDS 68960..69187 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2519" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6U5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27960.1" FT /translation="MCKDKRPHCSRCGARTGLARVSPVQSIELRIYECASCGQTDYYEV FT SPAPQASWGLLAGDRLAGILAALKRNDGAP" FT terminator 69698..69725 FT /note="TransTerm prediction, 98+%" FT CDS complement(69744..70313) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2520" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6U4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27961.1" FT /translation="MKTLIAAVIFAIGIQSTASAWHLSSYTDKMSDRRETSALVIDGDA FT TLYVGCMNGQPQARLRWLQRIGYGSDLGITYRFGQGPIVPRTAMLSQDGKDIWPWLGDP FT GEAIASLRNTNRLRVQIRGTVLDFDLTQGGSKLPEWSVANRDHQTSSGTARVSSDAPTP FT SAYRPGMLHLHLFGSVDSIPLTPAPS" FT misc_feature complement(70236..70301) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(70251..70313) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.943) with cleavage site probability FT 0.380 atresidue 21" FT CDS 70706..70915 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2521" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6U3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27962.1" FT /translation="MKDHIAKLIAQNESDLATILERIELLETGKMRVEAPWDDPPRDVT FT ADVIATDKRWAENIRATIDELKTW" FT tRNA complement(70994..71068) FT /gene="tRNA-Glu2" FT /locus_tag="RNA_33" FT /product="tRNA_Glu" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 71403..71660 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2522" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR009875" FT /db_xref="UniProtKB/TrEMBL:Q6N6U2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27963.1" FT /translation="MAKDKTKREPRKSVRQSGWITLDGGFAARPCEVLDLSSSGAKLVL FT NEAESLGSRLRLGFSRDARQGRQCEVVWRRGTTLGVKFVN" FT terminator complement(71707..71735) FT /note="TransTerm prediction, 98+%" FT terminator 71711..71731 FT /note="TransTerm prediction, 98+%" FT CDS complement(72001..72450) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2523" FT /product="putative lactoylglutathione lyase" FT /function="InterPro IPR004360:IPR004361 COGs COG0346" FT /EC_number="4.4.1.5" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6U1" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:Q6N6U1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27964.1" FT /translation="MRYLHTMLRVRNLDTALEFFVGALGLKEVRRIDNDKGKFTLLFLC FT APEDEELVKQSKGRPAPTIELTHNWDEESYGEDRFFGHLAFEVDDIYATCERLMKLGIT FT INRPPRDGQMAFVRSPDLQSVELLQKGEALPPQEPWASMPNTGHW" FT CDS 72943..73704 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2524" FT /product="Sir2 family, possible ADP ribosyltransferase" FT /function="InterPro IPR003000 COGs COG0846" FT /db_xref="GOA:Q6N6U0" FT /db_xref="InterPro:IPR003000" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6U0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27965.1" FT /translation="MIAPSLSSGVEQLGDMIAHASSIVPFTGAGISTESGIPDFRSPGG FT LWSRNQPIPFDEFVARQDARDEAWRRRFAMEQTFAKARPARGHRALASLYKAGKVPAII FT TQNIDNLHQVSGFAEHDVVELHGNTTYARCIGCGKRHELDWVREWFFRTGHAPHCTACD FT EPVKTATVSFGQSMPSDAMRRATELAQHCDLFIAIGSSLVVWPAAGFPMLAKECGAKLV FT IINREPTEQDEIADLVIRHDIGETLGPFVGN" FT CDS 73908..74615 FT /codon_start=1 FT /transl_table=11 FT /gene="cspA2" FT /locus_tag="RPA2525" FT /product="cold shock DNA binding protein" FT /function="InterPro IPR002059 COGs COG1278" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6T9" FT /db_xref="InterPro:IPR011129" FT /db_xref="UniProtKB/TrEMBL:Q6N6T9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27966.1" FT /translation="MGSDGFESKRLGVLPAASAAKPRAAEFPAGDFSPRDFGAGAHGDL FT SAPRDLNPRDAFTGLGEAANLVEISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRD FT GYQTAYEGARIVVECVQRAKGYQAFRIVSMDESTAIHPAQMLPARTHVSVTPTSGLERA FT QVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAE FT IQPENGAPGLSSH" FT CDS 74799..75284 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2526" FT /product="DUF192" FT /function="InterPro IPR003795 COGs COG1430" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR003795" FT /db_xref="UniProtKB/TrEMBL:Q6N6T8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27967.1" FT /translation="MQASEMFKFRRLRWLGALAMAVMLCGLLVGGAVAAQMQSLEIVGK FT TGVHVFTVEIATTDQEREVGLMYRKSLPDGQGMLFDFRPEQQVSMWMKNTYIPLDMIFI FT RGDGTILRIAENTEPLSTRIIASGGPVAGVLEVSGGTAKKLGIAAGDRVAHPLFKSR" FT sig_peptide 74799..74903 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.760 atresidue 35" FT misc_feature 74832..74900 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT tRNA 75365..75441 FT /gene="tRNA-Pro2" FT /locus_tag="RNA_16" FT /product="tRNA_Pro" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(75822..77444) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2527" FT /product="possible DNA-dependent RNA polymerase" FT /function="InterPro IPR002092" FT /EC_number="2.7.7.6" FT /db_xref="GOA:Q6N6T7" FT /db_xref="HSSP:1ARO" FT /db_xref="InterPro:IPR002092" FT /db_xref="UniProtKB/TrEMBL:Q6N6T7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27968.1" FT /translation="MTPEALSFWTQADKPFLFLAACIELTNALAYGPGYVCGLPCSWDG FT SCSGAQHLCAATRSEDAWKVNLIGNDEVHDLYTIVGNAAKQSMARDTDPMVSTILAYEG FT DWRKVFKRNTMTTFYGSKGFGMAQQHMDDLMEPLSREVMQKKRAKHPFGQTRKEHHAAS FT RLLAAHAAAAIKGEIPLAIKAMEFIQKLSAMMAHEGKPLEWTTPIGLPWSNRYHDPVTE FT RVNLWMHDHGVRRPFRPVVADGYKKTINKNHSVNGSAPNFVHACDAAHLLRTVNAARAE FT GITQFALVHDSFGSLPSHAARFRQIIREEFVRMYEEHDVLTEVLEQAKCDLDEHNDKLS FT ALVDMRADLTGKLNIKEVLNAEYAFAYPKLSEPDTKGEYADGKYKTEGTATEDYTERFQ FT EEIQKVADDNFPGKKNVHLPWKETKEGDIAFIFKNPKKKPILTDSRGKPLKEGTVIRGG FT SKIRIAGVIAAWEKGAKRGVSLWPDAVRVIKLSEGFDANAAFGAAEDGFNADDYEPTNF FT GNDGEDADNDADDAEAGDDAFKL" FT CDS 77571..78083 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2528" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6T6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27969.1" FT /translation="MDFKPLDALLADRLRVLEQEQRADVVPSLEVERAERIFPPAPIEV FT VRDVELLKPCEGFSGLCSHPPQSFHACCEGAQATDTSATPQPRRGEARSLLDGYSSLWG FT SIYGEPLDFLSDHRSPDPLNRNCMVMRAVNGDSAVVGHYFPEMVREAIREARKKRRDIL FT TPSLRLS" FT CDS 78121..78510 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2529" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6T5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27970.1" FT /translation="MISKRPDIYTQHDKAFSAVSAYVVLNSANERVATVALKFPCDGAG FT RLYAYVHWVGLEMVRGWAGGYGYDKRSAACASAARRIAIGNLTGDEWTNRRHEATAFVE FT ALEKDSGEDWTRQLEAAGFKVFQAV" FT CDS 78560..79333 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2530" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6T4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27971.1" FT /translation="MSEEPRISVNLPFPGFYDSLYSSEIDDIEQREAEYFAEHRQDEDG FT VPPELRIDQDKVAEILLDVTDYSAAYLTLAKTYSAAFDHVVSAELDLKLSLVWEEMTSP FT RAYNFETDRIFCSMPLSVAEELLRRSEAAGHEILAEVIRKRFTSRSGFSSFYSNDINDW FT LEKPLEIWDHNEVGTLLAAMMDDPNDRDLTIYYATVEGGGAYDAWSNAVDWKAFDRKVE FT EAREELAETLRADDPSYAPRARCDRTIDMFTGREG" FT CDS 79429..79707 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2531" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6T3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27972.1" FT /translation="MRSCGPIDRRAPWMDLMDNPHSKLERVKYRGRETVTHLATVDDLI FT CHSTNEGGAVLDFIVYGADGKALESFRATLCPEDLSRVKGISSVPND" FT CDS 79969..80730 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2532" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6T2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27973.1" FT /translation="MNSLNLAPVFYRARGSRDIMTGWQARTTGDIYAIDDTGAGYALVI FT GARSAFKVGDRLRFTRPIDLHPTDYIAADERAHVVDVDAETGVVSLWVEGVHIGLGDGV FT PVLKISPRDDAEAASCIEHFSDRRWWQLKRLGVLGGARADLLALSTLLVTMPLTAILHS FT IVPERTSAFFFVMAVVWSALVLGQRAAVALSLVTPVAFNLVCPPIGQISGFSLGEGALF FT LMELFVAISFPWFVSKGASTLNTVVDYVKQH" FT misc_feature order(80395..80463,80482..80550,80608..80676) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 80895..81314 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2533" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6T1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27974.1" FT /translation="MECSVLNIALKLPDKGLIAVTGELSDEERKALKALSDVLVEFVKR FT RPNMPLHQIIVMLSVALEEGKSLKTYSERTQYPTSSVSRTFLDNGPKMRTGEAGLGLLE FT ARPSQHNLREYETHLSAKGKSFFKSIAKRMLGVRG" FT CDS 81311..82093 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2534" FT /product="hypothetical protein" FT /function="InterPro IPR001687" FT /db_xref="GOA:Q6N6T0" FT /db_xref="UniProtKB/TrEMBL:Q6N6T0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27975.1" FT /translation="MSYGERRGGKLTGVWIGERVVNGTKRRCRANTKKDADAWETYIDR FT FGVLPTDGTGSSNPNTLGALKVRARSERADWKASRDPSLDQRLEEVVSFFGPTSAPEKV FT TSTRALDFVKHLENRKGRSGGPLSGKTINRYLAVVSALMDHARFLGWTKNTPAIPWQNE FT TKGRLLYFKDGQDQPVLEALGARPLQVCFEILAASAMRPTEFFTLTPDQIDIRNDWAWI FT RLWKTKNDDARSIPVDIELGRELRALLEAGEGGCACRG" FT CDS 82686..83804 FT /codon_start=1 FT /transl_table=11 FT /gene="waaG" FT /locus_tag="RPA2535" FT /product="putative UDP-glucose:(heptosyl) LPS alpha FT 1,3-glucosyltransferase" FT /function="InterPro IPR001296 COGs COG0438" FT /EC_number="2.4.1.-" FT /db_xref="GOA:Q6N6S9" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q6N6S9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27976.1" FT /translation="MKIALAIVSLFPSGGLQRDCMGIARRLMARGHDVTILASRRQGEL FT PTDLKIELLPVSAWSNHGRDQRFAEAAAQRKPAFDRLAGFGKLLDLDVLYCADGCDKAR FT PARWSDRFTARRRIKLGLEAASFAPGRSTQCLLLSQNQLDSFQQAWGTESERLALMPPT FT IDPGRRHPEFRADGSRERIRGELGVVGDTVVWLAVAAHPLTKGLDRAVAALAAFPEARL FT VVAGVADDSKQGRLMRRLAADAKVSDRITLLGMRRDIPELMAGADVLIHPARVDTTGTA FT ILEAVVNGLPVITTAVCGYARHVAAADAGVVLPEPFGPGNLSEALRQASAPGRRASWSE FT NGARYGASHDLYSGLDCAAAIIAGETAGTPLS" FT CDS complement(83738..85012) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2536" FT /product="putative opgC protein" FT /db_xref="InterPro:IPR014550" FT /db_xref="UniProtKB/TrEMBL:Q6N6S8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27977.1" FT /translation="MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNW FT GFSDAADLFVFISGYTASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAI FT GYVAQRFSDPEIINEFNVAGLVANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVL FT WLMLRRPDAVMIGSFVLYFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTV FT RSRSIIASRGMLWFCLAYLVFALVMTMAGRFQDFGDLFPRWLYDAFNPNDKTNLAPYRF FT LHFAVIVVLVIRFVPKDWKGLEWRGFDPLIKCGQQSLAVFCVGVFLSFVAHFELTMSSG FT SLMAQILVSVIGIALMTLVAYYISWSKQQDKPARPAAKPATQAAPAAPAAASGLEAQPA FT RSQLQDSGVPAVSPAMIAAAQSSPE" FT misc_feature complement(order(83918..83983,84014..84064,84128..84184, FT 84245..84310,84350..84415,84446..84496,84512..84568, FT 84689..84754,84812..84877)) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 85255..85560 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2537" FT /product="possible NADH dehydrogenase (ubiquinone) Fe-S FT protein 4 (18kD) (NADH-coenzyme Q reductase)" FT /function="InterPro IPR006885" FT /EC_number="1.6.5.3" FT /db_xref="GOA:Q6N6S7" FT /db_xref="InterPro:IPR006885" FT /db_xref="UniProtKB/TrEMBL:Q6N6S7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27978.1" FT /translation="MTARIYKPAKNAMQSGTAKTREWQLDYEPETPRTIEPLMGWTSSS FT DMQQQVSLRFHTRDEAVAYCEREGIPYQLIEPKEPVRRRAAYADNFAFRRPEPWTH" FT CDS 85709..87364 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2538" FT /product="putative acyl-CoA carboxylase, beta chain" FT /function="InterPro IPR000022 COGs COG0777" FT /EC_number="6.4.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6S6" FT /db_xref="InterPro:IPR011762" FT /db_xref="UniProtKB/TrEMBL:Q6N6S6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27979.1" FT /translation="MSSTLRSRSESEPAGNAMSLHSKIDPGSADFARNADAMRALVAEL FT NDKLAAVAAGGGEAARAKHTARGKLLPRERVDLLLDPGTAFLELSPLAANGLYGGDVHS FT ASIVTGIGRVMGRECMIVANDATVKGGTYYPMTVKKHLRAQDIARQNNLPCIYMVDSGG FT AFLPQQDEVFPDERHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESIIVR FT NQGTIFLGGPPLVKAATGEVVSAEELGGADVHSRQSGVTDHYAQNDAHAIGIARKIVST FT LKPAQRPPLNMREPREPLYPAEQLYGIVPAESRKPFDVRDIIARIVDGSEFDEFKKLYG FT QTLVCGFAHIWGFPVGIIANNGILFSESSLKGAHFIELCCQRGIPLVFLQNITGFMVGK FT KYEAGGIARDGAKLVTAVATANVPKFTVVIGGSYGAGNYGMCGRAYSPRFLWMWPNARI FT SVMGGEQAAMVLSQLRRDNIEAKGGSWSTEEEEVFRSPIRAQYETQGSPYYATARLWDD FT GVIDPADTRLVLGLGLSASSNASIEPTKFGLFRM" FT CDS 87378..89393 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2539" FT /product="putative acyl-CoA carboxylase biotin-carrying FT subunit" FT /function="InterPro IPR000089:IPR005479:IPR005481:IPR005482 FT COGs COG0439" FT /EC_number="6.3.4.14" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6S5" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/TrEMBL:Q6N6S5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27980.1" FT /translation="MMKSPALYRRFRTLLIANRGEIACRVIRTARAMGLRTVAVYSEAD FT VGAQHVAEADEAVLLGPARARDSYLNIERIIQAAKQTGAEAVHPGYGFLSESAEFAQAC FT ADAGLVFVGPTPQMITAMGSKSGSKALMEKAGVPLVPGYHGAAQDEATLAAAADKIGFP FT VLVKASAGGGGRGMRVVREAGELAAAIVSAKREAKAAFGDDTLLIERYVDNPRHIEVQI FT VGDSHGNLVSLFERECTLQRRHQKVIEEAPSPTLDAAQRETVCAAARRAAGAVNYVGAG FT TIEFVSDGKDVFFIEMNTRLQVEHPVTERISGVDLVEWQLRVAFGEALPLKQDQLKLSG FT HAIEARVYAENPAKNFMPSVGKITTWRTPAEVDGLRIDAGYRGGDSVSPYYDAMLAKVI FT AWAPTRQAAIDRLDRGLNETDVRGVVTNIPFLSALVTHPEVRANAIDTGFIERNLAALT FT AAPSTLGDLEFAAAVAAILRGEDEAAKAEGPSPWRTAGWMPVGRRKRSFLFRRGQGHDH FT TDHTIELTYGGGSSALTIDGRELAFAWTAAGDGIDVALGDARSRIHAVVDGAELYVRTR FT SGRFELHLVDPFGGESEEAVGEDKIVAPLPGTVVALLAEVGAKLDKGAPILTLEVMKME FT QTLRAPFAGTLTAVKCKVGDIVQEGAELAELEADAD" FT CDS 89514..90419 FT /codon_start=1 FT /transl_table=11 FT /gene="hmgL" FT /locus_tag="RPA2540" FT /product="3-hydroxy-3-methylglutaryl-CoA lyase" FT /function="InterPro IPR000891 COGs COG0119" FT /EC_number="4.1.3.4" FT /note="Citation: Baltscheffsky et al. (1997) Biochim. FT Biophys. Acta 1337:113-122" FT /db_xref="GOA:Q6N6S4" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q6N6S4" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27981.1" FT /translation="MTDTIRIVEVGPRDGLQNEKTPVSVADRIAFVEALVAAGLSTVEV FT GAFVSPKAIPQMIGSDEVLRASLKLPGEFHVLVPNEKGYEVARAAGAQVVAVFASASEG FT FSRANINCSVAESIERFRPVLARAQADGVKIRGYISCVLGCPFDGEVPLQAVVDAATTL FT WDLGCYEISLGDTIGVGTPKKVRELLRACAEAIPMQSLAMHFHDTYGQALANLYAGLEQ FT GARVIDSAAGGLGGCPYAPGATGNVATEDVLYMLEGMGVPMGVDMDRLIAATNSVAALL FT GRPPVSRVVNALNAKKKRAG" FT CDS complement(90514..91872) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2541" FT /product="TrapT family, dctM subunit, C4-dicarboxylate FT transport" FT /function="COGs COG1593" FT /db_xref="GOA:Q6N6S3" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q6N6S3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27982.1" FT /translation="MTVLGIGISYGLATLAAMFSGMPIAFALGAVALVFMAIYMPHASL FT DTVTQNVYEEMASITLLSIPLFILKGAAIGKSRAGQDLYSALHAWLHRVPGGLGVANVF FT ACALFAAMAGSSPATCSAIGSAGIPEMRKRGYSGGFAAGIIAAGGTLGILLPPSITMIL FT FAVAAEKSLGRLFLAGIGPGLLLVTLFGIYAVVRFRKEYATAKAAYEATGQTSAILTDE FT KFTMAQRFGALPRVLPFVILLTGVMIALYGGYATPSETAGLGGLLALLLIALIYGVWKP FT SDLSPIMTSTIRESTMLMMIIGMSLLYSYVMSYLHISQSAAEAIVAMQLPRWGLLAAIL FT ALVVVLGFFLPPVSIILMTAPIILPPLRAAGFDIIWFGVVMTIVMEMGLIHPPVGLNIF FT VIRNVAPDIPLSEVIWGTLPFVLLMMLAVLLLCLIPGISTWLPDLVMGPESIR" FT misc_feature complement(order(90547..90612,90700..90765,90802..90867, FT 90913..90978,91036..91092,91108..91173,91285..91350, FT 91396..91461,91525..91590,91651..91701,91762..91827)) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(91789..91872) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.995) with cleavage site probability FT 0.539 atresidue 28" FT CDS complement(91869..92420) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2542" FT /product="possible TrapT family, dctQ subunit, FT C4-dicarboxylate transport" FT /function="COGs COG3090" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q6N6S2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27983.1" FT /translation="MMHGPVPGQPDPTSTAQRETGGPLGHALALVNRAILVLAAVALVV FT ACCILSYSVAVRSLFHSATYWQDEAAVFLLVGATFLTAAFVQSQRGHIGIEAFTGLLPP FT AVNRVRLLLVDVASLAFCGFFAWKSWTLTHEAYVDGQVSNSIWSPPLAIPYALMAAGMT FT LLCLQIAVQIVNSFNGTKRA" FT misc_feature complement(order(91902..91967,92028..92093,92157..92207, FT 92253..92318)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(92417..93436) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2543" FT /product="TrapT family, dctP subunit, C4-dicarboxylate FT periplasmic binding protein" FT /function="InterPro IPR004682 COGs COG1638" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6S1" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q6N6S1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27984.1" FT /translation="MLSRRHLLISALAAPAVLKYGIGSAQAATTLKISHQFPGGTIDKG FT DFRDRLCRKFADEISKRSGGELVGEVYPGSSLIKTNAQFSAMRKGALDLSLYPMPYAGG FT EVPETNIGLMPGLVSTYEQGLSWKTKPVGKALTDFLADKGIVLVTWVWQAGGVASRSKA FT LLSPDDAKGLKVRGGSREMDMVLQQAGAAVLSVPSNEIYAAMQTGACDAGITSSTSLIS FT FRLEEVAKHLTSGADASYWFMLEPLMMSKAIFDKLPKNHQDIILSVGAELEAFGKQGAQ FT ADDIEVAKVYEKAGAKVDKLDAATVEKWAVIARDTAWKDYSKKTATCANLLKLATDAA" FT sig_peptide complement(93353..93436) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.993 atresidue 28" FT CDS 93707..93946 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2544" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR014299" FT /db_xref="UniProtKB/TrEMBL:Q6N6S0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27985.1" FT /translation="MTRTRIVLALMIAAFSSSLAMAPAAYAMDKMEKKDGMAHDSMAKD FT SMSKDGMKKDTMAKDGMKKDGMSKDSMSKDQMKK" FT sig_peptide 93707..93790 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.852 atresidue 28" FT misc_feature 93719..93787 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 94477..97470 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2545" FT /product="possible outer membrane protein" FT /function="InterPro IPR000408:IPR000498" FT /db_xref="GOA:Q6N6R9" FT /db_xref="InterPro:IPR011250" FT /db_xref="UniProtKB/TrEMBL:Q6N6R9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27986.1" FT /translation="MKNFPAWLSVWSVVAVACGSAHAADLQNVAVPSAVPAATNWTGFY FT IGTHVGAAASESAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQFGNYVLGIEG FT DASFGSINGLARCLHGTFACTSRIDELWTLAARFGYAAGDLLVYGKAGAAWADVHRRMA FT SGNFVNVLEASETRSGWLLGAGVEYAFLPGLSAKIEYNYADFGNRSLTMADQFGDVSDV FT SIGQTAHLVKVGLNYRIGAASVSAAPLPGVPLPQWSWTGIYLGVHAGGGFGSNDWDSAT FT GALLAASTSGGFPGRGDSSGLFGGGQIGANYQFGRWVAGVEASAAAADIGGYAKCATDV FT GTRRNFTCHNELSSLGTITGRLGQTWGNLLIYGKAGAAWATGSSDAQRAGSASRFTESG FT TRWGWVTGTGLEYALSPNLSAFVEYNHVDFGTQDTAYVDQFGNASEVGFKQKFDLVKAG FT LNYRLGSGAPMFGAGGDAPLFVKAAALPLGWQIEAGTRYWGSSGRMQKDLNDNVSPSRL FT NSRLIYGDQTGHSLEAFVRVDHASGLFAKANLGLGHLVNGQLNDEDFPSEVNYSNTISE FT MRDGRLAFGSADIGYNFINDGGRKLGGFVGYRSFYQTGNGFGCRQIATDFDTCGVPFPT FT NFVGLSETESWRGVALGLNVRAPLTERLRLEVDAAYLPYVNRAGFDNHWFRADINPQSE FT VGHGWGTQFEAILSYAVTDRFSVGVGGRYWYFATDSASTIFPREATTSPMQFYSERYGG FT FLQTSYKFGDVDAAETSAHGIAKAPQRIAPTNWTGLYVGASVGAGWGRTTYADPFPTPT FT TGDRADLGGALLGGQIGANYQFGHLVAGVEASANWANIRGTDTCFGAYPNPVVAGFNCG FT SRIDAIGAFTARGGYAIDRTLLYVKGGAAWDRQQDQFNTVGVGGTTLASTSTNWGWTVG FT GGLEYALAPSWSMALEYKYFDFGASPAFSTSVTPALDGVNLAPQTNKLQTVSLGVNYKF FT GPSLFARD" FT sig_peptide 94477..94548 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 24" FT CDS 97647..98105 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2546" FT /product="FKBP-type peptidyl-prolyl cis-trans isomerase" FT /function="InterPro IPR001179 COGs COG0545" FT /EC_number="5.2.1.8" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6R8" FT /db_xref="HSSP:1JVW" FT /db_xref="InterPro:IPR001179" FT /db_xref="UniProtKB/TrEMBL:Q6N6R8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27987.1" FT /translation="MRFAFPAGALLALAVTALSPAAALMSSTPAMSESAKSVTTPSGLQ FT IVDTQVGTGASPARGQICVMHYTGWLYENGAKTRKFDSSVDRNEPFEFPIGMGRVIKGW FT DEGVASMKVGGKRTLIIPPDLGYGARGAGGVIPPNATLVFDVELLGLK" FT sig_peptide 97647..97745 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.865 atresidue 33" FT CDS complement(98154..98495) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2547" FT /product="hypothetical protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6R7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27988.1" FT /translation="MKLPTLIVACIAAAVVVFGVRNFKSEPNPNDAAEQAAASAAAVPV FT SPIKTVTSTSCPSDGCPISCAEDDTLLSAFCVSGTKARFADTLKLANGKLTATCGMGAS FT SILAYCGRP" FT sig_peptide complement(98436..98495) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.885) with cleavage site probability FT 0.450 atresidue 20" FT CDS 98716..99522 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2548" FT /product="conserved hypothetical protein" FT /function="COGs COG2966" FT /db_xref="InterPro:IPR010619" FT /db_xref="UniProtKB/TrEMBL:Q6N6R6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27989.1" FT /translation="MTMIEPDPADFEPIHPYSLARISHVALQAGAVLAQSGASVRVVHE FT GARMVAEGLGVEVLGMRSGYASFEITLARGHHSFTRMTQIGPHGVNHRLDFAVRDLLKR FT AARGDMTPDAIEAELKRLQSETPRHPPWLVAIATGAACAAFGRLLGSDWLSFGPVLAAA FT SIGQGVRHLLLGRRFNVFVVAAIVGCISAALGGLGARLIGSSTTELAMMASILLLVPGV FT PSTNAQTDVMDGYPTMGSARAVTVIMIMVFAVTGLWLAEFVLRIHT" FT misc_feature order(99253..99321,99439..99507) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 99519..99998 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2549" FT /product="conserved hypothetical protein" FT /function="COGs COG3610" FT /db_xref="InterPro:IPR010619" FT /db_xref="UniProtKB/TrEMBL:Q6N6R5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27990.1" FT /translation="MTASWIAMLPYLAHQAAFGALAAAGFGVLFNFGWRTLAWCAVAGA FT LALAVRTVVQQTGGSLEAATFAAAFVTSFTAILALRWLGPACNAVALAGCIPMVPGAFF FT GQAMLGYMAVAADTTGSSTAQIVAASQAFVRVLSIVGAIGAGLAIPAYLLKSRQF" FT sig_peptide 99519..99587 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.847) with cleavage site probability FT 0.446 atresidue 23" FT misc_feature order(99546..99614,99627..99680,99708..99767,99786..99854, FT 99912..99980) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(99999..100556) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2550" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6R4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27991.1" FT /translation="MFEGDFKPPRAAKAPPETQGQSYLQDVPTPRDRRPAAVGSPMIPH FT TRRGSGPAAESGTDLTTASIRDFVDQSQARAILHLKAEIVRVRSFGQSHLYKFWAFKVD FT EITDPVWTDGAATTSTVWLTTDYGLLDGTGYRDRRKFRIDPGGRVSLIQASSHDGSIVE FT GRNAGRLASGVARSVAWPGTGR" FT CDS 100592..101035 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2551" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6R3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27992.1" FT /translation="MRSWGGAVLAALLLSGCASVTRGTTENISIASTPSGAKADVSGTE FT APFSCVTPCVVEVSRNADITVSLSKEGYEPQIIPLTREVSGSGGAGFAGNLLLGGVVGM FT GVDAATGAAMDHKPNPVIVTLQPVAPPPPPVVRHHRKPRVPVS" FT sig_peptide 100592..100660 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.580 atresidue 23" FT CDS complement(101891..102211) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2552" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6R2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27993.1" FT /translation="MNDWKLALTRIEELIKETETNLDLAARAGIYAAARVILNDLSEHI FT VEELSGPNHYAGEKIGGIKWHIGAALGFDVDNGHSASQHRAWAYGDLNSLKATLERTLT FT AR" FT tRNA complement(102330..102406) FT /gene="tRNA-Arg4" FT /locus_tag="RNA_32" FT /product="tRNA_Arg" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 102685..107898 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2553" FT /product="conserved unknown protein" FT /function="COGs COG2373" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6R1" FT /db_xref="InterPro:IPR011625" FT /db_xref="UniProtKB/TrEMBL:Q6N6R1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27994.1" FT /translation="MIGLVRALTLCAGLALGLASAQAADKAFQRNELADAAIKLEAQIK FT SEAAATNKPTAVLRSDADAAFKRGDYRGGLQILGQIAALDPADGDNWLRLARTVLQIKA FT ATSSEQTFLRERATTAAYIAYQRAKSPREEADALALLGRAMADRSLWRPALDSLRLSLD FT LREVADIRGQYEKLRAEHGFRLLDYTVDSDSASPRVCFQFSEELAKRTDFAPYVTLAGT FT DKPAISAEERQLCVEGLKHGERYNINLRAGLPSTVKEALAKSAEFNVYVRDRKPLVRFT FT GRAYVLPRTGQRGIPLVSVNTPTVAVQVFRIGDRNLINTVVDSDFQRTLSRYQLSDLGN FT ERGAKVWTGELDTATAALNADVTTAFPVDQVLGDLQPGVYVMTAAPKGPTANSDDDGQL FT ATQWFIVSDLGLTAFSGNDGVHVFVNSLASTDPLANTEVRLIARNNEVLATRKTDASGH FT VLFESGLARGEGGLSPALLTASSDKADYAFLSLKTNAFDLSDRGVAGRAVPAGADAFVY FT AERGVYRSGETVHLTSLLRDGQGVAMTASPMTLVVERPDGVEYRRAVLSDQGAGGRSLD FT VALNSAVPTGTWRVRAFTDPKGASVGETTFMVEDYVPDRIEFDISTKDKAIKADAPVEL FT KVDGRFLYGAPASALQIEGDLLVAPAEGRPGYAGYQFGVADEETTSNERTPLENLPETD FT ADGAATFELSLPKPPSSTRPQEAQVFVRMAEAGGRAVERKLVLPIAPAAAMIGVKPLFA FT DRNVAEGDVAKFDVAFVAPDGTSLPRSGLRYELLKIESRYQWYRQNSSWDYEPVKSTKR FT VADGDLSIKAGEPARLQFNPEPGRYRLDVKTADVAGPLTSVQFDVGWYSDGSADTPDLL FT ETSIDKPEYASGDTMTVTVNARTAGLLTVNVLGDRLLTTQSLQVKPGSSQVKLSVGKDW FT GSGAYIVTTLRRPLDTAAQRMPGRAIGLKWFGIDKAARTLSVELSPPALVRPSTTLKLP FT VKLGGLSPGEDAKIVVAAVDVGILNLTGYKPPAPDVYYLGQRRLSAEIRDLYGQLIDGM FT QGARGQIRSGGDSSAAELQGSPPTQKPLALYSGIVTVAADGTATIDFEIPEFAGTARVM FT AVAWTATKVGRANTDVTVRDPVVLTTTLPRFLRNGDRGTMAFDLDNVEGAAGDYTIKVS FT ASGPVKLSGEAATTLKLAAKQRGSAKLMLDAGGAGTAALDVAIQGPNGLSQARHYALDI FT RPANQTLARRSIRTLAKGESLTLTSDMFSDLVPGTGGLSLSVSLSTALDAATILKALDR FT YPFGCTEQITSRAMPLLYVNDLAAGAHLAMDGSADERIKGAIDRLLLRQGSNGSFGLWS FT TGGDDAWLDAYVTDFLTRAREKRFVVPDVAFRAALDRIRNSVVNADEPEKDGGRDLAYG FT LYVLARNGAAPIGDLRYLADTKLDKLATPIAKAQLAAALALVGDRARAERVYAAAADSL FT NPKPSIVFGRVDYGSELRDAAALVSLASEGNAPRPTLTTAVQRVEAARGLSPYTSTQEN FT AWLVLAARALAKETMALDLNGDAVKTALYRSYKADEVKSKPLKIANTGDSPVQAVVTVS FT GSPITPEPAASNGFKIERHYFTLGGEPADITKAKQNERFAVVLTITEPKPEYGHVMIAD FT YLPAGLEIDNPHLVSSGDSGTLSWIADGAEPVNTEFRDDRFTAAMDRKADDKSVFTVAY FT VVRAVSPGKYVLPQAVVEDMYNPSRYGRTGTGTIEVRAAK" FT sig_peptide 102685..102756 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.956 atresidue 24" FT CDS 107895..110090 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2554" FT /product="penicillin binding protein" FT /function="InterPro IPR001264:IPR001460 COGs COG0744" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6R0" FT /db_xref="InterPro:IPR009647" FT /db_xref="UniProtKB/TrEMBL:Q6N6R0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27995.1" FT /translation="MSVAPTPPRSSCPGSSRASTPDSSTAKDVDGRDEPGHDGRRGCSW FT LKRGAIVSAVAVVAVVGGLIAYAVSLGPLPLDEARQTSVTVVDRHGKLLRAFAMADGRW FT RLPVDASTEVDPRYLKLLLAYEDKRFYQHHGIDPLAVGRAALQLVSHGRIVSGGSTITM FT QLARLMEPRRQRSLGAKLRQMVRAVELEQRLSKQQILDLYLALAPYGGNLEGIRAASIA FT YFGKEPKRLTLAESALLVALPQSPETRRLDRFPDAAQAARDRVLARMVEDGVIGADDAA FT QARAVAVARQRKPMPVLAPHSADQAVIADKNAKLIRLTLDAGLQRALETLARDRAAALG FT PDISIGIVAVDNANGDVLAHVGSADYFDDRRAGQVDMARAVRSPGSTLKPFIYGLAFED FT GFVHPESLIDDRPVRFGAYAPDNFDMTFQGTVPVRKALQLSLNVPAIELLERVGAARLA FT SRLKQAGTELVLPKDEAPGLAMGLGGVGIKLIDLVQLYSGLPRLGSVLPLREIASSGND FT KRETLRLMDQVAAWQVGSVLLGTPPPENAVRNQIAFKTGTSYGYRDAWSVGFDGRMTIG FT VWVGRPDGAPVPGMIGRVAAAPVLFDAFARSGQMRASLPKAPKGTLVASNAKLPLPLRR FT FRSSGDLVQPGDDKALRIQFPLNGSRIDAVSEASAGALPVKVAGGVLPMTVMVNGLSVG FT EIDGRRQRLIAPPGPGFVRLTVMDASGAADTVVVRIQ" FT misc_feature 108039..108107 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 110141..111886 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2555" FT /product="Glycosyl transferase, family 39" FT /function="InterPro IPR003342 COGs COG1807" FT /db_xref="GOA:Q6N6Q9" FT /db_xref="InterPro:IPR003342" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27996.1" FT /translation="MIETSARPRFGAPREPKTTVDPGRGLVAVLDFVTVSHLRASAFLV FT LVGLLFFLPGFFNIPPIDRDEARFAQATKQMVETGDFIDIRYQDEVRYKKPVGIYWLQA FT TVVETAGKLGLPRAQVRIWLYRVPSLAGAIGAVLMTYWAALAFVGRRGAVIAALMLCSC FT ILLGVEARLAKTDAFLLFTVTAAMGAMARAYLGWQRGDIDPDRSWIVPAVFWTALAGGI FT LLKGPLILMFIALTVIPLAILDRSVAWMWRLRPLLGLPWMLLWVLPWFIAIYLRAGDTF FT FADSVGGDMLSKIASPMESHGAPPGLYFLLFWATFWPGAPLAAMAAPAVWRARREPGAQ FT YLLAWLIPSWIVFELVITKLPHYVLPLYPAIAIMTAGAIERRVLSRSWLARGSAWWFAI FT PAIILPLVVIGAVYLTRHPIFLAWPFAAGSLIFGLFAWRLFDDNRAEASLLNGALASLF FT LVVAVFGVVVPTLRPVFPSVEIARELRKVVCVGPKAAAAGYHEPSLVFMTGTDTLLTDG FT SGAADFLLGGSCRFAIVESRSERAFASRAEAIGLRYNVAVRIDGYNFSQGKPVSIAIFR FT SEGTQ" FT misc_feature order(110258..110326,110504..110572,110582..110650, FT 110669..110728,110771..110869,110906..110974, FT 111065..111133,111152..111211,111224..111277, FT 111314..111382,111392..111460,111479..111547) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 111888..112736 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2556" FT /product="PA-phosphatase related phosphoesterase" FT /function="InterPro IPR000326" FT /db_xref="GOA:Q6N6Q8" FT /db_xref="InterPro:IPR000326" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27997.1" FT /translation="MALSDKAGRAQRIYPVELVLVIGRALAQLVRPPSHSRRAEAARRW FT ARHALWLTAALSLAIVILMVGVDAFEIGLMPPRGTPSLWPVKIITDFGKSAYVLWALAG FT LLLLVLLIVPLLRGVPRAVLIGFGTRVQFLFLAVLVPVAIGEVLKGIIGRGRPFVGGAA FT DPYNFSLFAWNEAYASFPSGHSITAAALGFAVAAVWPRLTAVMATYVFVILVSRLVLLA FT HHPSDVVAGALLGLVGAMAVRYWFAARRLAFTIRQDGTIDPLPGPSWDRVKRVARGGSA FT P" FT misc_feature order(112029..112097,112176..112244,112278..112346, FT 112404..112472,112491..112559,112569..112628) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 112800..113552 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2557" FT /product="Glycosyl transferase, family 2" FT /function="InterPro IPR001173 COGs COG0463" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6Q7" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27998.1" FT /translation="MPETLSQSGPPPAVSIVVPVRNEADNVAPLIAEIAAALDGRWIYE FT IVYVDDGSTDATPQRLAALRAERPNLRQIRHATSCGQSAAVRTGVRAARGAMVATLDGD FT GQNNPAFIPELIFALEQGGARVGLAAGQRVGRKDTGFKRLQSRVANKVRNAILRDGTRD FT SGCGLKAFRRDVFLSLPYFDGLHRFLPALVRREGFDIVYVDVADRPRLSGKSNYGFFDR FT LWVGLMDLAGVWWLIRRKKATPVATEVN" FT CDS 113552..113890 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2558" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6N6Q6" FT /db_xref="InterPro:IPR011499" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27999.1" FT /translation="MLIQYGQELGDYLYDVFVAKFDFWLAFGLIAQLLFTARFLVQWIS FT SERAGKSVVPMAFWFFSMGGGLMTLVYGIAKREPVIILGQAMATIIYVRNIMLIIKSHA FT RGSESLPN" FT misc_feature order(113618..113674,113708..113776,113786..113845) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(114053..115249) FT /codon_start=1 FT /transl_table=11 FT /gene="metC" FT /locus_tag="RPA2559" FT /product="cystathionine beta-lyase" FT /function="InterPro IPR000277:IPR006233 COGs COG0626" FT /EC_number="4.4.1.8" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6Q5" FT /db_xref="InterPro:IPR006233" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28000.1" FT /translation="MDASDSSGTPAPLSTQTRLVTAGRDTAAQKGFVNPPVVHGSTVLY FT PTAADLHAHRGEYSYGRHGTPTTKALQQALIALEGPQCAGVGITPSGVSAISTALLAVV FT KAGDHVLVCDNAYRPTRLFCDQMLNRLGVETSYFDPLIGAGIASHLRPNTVAVVVEAPG FT SQSFEMPDIPAIAAVAKQHGALVIDDNTWATPLYHRSLEQGVDISIQAATKYIGGHSDI FT MFGTVSANAAAWPKVSEAIRLLGVCAGPDDVFLALRGLRTLEVRLARHYQAGLDMARWL FT TARPEVQRVLHPGLDTDPGHAIWKRDFTGASGLFSIVLQPAPQAAVDALLDTVSLFGMG FT YSWGGFESLVIPFDCASYRTATQWNPGGPALRLHIGLESTDDLKADLERGFAAFNAAR" FT CDS 115571..116587 FT /codon_start=1 FT /transl_table=11 FT /gene="aapJ-1" FT /locus_tag="RPA2560" FT /product="ABC transporter, periplasmic amino acid binding FT protein aapJ-1" FT /function="InterPro IPR000911:IPR001311:IPR001638:IPR005768 FT COGs COG0834" FT /note="observed by proteomics" FT /note="Citation: Walshaw and Poole (1996) Mol. Microbiol. FT 21:1239-52" FT /db_xref="GOA:Q6N6Q4" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28001.1" FT /translation="MKRVSLVAAFAAAAVFSVSSADAQTLKTVKDRGMLSCGVSQGLPG FT FSAPDDKGNWAGLDVDVCRAIAAAVFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTT FT WTLSRDTSLGVNFAGVSYYDGQGFMAKKSLKVNSALELNGASICVQTGTTNEQNVADYF FT KGNNMKYEVIAFANADEAVKAYESGRCDVFTSDVSQLYAQRLKLATPADHAVLPEVISK FT EPLGPLVRHGDDQWFDIVKWTLFALVNAEELGVTQKNVDEMAKSDKPELKRVFGTDGNL FT GEQLGLTKDWVARIVKATGNYGESFERNVGSGSKLEIARGLNKLWNKGGIMYAPPIR" FT sig_peptide 115571..115642 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.626 atresidue 24" FT CDS 116608..117813 FT /codon_start=1 FT /transl_table=11 FT /gene="aapQ-1" FT /locus_tag="RPA2561" FT /product="polar amino acid ABC transport permease protein FT aapQ-1" FT /function="InterPro IPR000515 COGs COG0765" FT /note="Citation: Walshaw and Poole (1996) Mol. Microbiol. FT 21:1239-52" FT /db_xref="GOA:Q6N6Q3" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28002.1" FT /translation="MAIDARPPPPQLVAKLRRALGGRSGWKGLLAQVLFVAALFWIGYE FT IVDNARDNLANQRIASGFAFMSHTAGFGVSQTLIPYQESDSYTRVFLVGLINTLVVSVV FT GIFFATVIGFAVALARLSPNWLISRIGGGYVEIVRNLPLLFQILFWYLAVLGSLPSPRQ FT SVSVMDSFFLSNRGIVVPRLAGEAGLDGFLVALLIAVAAAIVLPLYARRRLFATGKPMR FT VWPWVLGLLIGLPLIAFVIVGKPFSLEVPVLRGFNFVGGSRIAPEFVALTLALSTYTAA FT FIAEVVRAGILSVHKGQMEAGASLGLSRGQTLRLIVIPQAMRVILPPLTNQYLNLTKNS FT SLAVAIGYPDLFSVFAGTTLSQTGQAIEVIAITMGVYLLISLVTSALMSLYGWRINRSM FT GA" FT misc_feature order(116689..116748,116782..116850,116893..116961, FT 117016..117084,117178..117237,117274..117333, FT 117397..117465,117628..117687,117715..117783) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 117810..119315 FT /codon_start=1 FT /transl_table=11 FT /gene="aapM-1" FT /locus_tag="RPA2562" FT /product="polar amino acid ABC transport permease protein FT aapM-1" FT /function="InterPro IPR000515 COGs COG0765" FT /note="Citation: Walshaw and Poole (1996) Mol. Microbiol. FT 21:1239-52" FT /db_xref="GOA:Q6N6Q2" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28003.1" FT /translation="MSELGSVTPVFVRGEMVPQRPPPVHTPGVLGLVRQRLLNSPTNIL FT LTIVGLLLLYFTVVPTVKFLLVDAVWSGSNRTDCLADKAGHPVGACWPFVQAKFSQFIY FT GFYPTPERWRVDLVFALGALLLLPLLIPRAPAKTLNAGLFFIAFPVLAFFLLHGGGVQG FT FGVTWSADLLSGVADSVGRAGRKLAAGGAIGSVIGQVLLGLGTVLVWLSWPLVTLRDWI FT QASSQPVWLDLLITAVVVTALVFVLTGVRNGWRALATTVGMFAGIAVMVAALRLDRGGL FT PVVDTRMWGGLLVTLVVSVTGIVASMPIGIALALGRRSTIPLIRIFSVAFIEFWRGVPL FT ITVMFFATYMLPLFLPGNFTIDNLMRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAAS FT ALGLSYWKITGLIVLPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLGQLRAAFADP FT TWSTPTTLFTGFAFTGLIYFVFCFGMSRYSLSVEHRLNAHRRT" FT misc_feature order(117939..118007,118158..118211,118239..118307, FT 118368..118436,118494..118550,118569..118637, FT 118680..118748,118785..118853,118896..118955, FT 119076..119144,119187..119255) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 119331..120071 FT /codon_start=1 FT /transl_table=11 FT /gene="aapP-1" FT /locus_tag="RPA2563" FT /product="amino acid ABC transporter, ATP-binding protein FT aapP-1" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1126" FT /note="Citation: Walshaw and Poole (1996) Mol. Microbiol. FT 21:1239-52" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6Q1" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28004.1" FT /translation="MADTPIVSIAGLNKWYGEFHVLRDISLDVARSERIVICGPSGSGK FT STLIRCINALEEFQEGKIVVDGIDLGPTLKHVDEIRREVGMVFQSFNLFPHLTVLENCT FT LAPIWVRNIPKKDAEATAMKFLERVRIPDKANKYPGQISGGQQQRVAIARALSMNPKVM FT LFDEPTSALDPEMVKEVLDTMVDLAEEGMTMLVVTHEMGFAREVADRVVFMDAGQIIEA FT NEPKEFFAHPQHARTKLFLSQILR" FT CDS complement(120096..120365) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2564" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6Q0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28005.1" FT /translation="MSVFRSFGATLVAAVAVLLVSDALFGDDSYRFDRSLYDSRLYAPR FT HAPGAATINDFDEAMTPAERIRETFSQFTVSSAKRYTSRATIIR" FT sig_peptide complement(120285..120365) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.932) with cleavage site probability FT 0.555 atresidue 27" FT misc_feature complement(120288..120344) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(120511..120648) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2565" FT /product="O-acetylserine (thiol) lyase C-terminal portion" FT /function="COGs COG0031" FT /EC_number="2.5.1.47" FT /db_xref="GOA:Q6N6P9" FT /db_xref="UniProtKB/TrEMBL:Q6N6P9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28006.1" FT /translation="MTILCDYGSRYQSKLFNPDFMRSKNLPVPDWMETQSTIQVPFEQA FT " FT CDS 120865..122448 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2566" FT /product="putative EA59 gene protein, phage lambda" FT /function="InterPro IPR001687:IPR003439 COGs COG1131" FT /db_xref="GOA:Q6N6P8" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N6P8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28007.1" FT /translation="MFFTIVDDLREVPAGARSAAFLVTDYWDDWFSFRTMFGLWLFDEE FT GVRHRVGSVKIGQHGLRPSRGVQSGTDMPPDTRYPNLPRTFDDVDDRFFSLGQDENYYE FT TLNDLSENLRNRVLLGLRDCAFNLDIFEAELTQEVMQSSLLRSVSAANVKGRLHRLSRG FT DATLTEFKFDYEFPAIDDGIDTPMLHFEVTPESQPPTNVHVLIGRNGVGKTRCMRGLAE FT ALLGRGSEDDRHMGRIVINPDAVDEGEAWSFSGLAMISFSAFDDFDLRPLKDDLIRSKQ FT VGLVQWYFDENEKAERSKMKTPADLAMDFRESFSICRQGLRAARWRAAVETLEADDLFA FT EANVTSLLDMDDEQWGDSAVSLFKRLSSGHAIVLLTMTRLVEVVDERTLVLLDEPEGHL FT HPPLLSAFIRALSDLLVKRNGVAIVATHSPVVLQEVPKLCAWKLRRARAVAVVERPTVE FT TFGENVGILTREVFGFEVTKSGFHSLLNDAVTTRGLQYDAVLEHFGGQLGAEARAIVRA FT LIADRDAEKL" FT CDS 122457..123296 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2567" FT /product="possible EA31 gene protein, phage lambda" FT /db_xref="InterPro:IPR003615" FT /db_xref="UniProtKB/TrEMBL:Q6N6P7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28008.1" FT /translation="MRHLSRPTFVARDVLNLCIKSIRDNALKERLALVVDQIDAAEASY FT IQHGNMQDLYQIPQTLGIGGVTVDEMKRVYKNTFAKSARTRNIYDKIKKLPVNDICPIC FT GQRTVGGLDHYLAQSLHSALVLAPINLVPACSDCNKAKLDAQPNAAAEQTLHPYFDNVD FT NEAWLYAAVAETNPASLRFYPDPPAGWSPVNQERVFKHFRTFGLGALYASHSGEELTNI FT RYGLQRIARRGTVEDVRLELLDRAESAKAAHVNSWQTAMYCALAESDWFCAGGFNVS" FT CDS complement(123436..124473) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2568" FT /product="O-acetylserine (thiol) lyase" FT /function="InterPro IPR001216:IPR001926 COGs COG0031" FT /EC_number="2.5.1.47" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6P6" FT /db_xref="HSSP:1O58" FT /db_xref="InterPro:IPR001216" FT /db_xref="UniProtKB/TrEMBL:Q6N6P6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28009.1" FT /translation="MSIKNDVVDAIGNTPLIKLKRASEATSCTILGKAEFMNPGQSVKD FT RAALFIIQDAVKRGTLRPGGVVVEGTAGNTGIGLALAANALGFRTVIVIPNTQSQEKKD FT MLRLCGAELIEVPAVPYANPNNYVKLSGRLAAQLAETEPNGAIWANQFDNVANRQAHIE FT TTAPEIWNQTDGKVDGFVAAVGSGGTLAGVSIGLKQFNPKVRAVLADPLGSALYNYYKN FT GALKSEGSSITEGIGQGRVTANLEGAQIDDAYQIPDDEAVPLIYDLLEHEGLCLGGSSG FT INVAGAIRLAKDLGPGHTIVTILCDYGSRYQSKLFNPDFMRSKNLPVPDWMETKSTIQV FT PFEPV" FT CDS complement(124584..125813) FT /codon_start=1 FT /transl_table=11 FT /gene="cfa1" FT /locus_tag="RPA2569" FT /product="cyclopropane-fatty-acyl-phospholipid synthase" FT /function="InterPro IPR000051:IPR003333 COGs COG2230" FT /EC_number="2.1.1.79" FT /db_xref="GOA:Q6N6P5" FT /db_xref="InterPro:IPR003333" FT /db_xref="UniProtKB/TrEMBL:Q6N6P5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28010.1" FT /translation="MSELVALTPDNVDDRVADLPRVVRMALAFGARLQRGTLDVTLPDG FT RRFRLGGAEPGPAAEMRLHSYGFASRLIHGGDIGIAEAYLNREWDTPDLTQFLYLFCVN FT HEMIQAMLADNPLMRLVQMVRHWFNRNTKRQARKNIYAHYDIGNEFYSAWLDPSMTYSS FT ALFEDHTHDLTAAQINKYQRLAEAIDLKPGQSVLEIGCGWGGFAEYAAKTFDVRLVGLT FT ISREQRDFAQQRMFEAGLADKVEIKLQDYRDERGRYDRIASIEMIEAVGEEFWPKYFSQ FT LRDRLMPGGLVGIQAITIQDRFFQTYRREVDFIQRYVFPGGMLPSPGVLKSLGETFGVP FT VVRERVFGEDYAKTLATWRDNFRAAWPKLRSQGFDDRFRRLWEYYLSYCEAGFLSGNID FT VRQVVFAKAG" FT CDS complement(125873..126718) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2570" FT /product="conserved hypothetical protein" FT /function="COGs COG3496" FT /db_xref="InterPro:IPR010775" FT /db_xref="UniProtKB/TrEMBL:Q6N6P4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28011.1" FT /translation="MALLAANTSPSLGAPPAAAASLYVGEVMHARLKPVGHRFQYRVMS FT LLIDLDRLDEADRMSPLFGVNRRALYSFHEADHGPRDASSLRAYAQASAEAKGVDLTGG FT RVLLLTYPRIAGYTFNPLSVYFCYDASGALAVVIYEVRNTFGDIHPYVLPVHAGEMGPA FT GLRQEQDKLFYVSPFIEMAMRYHFRIVPPGEIVRLRILETDVDGPVLAATFAGTHRVLS FT TASLLQAFLALPLMTLKVIAAIHWEALRLWIKGAKLVPRPAPPSPPTGFAAGGHDAYTH FT " FT sig_peptide complement(126659..126718) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.986) with cleavage site probability FT 0.958 atresidue 20" FT CDS complement(126720..128033) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2571" FT /product="possible NADPH-dependent oxidoreductase" FT /function="InterPro IPR002937 COGs COG2907" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6P3" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q6N6P3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28012.1" FT /translation="MRVAIVGTGIAGNAAAWALSQRYPVTVYERELRAGGHSHTVTVDY FT DGTTIPVDIGFIVYNQLNYPDLTAMFAHLGVETVESCMSFSVSADAGRFEWKGGGSNWL FT ETADGLFAQRRNLLSPSYLQMLRHILVFNEKSVEDFKTGALAGLTLGDYFESRKFAPRL FT LTDYLAPMGAAIWSAPASQILDFPAENFVAFFNNHRLLHYERPIWRTVKGGSARYVEKL FT TSAFKDDMRLGAAVTSIERSPKGVIVRDSLGGLGVFDHVVIGAHSDQALAMLSDASDIE FT RDILGSIGYAPNMVYLHRDPRLMPKRKRAWASWNFLRWQREGSPVNDVAVTYWMNRLQG FT IDADKPLFVSLNPPFEPAPELTFGRYACDHPQYTAKAFAAQRRVGELQGHRNTWFCGAW FT TGYGFHEDGLRSGLAVAEHLGAPVPWRGPPSEFREAAE" FT sig_peptide complement(127977..128033) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.874) with cleavage site probability FT 0.783 atresidue 19" FT CDS 128468..129916 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2572" FT /product="possible outer membrane efflux protein." FT /function="InterPro IPR003423 COGs COG1538" FT /db_xref="GOA:Q6N6P2" FT /db_xref="InterPro:IPR010131" FT /db_xref="UniProtKB/TrEMBL:Q6N6P2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28013.1" FT /translation="MSTTLRYLGRAARLVVASALVAASGGCILTQDLPDPALDLPNRYK FT AASRTAVEKPPALDWWRGFRSAELTQLMEEAQTVNLDVAAAVARIRQADAQARITGAAL FT LPSLSGSGNGSQVKTSGSNISNTTIAGRRYSTYSSSLSASYEIDFWGKNHDAALAAEET FT ATANRFDRDTVMLTTMASVANAYFQVLAAQDRIRTAEGNIKSASRILDAIKQRLKAGTG FT TDLDVAQQESVLANQRAALPPLRLTLAQNVNALATLVARPPESVKIAGGSLTRLSSPRV FT TPGLPSDLLTQRPDIRRQEAQLASATANVGSARAQFFPTIQLTAQGGYQSAALASLFTP FT QATFSNIAAGLTQPIFDGGRIQGNFDLTQAQQEELLQTYRKTVVSAFADVDNALESIKQ FT NTERLRLQREVVASSRRAFDLAEQQLRAGTSDIVTVLNTQLTLFQAEDALIQTQLARFQ FT AIVSLFQALGGGWEPKMERTADAL" FT sig_peptide 128468..128536 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.941) with cleavage site probability FT 0.438 atresidue 23" FT CDS 129906..131276 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2573" FT /product="possible membrane protein, permease." FT /function="InterPro IPR006143 COGs COG0845" FT /db_xref="GOA:Q6N6P1" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q6N6P1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28014.1" FT /translation="MLFKPDAKDTSGAGPGRKGWGGLLRRRSVSLLLVALILGGLGFVA FT WRAVQTKQAERRMPPDLAVPVLAATPKVADVPVYLDGVGSVKPLATVTVRAQVDGKLVA FT VNFTEGQDVKAGDVLAEIDPAIYQAQYDQAVAKKAQDEAQLANARIDLARYQQLAASNA FT GSKQQADTQKATVAQLEAQVRSDQAAIDNAAATLSYTKVVAPISGRAGLRQVDKGNIVH FT ASDTTGIVVLTQLQPIAVQFSLPQQQIVRVNAAAAGAPLRVDVFGNDGVTVVDTGTLKG FT IDNQVDQTTGTVKLKAEFPNAKMQLWPGQFVNVRLKVDTLKQAIVVPVSAVQRGPAGTF FT SYIIGEDNIVHASPVKVTQQNESEAVIAEGLTSADRVVTTGFANLAEGAKVTIGDASQT FT PTADLAPQKRRRPPGAQGQSGSGEAGEGQGKRRRGEGGQQQAPAAGGTPSSGAPKAP" FT misc_feature 129987..130055 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 131347..134478 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2574" FT /product="possible RND efflux transporter" FT /function="InterPro IPR001036 COGs COG0841" FT /db_xref="GOA:Q6N6P0" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/TrEMBL:Q6N6P0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28015.1" FT /translation="MGVSEPFIRRPIATSLLGVALMIGGLLGYLALPVSALPQVDFPTV FT QVSTQLPGASPDVVASLITAPLERQLGQIPSLTAMTSTSSYGVSQVSLQFDLNRDIDGA FT TQDVQAAINAAAGILPKNLPYPPVYAKVNPADAPVMTLALTSTTVSLRTMSDLADTLMA FT QRLAQISGVGRVSVLGGLKPAVRVQADLARLAAYGISMEDLRTAIANANVSGPKGSLDG FT AQQAYTIAANDQIAAADAYRPIIVAYRNGSPVTIGDVAQIVDGLENERTGAWYQGTPAV FT ILDIQRQPGANVIDVVKGIRAEIPRIQRLVPAGVKLTVVSDRTETIRASVHDVQFTLLL FT SVVLVTLVVLLFLRSMRATIIAGVALPLSLITSFGVMYFMGFSLDNLSLMALTIGTGFV FT VDDAIVMIENIVRHMEDGESPMQAALKGASEIGFTVISLTMSLIAVFIPLLFMSGLVGR FT MFREFALTLTIAVVTSAIVSLTLTPMMCSRLLKHARDERQVPGLATITAWIDRGAEAYH FT RSLLWVLKHQRATLVVTFLTIAATLVLYAIAPKGFLPLQDTASITAVTEAGPAVSFAEM FT KARQTETAQAIEADPDVVGVVSVIGAGSVNPTPNVGRLVLTLKPRGDRKSDVGEVIERL FT KQRVAGIPGMTVYFQAVQDVQISTQASRSQYQYTLTATDAALLSQWANRLLAELRRDPL FT FRDVSTEAQEGGLRAALDVNRERAGQLGVSVQAINDTLNDAFAQRQISTIYGQANQYRV FT VLEAMPVYQQDPSILSKLYVPGNAGAQVPISAVAELKRTIAPLAISHQAQFPSVAMSFN FT LAPDASLGEALKRIETIEKQIGMPGSIVGVFYGDAAEFSKALAGQPWLILAAIVAIYIV FT LGVLYESYIHPITILSTLPSAGVGAILALMLFGQDLSVIGLIGIILLMGIVKKNAIMMI FT DFALEAERGQGMSSYEAIVQACRLRFRPIMMTTLAALFGALPLAVESGTGSELRFPLGI FT SIIGGLLLSQLLTLYTTPVIYLALDRINRKLERALPPVPPATPSPPLAGAGEGL" FT sig_peptide 131347..131457 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.970) with cleavage site probability FT 0.951 atresidue 37" FT misc_feature order(131380..131448,132346..132405,132424..132492, FT 132646..132714,132733..132801,132931..132990, FT 133921..133989,134032..134100,134206..134274, FT 134317..134385) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 134478..137585 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2575" FT /product="possible RND efflux transporter" FT /function="InterPro IPR001036 COGs COG0841" FT /db_xref="GOA:Q6N6N9" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/TrEMBL:Q6N6N9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28016.1" FT /translation="MASMSDPFIRRPVGTTLLAIGLFLVGMVAYAVLPVAALPNVDFPM FT IMVQASRPGAAPSVMASTVAAPLERRLGEIAGLDQITSTSSLGNTRIQLQFSIGRNVDS FT AARDVQAAINAAVSDLPTDLPTLPKFRKFNSAAAPVYILALTSKTMPASAIYDVADTVL FT AQRISQVPGVGDVTVSGADQPAVRIALNPVALSNAGISTDDVRTAIINANPVGPVGSFD FT GPRLTETLSTNPQMRTAEQFRSIVIKSDTNGTVRLSDVATVSDATRNARTIAWYNKQPA FT VIIQITKQGDANVIETVDRVKALLPELKQWIPAGVDISVLADRTGTIRASVDDMQWTLL FT ATAVLVMAVVLLFLRRLTPTIAAGVSVPLALAGTCAGMWISGFSINNLSLMALAIAVGF FT VVDDAIVMIENMYRNLERGMAPLPAAMEGARQIGFTVLSISLSLVAAFAPLIFMDGLIG FT RLLREFSLTLTFAIVVSTVVSLTVTPMICAHYIRAEASPKQTWFDRAVEGTLNRIVGFY FT AWTLRGVLSVPWLTVVVFIATIALTVTLYIKVPKGYFPIDDSGFIIGSTRASADISFQS FT MRTLQEELADIVMADPAVSGVGSVLGGGGPGAGGANRGTMFINLKPTAEREGVTTQMVI FT DRLRRQLSRVAGIRLFMFAAQDLRGGGRSSESNYQYTLSSPDLDLLQKWAPIVAKRMQT FT VDGITDVTSDRDDGGLQLTLSIDRTMASRLGVRIQDIDNALNNAFSQRQIATIYTQRNQ FT YQVVLEIDPNFQTDPTDLKRIYVDSTSGDQVPLSAVVRAERGLAALAVAHTQGVPSTTV FT SFNTLPDVPLQEATANIQRAVDELHMPEGIRGSFDGNAGDFRATSNKQPLLILAAFIAM FT YIVLGVLYESLAHPLTIISTLPSAGLGALLALLVTGTELSVIAFVGIIMLIGIVKKNGI FT MMVDFALEAERERGLPSADAIFEACIVRFRPILMTTLAALFAAIPLVVAVGPGTELRRP FT LGITIIGGLFVSQVLTLYTTPVIYLLIDRVRQRRWRRGAPAAVPAE" FT sig_peptide 134478..134573 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.970) with cleavage site probability FT 0.758 atresidue 32" FT misc_feature order(134514..134582,135486..135539,135558..135626, FT 135639..135707,135768..135836,135879..135947, FT 136050..136118,136236..136304,137058..137126, FT 137184..137252,137361..137429,137457..137525) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 137593..138324 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2576" FT /product="conserved hypothetical protein" FT /function="COGs COG3148" FT /db_xref="InterPro:IPR005636" FT /db_xref="UniProtKB/TrEMBL:Q6N6N8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28017.1" FT /translation="MTTEHETHAAELGAPEPECARCGKVLPLCICDTVEPIASRTQLLI FT LQHPQEQDRALGTARLTAQHFKNAEVRIGLSWPSLSKALGRTVHDPSRWAVLYLGSARA FT AELAEGREILAVDAKGQPEPHQDMILDEIEGVVLLDGTWSQAKALWWRNAWMLKCQRVI FT LDPSAPSRYGRLRKEPRRDGLSTLEAAAMLLSRLEHRPEIETKLLEAFDRMLARFKQVQ FT AERPDLAPKPKKRDWRRKKRG" FT tRNA complement(138481..138554) FT /gene="tRNA-Cys1" FT /locus_tag="RNA_31" FT /product="tRNA_Cys" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 138737..140206 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2577" FT /product="putative alginate o-acetyltransferase AlgI" FT /function="InterPro IPR004299 COGs COG1696" FT /db_xref="GOA:Q6N6N7" FT /db_xref="InterPro:IPR004299" FT /db_xref="UniProtKB/TrEMBL:Q6N6N7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28018.1" FT /translation="MLFSSPVFLFLFMPLLLLVYWSVPRPLRNSVLLVASLVFYAWGER FT FFALVMLGSIFGNWLLGLALDALTDPGRRKLVVAAAVVLNIGLLAVFKYSEFLIANLNA FT LLETVGIAPVTVVAPHLPLGISFFTFHALSYVIDVYRGVARAQRRPVDFALYIAFFPQL FT IAGPIIRYHDISDQLRRRPVTLELAASGIERFLAGFGKKMLLANPLGEVADRIFALPAA FT ELSPGAAWLGLLCYTLQIYLDFSAYSDMAIGLARLFGFTFLENFNYPYLSQSLQEFWRR FT WHISLSNWLRDYLYIPLGGNRVAPWRVYVNLATVFLLCGLWHGANWTFVVWGLIHGLFL FT IFERLGLSTLLARMPRLLRHAYTLAVVSLAWVFFRATDLTHAIIYLKAMVGLGAGWSLD FT FLGDIDPLVVICLALGSLASAAVFSPLTADWRLRRNQNQGRVDPDIRTLQIGQDGVVMM FT TGRLIVLLTIGLLASSQVAAGTYNPFIYFRF" FT misc_feature order(138755..138808,138872..138931,138968..139036, FT 139079..139147,139643..139711,139721..139789, FT 139826..139894,139952..140020,140120..140188) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 140209..141342 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2578" FT /product="possible alginate o-acetyltransferase AlgJ" FT /db_xref="GOA:Q6N6N6" FT /db_xref="UniProtKB/TrEMBL:Q6N6N6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28019.1" FT /translation="MQRTPFSARLYSGALIGLAMAFSFASLIAMAFKHAEVSIGENRTL FT TQLPGWPRTVAQWDSFPERFDAYFNDNFGLRKLLLRLNSNFTTVMLGRSPSDKVVFGKD FT DWLFYAGDNSIELYRNQRPFSALQLANTEAALALRMRPLQAANRSYLFVVVPDKHTIYP FT EMMPTYMSRRDPPSQLDQVAALAEKDRLPVLDLRSTLRQGKADGQVYLKDDSHWTDWGA FT YLGYRRIMAALPLTDLPVLDLDAKQFAIPSDHAGDLAGMAGLTRRETTRLSELPADRCA FT FTASAYKPVGDDISIGRTFCPQAKYKIMFIGDSFTEALVKYLSRSFGEVVYVARSGFKP FT SREIAPLIEREKPDLVIEELAERHLDSLADTVAQEGR" FT sig_peptide 140209..140316 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.384 atresidue 36" FT misc_feature 140227..140295 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT terminator complement(141677..141698) FT /note="TransTerm prediction, 98+%" FT CDS complement(141725..142114) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2579" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6N5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28020.1" FT /translation="MIKSTMIAAAVFAGAVALTTAASAQQPTQYRGQLYGAETQRYSGY FT QDRGYQNRGYQDRDWRESNAFWPGQVAAGVVGGAIGAAGAIATAPFEAGYQGNYDMRSY FT AERNGFVCLPGTTFRGEDGRMHLCQ" FT misc_feature complement(order(141830..141895,142043..142093)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(142040..142114) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.985 atresidue 25" FT tRNA complement(142306..142380) FT /gene="tRNA-Asn1" FT /locus_tag="RNA_30" FT /product="tRNA_Asn" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 142633..143298 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2580" FT /product="possible protein-L-isoaspartate FT O-methyltransferase" FT /function="InterPro IPR000051:IPR000682 COGs COG2518" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6N4" FT /db_xref="InterPro:IPR000682" FT /db_xref="UniProtKB/TrEMBL:Q6N6N4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28021.1" FT /translation="MLEFERARQNMVDGQIRPASVTDWRIIDAMRALPREAFVPESKRE FT LVYLDLDLQIEGRDDHKHFLLNPIMTARMLQAAELQHDDRVLVVGCPTGYIAAVAAKLA FT ARVTTTIDDESLAQRIRATLPALGLSNVNVRVAEAAKGDLHDAPFDAILLCGATEVEPT FT TLYEQLKLGGRLVGAFATGRPQRVTVVTRSHGDYGARILFDASIPVLPGLERVPVFEF" FT CDS 143344..144900 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2581" FT /product="putative outer membrane protein" FT /function="InterPro IPR003423 COGs COG1538" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6N3" FT /db_xref="InterPro:IPR010130" FT /db_xref="UniProtKB/TrEMBL:Q6N6N3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28022.1" FT /translation="MPQLGSFAERRGRGVSSVHSVSYGEDGLTGHRSAVRTTLSAGSPV FT WGKVQDWIARMDGLKRISGLAAAGIVLACASQTVALADTMEGALVRAYQTNPQLNAQRA FT SVRATDESVPQALSGYRPKVAVTASGGYQYTDVISSVAGSQFHLSGTQIPRSVGVTASQ FT TLFNGNQTANRTRAAESQVSSAREGLRVLEQSVLLSAATIYMDYLRDSATLEVQRSNVR FT VLEQTLRQTNDRFNVGEVTRTDVAQSQAQLAAGNTQQLAAESTLTTTRSNYRRIIGTEP FT GNLAPGSPVDRYLPTSLAQAINLALVENPNVTAAMYGIDVSYLNVKINEGALFPTLTLQ FT ASAQQSWEPSISSPRQFQASGVAQLSVPIYQGGGEYALIRQSKETLAQQRLNLEQVRDQ FT TRASVVQAWGQLQAAKAQVSSAQSQVKASEIALNGVREEARAGQRTTLDVLNAQQALVN FT ARVALVTAQHDRVVASYAVLNAVGRLSPQVLGLKTDVYDPSVHYHQVRDSWGGVRTPDG FT R" FT CDS 145193..145981 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2582" FT /product="unknown protein" FT /function="InterPro IPR000694" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR019632" FT /db_xref="UniProtKB/TrEMBL:Q6N6N2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28023.1" FT /translation="MTQPAKAQEPSMEEILASIRRIIADDEAKPATPAPAPAAVAPKPE FT PPKPAPPPSKPAAMTPPPSAPSPVAQAAPPKPAAAPKPAPPPMPAPAESNSQDDIDALL FT AGLDAGTTEEEVRPPQPDGDVLELTDEMALPEPEPEPAPPPPPPPPPPVQKAPIEDDIE FT FAEAAPKPRAPEPAYEPPAAAAAWSEEPQQPILSRTTAAAVESAFNSLATTVLSNNART FT LEDLVKEMLRPMLKAWLDDNLPTLVERIVRQEIERVSRGR" FT CDS 146123..148996 FT /codon_start=1 FT /transl_table=11 FT /gene="valS" FT /locus_tag="RPA2583" FT /product="valyl-tRNA synthetase" FT /function="InterPro IPR001412:IPR002300:IPR002303 COGs FT COG0525" FT /EC_number="6.1.1.9" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6N1" FT /db_xref="InterPro:IPR019499" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6N1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28024.1" FT /translation="MIEKTYQPADIEARISRAWEDAEAFKAGRPERRDAVPYSIVIPPP FT NVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQLMERQEPS FT RRDMGRAKFLERVWQWKAESGGVIVNQLKRLGASCDWSRERFTMDEGLSRAVAKVFVEL FT HRQGLIYKDKRLVNWDPKLLTAISDLEVQQIEVKGNLWHLRYPIEGKTFDPADPSSFIV FT VATTRPETMLGDSAVAVNPEDERYTHLVGKHVILPLVGRRIPIVADEYSDPEKGSGAVK FT ITPAHDFNDFEVGKRHHLPQINVLDIEGKISVADNSAYLEGLPEGAREFAGEIDGTDRF FT VARKIIVARLDDFGFLEKIEPNVHMVPHGDRSGVVIEPFLTDQWYVDAKTLAQPAIAAV FT RSGETTFVPKNWEKTYFEWMENIQPWCISRQLWWGHQIPAWYGPDGKVFVAETEEEAVG FT NALGYYVEQEVITPAQAHDMAEDPAKREGFITRDEDVLDTWFSSALWPFSTLGWPDETP FT ELDRYYPTNVLVTGFDIIFFWVARMMMMGLHFMDDVPFPTVYIHALVRDEKGAKMSKSK FT GNVIDPLNLIDEYGADALRFTLAAMAAQGRDIKLATSRVEGYRNFATKLWNACRFAEMN FT GCVAPAGFDYTAAKETLNRWIAHETVRAVREVTEAIESYRFNDAAEAAYRFVWNVYCDW FT YLELAKPVLMGEEGAAKTETRAMVAWARDEILKILHPFMPFITEELWAVTAPRDGLLAL FT APWSRKGGISDEEVSVLAASAATDPMAGPAMLAIPEPQEPDFTDDAAEAEIGWVVDLVT FT AIRSVRAEMNIVPSTLTPLVLAGASADTNARASRWSDVIKRLARVGEISFADAAPQGAV FT QLLVRGEVAALPLKGVVDFAAEQARLEKELGKAEADIKRAEAKLANEKFVANAAEEVVE FT EEREKREAAVARKVKILEALLRLKNAS" FT CDS 149000..149386 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2584" FT /product="possible glyoxalase" FT /function="COGs COG0346" FT /db_xref="UniProtKB/TrEMBL:Q6N6N0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28025.1" FT /translation="MLDHVSITVSDIAVAEPFYDAIMAALGVVKVGARGDWLGYGERAR FT PEHPDRVYLSIRKGDRPEPAYGRHWCFKATSRAVVDAFWQAGLAHGGVDQGAPGLRDYH FT PGYYAAFIADPDGNRLEAVCHTLG" FT CDS 149588..150148 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2585" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6M9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28026.1" FT /translation="MLAFLKLLISFAPWLSFLIIARNSLLRVEIGLCVALALTIVMGVL FT KLHRGIILWVGVVFFGAATIAVMGFNDTWTLRHLGVLANGALAAGAWLTILLGKPFTLD FT YAKEHVDPAVWNDPKFIRINVLMTGIWATAFTINAALAFGKMEQVALPELAYELISYAV FT LIGTAIFTVWYPDHLRRARAAAS" FT misc_feature order(149591..149650,149663..149722,149735..149794, FT 149822..149890,149948..150016,150059..150112) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(150334..151011) FT /codon_start=1 FT /transl_table=11 FT /gene="3mg" FT /locus_tag="RPA2586" FT /product="possible DNA-3-methyladenine glycosidase" FT /function="InterPro IPR003180 COGs COG2094" FT /EC_number="3.2.2.21" FT /db_xref="GOA:Q6N6M8" FT /db_xref="InterPro:IPR003180" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6M8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28027.1" FT /translation="MLELYALRPAPAAPELASPMTKSRAPKPPSDGTHPALGPLLTRWF FT FARSVHEVAPELIGATLLFGGAGGIIVEVEAYHHTDPAAHSYGGPTPRNQVMFGPPGFA FT YVYRSYGIHWCVNVVCEPEGSASAVLIRALEPTHGLAAMRKRRGLDEPRSLCSGPGKLA FT QALGITIADNGLPLDAAPFAIHRRTTTPEIVAGPRIGITKAADYPWRFGLKDSRFLSKP FT FPR" FT CDS 151104..152063 FT /codon_start=1 FT /transl_table=11 FT /gene="lipA2" FT /locus_tag="RPA2587" FT /product="lipoic acid synthetase" FT /function="InterPro IPR003698:IPR006638 COGs COG0320" FT /EC_number="2.8.1.-" FT /note="Citation: Hayden et al. (1992) J. Biol. Chem. FT 267:9512-9515" FT /db_xref="GOA:P61198" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/Swiss-Prot:P61198" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28028.1" FT /translation="MVVLVDTVSANPVRPRHPEKAARPDALSPKKPDWIRVRAPTTRGY FT GETRGIVKENGLHTVCEEAGCPNIGECWDKKHATFMIMGDTCTRACAFCNVKTGMPGAL FT DANEPAYVAEATRKLGLQHLVITSVDRDDLADGGAAHFAATIRAVREACPTTTIEILTP FT DFLRKDGALEVVVAAKPDVFNHNLETVPSRYLSVRPGARYFHSIRLLQRVKELDPSIFT FT KSGIMVGLGEERHEVLQVMDDLRSAEVDFLTIGQYLQPTRKHHAVMRYVTPDEFAGYQT FT TAYAKGFLMVSASPMTRSSHHAGDDFAKLKAARAARAR" FT CDS 152090..152563 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2588" FT /product="Protein of unknown function UPF0083" FT /function="InterPro IPR005340 COGs COG2867" FT /db_xref="InterPro:IPR005031" FT /db_xref="UniProtKB/TrEMBL:Q6N6M7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28029.1" FT /translation="MPQFSNRRRVPHSAQQMFDLVADVERYPQFVPLCKALKIRERIQQ FT PDGNEVVIADMTVSFKLVQETFTSRVTLDRANLKILVEYLKGPFSNLENRWTFAAKTER FT ACEVGFFIAYEFKSRMLATLMGAMFDTAFHRFAEAFETRADQIYGTGPKLSRA" FT CDS complement(152645..153265) FT /codon_start=1 FT /transl_table=11 FT /gene="cinA" FT /locus_tag="RPA2589" FT /product="possible competence-damaged protein" FT /function="InterPro IPR003396 COGs COG1546" FT /db_xref="InterPro:IPR008136" FT /db_xref="UniProtKB/TrEMBL:Q6N6M6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28030.1" FT /translation="MSSNDARALARSLLDLCRSRKLLIATAESCTGGLVAGALTDIPGS FT SDVIDRGFVTYSNAAKHDLLGVENATLTTFGAVSKETAIAMAVGALENADVDLAVSITG FT IAGPGGATPGKPVGLVHFAVAARDGRISHREQRFGAIGRSNVRQRSVVEALRMLLEVAR FT GPKPPTKAKREVATGVHKRVARSPRRVAAKRPQPKRPVKPKKT" FT CDS complement(153268..154464) FT /codon_start=1 FT /transl_table=11 FT /gene="ispD" FT /locus_tag="RPA2590" FT /product="4-diphosphocytidyl-2C-methyl-D-erythritol FT synthase:YgbB" FT /function="InterPro IPR001228:IPR003526 COGs COG0245" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6M5" FT /db_xref="InterPro:IPR003526" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6M5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28031.1" FT /translation="MTNSPRTAAIIVAAGRGLRAGAGGPKQYRSLAGRPVIARAMEPFC FT THPGVMAVQPVTNPDDTEMFNAAVAGLNFRPAVGGGATRQASVRAGLEALAELKPDIVL FT IHDAARCFVTPELISRAITAAGATGAALPVVPVTDTIKQVDSSGAVDATPDRASLRIAQ FT TPQAFRFDVILDAHRRAASGGRDDFTDDAAIAEWAGLTVSTFEGDANNMKMTTPEDFAR FT EESRLMAALGDIRTGTGYDVHAFGEGDHVWLCGLKVPHTRGFLAHSDGDVGLHALVDAI FT LGALADGDIGSHFPPTDPQWKGAASDKFLKYAIDRVTARGGRVANLEVTMICERPKIGP FT LRDAMRQRIAEITGVPVSRVAVKATTSEKLGFTGREEGIAATASATIRLPWGADGLAG" FT sig_peptide complement(154396..154464) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.818) with cleavage site probability FT 0.665 atresidue 23" FT CDS 154738..155739 FT /codon_start=1 FT /transl_table=11 FT /gene="nifR3" FT /locus_tag="RPA2591" FT /product="putative nitrogen regulation protein nifR3" FT /function="InterPro IPR001269:IPR003009:IPR004652 COGs FT COG0042" FT /note="Citation: Foster-Hartnett et al. (1993) Mol. FT Microbiol. 8:903-914" FT /db_xref="GOA:Q6N6M4" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q6N6M4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28032.1" FT /translation="MRIGNIAVPDPVFLAPMTGITDVPFRRQVAELGAGLVVSEMTASE FT DLVAGRRMSVRRCDKVGQGPHVVQLAGCEARWMAEGARIAEAGGADIIDINMGCPARHV FT TGGLSGSALMRDLDHALTLIEATIGAVRVPVTLKMRLGWDDRSRNAPELARRAQDAGVQ FT LVTVHGRTRQQFYKGEADWDAVRAVRDAISIPLVVNGDITCHASAVEALKRSGADAVMI FT GRGAQGRPWLPGQVGRQLTTGKAEGEPSLTMQRDYLRTLYDDILALYGVKIGLRHARKH FT LGWSLEVAASTAGASPDVLKSWRAVILTEENPARVHRALADAYEEFAWRAAA" FT CDS 155736..156908 FT /codon_start=1 FT /transl_table=11 FT /gene="ntrB" FT /locus_tag="RPA2592" FT /product="nitrogen regulatory signal transduction histidine FT kinase NtrB" FT /function="InterPro FT IPR000014:IPR003594:IPR003661:IPR004358:IPR005467 COGs FT COG3852" FT /EC_number="2.7.3.-" FT /note="observed by proteomics" FT /note="Citation: Foster-Hartnett et al. (1993) Mol. FT Microbiol. 8:903-914" FT /db_xref="GOA:Q6N6M3" FT /db_xref="InterPro:IPR005467" FT /db_xref="UniProtKB/TrEMBL:Q6N6M3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28033.1" FT /translation="MNAIVEPRRAQPTDSDAILNALPNPVLLVGPDGKIVDANMAAESF FT FEISTQLLRRQSLTDLVPFGSPLLALIEQVRVGHSPVNEYKVDLGTPRIGADRQVDLHV FT APLNERPGHIVVMLQERTIADKMDRQLTHRSAARSVIALAAMLAHEIKNPLSGIRGAAQ FT LLEQQASAEDRMLTRLICDEADRIVTLVDRMEVFGDDRPVARGPVNIHSVLDHVKRLAQ FT SGFARNIKFIEDYDPSLPPVLANQDQLIQVFLNLVKNAAEAVVDLGSDGEIQLTTAFRP FT GVRLSVPGKKTRVSLPLEFCVRDNGPGVPEDLLPNLFDPFVTTKPSGSGLGLALVAKIV FT GDHGGIIECESQPRKTTFRVLMPMFNTAKALQSPNGEDAPASSDASQTAR" FT CDS 156918..158360 FT /codon_start=1 FT /transl_table=11 FT /gene="ntrC" FT /locus_tag="RPA2593" FT /product="nitrogen assimilation regulatory protein ntrC FT Response regulator" FT /function="InterPro IPR001789:IPR002078:IPR002197:IPR003593 FT COGs COG2204" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6M2" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/TrEMBL:Q6N6M2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28034.1" FT /translation="MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQ FT GEGDLVITDVVMPDENAFDLLPRIKKLRPNLPVIVMSAQNTFMTAIRASEKGAYEYLPK FT PFDLKELIAIVGRALAEPKERISSANDEGEFDSIPLVGRSPAMQEIYRVLARLMQTDLT FT VMITGESGTGKELVSRALHDYGKRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANT FT RASGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASN FT KDLRVLIQQGLFREDLFFRLNVVPLRLPPLREHIEDLPDLVRHFFALAEKDGLPAKKLD FT AAALERMKQHRWPGNVRELENLARRLAALYPQEVITASVIDGELAPPPVVAGGSAPHTV FT DNLGGAVEMYLSSHFSGFPNGVPPPGLYHRVLREIEVPLLTAALAATRGNQIRAADLLG FT LNRNTLRKKIRDLDIQVYRTGG" FT CDS 158520..160811 FT /codon_start=1 FT /transl_table=11 FT /gene="ntrY" FT /locus_tag="RPA2594" FT /product="nitrogen regulatory signal transduction histidine FT kinase NtrY" FT /function="InterPro FT IPR000014:IPR003594:IPR003660:IPR003661:IPR004358:IPR005467 FT COGs COG0642" FT /EC_number="2.7.3.-" FT /note="Citation: Pawlowski et al. (1991) Mol. Gen. Genet. FT 231:124-38" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6M1" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q6N6M1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28035.1" FT /translation="MTSAETSAQPVDDPSTAEPRLRTWRKLLAPMAVGVALFSAFLTFI FT VLTGLTPIAPTREVVVSFLLINAVTILLLLAIIAREVWKVVQARRRGRAASRLHIQIVS FT LFSVIAVLPAVLVSIVANVTLDRGLDRLFSGPTRAVIQNSLIVANAYLHEHGQLIRGDI FT LGMANDISHARALFDLDRKSFREFLTNDAATRNLPGAMLIDKDRNILEAAQNGIRRDFD FT VPAPEFLKNVDDTEPQIAVFIEANYVAAVIRLKGFEDTFLYVARFLDPHVVAQLRQTQA FT SVAEYSELEARRLGVQVAFALMFTVIALTVLMSAVLIGLNFANWLVAPIRRLMGAAHLV FT STGDLHVQVPVSKSEGDLSQLGMTFNKMTQELRTQRDELVSASELIDSRRRFIEAVLSS FT ASAGIIGVDGSLSIGILNRSAEKLIGHAEAEALGHPLSEVIPELDEIMGTAREGSQRLV FT QGQITIVRDGRERILNVRVTAEQTGHTSDSYIITLDDITELVSAQRTSAWGDVARRIAH FT EIKNPLTPIQLSAERIKRKFGKVIVEDKNIFEQCTDTIVRQVDDIRRMVDEFSRFARMP FT KPVIEGEDVGDTVRQVVFLMRVGHPDVDIEAEIKDEPLHARFDRRLISQALTNIIKNAT FT EAIEAVPEEELGKGKIEVVAAREGDDVVIDVIDNGIGLPKESRSRLLEPYVTTREKGTG FT LGLAIVGRVLVDHGGGIELNDASHVRPGQRGAWMRLRFAMSGQPASPPGSGEPKQQAEN FT EPRIAAASGS" FT misc_feature order(158598..158666,158694..158762,158823..158891, FT 159417..159485,159702..159770) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 160828..162195 FT /codon_start=1 FT /transl_table=11 FT /gene="ntrX" FT /locus_tag="RPA2595" FT /product="nitrogen assimilation regulatory protein FT ntrX-Response regulator" FT /function="InterPro IPR001789:IPR002078:IPR002197:IPR003593 FT COGs COG2204" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6M0" FT /db_xref="HSSP:1B00" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N6M0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28036.1" FT /translation="MANDILIVDDEADIRDLVAGILEDEGFSTRTARDSDSALAEIANR FT RPNLIFLDIWLQGSKLDGLQLLEQIKKDHTDVPVVMISGHGNIETAVAAIKRGAYDFIE FT KPFKSDRLILVATRALETSRLKREVRELKQLAPSASTLVGRSACINQLRQTIERAAKAN FT SRILIVGPSGAGKELAARTLHNSSSRADGPFVVINAAAITPEKMEIELFGVEANGEHSR FT KAGALEEAHGGTLFIDEIADMPRETQNKILRVLVEQTFQRCGGTTKVNVDVRIISSTAR FT NLEEEITAGRFREDLYHRLSVVPIRVPPLSERRDDIPELIEYFMEQISAATGLPRRQIG FT QDAMAVLQSHVWPGNVRQLRNNVERLMILAGGGPDAVITADMLPQDVGSMVPTMPTGNN FT GEHIMGLPLREAREAFERDYLIAQISRFSGNISRTAEFVGMERSALHRKLKALGVG" FT CDS 162236..163093 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2596" FT /product="D-alanine aminotransferase" FT /function="InterPro IPR001544 COGs COG0115" FT /EC_number="2.6.1.21" FT /db_xref="GOA:Q6N6L9" FT /db_xref="HSSP:1A0G" FT /db_xref="InterPro:IPR001544" FT /db_xref="UniProtKB/TrEMBL:Q6N6L9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28037.1" FT /translation="MSRIAYVNGRYLDMRDASVNIEDRGYQFADGVYEVCEVRGGKLID FT MPRHLARLQRSLGELRIKEPMPLAALSVVMHEVVRRNRVSHGIVYLQVTRGVARRDHGF FT PAAPVKPAVVVTARSLDPAKGQANAAHGIKVITLPENRWPRVDIKSTALLPNVLAKQVA FT REAGAYEAWYVDRDGYVTEGSSSNAWIVTKEGRVVTRSADAGILAGVTRAVLMDAFEAL FT QVRFEERPFTPAEAAGAAEAFVTASSQIVMPVVAIDGQPIGDGKPGALAKRLREQFHRF FT AVFS" FT CDS 163275..163523 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2597" FT /product="probable nfrA protein" FT /function="InterPro IPR005001 COGs COG1923" FT /note="Citation: Kaminski et al. (1994) Proc. Natl. Acad. FT Sci. U.S.A. 91:4663-4667" FT /db_xref="GOA:Q6N6L8" FT /db_xref="InterPro:IPR001163" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6L8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28038.1" FT /translation="MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFC FT LLLRRDGHSQLVYKHAISTIMPGAPIQLFESGEDSPA" FT CDS 163628..164902 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2598" FT /product="GTP binding protein-like" FT /function="InterPro IPR001687:IPR005829 COGs COG2262" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6L7" FT /db_xref="InterPro:IPR002917" FT /db_xref="UniProtKB/TrEMBL:Q6N6L7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28039.1" FT /translation="MRRGDPDAVDTAVRDNDARLDEAAGLARAIDLDVVEAVLTPISQI FT RPATYLGKGKVEEIVGLIAAHGADLIVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIF FT GRRAKTREGTLQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGE FT RITKLEAELKKVQATRRLHRAGRQRVPYRVVALVGYTNAGKSTLFNRLTRADVQAADML FT FATLDPTLRAIQLPHGGKAMLSDTVGFISNLPTQLVAAFRATLEEVLEADLILHVRDIS FT HEDAEAQQHDVDNVLRQLGVDAASGRIVEVWNKIDRFEPEQRDELKNIAARRPEDHPCL FT LVSAVSGEGVDELLLSIEQRLAATRTVLDLSIDAADGAGVSWLHRNTEVLAKDLVDGRY FT AMTVRVEDNKRDIVIDRFGAVPRPD" FT CDS 165183..167846 FT /codon_start=1 FT /transl_table=11 FT /gene="gyrA" FT /locus_tag="RPA2599" FT /product="DNA gyrase subunit A" FT /function="InterPro IPR002205:IPR005743:IPR006691 COGs FT COG0188" FT /EC_number="5.99.1.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6L6" FT /db_xref="HSSP:1AB4" FT /db_xref="InterPro:IPR013758" FT /db_xref="UniProtKB/TrEMBL:Q6N6L6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28040.1" FT /translation="MKRSYLDYAMSVIVARALPDARDGLKPVHRRILYGMYENGFEWNK FT QYRKSARTVGDVIGKYHPHGDQSVYDALVRMAQDFSMRVPLIDGQGNFGSVDGDMPAAM FT RYTESRLTKIAQTLLDDIDKDTVDFQPNYDNSEREPQVLPAKFPNLLVNGAGGIAVGMA FT TNIPPHNLGEVIDACIALIDDPALSIDDLNKIVPGPDFPTGGIILGRAGIRAAYQTGRG FT SIVMRGKVEIETVRKDREAIIVSEIPYQVNKATMVERIAELVREKKIEGIGDLRDESDR FT DGFRVVIELRRDAVPEVVLNQLYKFTPLQTNFGANMVALEGGRPQLMNLKDLLTVFVAF FT REQVVTRRTKFLLNKARDRAHILVGLAIAVANIDEIIRVIRNSPDPNTARETLMSRDWP FT AADVAAMITLIDDPRHKLNPDGTARLSFEQAKAILDLRLQRLTALGREEISEELDKLAV FT EIADYLEILRSRARVQAIVKTELGEVKAEFATPRRTVIAEQEGEVEDEDLIQREDMVVT FT VSHAGYVKRVPLSTYRAQRRGGKGRSGMATREEDFVSRLFVASTHTPVLFFSSRGQVYK FT EKVWRLPLAPPNGRGKALINILPLEQGERITTIMPLPEDEASWSELDVMFATTGGNVRR FT NKLSDFVDVRRSGIIAMKLDEGEAIVDVQICTERDDVLLTAAGGQCIRFPVPDVRVFSG FT RTSMGVRGIALSSGDTVISLSILRHFEATPAERSTYLKQSGAIRRAATGEENEPVETPE FT AEAEEGDTSAALSQERYAEMSASEQFVLTISENGYGKRTSSFEYRTTGRGGKGIVAMSV FT NSRNGKLVASFPVEDSDQIMLVTDNGQLIRCPVEGIRVAGRSTQGVIVFNTADDEKVVS FT VERIPETDDGENGNGG" FT CDS 168031..168450 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2600" FT /product="hypothetical protein" FT /function="InterPro IPR001687" FT /db_xref="UniProtKB/TrEMBL:Q6N6L5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28041.1" FT /translation="MSFRSHQPSLTDRRVAGICVTKARRFEIRPSLLGAGSAEGTDVEP FT VTLGQSLGDAGLDLRGEARKNGDRRGGKGGNRDHGKSLEHDGVPCRLDVRPFRPGVLCR FT FPMRPVYPALVSERLHRRAIQVSSRRRFVSWLSGA" FT CDS 168624..169133 FT /codon_start=1 FT /transl_table=11 FT /gene="kdtB" FT /locus_tag="RPA2601" FT /product="phosphopantetheine adenylyltransferase" FT /function="InterPro IPR001980:IPR004820:IPR004821 COGs FT COG0669" FT /EC_number="2.7.7.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6L4" FT /db_xref="HSSP:1B6T" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6L4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28042.1" FT /translation="MSRIALYPGSFDPVTNGHLDVVRHAVALCDKLVVAIGIHPGKKPL FT FTTEERLAMVERVFGPVAKAAGCDFGCTTYDNLTVTAAEKVGATLMIRGLRDGSDLDYE FT MQIAGMNETMAPAIHTVFLPASVGVRPITATLVRQIAAMGGDVSAFVPAEVASALKSKF FT AAGSPA" FT CDS 169150..169713 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2602" FT /product="peptidyl prolyl cis-trans isomerase" FT /function="InterPro IPR002130 COGs COG0652" FT /EC_number="5.2.1.8" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6L3" FT /db_xref="HSSP:1A58" FT /db_xref="InterPro:IPR002130" FT /db_xref="UniProtKB/TrEMBL:Q6N6L3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28043.1" FT /translation="MIRLIGIFAALLFALPALAQPLPANLDKQNALVIDTTKGRIVIAL FT RADIAPKHAERLKQLAREGFYNNVPFHRVMGGFMAQTGDGQNFNGTGGSKYPNLKQEFS FT NVPFTRGVVGMARRGDSVDSANSQFFIMFADGPSLNGQYTVIGNVVSGMDVVDKLKKAS FT PTSPGGAVTDPDKMVKVQVASDVK" FT sig_peptide 169150..169209 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 20" FT CDS 169723..170166 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2603" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR014587" FT /db_xref="UniProtKB/TrEMBL:Q6N6L2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28044.1" FT /translation="MLPRRLNAVAVAFLAGAIGLTVRPASAQNAPIDNLNALFSAMKQC FT WRSPRLPAGNPGMQITVLVSFTRSGEILGKPRITFESPEAGRDDSLAYRVAVMEALQRC FT TPLPFTPSMGGAVAGRPFTLRFDDRRQSPKPTEKRAWLITTTS" FT sig_peptide 169723..169806 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.954 atresidue 28" FT CDS 170142..170609 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2604" FT /product="peptidyl prolyl cis-trans isomerase" FT /function="InterPro IPR002130 COGs COG0652" FT /EC_number="5.2.1.8" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6L1" FT /db_xref="HSSP:1A58" FT /db_xref="InterPro:IPR002130" FT /db_xref="UniProtKB/TrEMBL:Q6N6L1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28045.1" FT /translation="MADNDNILILETTQGTVKIEMRPDLAPNHVARIKELVREGFYDGI FT VFHRVIEGFMAQTGCPQGTGMGGSGKKLKAEFNAEPHVRGVASMARAANPDSGDSQFFI FT CFDDARFLDKQYTVWGKVIEGMENVDKIKRGEPVKDPDKIVKATIAADAAA" FT CDS 170766..171860 FT /codon_start=1 FT /transl_table=11 FT /gene="queA" FT /locus_tag="RPA2605" FT /product="S-adenosylmethionine tRNA ribosyltransferase" FT /function="InterPro IPR001993:IPR003699 COGs COG0809" FT /EC_number="5.4.99.-" FT /db_xref="GOA:Q6N6L0" FT /db_xref="InterPro:IPR003699" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6L0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28046.1" FT /translation="MQNLMRTELFDFDLPAENIALRPVSPRDAARMLVVRPGAPLEDRI FT VRDLPALLAPGDQLVVNDTRVIAAQLTGRRIGRGLEPKIEATLIKRLDGARWQALVKPA FT KKLLPGDVVRFGHDGRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPL FT PPYIASKRAPDAQDIADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLH FT VGAGTFLPVKAEDTSEHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAA FT RDDGRIAPFADETSIFITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAH FT AIRTGYRFYSYGDASLLFRNDITP" FT CDS 171857..172990 FT /codon_start=1 FT /transl_table=11 FT /gene="tgt" FT /locus_tag="RPA2606" FT /product="tRNA guanine transglycosylase" FT /function="InterPro IPR002616:IPR004803 COGs COG0343" FT /EC_number="2.4.2.29" FT /db_xref="GOA:Q6N6K9" FT /db_xref="HSSP:1K4G" FT /db_xref="InterPro:IPR002616" FT /db_xref="UniProtKB/TrEMBL:Q6N6K9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28047.1" FT /translation="MTVPNHFELIGTDGAARTGRLTTPHGVVRTPAFMPVGTAGAMKGL FT HWREVRDAGADIVLGNTYHLMLRPGAERIAALGGLQRFTTWNGPMLTDSGGFQVMSLAQ FT LRKVNEQAVTFRSHIDGAAIELSPERAIEVQRLLGSDIAMQLDECVRLPADRADIERAM FT QLSLRWAERCKRAFETAPDGYMLFGIVQGGDVPELRHASAQGLIDIGFHGYAIGGLAVG FT EPQDVMLAMIEEAAPILPAERPRYLMGVGTPEDMLEAVARSIDMFDCVMPTRNGRHGLA FT FTQYGPINLRNAKHADDPRPLDEESDWPSARTYSRAYLHHLVRSSETLGAMLLSEINIA FT YYQRLMRDIRAAIAVGQFEEFRLRTRAAWERGDIAAR" FT CDS complement(174067..174690) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2607" FT /product="possible transcriptional regulator, XRE family, FT CUPIN domain" FT /function="InterPro IPR001387:IPR001687:IPR007113 COGs FT COG1396" FT /db_xref="GOA:Q6N6K8" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q6N6K8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28048.1" FT /translation="MSDASFRLESHETEAKHVSVDLPSIVGHNLRRLRVRQGYSLERLA FT KQSGVSRAMLGQIETGKSVPTIGTLWKVATALGVPFARLIATESPHHPQVLRRTDAKLL FT TSNQGQFTSRALFPFDGERQVEFYELRLAPLHREDADPHAAGTRENLVVAKGAVEITAG FT AERPVVLSAGDAILFDADVPHSYRNLGAEEAVLFLVMTYVESIG" FT CDS complement(175255..176208) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2608" FT /product="possible sulfonate binding protein" FT /function="InterPro IPR001638:IPR004872 COGs COG0715" FT /db_xref="GOA:Q6N6K7" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q6N6K7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28049.1" FT /translation="MMSSRRSLFALAFAAIAASSIGFASAADLKEVRIGFQKAGIQPAV FT KERGVLEAALKEKGLSVKWVEFAFGPPLLEALNTGNIDFGYTGDTPPIFAQAAAANLLY FT VAALPGSGKNEGIVVPANSPIKSVADLKGKRLAIPKGSSAHNTAVAILEKAGLQFTDVT FT AVYLPPADGTAAFAGGTVDAWAIWDPYLALAEKSSARVLSFAGDAHDSIGFFLANREFT FT NAHGDLVALLNQTFAKEAQWANGHRDEITKSLAASTGVDPAVVSTLVGRSVFEVTPVTD FT KILAEQQQTADRFHKLGLIPKPINVRDIVWKWSPAS" FT misc_feature complement(176122..176187) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(176128..176208) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.958 atresidue 27" FT CDS complement(176370..176939) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2609" FT /product="possible monooxygenase" FT /function="InterPro IPR002563 COGs COG1853" FT /db_xref="GOA:Q6N6K6" FT /db_xref="InterPro:IPR002563" FT /db_xref="UniProtKB/TrEMBL:Q6N6K6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28050.1" FT /translation="MTLAIEDRLRSASPAEFAHAMRQLASGVSVITAGKGSTRVGMTAT FT AVTSLSATPPTLIVCLNQKSSAGPLIACSHAFAVNILAADQIEIGERFAGKGGLKGAAR FT FAGGTWNTGISGAPVLAGALANIECELDEVIERHTHAILVGRVVHTSTLPRKASLTYWQ FT GSYVAIDRDEDLVRLAEVSVPSAKHG" FT CDS complement(176950..177795) FT /codon_start=1 FT /transl_table=11 FT /gene="ssuB" FT /locus_tag="RPA2610" FT /product="aliphatic sulfonate transport ATP-binding FT protein, Subunit of ABC transporter" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1116" FT /note="Citation: Vermeij et al. (1999) Mol. Microbiol. FT 32:913-926" FT /db_xref="GOA:Q6N6K5" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6K5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28051.1" FT /translation="MTMEALQFLLAAPPGAYDPVARTIEDEPRPSQPPTSALALDIRGL FT RKSFGDNDVLRGIDLHIPAGQFVTIVGRSGCGKSTLLRLIAGLETPTAGHIVFGEDKLP FT GDVRVMFQEPRLLPWARVLANVEVGLGTERNSPDARARADAALIEVGLDDKRGEWPAVL FT SGGQKQRVALARALVSRPRVLAFDEPLGALDALTRIAMQRLLEQVWQAQGFTAILVTHD FT VAEAVALADRVLVIEDGRIAKDLPIDLPRPRQRGSAELAALEGEILRDLLKGAEDTFEL FT " FT CDS complement(177800..178606) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2611" FT /product="putative aliphatic sulfonate transport membrane FT component. Permease subunit of an ABC transporter" FT /function="InterPro IPR000515 COGs COG0600" FT /note="Citation: Van Der Ploeg et al. (1999) J. Biol. Chem. FT 274:29358-29365" FT /db_xref="GOA:Q6N6K4" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6N6K4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28052.1" FT /translation="MSLVETLARPRAWRLPRPDGLIQWIVPLLIILVWQAACSLGFVSA FT RVLPAPSDVIVAGWKLLQSGELVRNIWVSFWRASVGFAIGGSIGFAFGLANGLSSLSAK FT LSDTTLQMVRNVPHLALIPLVILWFGIDEEAKLFLVALGVFFPIYLNTLHGIRSVDPQL FT IEMGRIYGMSNVELFRRVIFPGALPSVFVGVRFALGIMWLTLIVAETIAASSGLGYMAM FT QAREFMLIDVVVLSILIYALLGKLADSASRLLERQTLSWHPAFQRS" FT misc_feature complement(order(177875..177925,177947..178012, FT 178025..178075,178139..178195,178211..178261, FT 178301..178366,178478..178543)) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(178603..179778) FT /codon_start=1 FT /transl_table=11 FT /gene="msuD" FT /locus_tag="RPA2612" FT /product="methanesulfonate sulfonatase MsuD FT (monooxygenase)" FT /function="InterPro IPR002103 COGs COG2141" FT /note="Citation: Kertesz et al. (1999) J. Bact. FT 181:1464-1473" FT /db_xref="GOA:Q6N6K3" FT /db_xref="InterPro:IPR016048" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6K3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28053.1" FT /translation="MTAPQTPSSNFLWFLPTHGDGHYLGTSNGGRDVNFGYLRQIAQAA FT DQLGYFGVLLPTGRSCEDSWVVASAVAPWTERLRYLVAVRPGLQSPSVAARMTATLDRL FT IGGRLLVNVVTGGDPVENKGDGVFLSHDERYEVTREFLNVYSDLLSGKTVNVAGKHITI FT EDGRLLFPPVQSPRPPLYFGGSSDAGIDVAADTVDKYLTWGEPPAQVAEKVNRVRAVAE FT QRGRKLSFGIRLHVIVRETNEAAWAAADDLIRYVTDDTIAAAQKVFARMDSVGQQRMSE FT LHGGRRDKLEISPNLWAGVGLVRGGAGTALVGDPQTVAARIKEYQDVGIDTFILSGYPH FT LEEAYRFAELVFPLVKPQHAGNVTPLRANTGPFGETIANEHLPNAKQAVKP" FT CDS complement(179823..180770) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2613" FT /product="putative aliphatic sulfonate binding protein, FT subunit of ABC transporter" FT /function="InterPro IPR001638:IPR006311 COGs COG0715" FT /db_xref="GOA:Q6N6K2" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:Q6N6K2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28054.1" FT /translation="MQRRQFLQLSAGTALLPILSRSAAAEPLTEIRIGYQKNGVLVIAR FT QRRTLEDHFAAQNIGIKWLEFSSGPPMLEAMNVGSIHYGAVGDAPPIFAQAAGAAIVYA FT AGQPITNGQGILVPKDSPIRGLADLKGKRIGFTKGSSAHNVVLLALKKAGLTYGDITPV FT YLSPPDAGPAFAQGSIDAWSIWDPYFAIGELKQNGRVLINASEVGRTNSFYIANREFAQ FT RNALILKQIIDVTSATARWAEDHRGDVAQSLSAVTGIPLDIQTIAANRSSFVVGPVTDE FT IVSTQQDVADRFHQLGLIPRPIVVRDAVWRPPQA" FT sig_peptide complement(180693..180770) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.962 atresidue 26" FT CDS 181157..182434 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2614" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6N6K1" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q6N6K1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28055.1" FT /translation="MICGPPDGLRCRGAITDGTYMPTVSELKEGLWRELALKAELGING FT VAISGEALDFVQPGIKAQEQVHCLFEMDFETHTVELPSHFYLPLGLSVPFRWNPKSGYR FT VDLIGDRTVLIDGSEVIAEIRFRERPAFYGAKTSDGIEMAQIGAHYADRHLFVVYSNEC FT SYKDKGEDCLFCNINYTKDVYGDKGGVFWKNARQIGETAARAYNDGAIDHLTVSGGVIP FT ERRELEYYLDVAEAIQQHTGLDDFNGTATIAAPLDLRNLDRFKEAGYRTTAMNIEIWDK FT GIYDAICPGKARGGGGWEHWVKALEYAVTVFGHGRVRSNIVAGIEPKRSTLAGLEYLAS FT KGVVGTFAVWCPNPGSELEGHRCPEPGWYLDLAHKLVAIWKKNGITYQHVFDSNASSDT FT LQHDIYRIEDETLPIFDTVRQLEPAE" FT CDS 182474..183346 FT /codon_start=1 FT /transl_table=11 FT /gene="nifH2" FT /locus_tag="RPA2615" FT /product="putative nitrogenase iron protein (nitrogenase FT component II) (nitrogenase reductase)" FT /function="InterPro IPR000392:IPR001687 COGs COG1348" FT /EC_number="1.18.6.1" FT /db_xref="GOA:Q6N6K0" FT /db_xref="InterPro:IPR005977" FT /db_xref="UniProtKB/TrEMBL:Q6N6K0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28056.1" FT /translation="MSSNKPKHIAIYGKGGIGKSTTTSNISAALAEAGHRVIQIGCDPK FT SDSTTILRGGEDLPTVLDSLRDSGRPTIADVSAIGFGGVLCIEAGGPVPGVGCAGRGIN FT AAVDLLHELKLFEEFKPDYVLYDVLGDVVCGGFAVPIRNGIAESAFVVTSSDFMAIFAA FT NNLFKAISKYAPSGGARLGGVIANSIQTPYASALIDDFASRTGTNVVGYVPRSLTVAQS FT ELYGQTVIEAAPTSEQADVYRQLARHIAGDHPVSIPKPLNAPALKQWAKQWGDRVFGGA FT AERRLVEVV" FT CDS 183348..184706 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2616" FT /product="possible nitrogenase iron-molybdenum cofactor FT biosynthesis protein NifE homolog" FT /function="InterPro IPR000510" FT /db_xref="GOA:Q6N6J9" FT /db_xref="InterPro:IPR000510" FT /db_xref="UniProtKB/TrEMBL:Q6N6J9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28057.1" FT /translation="MEKALQPPTRERRLNGVSAYLGDVASLIAELEAGQPASRIRTFSQ FT VASDDVSIALRVLAEVEGLGIVVHGARGCAGALVRSRPGLPWAVTNLDQRDTILGADGN FT LARTLRRLHQRHRPWGIVVVATPVVAINNDDIQAVAQELSDELGIPVVELRTDGFRSRI FT GATGYDIASAALASLVPPQHGRRRDLINLLAFERGPGLTAVVQQLAGLGLEVNLVPAGA FT GQEAFAKAAQAVLSVAVFQDEADVLRRELDRLHRVPFLHLPPPIGAAGARRFVEAVAEA FT TERPLPIRIDDRISTDLLEDRRVVIALPPSQALAVAELVVQFGGRIAGISVDWIDSLHV FT EGLKALTNAATVALHVGAGQAFELVNWLGKIEPDLLIGTPAAAATATRAGIAAVAIEGD FT DLLGTAGETRLATRIGRALAAQQIGFTAGAGTSAYRASWLKRSPDWHIKREVR" FT CDS 184703..185953 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2617" FT /product="possible vanadium nitrogenase associated protein FT vnfN (U51863)" FT /function="InterPro IPR000510 COGs COG2710" FT /db_xref="GOA:Q6N6J8" FT /db_xref="InterPro:IPR000510" FT /db_xref="UniProtKB/TrEMBL:Q6N6J8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28058.1" FT /translation="MMAAHLMRPRAGCALHGALYAATAIDGVTPLVHATPGCGVQAGLW FT QGVGGCGVSWPTSNLSEKHIVFGGASRLREQIKNTRGVVSSEITVVLTGCPAEMIGDDV FT EAMAQEARDAGDEVLDLATAGFRGSAYHGYQSFLLAAVERTVVPGPTRAGLVNILGPVP FT HQDATWLAEIEELSRLIAGVGLIPNPIFGPFGGLSSLRATAQAELSVSLSPWGGAAVRA FT LDDRFGIPWIESAGLPVGAAATGALLERIVAAAGEVDDAAARIFIDRERQREAYFIDRL FT LETLYRQGGARGFAVALPSLHVGGIVRFLNRTLGWSPAAIVVTDNPPAEHRSTLEDDLP FT VVHYSEDDDEIAALIGGSGAEILFGSSLERAVADRLAVPLIECAAPTRRLSLTSGFGGF FT RGGLTLLEAIVTASEQA" FT CDS complement(186115..187101) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2618" FT /product="putative sulfonate transport system FT substrate-binding protein" FT /function="InterPro IPR001638:IPR006311 COGs COG0715" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:Q6N6J7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28059.1" FT /translation="MSIGMSRRRLLQAGAGLGLYGLLGPGSARAAAQADLSGVTLRIAF FT YKGLHKTLLETAGLAATPYKIDWKEFNSGVQHIEGINVDALDLGSGSETSAAFGVRSKA FT RVKFIAVYREDLNNQGTFVQKDSNINRVADLKGKRVGYVRGTTSHYYLYKQLAEAGLSF FT NDIKATHLAPTDGLSAFARGDLDAWAIWGYNGQLARSKYGARTLKTGVGYLSGNFLISA FT NPSAIDDPLRHAALADFLLRLQKAYAWSNANYPTYAEAQSRDTGVPVEAILDLFNNRNQ FT DYSLIANSDAAVQSHQEVADVFTKIGVFDAPVDVKPFWERSFDQALA" FT sig_peptide complement(187009..187101) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.942 atresidue 31" FT CDS 187434..189038 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2619" FT /product="possible GMC-type oxidoreductase" FT /function="InterPro IPR000172 COGs COG2303" FT /db_xref="GOA:Q6N6J6" FT /db_xref="InterPro:IPR012132" FT /db_xref="UniProtKB/TrEMBL:Q6N6J6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28060.1" FT /translation="MTRTITTETVDFIIVGAGSSGCVLANRLSEDPATSVALLEAGPRD FT SNPWIHIPIGYAKTIRNPNINWCYETEPEPTMDGRRIFWPRGKVLGGTSSINGLVYMRG FT HPDDYDGWAAAGASGWAWSDVLPYFKRSEDQVRGADAYHGVGGPLSVADLSERNPICQA FT FIDAATAAGVPANLDFNGESQDGVGYVQLTTREGRRCSSAVAFLRPALRRANLRVETEA FT LVGRVLIEGGRAVGVEYLRGGERRVLRARSEVILCGGAVNSPQLLQLSGIGPAAHLASV FT NVEPVQDLPAVGANLQDHLQVRIVWKAAHPLTLNDIVRNPVRKLWMGARYLLSRSGPMT FT ISACQVGLFARTRTELTRPDIQYHFMMFSAESSADQLHSFSGFTANVCQLRPESRGSVL FT IAAPDPRQAPRIRANYLATETDRRAVIDGLRLARTIANEQPLADFIVEEYLPGAGATSD FT DALAAHARQKGQTLFHPAGTCAIGPVLDPQLRVHGIEGLRVADCSVMPTLVSGNTNAPA FT VMIGEKASDLVLRQRVA" FT CDS complement(189128..189454) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2620" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6J5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28061.1" FT /translation="MITAIVRYRLPADIDRAACRDHFESIAPGFQSVKGLLSKHFIWSE FT RGVAGGVYQWASQADAEAFYSGPWRDGIVRRYGMEPEIEFFTVFAKTDNEAGTVTVVEA FT AQPA" FT CDS complement(189486..189995) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2621" FT /product="conserved unknown protein" FT /function="InterPro IPR003718" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6J4" FT /db_xref="InterPro:IPR003718" FT /db_xref="UniProtKB/TrEMBL:Q6N6J4" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28062.1" FT /translation="MDALELRALQAPIKERYKTDPTTALITLKAKGAIDADGISCKVET FT GKALATAGLHPATGGSGLELCSGDMLLEALVACAGVTLKSVATAIELPLTRGDVFAEGD FT LDFRGTLGVDKDTPVGFREIRLRLEVGTDAPQDKLDLLLKLTERYCVVYQTIKNGPKVS FT VSLHRV" FT CDS complement(190024..190803) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2622" FT /product="putative sulfonate transport system, ATP-binding FT protein. Subunit of ABC transporter" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1116" FT /note="Citation: Beil et al. (1995) Eur. J. Biochem. FT 229:385-394" FT /db_xref="GOA:Q6N6J3" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N6J3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28063.1" FT /translation="MLVLDGVDKTYPNGVNALQSFSARVNLGEIVAVIGGSGCGKSTLL FT RAIAGLDRATAGTIVLDGETITAPHPKIGIIFQEPRLLPWLSVADNVGFGLERLPRSDR FT HTRVAAALARVGLADKAKAWPRELSGGQAQRVAIARALVPQPEVILLDEPFSALDAFTR FT TDLQDHLLDLWADTRPTLILVTHDVEEAVALADRVLVMRPRPGRLFEEIAVDLPRPRHR FT TSAAFEDVKHAVLHSLDRSLQRTGRRADDLLVEGAGI" FT CDS complement(190803..191645) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2623" FT /product="possible sulfonate transport system permease FT protein. Subunit of an ABC transporter" FT /function="InterPro IPR000515:IPR001589 COGs COG0600" FT /db_xref="GOA:Q6N6J2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6N6J2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28064.1" FT /translation="MTLTLDNAAPVTTAAPSAQRRAPRWRGPALGLLLPLTVAVGWEAA FT VYLGWSNGRLVPPPSRVFSTITELARTGELTRHVAATLGRVAAGFGLGVLSGTLLGAVA FT GYWSLARRLLDSTVQALRAIPSIAWVPLFILWLGIFETSKVALIAVGVFFPVYLGVMGA FT IRSVDRKIVEVGRAFRLSGPAMIRRILLPAVLPAYVLALRVGLGLGWMFVVAAEFMGAS FT EGLGFLLIDGQQLGKPAQIVAAIVIFAVLGKTTDWLIEIATLPLLRWQDAFGRHDGET" FT misc_feature complement(order(191016..191081,191145..191210, FT 191226..191276,191316..191381,191493..191558)) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(191769..192743) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2624" FT /product="putative sulfonate transport system FT substrate-binding protein" FT /function="InterPro IPR001638 COGs COG0715" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6J1" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:Q6N6J1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28065.1" FT /translation="MTTLSRRLMTSLVLATMLAPTAVIAADKPKEIRIDWATYNPVSIV FT LKQQGLLEKEFAKDGIGIVWVQSAGSNKALEFLNAGSIDFGSTAGSAALVAKINGNPIK FT SIYVYSRPEWTALVTTKDSKIASVADLKGKRVAVTRGTDPHIFLVRALLGAGLSQNDIT FT PVLLQHADGKAALIRGDVDAWAGLDPMMAQAEVEEGAKLFYRKPEANTWGILNVREDFL FT KEHPDLVRRVLAVYEDARKYSLTHYDELKQAFIGVTKLPDAVVDKQLKERTELTHSRIG FT TPQRDSILAAGLALQQAGVIQPSVDVKAVLDTLIDDQVPLPTN" FT sig_peptide complement(192666..192743) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.999 atresidue 26" FT CDS complement(193296..194504) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2625" FT /product="putative cystathionine or methionine gamma-lyase" FT /function="InterPro IPR000277 COGs COG0626" FT /EC_number="4.4.1.-" FT /db_xref="GOA:Q6N6J0" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/TrEMBL:Q6N6J0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28066.1" FT /translation="MTNAAKQWGPATWALYMGEQHRQVGDPVTPGPALSASFLTAPNAV FT GFSANDLGAAAPHFYTRWSNPTVELLEARLAALDAGEAAVTFASGMAAVAALFSDRLHA FT GDHLVLSDVCYAGVAELAHDELTRNGIAVTTVDSSKPEAIAAALRPNTRLVHIETPANP FT ILRLADIAAIAPLVHAAGAELSVDATIATPLGLRPLELGADYVVHSLTKYICGHGDTLG FT GAVIGRAEAIARLRRGSLIHLGGCLAPFSAWLILRGLETLAPRMRLHEANARAVEALLA FT NHPKVKAVYWPGSPRHPQHELAQRTMRCFSGLLSFTVNGDGPALAEQLAERMRVVSYAV FT SLGKTKSLLVYIPTEDILRSSFRLTGDAAASYRAWAGDGVFRLSVGIEDSADIIADLET FT ALG" FT CDS complement(194746..195780) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2626" FT /product="possible hydrolase" FT /function="InterPro IPR000073:IPR000379:IPR000734:IPR002410 FT COGs COG0596" FT /db_xref="GOA:Q6N6I9" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q6N6I9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28067.1" FT /translation="MSQKALIAAITSGLFTMLAVVLWPIASAKAEAEIVNDDFKIKSSA FT PGIELFVRNKRPAGTDVSRGDRTVLYVHGATLASELVFDLPVGGASWADDLARAGWDVW FT LVDVRGYGRSTWPEALRAPAESNPPVATTAEAVADFTSAADFIRAKRKIDSLQVIGWSW FT GGVISGAYAAANPDKVSSLVLVAPLWAFDKPVTAGPPKKAWQEWTLADSRARIQKGVPA FT EQAKLILPDSTVALWEKAMRDSQPEAAGRTPELFRSPTGVAADVSWQAQQPYDAAAIKA FT RTLIIRGEWDDLTPRSLQLALFGQLKNAKIRELIEIPAASHFIIVEKARDRLFDEVRNF FT LSRH" FT sig_peptide complement(195694..195780) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.559 atresidue 29" FT misc_feature complement(195700..195765) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 196163..197860 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2627" FT /product="putative carboxylesterase" FT /function="InterPro IPR000379:IPR002018:IPR006311 COGs FT COG2272" FT /EC_number="3.1.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6I8" FT /db_xref="HSSP:1B41" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6N6I8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28068.1" FT /translation="MPIQSLDPSAATMNRRRFLGHAVGAAVLTGASSTALPLVFTTPAR FT AREASPVVIETRLGRLRGESVEGVASFKGVPYGASTAGDNRFRPPVPPAAWTGERDATQ FT FGLSASQPAAASPVEFAWYWSKVPTSEDNLTLSVYTPGVNDGGKRPILVWLHGGAFSIG FT AGTSPGFDGSHLAKAQNVVVVSINHRLNLFGSLFTGEFPEELSPASGNLSVLDQIAALK FT WVRDNASAIGGDAGNVTIFGQSGGAAKVAVLLGAPAAKGLFHRAVIQSASGAWRLATPE FT SAARSAHALLAQFDLTARNAGKLREIPADKLVAAIAQVAAKTGVADFRPTLDNLVFKQH FT PFDPAASALSEDIPLLIGTTADEATFFVAGDQRNFSLGADQVRARIKKFIGLDDAATDK FT LIRAYRDILPESSPSELLIAVAGDYNYVLPTLLVADRKAAQGKAPVYAYRFDWRSPARD FT GVLGSPHTAEVPFIFGTLDAAAPLIGDSPDRLNVRDRIGEIWASFARSGRPTTKAIAEW FT NPYRGEERTAALIGGTWRTVDDHAKARRAAFADIAPYEYSRPVTFTRD" FT sig_peptide 196163..196303 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.864) with cleavage site probability FT 0.815 atresidue 47" FT misc_feature 196217..196285 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 197891..198913 FT /codon_start=1 FT /transl_table=11 FT /gene="aapJ-2" FT /locus_tag="RPA2628" FT /product="polar amino acid ABC transport substrate-binding FT protein, aapJ-2" FT /function="InterPro IPR001311:IPR001638 COGs COG0834" FT /note="Citation: Walshaw and Poole (1996) Mol. Microbiol. FT 21:1239-52" FT /db_xref="GOA:Q6N6I7" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q6N6I7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28069.1" FT /translation="MVLHLRWTTSIGAALAVVLALVSSAASAGPTLDRIKSRGVIKVGV FT GTTPGYFAPDSNGRWQGFFVDFGRALAVTVFGDPDKVQFTSSSPQQRLPALQSGEFDVL FT LSGVTVTITRAFKLGFHFGPTIFYDGQGILVRKDLGVTSASQLDGATIGIQSGTTGELN FT IADYFRKHRHKFTPVTIEDTSEFIAALDSGRVDGLTQDASDLAAKQTQLKKPSDYVILP FT ERLSKEPLAPAVAGGDDRWLEIVTWTVNATIQAEEWGITSKNVDDFLKSDDPSIRRFLG FT VDPSLAESIGLDPKWAYTIIKTVGNYGEIFDRHLKPLGWERGYNRLWTQGGLLYSPPFR FT " FT sig_peptide 197891..197977 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.954 atresidue 29" FT misc_feature 197909..197977 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 198934..200103 FT /codon_start=1 FT /transl_table=11 FT /gene="aapQ-2" FT /locus_tag="RPA2629" FT /product="polar amino acid ABC transpor permease protein, FT aapQ-2" FT /function="InterPro IPR000515 COGs COG0765" FT /note="Citation: Walshaw and Poole (1996) Mol. Microbiol. FT 21:1239-52" FT /db_xref="GOA:Q6N6I6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6N6I6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28070.1" FT /translation="MSAQERPRRRPRAWLPNWLGPRPATQLAVLVAVIVLVAIMGSNIA FT ATMARIGLTPGFGFLERAAKFEIGESTIPFRAGDSYARAIAVGVLNTAKVAVVSCILAT FT VLGVALALMRLAGHPVLSGLVRWSIEVVRNTPLLLQLFFWIALAHALPPPRRAVVWFDC FT VFLTNRGVYLPSVIIAEGSWMAITAIAAILLGWLALLWRSRTRGPLSPLPLGLVAILAL FT AVVIYASGFRISLHSPVVQGFNIQGGTSLTPEFAALLVGLTVKFAAIFAEIVRAGILSV FT RREQWDAARALGLSEFQIVRLVVLPQALRVITPLATSCYLDVIKDSSLAVAIGYPDLMN FT ITNTTANTTGQALETLLIVVALYLTLNLSVSAVMNVYNARVAMRGGRPA" FT sig_peptide 198934..199071 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.800) with cleavage site probability FT 0.657 atresidue 46" FT misc_feature order(199012..199080,199216..199284,199318..199386, FT 199465..199533,199570..199638,199696..199755, FT 199996..200064) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 200100..201182 FT /codon_start=1 FT /transl_table=11 FT /gene="aapM-2" FT /locus_tag="RPA2630" FT /product="polar amino acid ABC transport system protein, FT aapM-2" FT /function="InterPro IPR000515:IPR001005 COGs COG0765" FT /note="Citation: Walshaw and Poole (1996) Mol. Microbiol. FT 21:1239-52" FT /db_xref="GOA:Q6N6I5" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q6N6I5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28071.1" FT /translation="MNALELQETISQRRSFGWPKSVVALFGGWRRALVTFAVWALILWL FT GVPLLRWLLLDATWQGSSAECAARGGACWAFVAAKLRFFLFAFYPAEWLWRPVAVCGLL FT IALLLASAMPRLWGARLVVAWPVVIGLCLALMSGLPGGAVVSSNQWGGLPITLLVWVIC FT FATSVPIAVLLSLARRSRMRIVRWLAIGYIELMRAIPMVAILYFATLILPMALPGSVPL FT DKLPRAIVMLALFWTAYVAEVVRGGLQAVPRGQEEAALALGLGYWRSMRLIVLPQALRA FT VVPGLVNLGIGFLLATSLLAVIGIMDILGAAKAAAADPEWLGYYKEAFLVVALVYFVMC FT YSGSRYSLWLERRLGTFNGR" FT misc_feature order(200196..200264,200298..200366,200376..200429, FT 200466..200534,200562..200630,200667..200735, FT 200778..200831,200955..201023,201081..201149) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 201730..202758 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2631" FT /product="possible ABC transport substrate-binding FT periplasmic protein" FT /function="InterPro IPR006311 COGs COG0715" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q6N6I4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28072.1" FT /translation="MAQSKKVGGLSRRNLLKTTGAAGLVVSAGALAGKIYSPAVAAPAP FT KIRLAWTEVAACHSPLGFGVAKGLYAKHNVDVELFYQGASGQTLIQALATGKADVGAGL FT IGDWLKPLEQGFDVKLFVGSHGGCQRLLASPASGIKDIAGVKGKTIASYDVVSPPKVAF FT QVTLAKAGIDPENDVTWKVVPFDLVGEAVNRGDADIAAHLDPWAFSIEKKFGLTKIADT FT QTGVYEGHTCCVLGANGAFLKANKDALRRLAIANIEVHDYVADHADEAAQWYLDALKPA FT GLTHAELTEILGSFVLHNHPIGQPLVDQIQKSSEDLKLVKVLDSSTDPKAFAERVTVNL FT LA" FT sig_peptide 201730..201855 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.997) with cleavage site probability FT 0.887 atresidue 42" FT misc_feature 201787..201855 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 202769..203767 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2632" FT /product="ABC transport permease protein, possibly for FT nitrate" FT /function="InterPro IPR000515 COGs COG0600" FT /db_xref="GOA:Q6N6I3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6N6I3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28073.1" FT /translation="MTDAIQAAGDEAVVGRVGAVNGLWRDGLLAAAAWLAAALVTIGLP FT DVVPWGSASLFAWITAGVAAIFLALSVTVHRPGRAGEVLVHYGPWVIVVGIWLAVWELT FT TAKFGWLPKPFFSPPHGLLNVYVTDGSRLLICIGYTLRLWALGFLSGIVVGYGVGVALG FT WSRRFSYWGMPLLKLIGPVPATAWIPCTFYFFPTTFGASIFIVALASGIPVAILTASGV FT GSVNRAYYDVGRILGADSRYLIRRVAIPAAMPHVFVGLFMALYYSFAVLVVAEMLGAKY FT GLGWYIQFQTAYSGYANVYAALLIMALLCAGIIRLLFVVRDRLLNWQEGFI" FT misc_feature order(202829..202897,202910..202978,203015..203083, FT 203195..203263,203300..203368,203378..203446, FT 203531..203599,203657..203725) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 203767..204579 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2633" FT /product="putative ATP-binding protein of ABC transporter, FT possibly for nitrate" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1116" FT /db_xref="GOA:Q6N6I2" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N6I2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28074.1" FT /translation="MADLVLVHSASPKTIPADVGSDGMALEIRGVSHRFKLSGTSLPVL FT DTIDLDVAPGDFVALLGPSGCGKSTLLRLIAGLEPPSSGTILADGERVTAPDPSRNLVF FT QDPTLFPWANVWSNVATGLEARGVLKLQRSRVAEALALVGLDGFETAYPHQLSGGMAQR FT ASLARALVNDPSLLLLDEPLGKLDSLTRLTLQDELVRLWHKKRFTAILVTHDVEEALLL FT ASRILVFGERPARIKAQFLFDEPYPRHRDDPVLVDLRRQILSTLGVAT" FT CDS 205422..206318 FT /codon_start=1 FT /transl_table=11 FT /gene="nifB1" FT /locus_tag="RPA2634" FT /product="putative nitrogenase iron-molybdenum cofactor FT biosynthesis protein NifB" FT /function="InterPro IPR000385:IPR006638 COGs COG0535" FT /db_xref="GOA:Q6N6I1" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/TrEMBL:Q6N6I1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28075.1" FT /translation="MRMAATAPAFPELEGRHPCFSTTAEGHARAARLHLPVSPGCNIDC FT AFCIRDFNRRDQRPGVATRLLTPEQAVAIVARALELCPSINVVGIAGPGDPLATPHALQ FT TFALVRERWPELVLCLSTNGLMLPDRIDEIAGLGISTLTVTVNAVDPQIQAQVTPKIAW FT QRKRLNGVVAGERLIANQLEGIARAAAHGLTVKVNTVLIPTVNDHHIETIAERVAAAGA FT NLINIIPLIPQHGFAHLKPPGMLMRYAARTAAEKYLRVFTHCQRCRADACGIPGVSDYA FT QQLYGDDIVAEPTFSHG" FT CDS 206357..207226 FT /codon_start=1 FT /transl_table=11 FT /gene="nifH3" FT /locus_tag="RPA2635" FT /product="putative nitrogenase reductase NifH subunit" FT /function="InterPro IPR000392:IPR001687:IPR005977 COGs FT COG1348" FT /EC_number="1.18.6.1" FT /db_xref="GOA:Q6N6I0" FT /db_xref="InterPro:IPR000392" FT /db_xref="UniProtKB/TrEMBL:Q6N6I0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28076.1" FT /translation="MAKQLKQIAIYGKGGIGKSTTTSNISAALAEAGYKVMQFGADPKA FT DSTNTLRGGEYIPSVLDLLAERRRVDAYEAIFQGFGGIYCVEAGGPQPGVGCAGRGIIT FT AVELLKQQRVFEELDLDIVIYDVLGDVVCGGFAVPVREGIAEHVFTVSSSDFMAIYAAN FT NLFRGIERFSNSGGALLGGIIANSINTDFQREVIDDFAAHTDTPIVQYVPRSLTVTQAE FT LSGRTTIEAAPQSAQADVYRQLARRIAEHTESKVPTPLNPQQLREWSARWADHLVAAER FT AEAERQVA" FT CDS 207292..208800 FT /codon_start=1 FT /transl_table=11 FT /gene="NifD2" FT /locus_tag="RPA2636" FT /product="possible nitrogenase molybdenum-iron protein FT alpha chain (nitrogenase component I) (dinitrogenase)" FT /function="InterPro IPR000510 COGs COG2710" FT /EC_number="1.18.6.1" FT /db_xref="GOA:Q6N6H9" FT /db_xref="InterPro:IPR000510" FT /db_xref="UniProtKB/TrEMBL:Q6N6H9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28077.1" FT /translation="MVLNLKTSSVETREQRLGTIIGWDGTASKLADESAFSRGDCGGCG FT TKARRVCELEGPFTQGSVCSEQMVECQAGNIRDAVLIQHSPIGCGAGQVIYNSIYRNGL FT AMRGLPVQNIRFISTNLRERDMVYGGAEKLAEAIRLAVERHQPKAVFIATSCASGIIGD FT DIESVARTAEAEFGIPIIPLHCEGFKSKHWSTGFDATQHGILRQIVRRNPDKRQDDLIN FT VINLWGTDVFSPMLGELGLRVNYVVDMATVEELAQMSEARATVSFCYTLGTYLATALEQ FT EFGVEQIKAPQPYGFAGTDAWLRELARVTGREAQAEDYIAREHARVKPLLDELRPKLKG FT LKGYVATGSAYSHGLIGVLREIGVEVDGSLVFHHDPVYDSEDPRQDSLGHLIENYGDVR FT HFTVGNRQQYQFYNLLQRVKPDFIIIRHNGLAPLAARLGIPAIPLGDEHHALGYQGMVN FT LGESILAALQHRKFHKDIAKRVSLPYKQSWLAQKDPFALARAAS" FT CDS 208812..210194 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2637" FT /product="possible nitrogenase iron-molybdenum protein FT subunit nifK homolog" FT /function="InterPro IPR000510 COGs COG2710" FT /db_xref="GOA:Q6N6H8" FT /db_xref="InterPro:IPR000510" FT /db_xref="UniProtKB/TrEMBL:Q6N6H8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28078.1" FT /translation="MAILALKSRPTEITPDADKSGAIELVRYVCAIGAMQTAAAIPRVV FT PITHCGPGCADKQYMNLTFYNGFQGSGYGGGPVVPSTNASQREVIFGGADRLRELIESS FT QLVLDADLFVVLTGCIPDLVGDDVGSVVRDFQKRGVPIVYAETGGFRGNNFTGHEAVTH FT AIIEQYLGPWDGVREQGTVNLWSLLPYQNTFWRGDLEEIKRLLEGIGLKVNVLFGPDSE FT GLSEWRNIPRAQFNLVLSPWLGLSTAELLARRYEQPYLHIPVVPIGARESGAFLRKVAA FT FAGIPADVVEAFIAKEEKRYYNYIDGFTDFYSEYWWGLPARFAVIGDSAYNLALTKFLV FT TQLGLIPAKQIVTEDPPVEHREAIQAEFRAIDEDVSVDVEFVEDSYTIHQALRNADFGH FT KPPIIFGTTWERDLVKEMKGSLIEVGFPASYEVVLSRSYVGYRGALALLERIYSTVVSH FT SA" FT CDS 210489..211793 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2638" FT /product="possible oxidoreductase" FT /function="InterPro IPR000205:IPR006076 COGs COG0665" FT /db_xref="GOA:Q6N6H7" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:Q6N6H7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28079.1" FT /translation="MTTTDVSWPKSLWHAVTGPGPGLPALHGAEEADVVVVGGGFSGLS FT TALHLREAGVDVAVVEAAEPGWGASGRNNGQVIPTLSRPDPEDIVAKHGAAGERLVGLI FT RDSASILFDVAKRHGVDAEQEQNGWVQPVHSPGRIKIAERRFRQWSKFGAPVELLSRDQ FT VRDMLGSEAWFGGFWNRTGGHVNPLALARGLARAVLAQGGRIFARSPAVSIERRGDRWI FT VKTAQGEISGRALVVASNAYTGEFSKTLAPAIASEVMPVRSWQMATQPLSDNVRKTIIP FT GRQAMSDTHGELIFGRFDARNRFVTGGAIIRPFNQIATLKARVGKRLQRLWPQIGEVRF FT DYVWNGFIGMTTDYLPHIHRLGPNAYGWTGCNGRGVALSVALGRELSKAVRGVTDGELA FT LPFTEPTPIPANELLRPFAPLMMVLYRHRDAKEIG" FT CDS complement(211841..212326) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2639" FT /product="probable L-2-amino-thiazoline-4-carboxylic acid FT hydrolase" FT /db_xref="GOA:Q6N6H6" FT /db_xref="UniProtKB/TrEMBL:Q6N6H6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28080.1" FT /translation="MSADQELGILARRRIEAGVIKPIYETLCAHLGKEQAQSLIGEAIA FT KTAVEAGRDFAARVPGGADIRSFAELQKLWTQDDALEVEVLRADDGGFSYDVHRCRYAE FT MYREMGLAEIGHLLSCNRDHGFIEGYDPRVELTRTRTLMSGGACCDFRYEVKADAKT" FT CDS complement(212323..213045) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2640" FT /product="Isochorismatase hydrolase family" FT /function="InterPro IPR000868 COGs COG1335" FT /db_xref="GOA:Q6N6H5" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:Q6N6H5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28081.1" FT /translation="MSNVPLKLNSTPYPFPLHGPLTTHNTALLVIDVQGDFCAEGGYMH FT QFGFDLTALQRPIPVIARVLAACRAVGMPVIHTRETFKPDLSDVQPHRLWRGIDGKGVA FT VGDEGPKGRYLIEGAECWQIIPELAPQDGEPVFDKPSYGAFGFTGIEKYLRERGITNLI FT LTGLTTDCCIHTNVREALDRGFDCLTLADGTGACFEAVHEAAIQLLIKKSGVFGAVAES FT PALLEALKRLPVAEVASS" FT CDS complement(213042..214643) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2641" FT /product="putative ABC transporter oligopeptide-binding FT protein" FT /function="InterPro IPR000914:IPR006311 COGs COG0747" FT /db_xref="GOA:Q6N6H4" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6N6H4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28082.1" FT /translation="MKMQHLSRRAFLSSVAFAALAITQPRIVHAQDTPLREGVLNVHMN FT AEQRVLNPAIRASVDVYLVGSKIVEPLVDLDDKGQPVGVLATAWKTSADGKTITFNLRE FT NVKWHDGKPFTSADVQYTAMELWKKYLNYGSTLQKSLQAVDTPDPLTAVFQYSEPMPLD FT LLLRALPDLGYIAPKHIYDGTNILENPANIEPIGTGPFKFVKYERGQYIIAERNPDYWR FT KGFPYLDRIVWKFIPDKTAAAMALETGSVDLSAYTSLTLSDINRLREHKDFIVSTKGNE FT GNAVQNTVEFNFRRKELSDIRVRRAIIHAINTDFFIENLLYGFGKRGQGPIPQSSDFFV FT AGAPDLKYDVALANKLLDEAGYPRTNGQRFKLRLLPAPWGEDVSSFATFIQQSLTEVGI FT QVEIVPRDAAGFLSDVYRDWNFDLATGRHQYRSDPAVSTTVWYRSGATKGAPWTNQWGW FT QDAEIDRVIDKAAIELDPQARKRLYAEFVKLANTEVPVWMATDREFITVTNKKLRNDRN FT TPRWPSSSWYDLWVQK" FT sig_peptide complement(214551..214643) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.988 atresidue 31" FT CDS 214868..215758 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2642" FT /product="transcriptional regulator, LysR family" FT /function="InterPro IPR000847:IPR005119 COGs COG0583" FT /db_xref="GOA:Q6N6H3" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6N6H3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28083.1" FT /translation="MIERDEPPLTSVRAFEAVARLGGATAAARELGVSPSAISHQLAVL FT DDFMGQPLTRRQGRGLVLTDAGREYFRSVRSAFAVLRGATDQLREGSRSTQVRLGVIPL FT FARAWLFRHIHEFLDRNPDIDLNISYTHHRNYVSDSADLSVRFGEGSWKGYKAHRILSG FT AIAPYCSRAFLARHREAATDPKLLQNYALIHDQDFGGWQQWWDLHNVEGEPSTGLLVED FT GNLALQAALDGLGIALLRPSLVDVFVDEGGLSRLFDHQLEDGRDYYLCHLVEQPLSEAE FT ERLVSWLIDRCRHSS" FT CDS complement(215819..217441) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2643" FT /product="putative ABC transporter ATP-binding protein" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1123" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6H2" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N6H2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28084.1" FT /translation="MTAPAVLTLDKLSVRLPAGADRSHAVRDASLMIAAGEILCVVGES FT GSGKSIMANAVMQLLPGGVTLDGGRVLFEGRDLAQASAAEMRKVRGAGIAMVFQEPMTA FT LNPLRTIGDQIGEMFSIHTDLSKRDIRSKVLALLTDVRIPDPARAAGAYPHELSGGQRQ FT RAMIAMALALDPKLLIADEPTTALDVTTQAQILTLIRELQSRRNTAVLFITHDFGVVAE FT IADRVVVMQHGVIVEQGQADDVLNRPQHAYTRQLIAAVPPLTAPPPRPFGSDTILSIDN FT VSKTFRTGGFLGRGARVTDAVKNVSLKLPKGATLGIVGESGSGKSTLARCIIRLLDPDA FT GSILLDGRDWATMPREQVRRETRHMQMVFQDPFASLNPRHKAEELVAQGPIIHGTPRKQ FT AIAEARKLFELVGLDPAAGDRLPHEFSGGQRQRIGLARALALKPDVLIADEAVSALDVS FT VQAQVLKLLTDLREQLGLSIIFITHDLRVAAQICDLVAVMKDGAVVEHGPAGDVFNAPQ FT HPYTQALLASIPGGDFARCHALT" FT CDS complement(217438..218268) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2644" FT /product="putative ABC transporter permease protein" FT /function="InterPro IPR000515 COGs COG1173" FT /db_xref="GOA:Q6N6H1" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6N6H1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28085.1" FT /translation="MDTLKRYFRSPAAIVGLILLLLIIGMAISAGWIYPRDPLALAGRP FT LIWPFSNPRFLLGTDNSGRDIAAQIFHGARIALLIGGAATVIAILIGVLIGAFAGYFGG FT WVDTVLMRITEAFQTLPNFVLLLVLVAVFGSTLTTVTIAVGIVSWPAPARLTRAEFLSL FT RNREFVQAGRTLGMKDLQLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPN FT VASWGNLIGLGRDVLRVQWYVAAIPGIAILITVLAVSLVGQGLNDALNPRLKGR" FT misc_feature complement(order(217486..217551,217615..217680, FT 217834..217899,217963..218028,218167..218232)) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(218179..218268) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.850 atresidue 30" FT CDS complement(218273..219250) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2645" FT /product="putative ABC transporter permease protein" FT /function="InterPro IPR000515 COGs COG0601" FT /db_xref="GOA:Q6N6H0" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6N6H0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28086.1" FT /translation="MRILNLAGRRLAASIPTLFLILIGIFLLLQFAPGDTVDAMMAQMG FT GGDAATARELRQFYGLDLSIPMQLGHYLWRLVRFDLGFSSIYGKPVASVILERLPPTLL FT LMTAALSFAFFAGLVLGVVAARGVNKWPDTLISTLGLIFYATPSFWFGLMAIVVFSVYL FT QWLPAGGFEDIGQAATGLARTLDIAAHLVLPALTLGLIFLAIYLRIMRASMLEVLNLDF FT VRTARAKGLDETRVVVRHVLRNALLPMVTLIGLQAGTMLGGSVVVESVFSLPGLGRLAY FT ESVVQRDLNTLLGIVFVSALLVIAVNFLVDLLYARLDPRISAGA" FT misc_feature complement(order(218309..218374,218450..218515, FT 218624..218689,218762..218827,218867..218932, FT 219149..219214)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(219146..219250) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.879) with cleavage site probability FT 0.360 atresidue 35" FT CDS complement(219275..220891) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2646" FT /product="putative ABC transporter oligopeptide-binding FT protein" FT /function="InterPro IPR000914 COGs COG0747" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6G9" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q6N6G9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28087.1" FT /translation="MPLSRIEISRRTALLTSAAIAANVINPMRAFAQETPRKGGAFNVH FT YGAEQRQLNPSLQASTGVYIIGGKIQEPLVDLDTAGNPVGVLAESWESTPDGKTITFKL FT RKGVTWHDGKPFTSEDVAFTAMNMWKKILNYGSTLQLFLTTVDTPDPQTAIFRYERPMP FT LNLLLRALPDLGYVSAKHIYENGDIRQNPANLAPIGTGPFKFNKYERGQYIIADRNDNY FT WRPNAPYLDRIVWKVITDRAAAAAQLEAGGLQLSPFSGLTISDMARLGKDKRFIVSTKG FT NEGNARTNTIEFNFRRKELSDIRVRRAIAHAINVPFFIENFLGDFAKLGTGPIPSTSTD FT FYPGPNTPQYPYDKQKAIALLDEAGLKPGAGGNRLSLRLLPAPWGEDISLWATFIQQSL FT GEVGIQVEVVRNDGGGFLKQVYDEHAFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWT FT NQWGWEDPAIDKIIDDAATEVDPAKRKALYADFVTRANTELPIWMPIEQLFVTVITAKA FT RNHSNTPRWASSTWHDLWLAE" FT sig_peptide complement(220793..220891) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.998 atresidue 33" FT CDS complement(221061..222227) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2647" FT /product="putative hydrolase" FT /function="InterPro IPR002933 COGs COG1473" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6G8" FT /db_xref="InterPro:IPR017439" FT /db_xref="UniProtKB/TrEMBL:Q6N6G8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28088.1" FT /translation="MTIDPRITTIADEAIVWRRDIHARPEIMYDLDRTSALVADLLRQF FT GCDEVVTGLGRTGVVGLVHGRGRSANRAIGLRADMDALPIEEDTGVAYASQTPGRMHAC FT GHDGHTAMLLGAAKHLAATRDFNGSVAFIFQPAEEGGAGAKAMIEDGLFSRFPIDEVYG FT MHNKPGLPIGQFATRAGAVMASTDRVEIEIEGIGGHAARPQHSIDPVVVGAQIVTALQT FT IVSRTLDPLASAVVSITNFHAGSAFNVIPQKATLVGTARALDGKVRDRLEARIAELSTL FT IAQAHGATARVTYERGYPVTCNHAEQTAFAADTAVAITGNDQVDRDLAPMMGAEDFSYM FT LEQRPGALIFLGNGDSAGLHHPRYDFADAAIPYGIAYWSKLVERALPL" FT CDS complement(222257..223039) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2648" FT /product="unknown protein" FT /function="InterPro IPR001424 COGs COG0346" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6G7" FT /db_xref="InterPro:IPR018152" FT /db_xref="UniProtKB/TrEMBL:Q6N6G7" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28089.1" FT /translation="MGFQIDHVVVAVANLDQAIVDYRRLGFTVEAGGEHPGRGSRNALV FT VFDDGSYFELIAFDRPAPDFRWWQVLDRSGPGLVDYALLPRNIDADVAAAQSRGLDFEN FT PEDGGRERPDGERLIWKTARSKQSDTPFFCGDVTPRALRVPEGAVRQHPNGALGIGSVV FT VAVKDIDRSVGRYAALFGEPAAHVHALPGLGVRIAHLPADRSAITLITPTAEGPAGQRV FT AAHLKSRGESPFAIGLKGAPPTTLDIKLSHGAPLEFIG" FT CDS 224018..224374 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2649" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6G6" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28090.1" FT /translation="MCAATCGVRSTLVELARRSFDESRQRLKSAQPAEKTAMSQPPRRP FT RTLNDARTEAEAAFKKVTAKPVEAPPKRQALPGVKEMVSLRIDQAVLEHFQEGGPGWQD FT RINAALRKAAGLDG" FT CDS complement(224371..225240) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2650" FT /product="Permeases of the drug/metabolite transporter FT (DMT) superfamily" FT /function="InterPro IPR000620 COGs COG0697" FT /db_xref="GOA:Q6N6G5" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q6N6G5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28091.1" FT /translation="MKAALWMAGWLALMVIVAVAGRETLRELSVFQVMELRSVIGFAML FT YPLIHKFGGLTAMATARPLAHLSRNLVHYAAQLGWFYALTLISIGQVVSIEFTMPIWIA FT ILAATFLGEHMNVWKITAVVLGLIGVVVIVRPATSSIEPGQLIALGAAVGFGISVTLMK FT SLTRTESTLAIIFWMLLIQSAAGLVPALWLWQWPSAYVWVWIVIIAFCGTFSHYCMARA FT LTYADATIVVPMDFLRVPLSATAGWLIYGERLDAYTVIGAALILIGNLLNLRGAPRPPA FT AASIRNSP" FT misc_feature complement(order(224581..224646,224659..224724, FT 224746..224811,224827..224892,224932..224997, FT 225058..225123,225163..225228)) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(225178..225240) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.937) with cleavage site probability FT 0.642 atresidue 21" FT CDS 225450..225851 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2651" FT /product="Endoribonuclease, protein synthesis inhibitor" FT /function="InterPro IPR000408:IPR006175 COGs COG0251" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR006175" FT /db_xref="UniProtKB/TrEMBL:Q6N6G4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28092.1" FT /translation="MRVLQPDGWAKPRGFSHGVAFNGPGQWLVLAGQTGTNDQGEYESD FT DLAAQVGAALRRVTRLLAEAGAGPEHIVRLTWYLTSRAEYEAAGAGIGAAWKETLGRHF FT PPSTLLYIGGLVDPRAKVELEVTAFVPAR" FT CDS 225942..226145 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2652" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6G3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28093.1" FT /translation="MTQRSTSADFVTAFATGWPEAQPEVMILSLTTQKGVQDFALTKEQ FT ALLVAKTIKRTATALAAPKARA" FT terminator complement(226205..226226) FT /note="TransTerm prediction, 98+%" FT CDS complement(226259..226438) FT /codon_start=1 FT /transl_table=11 FT /gene="pucAa" FT /locus_tag="RPA2653" FT /product="light harvesting protein B-800-850, alpha chain A FT (antenna pigment protein, alpha chain A) (LH II-A alpha)" FT /function="InterPro IPR000066:IPR002361" FT /note="Citation: Tadros and Waterkamp (1989) EMBO J. FT 8:1303-1308" FT /db_xref="GOA:P35101" FT /db_xref="HSSP:1NKZ" FT /db_xref="InterPro:IPR018332" FT /db_xref="UniProtKB/Swiss-Prot:P35101" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28094.1" FT /translation="MNQARIWTVVKPTVGLPLLLGSVTVIAILVHFAVLSHTTWFSKYW FT NGKAAAIESSVNVG" FT sig_peptide complement(226328..226438) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.672) with cleavage site probability FT 0.501 atresidue 37" FT misc_feature complement(226334..226399) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(226464..226607) FT /codon_start=1 FT /transl_table=11 FT /gene="pucBa" FT /locus_tag="RPA2654" FT /product="light harvesting protein B-800-850, beta chain A FT (antenna pigment protein, beta chain A) (LH II-A beta)" FT /function="InterPro IPR000066:IPR002362" FT /db_xref="GOA:P35106" FT /db_xref="HSSP:1NKZ" FT /db_xref="InterPro:IPR002362" FT /db_xref="UniProtKB/Swiss-Prot:P35106" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28095.1" FT /translation="MADKTLTGLTVEESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPW FT LH" FT misc_feature complement(226470..226526) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT tRNA complement(226967..227042) FT /gene="tRNA-Lys2" FT /locus_tag="RNA_29" FT /product="tRNA_Lys" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(227198..230032) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2655" FT /product="beta-(1-3)-glucosyl transferase" FT /function="InterPro IPR001173 COGs COG1215" FT /note="Citation: Bhagwat and Keister (1995) Mol. Plant FT Microbe Interact. 8:366-370" FT /db_xref="GOA:Q6N6G2" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q6N6G2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28096.1" FT /translation="MRAVVAVLLFVTAAHAGLWGLLREKQQAAEFTGILPSVSYAPFDG FT SGHPDVDNFPTAERIRSDLKKLSAQTRAIRLYSSTGGPEMVPPIANEFGLKVNVGAWID FT KDVTRNEREIQAAIDLAKHNANVSGIVVGNETVYRGDQIPLENLGLSEEERYRLVAEEN FT QRVRDAEAQPADKRDEAVRWATAENNVRRLTRLIQRVKSQVKAPVTSGEIWNIWLEHPE FT LASSVDFIAAHVLPYWEGFSAKQAVDQAMIIYQKLREAFPGKRIVIAEFGWPSAGYNRK FT AAVPGQFEQAVTLRNFVSRADSIGMEYNIVEAIDQPWKFFEGGVGPYWGFLDASRQPKF FT AWTGPVVDPNYWKLAGIALLVGILLSLPILQLAAPTAMQTLLLSAAAHGAGAWAATVFA FT YWNGHYFLFGSAFALTLGMILLIPLVAIALARIEEISAVAFGRKPRRLITRALTDAQET FT KRAAAIASGEPVNVPKVSIHVPAYFEPPEMLKQTLDALARLDYPNFEVVVIINNTPDPA FT FTQPIQDHCRELGERFKFINAEKVKGFKAGALRIAMERTAVDAEIIGIIDADYVVTPDW FT LKDLVPAFDDPRVGLVQAPQEHRDGDRSLMHYIMNGEYAGFFDIGMVQRNEYNGIIVHG FT TMCLIRRAAMDMAGGWSSDTICEDSDLGLEIMEHGWLTHYTNTRYGYGLLPDTYEAFKK FT QRHRWAYGGFQIIKKHWRRFLPGNSRLSRDQRREFGLGWLNWLGAESLGVVVAILNLIW FT VPIVAFADIAIPDKILTLPIIASFIVTLAHFLVLYRLRVKIGVPQMLGAMIAAMSVQWT FT VSRAVAQGLITEHLAFARTSKGGLTMMSVEFQAFWEAVIGVLLLIGAGILVVSNSNIQI FT TEIYIFAGVLVLQSLPFLAAVAIAILENSRINQFGWWTATAVRTAELIGLRPVALPTPI FT PAPQKVASELHRDA" FT misc_feature complement(order(227345..227410,227432..227497, FT 227594..227650,227672..227728,227774..227839, FT 228746..228811,228824..228889,228911..228976)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(229982..230032) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.976) with cleavage site probability FT 0.969 atresidue 17" FT CDS complement(230220..230798) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2656" FT /product="hypothetical protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N6G1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28097.1" FT /translation="MRRVFLEFQNAMLRCLAVSGLALSIGVGGAIAQSGDLRAQDQTQK FT PPAAANNQPAQSTADALKESQKKTDEFAEAAQAINGPAGNPECVWLGRRVVVLMWRDDL FT DTAFRHLDMYDRFGCPTGHIQAAFRCVVRSGPIDPKAPDSLSGRVHACWINPTAQQQPA FT AAAATPPGPAAKPAQAPAPQQPAAPAPAK" FT misc_feature complement(230694..230759) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(230700..230798) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.907 atresidue 33" FT CDS 231061..232695 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2657" FT /product="putative beta (1-6) glucans synthase" FT /note="observed by proteomics" FT /note="Citation: Bhagwat et al. (1996) J. Bact. FT 178:4635-4642" FT /db_xref="InterPro:IPR000490" FT /db_xref="UniProtKB/TrEMBL:Q6N6G0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28098.1" FT /translation="MQRTESKSLRTPLLLIPISLAMIFGVWWWIATPITLERAPIEANS FT KLECVSYAPFRGAQTPLDPTTHIDAEQIAQDMAQLAKISKCVRTYSIDNGLDQLPPLAA FT KVGLKVLQGIWLSNDRSKNLAQIATAVGLTKAYPDVITGLVVGNEVLLRGEMTTADLAA FT TIRLVKAQAKVPVTYADVWEYWLRNREIYDAVDFVTIHILPYWEDMPVRARYAANHVDA FT IRKQVAVAFPGKEILIGETGWPSAGRMREGALPSRANQARVVSEILALAKAENFRVNLI FT EAYDQPWKRDLEGTVGGYWGLIDADNRAEKYPAGVPISNFPYWKLDAAAGMTLSVLVFL FT TAILTLRRRPWAPRLISWLAVGTSATVAGILLGIAVDKLLVESYGVGRWAQWSLLLASG FT ILTPILGAHALMSGRPLPTFLDLFGPREDRSHSFATWALGLAVAVTVLIGAQTALGFTF FT DPRYRDFPFASLTMAVVPLFLLVLLNRPQQGLRPIAEASFAGLFALCALYTVFNEGPKN FT WQSLWTCAVYAMLALTLWRARVAQTPK" FT misc_feature order(231094..231153,232042..232101,232120..232188, FT 232231..232299,232357..232425,232453..232506, FT 232525..232593,232621..232680) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(233109..234500) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2658" FT /product="hypothetical protein" FT /function="InterPro IPR000104:IPR000694 COGs COG0840" FT /db_xref="InterPro:IPR007730" FT /db_xref="UniProtKB/TrEMBL:Q6N6F9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28099.1" FT /translation="MARKTDDLADSFATEETGGWLTRLLADEEELNTQDKWRLGSWAIA FT SLGAVVLAIMAVQNVTDRRREQTAAADVAQQSQMIQRLAKDTQTATSRLTAAIESLNTD FT RDRLYARVGTLEQGLDSVTGSIARVQSGSSKPNAPAADNPIDRWGAAATLPEFPTKETP FT PPAPPVAPVESKPNSPAAPSKKLGAIEPSPTAAAPAASPAVAATIPVTLAPTKPEEPAS FT AQAPAAAEAKKPSDDKAVAEKPQERSRLDKPRLEPAPPERPAAQTTAAMISTTPLMPSR FT SILAPPDPGAAKLLEPKAATSPEETGEDAEAAAETPAPRTDFGVDLGAANTVEGLRGLW FT RKLSKTQKALKGLQPIIMIKENGNATQLRLIAGPIADAAAAAKVCAALGSADRACEASV FT YDGQRLPMAAPASAPQAAPQRPVRRHRERVTLQQPEPPPPPPAPAQDAPPPPRPATLSS FT ILGIR" FT misc_feature complement(234318..234383) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 234668..236026 FT /codon_start=1 FT /transl_table=11 FT /gene="glmU" FT /locus_tag="RPA2659" FT /product="UDP-N-acetylglucosamine pyrophosphorylase" FT /function="InterPro IPR001451:IPR005835 COGs COG1207" FT /EC_number="2.7.7.23" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6F8" FT /db_xref="InterPro:IPR005882" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6F8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28100.1" FT /translation="MTARNSLTIVLAAGEGTRMRSSLPKVLNPVAGRSLLAHVLSAAPH FT GERDRLAVVIGPDHQAVGDEAKRVRSDAAIHIQAQRLGTAHAVLAAREAIAQGADDLLI FT AFGDTPLISAETFARLREPLHDGSSLVVLGFRAADPTGYGRLVVQDGKLTAIREQADAS FT ADELKITLCNAGVMAIDGKIALDVLDKIGNANAKGEYYLTDAVGIVRDLGLTASVIETS FT EDEVRGINTKAQLAEAETVMQTRLRLAAMAAGVTLIAPETVYLAADTTFGKDVVIEPFV FT VIGPGVSIADGAVIHSFSHLTEAKIGSKAQVGPYARLRPGTSLGDGAKIGNFVETKAAQ FT IDAGAKVNHLTYIGDAHIGASANIGAGTITCNYDGFDKHKTEIGAGAFIGSNSSLVAPV FT KIGTGAYVGSGSVITKDVPDGALAVERNVQTAKDGWAKRFRDAKSRHRKPKAH" FT CDS 236152..237978 FT /codon_start=1 FT /transl_table=11 FT /gene="glmS" FT /locus_tag="RPA2660" FT /product="glucosamine-fructose-6-phosphate FT aminotransferase" FT /function="InterPro IPR000583:IPR001347:IPR005855 COGs FT COG0449" FT /EC_number="2.6.1.16" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6F7" FT /db_xref="HSSP:1JXA" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/TrEMBL:Q6N6F7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28101.1" FT /translation="MCGIIGILGRGPVAEQLVDSLKRLEYRGYDSAGVATLEDGELVRR FT RAEGKLKNLEAVLKRQPLAGHVGIGHTRWATHGKPNEANAHPHAASGVAVVHNGIIENF FT RELRDELEGGGATFASETDTEVVAHLVNSFLVKGLSPQDAVKAALPRLRGAFALAFVFK FT GYDDLMIGARKGSPLAIGYGDGEMYLGSDAIALAPLTDDISYLDDGDWVVLTHTTAEVR FT DAKGDVVKRDVMKSGASSFVVDKANYRHFMAKEIHEQPEVVGHTLARYLDMASERIALP FT MKLPFDFKDVQHLSITACGTANYAGYVAKYWFEQFARLPVEIDIASEFRYREAPLRSGD FT LAIFISQSGETADTLAALRYAKEQGLHTLSVVNVPTSTIARESEVVMPTLAGPEIGVAS FT TKAFTCQLTALAALAIAAGRARGTLTDADEAKLVHGLIELPRLMAAALTHEPQIERLAR FT DISKAQDVLYLGRGTSYPLALEGALKLKEISYIHAEGYAAGELKHGPIALIDEKMPVVV FT IAPYDRVFEKTVSNMQEVAARGGRIILMTDAKGAEEATVDSMVTIMMPDMPAAFTPMVY FT AIPVQLLAYHTAVVMGTDVDQPRNLAKSVTVE" FT CDS 238237..239040 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2661" FT /product="DUF502" FT /function="COGs COG2928" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR007462" FT /db_xref="UniProtKB/TrEMBL:Q6N6F6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28102.1" FT /translation="MTEQLPTPTGDLPPDPPRGVMGRIRNYFLTGLIVAGPVAITFYLT FT WWFVNWVDGFVRPLVPPDYRPETYLPFAVPGSGLVVAFVALTLLGFLTANLIGRSLVDL FT GERLLGRMPVVRAIYRGLKQVFETLFSGNGNSLRKVGLVEFPSPGMWSIVLISLPPNQE FT VATKIPSQDEHISVFLPCAPNPTTGFFFYVPKNKVIPVDMSAEEAATLIMSAGVVQPGS FT DPQKKIAALAATALAAKKVREPGEPESAFSRRRAKPAEKASDKVE" FT misc_feature order(238315..238383,238441..238509) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(239071..241173) FT /codon_start=1 FT /transl_table=11 FT /gene="recG" FT /locus_tag="RPA2662" FT /product="ATP-dependent DNA helicase" FT /function="InterPro IPR001410:IPR001650:IPR001687:IPR002016 FT COGs COG1200" FT /EC_number="3.6.1.-" FT /db_xref="GOA:Q6N6F5" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:Q6N6F5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28103.1" FT /translation="MRPALLNPLFAPVTSLTGVGPKQDKLFRYLLDRDDTPRLADLLLH FT LPTSVIDRRARPKIRDAVPGTVVTLEVTVDRHRAPPPGRSRAPYLVHASDDTGDVVLTF FT FRAKPDFVQKLLPVGAKRYISGTGQLYDGTLQIVHPDRVVDEEGFAKLPQIDSVYPLTE FT GLAIGSLRRAVAQALTKLPALPEWISPEVLRRCRFPSFADALKHVHIPDQPTDILPDGP FT YWSRLAYDELLAGQLALALVRAQLRRPAGSRNAGDGRLRHKIIDALPYALTNSQQQAAA FT AIAEDLRQPVRMLRLLQGDVGSGKTVVALLAAAAVAEAGKQAALMAPTEILARQHIKTI FT APLAERAGMQVAILTGREKGKERREILERLAAGEIDFLVGTHALIQDDVIYKSLALAVV FT DEQHRFGVRERLALTSKGADVDVLVLSATPIPRTLVLTYFGDMDVSELREKPAGRQPID FT TRTLSDTRLPEVIDGIGRAIAAGKRVYWICPLVEESENVKLTDAEQRFESLRQRFGDHQ FT VGLVHGRMRGSDKDLVMGQFARGEISVLVATTVVEVGVDVPEASIMVIENAERFGLAQL FT HQLRGRIGRGSEASTCLLLYREPLGELSGARLRVIRDTTDGFRIAEEDLKLRGEGDVLG FT TRQSGLPGYRIARSEVHAQLITQARDEALRILKDNPKLEGPSGEALRCLLYLYERDEAI FT PLLGAG" FT CDS 241614..245132 FT /codon_start=1 FT /transl_table=11 FT /gene="Mfd" FT /locus_tag="RPA2663" FT /product="transcription repair coupling factor" FT /function="InterPro FT IPR001410:IPR001650:IPR001687:IPR002016:IPR004576:IPR005118 FT COGs COG1197" FT /db_xref="GOA:Q6N6F4" FT /db_xref="InterPro:IPR019793" FT /db_xref="UniProtKB/TrEMBL:Q6N6F4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28104.1" FT /translation="MKTPSRSPAEQLTPGKALTFANVAEGAEGLIIADLARAVAAKPKA FT PAVSLTVICRDGPRMQQLARSLEFFAPDLEVLQFPAWDCQPYDRVSPHAGILAQRVTTL FT AKLSRLTGSDKPLIVLTTVNAAVQRVPVREIIAAQALSVAPGNVVPMDSIVAWLEHNGY FT SRASTVREAGEYAVRGGILDLFPAGLDQPVRFDFFGDQLESIRTFDAETQRTLHTMRGL FT DLVPVSEFQLVTETIRRFRMGYVAAFGAPHPDDQLYAAVSEGRRHPGMEHWLPLFQERM FT DTLFDYLKGTPVAIEPQSEDAARERFKQIADYYDARREAMEQPGSGAIYKPLPPDRLYL FT TDSEWTARLEGVALARLTPFALPDDTSDVIDAGARAGRNFAPERADSNVNVFETLVAHV FT YALQAARKKVVIALWSEGSRDRMASMLKDHKLVALTSVNSWRTVQATPRNETMLAVVGL FT ESGFETDAFAVITEQDVLGDRLVRQRKASKKLDNFISEVTSLSTGDIVVHVEHGIGRFV FT GLQTLEVGGAPHDCVELHYANDTKLFLPVENIELLSRYGSDGTSVELDKLGGSGWQARK FT AKLKNRIRQIAGELIKVAAERHLREAPKLPIQPQLYDEFCARFPYDETEDQLAAINAAL FT GDLEKGTPMDRLVCGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHAKTFTER FT FRGFPVNVGQASRLVSAKELSQVKKGIADGTTDIVVGTHALLGKSIKFKDLGLVIVDEE FT QHFGVTHKEKLKQLRSEVHVLTLSATPIPRTLQLAMTGVRDLSIIASPPVDRLAVRTFV FT APHDPLMIREALLRERYRGGQAFYVVPRIDDLAEVKDFLDKHVPEMKVAVAHGQMPPAV FT IEDIMSAFYDGKFDILLSTTIVESGLDIPNANTLIVHRADMFGLAQLYQLRGRVGRSKL FT RAYALFTLPQHNITAQAERRLKVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQSGHIK FT EVGFELYQQMLEEAITNLKAGIVDEPVADRWSPQITIGMPVLIPDDFVADLSVRLSLYR FT RLADLDTDEEIDNFAAELRDRFGPLPDEVRYLFKIAAIKAYCRRANVEKVDAGPKGVVI FT TFRDNAFAQPDKLVFFIKRHGDAAKVRPDMKVVFFQVWETPEERLMGTTDILKQLADLA FT ENRKAA" FT CDS complement(245275..246507) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2664" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6F3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28105.1" FT /translation="MSYHAPILVVTDDESSPTLAALTDAQLFPVLASSWPEAGEAVGRL FT RPSAVVADGGAPARSLEAIARQIGLLQPYVPLIAIGTDGGLPDNVMPFSADPGELIHLA FT PRLRAALRVRTLHATAMRRLTDPSGLTELSDHDPLQDATVLLIGRGAAYPALSVALGER FT VGVVGALSIEAAAKHLNARDLDGIVLAEGFSPRVVDAFLTVLSEDTRFRHLPIVVGVPA FT PHSSFELPNLEFVDGDPAQIVGAALPLVRQHAFEARLTRTLASLDAGGLLDPRTGLLTE FT AAFERDFATAVYQAQTRGEGLSVARFVLHRADRRAVNDAARIISRLMRKMDFGTLQTDG FT TLLVVFAATDLRNAQAIARRLSSVIKQTAHSARREARIDPDVSVATLMPDESARAILTR FT VVQQDRRRVAS" FT CDS complement(246556..248091) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2665" FT /product="possible acid-CoA ligase" FT /function="COGs COG0318" FT /EC_number="6.3.2.-" FT /db_xref="GOA:Q6N6F2" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q6N6F2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28106.1" FT /translation="MSPPNTSPTLDGLFRRTLARQPDAIALIDPPDKQRITGQPPRRMT FT YAEADRAISALAAHFVTAGLPSNSVIAVQLPNTIEFPLTVLAAHRAGLVVALLPQLWRH FT ADLTAALNRTGARAIVSTRWIDGVSHSDLAMNAAAEAFSIRHVCGFGDDLPEGMASLDA FT AMEDPTALPPAPGPQEARRAAVISFDTTGDGVRAIPRSHLHLIAGGLVVFLESAIPQGA FT VMLSAQTPATFAGLASSMVTWLLSGGTLALHHPFDDAVLERQIVDLSCQALVAPAPLAL FT RLGEAGLTAQAPSLRSVVGLWRAPEQVASSPSWIGAPAHFTDIYLFGEAGLFGAQRAAD FT GTPAAIMPGPHTAPRDHAGGSTAGEILITPKGTLGLRGPMVTLAAYAPLPPLNSSIPMA FT PPPDFVDTGYAARLDRATGAVCITAPPAGVMAVGGYRFLAQDLQEWAKRLGQGALLTAL FT PDRLSGYRLAGRAQDNSRAREALAELGLNPLMVEAFRDAPKVDENRASTLTPH" FT CDS complement(248096..249976) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2666" FT /product="possible binding protein component of ABC FT transporter" FT /function="InterPro IPR000896:IPR000914 COGs COG0747" FT /db_xref="GOA:Q6N6F1" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q6N6F1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28107.1" FT /translation="MGRAESDHRFIRRTKALAAALAIGTGCLAGVTTAGAESVVTPAPG FT IVSHAIAMHGKPAQPADFTAMPYVNPDAPKGGRMIASVVGAFDSLNPLIVKGIAVQQMR FT GYVIESLLARGHDEPFTLYGLLARSVETDDVRSYVTFRIDPRARFSDGKPVTAEDVLFS FT WKLLRDKGRPNLRLYYGKVASAEALDPLTVRFDFGGAPDRELPLILGLMPVLPRHAVDP FT DSFEETSLKPPLGSGPYHVSHVQAGTSVTLTRDPNYWGRDLPINRGLWNFDEMRIDYFR FT ESNAQFEAFKRGLYDFRVETDPLRWSEGYDFPAARRGDVIRDAIKPGTPEPTDTLVFNT FT RRPVFADVRVREALLNLFDFEWINRNYFFGLYTRTAGFFGGSELSAYGRAADEGERKLL FT QPYLPRLRADILDGSFRLPESDGSGRDRAGLRRALDLLEQAGYQLDGTVLRKRDTRQPL FT TFELLVTTREQERIALAFARDLKRAGITVSVRTVDAVQFDQRRLAYDFDMIPNRWDQSL FT SPGNEQSFYWGSDAADTPGTRNYMGAKDPAIDAMIAALLRARGRTDFVDAVRALDRVLI FT SGFYVVPVYSVREQWIARWNRLERPKATALTGYLPETWWYRPPPQQPPQR" FT sig_peptide complement(249872..249976) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.540 atresidue 35" FT CDS 250195..250941 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2667" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR010642" FT /db_xref="UniProtKB/TrEMBL:Q6N6F0" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28108.1" FT /translation="MKSCNLVASAGPRGRAFALLAATAFAALTIAPAAQAQQPAPPKAA FT PKAAPKAAPAPAQQQAPAPEQQQVQLIYAPWTKFCLKGQDANAKQVCFTGKDGRIESGQ FT PVIAAVIIEPEGEPKKILRVTLPLGMQLVHGTRIIVDSNAPQQSPYVICFANGCMSDYE FT ATPDLISQLKKGQNLIVQAINSNGAPLTLPLPLGEFAKAYDGPPTDPKQFEETQKKLQE FT ELQKRAEEQRKKLEAQAPAGANPAAK" FT sig_peptide 250195..250305 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.987 atresidue 37" FT CDS complement(251027..251701) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2668" FT /product="unknown protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6E9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28109.1" FT /translation="MKMPGRHGFPARRLTRKHRSAETHTPARLSWEGPLMTLTPELLRQ FT TLTTVLNLAKREGGFDCRLIGTAADLLRGVPIEPGDVDFLMPTRSDVDTFARALAAYRC FT LSPPTWMPCCVQYYAAFEVGGVPVDASTVESPSQSTFIEAFGSGPWTHFSEVAVGDTRV FT AVVAPELRLATELCRDRKDRAEIIARWMRDHGCDTPLLRNAMKARGIDEATQSSVMASI FT TG" FT CDS complement(251743..252075) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2669" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR011722" FT /db_xref="UniProtKB/TrEMBL:Q6N6E8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28110.1" FT /translation="MIKTRTAKFQIGQIVRHRIFSFRGVVFDIDPEFANTEEWWLAIPE FT EVRPSKDQPFYHLLAENAESEYVAYVSEQNLLPDDSGEPIRHSQVAEIFIKDKSGGYRP FT RNPSLN" FT CDS 252198..253154 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2670" FT /product="probable transporter" FT /function="InterPro IPR004776 COGs COG0679" FT /db_xref="GOA:Q6N6E7" FT /db_xref="InterPro:IPR004776" FT /db_xref="UniProtKB/TrEMBL:Q6N6E7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28111.1" FT /translation="MIDILNLALPYFGLIFVGFACGRWKKLPEQGLVWMNFFLVFVSLP FT ALFFRIMSKTPFEELNNLPFVLATTLATAIAFFLSGMLGRLIGKLSMREATMAALSGGY FT GNIGYMGPGLALAVLGTQAAAPTALIFCFDTIFLFSIVPLGMALTAADKRPLIPTIIAV FT LREILFHPLIVAAYCGAAAAAFHVELPVAVDKMLAFLQNAAAPVALFTLGVTVALRPFG FT RVPWEIPSLVAVKLLLHPVIVFCLVLAFGPFSPEWAATAVLMASLPPALNVFVIARQYN FT TWVEPASVAVLIGTFMSVVTLTTVMWLIRTGQIPFPA" FT misc_feature order(252207..252260,252294..252353,252381..252449, FT 252486..252554,252567..252635,252696..252755, FT 252783..252851,252888..252956,252966..253025, FT 253062..253130) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(253160..254356) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2671" FT /product="putative FAD-dependent monoxygenase" FT /function="InterPro IPR000733 COGs COG0654" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6E6" FT /db_xref="InterPro:IPR010971" FT /db_xref="UniProtKB/TrEMBL:Q6N6E6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28112.1" FT /translation="MTQSLIEPNSYDAIVVGGGPAGLTAAIALAETGAVTALIARQVPY FT GDNRTTALLGDSIDILDRLDVWRRCSSKAAALRSMRLVDDTGRLIRAPEVKFASDEIGM FT DAFGYNIENRALLVGLEERAAELSNLQRFDDEAESVVPGDDEVIVRMRGGRTVSAKLVV FT GADGRQSQCREAAGIKVSSRALHQSALTFNVKTTRSHDNISTEFHTKEGPCVFVPLPGR FT RMSIVWVAAPKEAQRLMALSDDELSAAAEKQSQSIYGRMTVEPGRNLFPLAIEKPAAYA FT QRRIALVGEAAHVVPPIGAQGLNMGLRDAGDLAEIVRDAMANGTDIGSDAVMTRYGRSR FT GPDIASRTAAIDIANRTLLSDLLPAQMLRATGMHLISSVGPIRRFAMREGLSPFWRSI" FT misc_feature complement(254252..254317) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 254490..255224 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2672" FT /product="possible phosphatidylcholine synthase" FT /function="InterPro IPR000462 COGs COG1183" FT /note="Citation: Sohlenkamp et al. (2000) J. Biol. Chem. FT 275:18919-18925" FT /db_xref="UniProtKB/TrEMBL:Q6N6E5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28113.1" FT /translation="MTQLDPSPLPPGSGTRRAAALGVHLFTAFGAAIALLAMLEAVRQH FT WAGMFAWLGLALLVDAIDGPLARRLDVARLQPQWSGDVLDLVVDFLTYVFVPAYAITAS FT GLLLPIAAPLLGVGIVISSAMYFADRRMKTDDNHFRGFPALWNAAAFYLFLLHPPAIVG FT SLGIAALIGLTFVPFRVVHPVRVARLRGLTLALIALWAVLAAYAIFRDFEVPLPVTILL FT CAVALYVCLADTLIRLFRRAPR" FT misc_feature order(254547..254615,254724..254792,254802..254870, FT 254904..254957,254967..255035,255054..255113, FT 255141..255209) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 255221..255943 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2673" FT /product="possibly involved in transport" FT /function="InterPro IPR005496 COGs COG0861" FT /db_xref="GOA:Q6N6E4" FT /db_xref="InterPro:IPR005496" FT /db_xref="UniProtKB/TrEMBL:Q6N6E4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28114.1" FT /translation="MIELLSSPEAWAALLTLTALEIVLGIDNVIFLSVLVSRIPEPRAT FT RARQIGLGLALLFRLALLSVLVWLIGLTTPVFSIADRAFSWRDIILILGGLFLIAKATH FT EIHAEVEAKDGEAQPSTADRAFFWVIVQIVIVDLVFSIDSIITAIGMAQDIEIMVAAVL FT IAMAVMYVSSGPVARFVSEHPTTKMLALAFLVLIGVALVADGFAFHIPRGYIYFAILFS FT AAVEFFNVLAKRNRAKPR" FT misc_feature order(255263..255331,255368..255436,255467..255520, FT 255599..255667,255695..255763,255782..255850, FT 255860..255913) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 256030..257004 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2674" FT /product="quinone oxidoreductase" FT /function="InterPro IPR002085:IPR002364 COGs COG0604" FT /EC_number="1.6.5.5" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6E3" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N6E3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28115.1" FT /translation="MAKAVRVHQVGGPEVLVYEDVELPPPGEGEVRIRQHAVGLNFIDV FT YFRTGLYKAPSLPFVAGNEGAGEVVSVGPHVTNFHPGDRVAYYANLGGYATERNIEAAK FT LVKLPDHITYEQGAVLMLKGLTVWYLLHKTFKVEPGHRVLIHAAAGGIGLLACQWARAL FT GAHVIGTVGSKAKADLALANGCDHVILYNEEDWVARVKQISRNELCDVVYDGVGKATFP FT GSLKCIKPRGLFVSFGNASGPVPPFPLTELNNHGSLFATRPKLNDYIGTRKELIEGADT FT LFSAVIEGKLHVPINHAYALKDAAKAHIDLEGRVTTGASILKP" FT CDS complement(257183..258508) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2675" FT /product="Protein of unknown function UPF0004:Elongator FT protein 3/MiaB/NifB" FT /function="InterPro IPR005839:IPR005840:IPR006638 COGs FT COG0621" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6E2" FT /db_xref="InterPro:IPR013848" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6E2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28116.1" FT /translation="MQQATAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGAD FT LVIVNTCGFLDSAKQESLAAIGEAMATNGKVIVTGCMGAEPEQIEAAYPGVLSITGPQQ FT YESVLEAVHRARPALHNPHLDLVPPQGVRLTPRHYAYLKISEGCNNRCSFCIIPKLRGD FT LVSRPAGDVLREAEKLVAAGVKELLVISQDTSAYGVDVKYAESPWKDRAVRAKFLDLAS FT ELGELGAWVRLHYVYPYPHVDEVIGLMADGKVLPYLDIPFQHASPDVLKLMKRPAAQDK FT TLDRIKRWREQCPDLALRSTFIVGFPGETERDFEFLLEWLDEAEIDRLGAFKYEPVAGA FT PSNALPDQIADEVKQERWNRLMARQQAISARRLKRKVGTRQQVIIDEIGPTVAKGRSKA FT DAPDIDGAVYLSSRRPLRVGEIVTAKIDRADAYDLHGTVAGF" FT CDS complement(258908..259822) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2676" FT /product="transcriptional regulator, LysR family" FT /function="InterPro IPR000847:IPR001687:IPR005119 COGs FT COG0583" FT /db_xref="GOA:Q6N6E1" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q6N6E1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28117.1" FT /translation="MLAPLDLRLLQTFIVLVQTGSFSETSRRLGRTQPAVSLQLNRLEE FT ATGAPLFTKVGRKLVLTNHGELVLGYARTIMGLQDELRARLAAPKLDGVVVLGMPDLYA FT AYLLPGILADFRSAYPNVDVELKCALSSKLMASVERAEIDLAIVTGMPAFKVGELVAQE FT ELVWVASERSSVHLENPVPLAMLPPGNIFRDFGLAALESIGRIWRLSCISESISGIQAA FT VFSGIAVSVVGKSSVLPGMRILGRGDTFPALPKVDLVLYRSARSSNPAAEALASVIVRH FT FANSALAPSARFVRTQAGSGSHE" FT CDS 259924..260880 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2677" FT /product="putative substrate-binding protein, subunit of FT ABC transporter" FT /function="InterPro IPR001638:IPR006311 COGs COG0715" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q6N6E0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28118.1" FT /translation="MHNSTRRHFIRLAVTATALAATSLTALAEDRVIKVGTLKLIHGIT FT PYFYEKFVPAGVKVVVVPFESPTDGKNAVVTGSVDFGIFGLAAATLGGANGEPVVVVGA FT ACNRGMAVVAGKDSGIASIKDLKGKKVAIWPGSTQEVVILDRLAAEGMSIKDIQAVRVS FT FSDMAPALARGDIDAYVGAEPAAGISLASGVGKIVEYPYSTPTGSLNMVLSTRRELIEK FT DPELIRTLLKVHRKASEFAMSNRDAFVEMAMQKLGQQKASIEQAAPNVELTWNIDDQFL FT KQAQYYGAQMLDKKQIRQLPDYKTFIDPSFIKAISAS" FT sig_peptide 259924..260010 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.993 atresidue 29" FT CDS 260888..261772 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2678" FT /product="putative permease protein, subunit of ABC FT transporter" FT /function="InterPro IPR000515 COGs COG0600" FT /db_xref="GOA:Q6N6D9" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6N6D9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28119.1" FT /translation="MSLESTVSPSAMSGPAITKAAATVRGSTRQFAKLTARLRTTALAL FT IVPLGLLLVWDLMVRWTGTRLVPPPSGVATMMWDFAFGGIYDDAYSGSLPIHFWKSVQR FT VYGGFFLAALLGIPLGLMIGRIPLLRALLDPTLALLRPIPVTAWLPLSMIFFGLGPKSA FT VFLVFLGAFYPILLNTVFGVKSVDVRLFEAAGMLGCSGPQLFRSVVLPAALPSIFNGLR FT LGASFAWILIVVGEMTGVPEGLGAVIMDGRTLSRTDLVITGMIIIGITGFLSDRILVSL FT SNYFLRWSPQHHA" FT misc_feature order(260999..261052,261200..261268,261296..261364, FT 261377..261436,261560..261628,261662..261730) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 261765..262583 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2679" FT /product="putative transport system ATP-binding protein" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1116" FT /db_xref="GOA:Q6N6D8" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N6D8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28120.1" FT /translation="MLDQTTNRDAPPVILEVSGLNKIYQASNGPVEALRSVDLTVRKGE FT FICLLGASGCGKSTLLRIIAGFEQATQGSVGVYGCEVRGPGPDRGMVFQDYALFPWLTV FT RQNIGFGPSHRRVAPQEVDKLTDRFMAMVGLTAFADRYPHQLSGGMKQRVAIARVLAND FT ADILLMDEPFGALDALTRAALQEELIDIWRTTKLTVIFVTHSVEEAVLLADRVVVMSSS FT PGRIDQDVEIELPRPRDVASVEFNRLRRAITQQLTSHVGAGRKVAATADS" FT CDS 262585..263436 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2680" FT /product="conserved hypothetical protein" FT /function="InterPro IPR000379:IPR000734 COGs COG0657" FT /db_xref="UniProtKB/TrEMBL:Q6N6D7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28121.1" FT /translation="MDLSAPEASRAIYRGMDRAALDAAYNNSAAVVDSPQWLERWRERS FT AIRRSGPGVRLDIPYAERERTSLDYFASGETGAPLLVFLHGGYWQRNSKEMFSFVADGP FT NAHGIDVAVVGYTLAPAARLSDIVAEVDLALDVLAADTERFGFDRRRLVVSGWSAGGHL FT ASVASAHSAVRGAVCISGIFDLEPIALCYLDDALRLDRQEIEILSPIRRTRLGTAPQSL FT MVGGDELPELQRQSLDYANVAARAGLPITLSILPRHHHFSILDEWSADGALTAELLALA FT GA" FT CDS complement(263452..264216) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2681" FT /product="possible lactam utilization protein." FT /function="COGs COG1540" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR005501" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6D6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28122.1" FT /translation="MKIDLNCDLGEGFGVWQMGDDAAMMQIATSVNIACGFHAGDPDIM FT HATVKLAKQNGVAIGAHPGFRDLHGFGRRPVPGITAAEIENLVAYQIGALQAVAALAGH FT KVTHVKAHGALSNVACEDDMTARAIASAIKAVDPSLVFVVLANSKLMLAGEAAGLPLAH FT EVFADRAYEDDGNLVSRKKPGAVLHDPNEIAERVLRMAQDGAVVSVTGKVIKMRTDTVC FT IHGDTKGAVEIARGVRRKLEASGITVAPFAGT" FT CDS complement(264244..265254) FT /codon_start=1 FT /transl_table=11 FT /gene="uahA" FT /locus_tag="RPA2682" FT /product="Urea amidolyase-related" FT /function="InterPro IPR003778 COGs COG1984" FT /db_xref="GOA:Q6N6D5" FT /db_xref="InterPro:IPR003778" FT /db_xref="UniProtKB/TrEMBL:Q6N6D5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28123.1" FT /translation="MTKLVIDTVGPATSVQDAGRHGAQRYGLPPSGAMDRLSLAAANVL FT VGNSAFAAAIELGPLGAKLSVRDGAVRLALTGAERPAALDGQPLAFNESFTLAEGQILT FT LGVARGGVFSYLGIEGGVGGEPMFGSLAVNARAGLGSPYPRPLQAGDAIAVKSAAPSVE FT RRLDLPEQQDTPIRVVLGPQDDEFGAAVEIFLTGEWTMSATSDRMGYRLDGPQISHLHG FT HNIVSDGTVDGSIQVPGSGQPIVLMPDRGTSGGYPKIATVISADLGRLAQRQPGRPFRF FT QAVSVEEAQDAYRTMAKLIRSLPDLLRDAQHAIIDLDALLSANVAGTAIDALAAE" FT CDS complement(265251..265979) FT /codon_start=1 FT /transl_table=11 FT /gene="dur1" FT /locus_tag="RPA2683" FT /product="DUF213" FT /function="InterPro IPR003833 COGs COG2049" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR003833" FT /db_xref="UniProtKB/TrEMBL:Q6N6D4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28124.1" FT /translation="MTTPPPRMLPSGDTAITVEFGRDISDESNRRVLALDRKLKQAPIA FT GILETVPTYRSLLVHYDPETIGFGALSDQLTALAHTSDESETVAKRRWRIPVCYGGEHG FT IDLEDAAQALNITPDALVARHAAGDYRVAMIGFTPGWSYLSGLDPALAMPRRQAPRLHT FT PAGTISVGGIQTGIQCLAGPSGWHLLGRTPVRTYQLHREPIFLLEPGDAISFAQIDAKE FT FAERDDAASHGEVVAELLSA" FT CDS 266200..266913 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2684" FT /product="conserved unknown protein" FT /function="COGs COG0684" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR005493" FT /db_xref="UniProtKB/TrEMBL:Q6N6D3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28125.1" FT /translation="MSLTPEAIDILSRVSTATITTVLLKKGLRNVWIRGARPLRPGATR FT LVGEAFTLRFVPAREDLATPESWASPISTRAAIEAMPEGCIAVVDAMGIKDAGIFGDIL FT CARMVKRGITALITDGVVRDLEGVLGTGLPVWCDGAAAPPSVAGLTFVGWDQPIGCGGV FT AVFPRDIIVADQDGAVLIPQALLDHVLAEGPEQERMEGWIVEEVNNGAVLPGLYPMNAE FT TKARYAAFKEKADKT" FT CDS 266926..267333 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2685" FT /product="conserved hypothetical protein" FT /function="InterPro IPR007113 COGs COG1917" FT /db_xref="GOA:Q6N6D2" FT /db_xref="InterPro:IPR013096" FT /db_xref="UniProtKB/TrEMBL:Q6N6D2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28126.1" FT /translation="MDIFAAGSRPTQRAPKDYFTGTVWQDPIVAAPAPARLAATRVAFE FT PGARTAWHTHPLGQTLYVVTGVGRIQTEGGPVREIRAGDVVWIPPGEKHWHGASPSNGM FT THIAMQEALDGSFATWMEQVSDDDYAVAPSA" FT CDS 267462..268355 FT /codon_start=1 FT /transl_table=11 FT /gene="dapA2" FT /locus_tag="RPA2686" FT /product="dihydrodipicolinate synthase" FT /function="InterPro IPR002220:IPR003009:IPR005263 COGs FT COG0329" FT /EC_number="4.2.1.52" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6D1" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q6N6D1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28127.1" FT /translation="MMAAKTKFRGSFTALVTPFKNGALDEQAFRSLVNWQIEQGTHGLV FT PVGTTGESPTLSHEEHHKVVEWCIAEAKGRVPVIAGAGSNSTREAVELARHAEKAGADA FT VLVVTPYYNKPTQEGMYQHFKAVNDAIGIPIIIYNIPPRSVVDMSVDTMSRLYELDNIV FT GVKDATANLGRVSQQRHAMGPDFIQLSGEDMTALAYMAAGGHGCISVVSNIAPKLCSDL FT MGAVFAGDYPGALKIQDRLVPLHDAVFKEPGVAGAKHGLTLLGRIQEDVRLPLMTVTEP FT TGKAIRAAMVHAGVIN" FT CDS 268366..268845 FT /codon_start=1 FT /transl_table=11 FT /gene="mscL" FT /locus_tag="RPA2687" FT /product="large-conductance mechanosensitive channel" FT /function="InterPro IPR001185 COGs COG1970" FT /note="Citation: Moe et al. (1998) Mol. Microbiol. FT 28:583-595" FT /db_xref="GOA:Q6N6D0" FT /db_xref="InterPro:IPR001185" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6D0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28128.1" FT /translation="MNSTDSVRHFEQKGSKLLKEFRDFAMKGNVVDLAVGVIIGAAFGG FT IVTSLVGDVIMPIISAITGGLDFSNYFTALSKSVTANTLAEAKKQGAVLAWGNFLTVTL FT NFLIIAAVLFAVIRSLNKLKQQAEETKSPPPTPTRQEELLTEIRDLLKKGAGPSP" FT misc_feature order(268462..268530,268648..268716) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 268883..269356 FT /codon_start=1 FT /transl_table=11 FT /gene="SmpB" FT /locus_tag="RPA2688" FT /product="small protein B" FT /function="InterPro IPR000037 COGs COG0691" FT /db_xref="GOA:Q6N6C9" FT /db_xref="HSSP:1K8H" FT /db_xref="InterPro:IPR020081" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6C9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28129.1" FT /translation="MAEKNERAIKVVAENRKARFNYAIDDTIEVGIALTGTEVKSIRNG FT KTTIAESYADARGSEIWLINANIPEYLQANRFNHEPKRPRKLLLHRKQINKLIGAVERE FT GMTLIPLKLYFNERGRAKLQLALAKGKKLHDKRETEKKRDWSREKGRLLRSRG" FT CDS 269379..269957 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2689" FT /product="possible thiol-specific antioxidant related FT protein" FT /function="InterPro IPR000866 COGs COG1225" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6C8" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q6N6C8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28130.1" FT /translation="MTKQPDLLKVDWSAIPAPDDDGAAAHLPGARIQPVALPATDGSSV FT TLSSLPGRTVLFIYPRTGVPGQISLVDDWDMIPGARGCTPQTCSFRDLFTDLKTAGADA FT VFGLSTQSSAYQSEMATRLHLPFPVLSDESLELTRALNMPTMQVAGMTLLKRMALIIDD FT GRISHVFYPVFPPDRNAGDVLEWLKANPR" FT CDS complement(270071..270745) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2690" FT /product="possible uracil-DNA glycosylase" FT /function="InterPro IPR005122 COGs COG1573" FT /db_xref="InterPro:IPR005122" FT /db_xref="UniProtKB/TrEMBL:Q6N6C7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28131.1" FT /translation="MPTLTRGSGPRVPTSLTDPDRDCPFCPRLAEFRSEVRAREPGWFN FT APVPSFGGADASLLIVGLAPGLQGANRTGRPFTGDYAGDLLYATLIDYGFAQGHYQARP FT DDGLQLIDCRISNAVRCVPPQNKPLPLEINTCRRFLIATIEAMPKLRAIVLLGRIAHDS FT TLKALGLRAAQAPFGHGAVHDAGRLRLYDSYHCSRYNTNTGVLTPKMFRDVFARVRTDL FT DT" FT CDS complement(270751..271401) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2691" FT /product="DUF88" FT /function="InterPro IPR002790 COGs COG1432" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR002790" FT /db_xref="UniProtKB/TrEMBL:Q6N6C6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28132.1" FT /translation="MSTSSSNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGNLV FT RAFYYTAIIEDQEYSSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVD FT AMELAEHIDQMVLFSGDGDFRSLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFT FT DLVELQSKIGRDPADRPPPREPREPREPRHHAPQFLQRPTALASRAGADDFED" FT CDS 271748..272140 FT /codon_start=1 FT /transl_table=11 FT /gene="rnpO" FT /locus_tag="RPA2692" FT /product="RNA polymerase omega subunit" FT /function="InterPro IPR003716:IPR006110 COGs COG1758" FT /EC_number="2.7.7.6" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6C5" FT /db_xref="InterPro:IPR006110" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6C5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28133.1" FT /translation="MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSPLTIDRDNDKN FT PVVSLREIADQTISPEDLKEELVHSLQKFVEVDEPEPDTVPLIGSAGASVDADDTEVAM FT ERMTEEELLKGLEGLAPPEEQPEEDE" FT terminator 272183..272205 FT /note="TransTerm prediction, 98+%" FT CDS 272406..274688 FT /codon_start=1 FT /transl_table=11 FT /gene="relA" FT /locus_tag="RPA2693" FT /product="GTP pyrophosphokinase" FT /function="InterPro FT IPR002912:IPR003607:IPR004095:IPR004811:IPR006674 COGs FT COG0317" FT /EC_number="2.7.6.5" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6C4" FT /db_xref="InterPro:IPR004095" FT /db_xref="UniProtKB/TrEMBL:Q6N6C4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28134.1" FT /translation="MASGRQGSKQMEQAGGAAAVAEPTAVAKPRSRARMMRQYDLVERV FT RSYNPNTDEDLLNRAYVYAMMAHGEQTRASGDPYFSHPLEVAAILTNLKLDDATIVAAL FT LHDTIEDTEATRTEIDTMFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD FT VRVLLIKLADRLHNMRTLEFVPPASRQRIAEETLDIYAPLAGRMGMQEMREELEDLSFR FT SLDPEAFTVVMQRLDALAERNRNLIGEIESQLSANLARHGITAEVTGRRKRPFSIWTKM FT ERKSVGFEQLSDIYGFRVVLDNVEACYRALGVVHTTWPMVPGRFKDYISTPKQNDYRSL FT HTTVIGPGQQRVELQFRTREMNQIAEYGIAAHAFYKDGVGSPTELLNRESNAFAWLRHT FT IEMLSESSNPEEFLEHTKLELFHDQVFCFTPKGKLIALPRKANVVDFAYAVHTDVGNSA FT VGCKINGKFAPLSSELQNGDEVEVLTSPVQSAPPAAWESLAVTGKARAAIRRATRVAMR FT DQYAGLGRRIVERLFARAKIEYADDKLKGALPRLARASVEDVMASVGRGEMKASDVARA FT MYPDYKEERIARFGGKKDVPDKVIGKAPETGKVSSVIPIGGLHSGLPVKFAPNGGAVPG FT DRIVGIVTPGEGITIYPIQSPDLKEFEEEPERWLDVKWDIDETTPQRFPARLFVQNVNE FT PGSLAQIAGVIAEHDGNIDNINMSRRSPDFTELTIDLEVYDLKHLSAIIAQLRAKDVVA FT HVERVNG" FT CDS 274838..275602 FT /codon_start=1 FT /transl_table=11 FT /gene="pdxJ" FT /locus_tag="RPA2694" FT /product="pyridoxal phosphate biosynthetic protein pdxJ" FT /function="InterPro IPR004569 COGs COG0854" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q3V7S0" FT /db_xref="InterPro:IPR004569" FT /db_xref="UniProtKB/Swiss-Prot:Q3V7S0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28135.1" FT /translation="MSKAPPLRLGVNIDHIATLRNARGGRHPDPLRAAFAAIEAGADGI FT TAHLREDRRHIRDADMQRLKAEISKPLNFEMAATDDMIRIALGVKPHAVCLVPERREEL FT TTEGGLDVVGQQASLGPAIARFNDAGIRTSLFIAADPAQIEMAAKLKAPAIEIHTGAWC FT DAITDGDAAKANTEWQRIFAGAALARSAGLEVHAGHGLDYATAETISELPQIVELNIGF FT YMIGEALFVGLGETVRAMRAAMDRGRAKAIAA" FT CDS 275599..276039 FT /codon_start=1 FT /transl_table=11 FT /gene="acpS" FT /locus_tag="RPA2695" FT /product="acyl carrier protein synthase" FT /function="InterPro IPR002582:IPR004568 COGs COG0736" FT /EC_number="2.7.8.7" FT /db_xref="GOA:Q6N6C3" FT /db_xref="InterPro:IPR004568" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6C3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28136.1" FT /translation="MIIGIGSDLIDITRIAKVIERHGERFLDRVFTEAERAKAERRAKK FT SELVAATYAKRFAAKEACSKALGTGIRQGVWWRDMGVVNLPGGRPTMVLTGGAKTRLDA FT LTPPGMTARIDLSITDEWPLAQAFVVISAIPAAAEQAVHTSS" FT CDS 276281..277039 FT /codon_start=1 FT /transl_table=11 FT /gene="lepB2" FT /locus_tag="RPA2696" FT /product="putative signal peptidase I" FT /function="InterPro IPR000223:IPR000508 COGs COG0681" FT /EC_number="3.4.21.89" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6C2" FT /db_xref="HSSP:1B12" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:Q6N6C2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28137.1" FT /translation="MSVTSGTKSESGVGETIRVVIHALIIALIIRTFLFQPFNIPSGSM FT KATLLVGDYLFVSKYSYGYSHYSIPLSPPLFSGRIFGSDPNRGDVVVFRLPKDDSTDYI FT KRVIGLPGDRIQMREGLLYINDKPVDRERLSDYVGEDPCGSEATARVKRWKETLPNGVS FT YETLDCVDNGFYDNTNVYTVPPGHFFMMGDNRDNSTDSRVLSAVGYVPYENIIGRAQMI FT FFSIAEGEHAWQIWRWPTAVRWGRIFSIVR" FT misc_feature 276317..276385 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 277036..277854 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2697" FT /product="putative ribonuclease III" FT /function="InterPro IPR000999:IPR001159 COGs COG0571" FT /EC_number="3.1.26.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6C1" FT /db_xref="InterPro:IPR011907" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6C1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28138.1" FT /translation="MTDDVTNVEQPSTASEQQPQDVPAAEPSAAKKRRANKAKSKATAA FT AIEQRLGHSFADPSLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFP FT DADEGELSKRLADLVRKETCADVARSLDLVEGIKLGTVGAGAGAKLRKSVLGDICEAVI FT GAIYLDGGYEAASDFVRRNWTERMRKPARSLRDPKTVLQEWAQARGLPTPVYREVERTG FT PHHDPQFRVAVILPGLEPAEGLGGSKRAAEKVAASAMLAREGVGTGGNDG" FT CDS 277844..278770 FT /codon_start=1 FT /transl_table=11 FT /gene="era" FT /locus_tag="RPA2698" FT /product="possible GTP-binding protein Era" FT /function="InterPro FT IPR000215:IPR001687:IPR004044:IPR004087:IPR005225:IPR005662 FT COGs COG1159" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6C0" FT /db_xref="InterPro:IPR005225" FT /db_xref="UniProtKB/TrEMBL:Q6N6C0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28139.1" FT /translation="MMAEHEDAATAATRCGFVALIGAPNVGKSTLVNALVGSKVTIVSR FT KVQTTRALIRGIVIESGSQIILVDTPGIFAPKRRLDRAMVKTAWSGAHDADIVCVLLDA FT RAGINEQAEDILANLANVDRPKLLVLNKIDLIAREKLLALAQAANQRLAFDQTFMVSAL FT TGDGVDDLRKALAAQVPPGPFHYPEDQMSDAPLRHLAAEITREKIFRQLHQELPYQSTV FT ETDTWTERKDGSVKIEQTIFVERESQRKIVLGKGGATIKAIGAEARKEIGEILEQPVHL FT FLFVKVREDWGNDPDRYREMGLEFPKE" FT CDS 278767..279168 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2699" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6B9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28140.1" FT /translation="MTTSTTTSLPRNVYWFEVLLLTSLMLDCISVAFQDRTVIEPNMSA FT GVIAAANTMAAALIVLLTYLVWLAAHARKNWARAVLTASLVFSVVSLAQIVGDSGIESG FT LWIDIASCILTAAGLYLSYTGDARGWFTA" FT misc_feature order(278803..278862,278905..278973,278992..279051, FT 279079..279138) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 279211..279963 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2700" FT /product="putative DNA repair protein RecO" FT /function="COGs COG1381" FT /db_xref="GOA:Q6N6B8" FT /db_xref="InterPro:IPR003717" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6B8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28141.1" FT /translation="MEWSDEGIILGVRRHGESAAIVELLTRGHGRHLGMVRGGASARMR FT PLLQPGNSVLASWRARLDEHLGYYQLEATKMRAATLLGSSHAVYGVTHLASLARLLPER FT DPHEEIYQRLVLTLDDFDDFGVAAAHLIRFELAILAELGFGLDLSACAATGSTTELIYV FT SPKSGSAVSRSAGEPWRDRLLRLPAFLRDDEAESGHGWSGQDLFDGFELTGRFLLRNVL FT EPRGQSHSDARAGFINAITRALQRPAES" FT CDS complement(280003..280872) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2701" FT /product="conserved hypothetical protein" FT /function="COGs COG0702" FT /db_xref="GOA:Q6N6B7" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N6B7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28142.1" FT /translation="MSASRFLITGASGQLGRLVVDGLLKSVPPAQIGVLVRSEKVAAEF FT AAKGLHVHIGDYSNPETLGPAFAGVERALLISSSEIGQRAVQHRNAIEAARAAGVSLLA FT YTSLLHADTSPLGLAEEHRQTEAALKASGVPHALLRNGWYSENYTASIPAALAHGALLG FT SAGNGRIASAARADYAEAAVRVLTAEQPQAGRIYELAGDDAYTLAEFAAELSKQSGKAV FT AYRDLPQGDYEAALIAAGLPKPFAALLADSDAGAAKGALFDDSRTLSQLIGRPTTPIAT FT TISAALKA" FT CDS 280955..281467 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2702" FT /product="DUF24, predicted transcriptional regulator, FT related to MarR family" FT /function="InterPro IPR002577 COGs COG1733" FT /db_xref="InterPro:IPR002577" FT /db_xref="UniProtKB/TrEMBL:Q6N6B6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28143.1" FT /translation="MTRSPGENLSVAAHRATLTDRYAAWREQGFDANRCPVRNVLDHLG FT SKWSTLLLIALAEKPMRFNALLRDVPDISKRMLTQTLRDLERDGLVARQVFPTKPPSVE FT YRLSASGESVLAPLTALVAWAEQHFPEIERARARFDSAARDGEPQVPGDSARPESPLAL FT APLPVRG" FT CDS 281477..283738 FT /codon_start=1 FT /transl_table=11 FT /gene="parC" FT /locus_tag="RPA2703" FT /product="DNA topoisomerase IV subunitA" FT /function="InterPro IPR002205:IPR005742:IPR006691 COGs FT COG0188" FT /EC_number="5.99.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6B5" FT /db_xref="HSSP:1AB4" FT /db_xref="InterPro:IPR013757" FT /db_xref="UniProtKB/TrEMBL:Q6N6B5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28144.1" FT /translation="MGKRLIPPEPAEIHEVQLREALEERYLAYALSTIMHRALPDARDG FT LKPVHRRILYGMRLLRLDPGTPFKKSAKIVGDVMGSFHPHGDQSIYDALVRLAQDFSSR FT YPLVDGQGNFGNIDGDNPAAYRYTEARMTDVARLLLDGIDEDGVAFRANYDGQSKEPVV FT LPGGFPNLLANGAQGIAVGMATAIPPHNAAELCDAALHLIEKPDAKSKALLRFVKGPDF FT PTGGIIIDSKESIAEAYTTGRGAFRTRAKWEQEEGARGTWTVVVTQIPWLVQKSRLIEK FT IAELLNEKKLPLVGDIRDESAEDVRIVIEPKSRSVDPTLMMESLFRLTELESRIPLNLN FT VLVKGRIPKVLGLAECLREWLDHLRDVLLRRSEYRKGQIEHRLEVLGGYLIAYLNIDKV FT IKIIRTEDEPKPVLMKAFNLTEIQAEAILNMRLRSLRKLEEFEIRTEDKNLRAELKGIN FT AVLKSETEQWAKVGEQVRKVREMFGPKTPLGKRRTQFADAPEHDLAAIEEAFVEREPVT FT VVISDKGWVRTLKGHVEDLSGLNFKQDDKLGQSFFAETTSKLLLLATNGRFYALDVAKL FT PGGRGHGEPIRMFIDMEQDAAIVTVFVHTGGRKFLIASHDGQGFVVNEDECVGSTRKGK FT QILNVDVPNEARALTVVSEGDDSIAVIGDNRKMVIFPLDQVPEMTRGRGVRLQKYKDGG FT LSDIATFSSKQGLGWRDSAGREFSATMKELAEWRGNRADAGRLPPKGFPKSNKFGRSIA FT " FT CDS 283824..285254 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2704" FT /product="possible Na+/? antiporter" FT /function="InterPro IPR001687 COGs COG1055" FT /db_xref="GOA:Q6N6B4" FT /db_xref="InterPro:IPR004680" FT /db_xref="UniProtKB/TrEMBL:Q6N6B4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28145.1" FT /translation="MIERYSRRFRLLIPLLVFAALPGPAQAADLDGAALGWAWGVPFAG FT ILLSIALGPLLAPKIWHAHYGKIAAGWGVLALAPIAVVYGWDIALASLIHALLAEYLSF FT IVLLFALFTVSGGILVTGTIRATPLINTGMLAVGTACASLIGTTGAAMVLIRPLIRANA FT GRQHNVHVVVFFIILVANIGGALSPLGDPPLFVGFLRGVDFFWPVQHLWQQTLIVAGVL FT LVVFYLLDRWYARHDAPAKTSEAPIGFRGGINFLLIAGIIATILACAQWHPGIEFDVYG FT TKVALQNLVRDAMLVVLALLSLWWTADEHRAANGFTWEPIREVAKLFAGIFVAIIPVLA FT MLHAGKSGLFAPLLEAVTASDGTPREVPYFWFTGLLSAVLDNAPTYLVFFELAGGRPAE FT LMGPLAGTLAAISMGSVYMGALTYVGNAPNFMVYAIATERGIKMPGFFGYALRAGLVLI FT PLFLLLTFLPIVPNLRLH" FT sig_peptide 283824..283907 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 28" FT misc_feature order(283926..283994,284037..284105,284124..284192, FT 284220..284288,284325..284393,284451..284510, FT 284577..284645,284688..284741,284802..284855, FT 285036..285104,285165..285233) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(285268..285633) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2705" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6B3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28146.1" FT /translation="MRSRSLRRPSRGPWNSLPQKTPVVIDQASTVRFLAQDRPCRDFPA FT CVRPQIAHNAAMSNQAPERMSFSGLLGWATKPPQAYLVYAICVVLVGGVSFYVGTLKPK FT HTPGLPPAPAATAPQSK" FT misc_feature complement(285337..285393) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 285718..287091 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2706" FT /product="manganese transport protein" FT /function="InterPro IPR001046:IPR006162 COGs COG1914" FT /note="Citation: Kehres et al. (2000) Mol. Microbiol. FT 36:1085-1100" FT /db_xref="GOA:Q6N6B2" FT /db_xref="InterPro:IPR006162" FT /db_xref="UniProtKB/TrEMBL:Q6N6B2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28147.1" FT /translation="MDARSPQMTADPSPAPEQTTGWRLARGEPSLAGMFGSVPTRAKGP FT FWRKLIAFLGPGYLVAVGYMDPGNWATSLAGGSKYGYALLTVALVSNIMAVVLQSLCTR FT LGVGAGRDLAQACRDAYPKWVSWPLWLSAEIAITATDLAEVIGTAIGLNLLFGIPLEIG FT VLITAADVFLVLALQAFGFRWIEAFVVALLGVIAACFAIQIAMADPDWGAVIRGFAPTT FT RVLTEPGMLYLALGILGATVMPHNLYLHSGLVQTRGFGHSPAEKHEAIKLATFDSTIAL FT TFALTINASILILAAATFHHAGKTDIAELDQAHAFLAPLLGSTLAPTLFGIALLACGLN FT STITATLAGQIVMEGFIQIRIKPWLRRMVTRLIAIVPAVAVTIIAGEKGTGQLLILSQV FT VLSLQLPFAVVPLVVFTASRAKMGEFVAPRWLTAIASLIAAIIVALNIKLVFDYATGG" FT misc_feature order(285853..285912,285955..286023,286084..286137, FT 286180..286248,286267..286335,286405..286464, FT 286552..286620,286663..286731,286822..286875, FT 286903..286971,286990..287058) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(287151..287972) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2707" FT /product="probable transcriptional regulator, AraC family" FT /function="InterPro IPR000005 COGs COG2207" FT /db_xref="GOA:Q6N6B1" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q6N6B1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28148.1" FT /translation="MLMESVVSVFDPDLTHLPAVAHRLQFSDPESEVPLHVHRKGQLIL FT ALHGAVTCTAGNEIWIVPPNCGVWIPGGVPHSARATANAQLNYLFVEPEAANLPGSSCT FT LAISPLIREMVERLAEERADYLADSHAARIARVLLDELADMPRERFNLPISSHPKIRAI FT ADALTAEPSDRRTLSDWAKQVAMSERSLARLLIRETGLTFGRWRQQLHLVVALRELASG FT EAVQNVAAGLGYESVNAFITMFKKALGSTPAQYFAQRHAPTKAGSGEQNRV" FT CDS 288079..290172 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2708" FT /product="possible fusaric acid resistance pump" FT /function="COGs COG1289" FT /db_xref="InterPro:IPR006726" FT /db_xref="UniProtKB/TrEMBL:Q6N6B0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28149.1" FT /translation="MTRTCPAARQALTNFLRQPARKEDADAILFSAKSFAAAMLAYYVS FT LRIGLPKPFWAIVTVYIVSQTSAGASLSRGVYRFAGTFVGAIATVAIVPNFVNDPIVCC FT MILAGWIGRCLFLSLLDRTPRAYAFVLAGYTTSLIGFPSVLDPGAVFDTASLRVQEICI FT GILCAVLIHRYVWPKPMTGLFTGKLSAMLQDARRLASVALTASSEENRQRREQLAVDLL FT MLQGLATHLPYDSASARPRRETLQLIHDRLARLLPLTSEIEDRVRSLNIERVATVDELT FT ALIIDVGGWIAVEKPDDQHAEAARLIRRARSIQKRLGPDATMPADRVGANLAGHLAEMI FT GLLNDCDKLSQSMTASGRVRKAAALHGPELAKGYVYHRDPWMAARAALGAMVSILGGCA FT FWIWSAWPDGGTAVSILGVCCTLFGNVDTPVPFVVKYIVGSIFGVLISLVYSFVILPHV FT TNFAVLVAVLAPAFLFAGSLQARAPTAFMAMGITLTIPILSGLGTSYTGDFAASLNMAI FT ALFVAVGFAAVSMSIFQTVPVDVSINRLLHLSRRDVGRRALGGAPNEARWTSLMIDRTA FT LLLPRLRAARKAYADVVDDTLRLLRIGHVAGQLRKMVPQLKGEARAAIDGLLTEIAAHF FT RGRRPTTPAVLIDFDQRIERLTAMMEHCSPKSRLRIFDLLIDLRFALGASGAAGKGALP FT HDH" FT misc_feature order(288301..288369,288379..288438,288457..288513, FT 288541..288609,289219..289287,289372..289440, FT 289459..289518,289531..289599,289624..289692) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 290162..290377 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2708a" FT /product="hypothetical membrane protein" FT /db_xref="InterPro:IPR012451" FT /db_xref="UniProtKB/TrEMBL:Q6N6A9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28150.1" FT /translation="MITDLNIGGVLIPGLVVVAFIGLIITIATMRVCTEIGVSRLFAYR FT PLAEIAIFVIVCGLLMQYLPVIGLSL" FT CDS 290374..291276 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2709" FT /product="possible FusE-MFP/HlyD family membrane fusion FT protein" FT /function="InterPro IPR006143 COGs COG1566" FT /db_xref="GOA:Q6N6A8" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q6N6A8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28151.1" FT /translation="MKPLLSLLGHYALTLCVFVASGFVALQAWSHYERTPWTRDGRVSV FT DVVQIAPEVSGTIRTVPIADNQYVKRGDVLYEIDPERLRLAVALAEADVEAKYQDMLVR FT QATAQRKQQLKLNDVVSQEALQQSSGAAAMATAAYQAALATRDLAKLNLARSVIRSPVD FT GYVTNLKLRPGDYATAGVTNVAILDGASFWITGYFEETKLQQIRVGAPARVKLMGFDQP FT AAGHVESIGRGIENSNETPGRFGLPNVAATFSWVRLAQRIPVRIHLDRVPSGVELAAGM FT TATVEIIPPEVEANAGRRS" FT sig_peptide 290374..290457 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.918) with cleavage site probability FT 0.446 atresidue 28" FT misc_feature 290392..290460 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(291369..292145) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2710" FT /product="Arginine-tRNA-protein transferase, N terminus" FT /function="COGs COG2935" FT /db_xref="GOA:Q6N6A7" FT /db_xref="InterPro:IPR007471" FT /db_xref="UniProtKB/Swiss-Prot:Q6N6A7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28152.1" FT /translation="MTQHSRDTPQFYLTAPSPCPYLPGRHERKVFTHLVGNKAGELNDL FT LTHGGFRRSQSIAYRPACDQCRACVSVRVIANEFKPSRNQRKLLARNADIVGEQRNPVP FT TSEQYSVFRAYLDQRHRYGGMADMTVLDYAMMVEDSHVQTRMIEYRKRTPDTGITGRGG FT ELIAAALTDVLGDGLSMVYSFYEPNEQHRSLGTFMILDHIARARRLGLPYVYLGYWIEG FT SKKMDYKGRYLPQQRLAPSGWLRIDASGEMQPEPQD" FT CDS complement(292214..292828) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2711" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR010432" FT /db_xref="UniProtKB/TrEMBL:Q6N6A6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28153.1" FT /translation="MSRQPCKAPLPSPCRTGSFRFGRTTESRLMADYGGSGWRGGEVRE FT AAFDPWLNPELFQGVLTKRVFAFLIDLVVLTVPVLMVTVFIAMFGLVTLGIGWTLFWLV FT SPLSVIWALVYYGASLGGPHSATIGMRTMGLELTTWTGEPGYFVLGAAHAFLFWLSLSM FT LTPLVLLVGLFNARRRLLHDIVLGTVIINSTVPASQPARSY" FT misc_feature complement(order(292301..292366,292481..292546, FT 292568..292633)) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT terminator complement(292835..292875) FT /note="TransTerm prediction, 98+%" FT CDS complement(292899..293951) FT /codon_start=1 FT /transl_table=11 FT /gene="hemB" FT /locus_tag="RPA2712" FT /product="delta-aminolevulinic acid dehydratase" FT /function="InterPro IPR001731 COGs COG0113" FT /EC_number="4.2.1.24" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q9ZNH5" FT /db_xref="HSSP:1GZG" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q9ZNH5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28154.1" FT /translation="MAIKFGRPIEIRDPSTRPAAPPLDLTIRPRRNRKTEWARRLVREN FT VLTTDDLIWPMFVVDGTNQRVQVASMPGVERLSVDQIVRDAERAAKLDIPCIALFPFTE FT PSLRDEHGTEAANPENLICKTVRAIKKEFPQIGVLCDVALDPYTSHGHDGLIEDGRILN FT DETVAVLVQQSLVQAQAGCDVIAPSDMMDGRIGAIREALDAAGYLDVQIMAYAAKYASA FT FYGPFRDAIGSAKALTGDKRTYQMDPANTDEAIREVELDLAEGADMVMVKPGMPYLDIV FT RRVKETFGVPTFAYQVSGEYAMIAAAANNGWLDGDRAMMESLLAFKRAGANGVLTYFAP FT AAAEKLRQQG" FT CDS 294145..294609 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2713" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6A4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28155.1" FT /translation="MSELPPREQPPRDQAISVAAISPERPDNHENDWTRRLVLFLRVMA FT VLSVAKGLYHWAQITGFVGGEDDAFEVQTMAWQTATIYFAVIELVAAVGLWLATPWGAV FT VWLTTVVSMAVIELMFPAIYGGSLLVVLGEALLLAAYLALAWMAARERPP" FT misc_feature order(294256..294324,294367..294435,294448..294516, FT 294526..294594) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 294687..296252 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2714" FT /product="putative long-chain-fatty-acid--CoA ligase" FT /function="InterPro IPR000566:IPR000873 COGs COG0318" FT /EC_number="6.2.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6A3" FT /db_xref="HSSP:1BA3" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q6N6A3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28156.1" FT /translation="MDQLHSGGTGGSLIVNAIARYGDRPAIADGSIRWSYRELGDAIGR FT FITLFRDCGLAKGSALSILSSNRAESWAAICAATVMGMRYTPLHPMAAEDDHTFIIEDA FT EIDALIVEGGKFAARGEAIRARVPGLKHLLSFGAVNGARDLLEGFAAVQPAPLVDDSAT FT SDIAWLAYTGGTTGRSKGVMIPHRALTTMAVILYSDWDWPADIRYLAATPISHAAGVTV FT YPVMMRGGFTRLVQGFEVESYCRVIAEDKITAVFLVPTLIYALIDAAEVRARHDLSSLD FT MIVYGAAPMSPDRLREGIKIFGNVFVQLYGQTEAPQCITTMRKVDHDDTKPGRLGSCGR FT PSPLLDVKLFDSEMREVGTGEPGEICVRGTLVMDGYWKRPEATAEAFRGGWLHTGDVAV FT KDADGYLYIVDRTKDMIISGGFNIYPREVEDALMAHHAVASAAVIGVPDDKWGEAVKAF FT VVLKPGANNDAAELQAHVKDKRGAPWSPKSIDFVEAIPVTGLGKIDRKVLRAPYWEGRN FT RGVA" FT CDS 296605..297123 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2715" FT /product="possible transcriptional regulator, MarR family" FT /function="InterPro IPR000835 COGs COG1846" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N6A2" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q6N6A2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28157.1" FT /translation="MIKAVATAAEASAPAVAANTPVQPLYLEALTLVERLHRRLLDVIK FT DEFDRRGRADINSVQALLLYNIGDKELTAGELRTRGYYLGSNVSYNLKKLVELGFLDHQ FT RSRVDRRSVRIRLTPQGQEVRHIVDALYQKHVKTVEQVGGISSEEFATLNKSLHRLERF FT WTDQILYRL" FT sig_peptide 296605..296658 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.977) with cleavage site probability FT 0.857 atresidue 18" FT CDS 297338..297565 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2716" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6A1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28158.1" FT /translation="MLIERGLRVMNVDTIGKAYDIAANYLRRTGSIPDTTATHDALLES FT IVRMFQRGETHPIRLANKAISIFESAKIAA" FT CDS 297582..297797 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2717" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N6A0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28159.1" FT /translation="MQRAIDRVIQTYGLLTNQEAAENAKAKVETYIRTLFEAGETDDNR FT LTVCGLVYLRELDGSNDPVKAGYTGM" FT CDS 297815..298378 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2718" FT /product="hypothetical protein" FT /function="COGs COG0630" FT /db_xref="UniProtKB/TrEMBL:Q6N699" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28160.1" FT /translation="MMRLIAGLVAILPAIVIVTGVIAGQETPRKHALIEGLGIKQVFGW FT PPNAADVLRYLHQFNMFQAQAAALADSRGDDALRQFAITQARQARERDQQVFRLNTFTL FT LSIDFPDHPNVILSNELAGLRGAVGERFMTEFHAKQIKEFRRMIALMRRFMLHPDNDLI FT RRFAIEQLPLLERDLAVLEGQATS" FT sig_peptide 297815..297886 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.994) with cleavage site probability FT 0.820 atresidue 24" FT misc_feature 297827..297886 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 298416..298835 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2719" FT /product="conserved hypothetical protein" FT /function="COGs COG2346" FT /db_xref="GOA:Q6N698" FT /db_xref="InterPro:IPR001486" FT /db_xref="UniProtKB/TrEMBL:Q6N698" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28161.1" FT /translation="MAYIVAMSLAHSDILNDDQIAQLVRTFYGRAREDEVIGPIFASAV FT HDWDHHIAQITDFWSSMLLKTGRYGGRPMRPHLMLNLAPEHFDRWLKLFEATATELFTP FT EVATEFIIRARRIADSFEMGIATTQGKVATPRHSV" FT CDS complement(299006..299878) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2720" FT /product="possible glutathione-S-transferase" FT /function="InterPro IPR004045:IPR004046 COGs COG0625" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N697" FT /db_xref="HSSP:1K0D" FT /db_xref="InterPro:IPR010987" FT /db_xref="UniProtKB/TrEMBL:Q6N697" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28162.1" FT /translation="MTDAPYTPPKVWTWDKENGGKFASINRPIAGPTHDKELPVGKHPL FT QLYSLATPNGQKVTILLEELLARGHTGAEYDAWLIKIGDGDQFSSGFVQVNPNSKIPAL FT LDRSVNPPQRVFESGSILLYLAEKFGEFIPKYPAGRTECLNWLFWQMGSAPYLGGGFGH FT FYAYAPEKWEYPINRFAMEVKRQMDVLDRRLAETEYLAGAEYSIADIAVWPWYGGLANG FT VLYGDSATFLDVASYKNVQRWTKAIGARPAVKRGRIVNRISGDLSTQLHERHDAGDFET FT KTQDKLEAK" FT CDS 300087..300356 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2721" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N696" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28163.1" FT /translation="MRPPSSRYATTRATTQRTMDDMDKKAMREEAERLMREAMANRNVT FT VKQGDTVINTTCGKCGAPNKVKAPKGVTRVAYVCKECGAKQETL" FT CDS complement(300582..301205) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2722" FT /product="possible MutT-like domain" FT /function="InterPro IPR000086 COGs COG0494" FT /db_xref="GOA:Q6N695" FT /db_xref="InterPro:IPR000086" FT /db_xref="UniProtKB/TrEMBL:Q6N695" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28164.1" FT /translation="MEDRWLTWAKQLQAIASTGLSFCKDEFDQERYGEIAHIANSMIAQ FT LGTVPIERIEGLVSDFAKGYATPKVDVRGAVIEKDKILLVRERSDGCWTLPGGFADVGR FT SAAENVVKEIREEAGIAVSARSLYSVRHKAKQPYEPDARDFYKLFFICERTDLTAPSAR FT GETTDVDFFPADRLPRLSRGRVVESDIEAAFAFQRGSLHTTIFD" FT CDS complement(301431..301994) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2723" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N694" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28165.1" FT /translation="MALIDKYVPAFSFNERHAVLVDAPGDKVLDAILGFRPEDDPFFRL FT MITLRELPMRAARVFGGDGQVSPKVFGIDDFTLLEHDNREVVFGLVGQFWRPDFGLARI FT PDGAAFAAFQRAGYVKLALNFATDAQSDGRIRLTTETRAFCPDRGARLKLLPYWYAIRP FT FSGLIRRRILAGLKRRSEAAGVSH" FT CDS 302458..303756 FT /codon_start=1 FT /transl_table=11 FT /gene="glyA1" FT /locus_tag="RPA2724" FT /product="glycine hydroxymethyltransferase" FT /function="InterPro IPR001085 COGs COG0112" FT /EC_number="2.1.2.1" FT /note="observed by proteomics" FT /note="Citation: Rossbach and Hennecke (1991) Mol. FT Microbiol. 5:39-47" FT /db_xref="GOA:Q6N693" FT /db_xref="InterPro:IPR019798" FT /db_xref="UniProtKB/Swiss-Prot:Q6N693" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28166.1" FT /translation="MSTANPASAPDSFFSASLEQADPEIAAAIRGELGRQRHEVELIAS FT ENIVSRAVLEAQGSVMTNKYAEGYPGNRYYGGCEFVDVAENLAIDRAKKLFGANFANVQ FT PNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHGAPVNMSGKWFKPVHYTVRREDQM FT IDMDAVAKLAEEAKPKLIIAGGSAYPRAWDFKRFREIADSVGAYFMVDMAHFAGLVAGG FT VHASPVPHAHVTTTTTHKSLRGPRGGLILTNDEALAKKFNSAIFPGLQGGPLMHVIAAK FT AVAFKEALQPDFKVYTKNVVENAKALAETLRSAGFDLVSGGTDNHLMLVDLRPKGLKGN FT VSEKALVRAGITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGHLIAEVL FT NAIAQSSDGAAPLVEASVKQRVKELTDRFPIYQ" FT CDS 303859..304341 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2725" FT /product="DUF193:ATP cone domain" FT /function="InterPro IPR003796:IPR005144 COGs COG1327" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N692" FT /db_xref="InterPro:IPR003796" FT /db_xref="UniProtKB/Swiss-Prot:Q6N692" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28167.1" FT /translation="MRCPNCNSLDTQVKDSRPTEDSSVIRRRRVCIACNFRFTTFERVQ FT LRELIVIKRNGRRVPFDRDKLMRSVQISLRKRPVDPERVEQMVSAIVRELESGGEAEIS FT SETIGESVMDHLRKLDDVAYVRFASVYRNFREAKDFEAVLGELSHEDEARAALVRK" FT CDS 304338..305507 FT /codon_start=1 FT /transl_table=11 FT /gene="ribD" FT /locus_tag="RPA2726" FT /product="putative riboflavin-specific deaminase / FT reductase" FT /function="InterPro IPR002125:IPR002734:IPR004794 COGs FT COG0117" FT /EC_number="3.5.4.26" FT /note="EC_number 1.1.193.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N691" FT /db_xref="InterPro:IPR002734" FT /db_xref="UniProtKB/TrEMBL:Q6N691" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28168.1" FT /translation="MIFRILEEQIGQKLAAEKAAKAGDSADRRFMQLALALGRRGQGRT FT APNPAVGAVLVKDGVIVGRGWTQDGGRPHAEVEALRRAGDAARGATLYVTLEPCSHHGR FT TPPCADAVIAAGIARVVSAIEDPNPLVAGQGHARLRTAGIAVEIGVCAEEAARDHAGHI FT RRIRDRRPHVTLKLAVSADGKIAAAGHKPVAITGEAANARTHLLRARSDAVLIGIGTVL FT ADDPELTCRLPGMAAQSPIRVVLDRSLRIPAASKLLHSARTTPLWLMASEIAEAATAAR FT LGAAGAEVIHVADCADTPGLDLPAVLHALADKGVTRLFVEGGARVAASLVAGELADEIW FT LWRSDNAIGADGIDALHDLPLTAMTDSPHWRVRTTERVGADTLTIYDPN" FT CDS 305518..306126 FT /codon_start=1 FT /transl_table=11 FT /gene="ribC" FT /locus_tag="RPA2727" FT /product="riboflavin synthase alpha chain" FT /function="InterPro IPR001783 COGs COG0307" FT /EC_number="2.5.1.9" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N690" FT /db_xref="InterPro:IPR001783" FT /db_xref="UniProtKB/TrEMBL:Q6N690" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28169.1" FT /translation="MFTGIVTDIGEIETVKPVAQGQLHRLRIRCAYDQSTIADGASIAS FT NGICMTVVGSGTAGGKTWYEVDAGAETLAKTTAKAWIAGTRLNLERALKIGDELGGHIV FT TGHVDGIAKVVAREELPDMARFTLETSRELARFIAPKGSVTLDGTSLTVNTVEDTKFSV FT LIIPHTLSATILGGWQVGSEVNIEVDLMARYAARLSEMK" FT CDS 306257..306748 FT /codon_start=1 FT /transl_table=11 FT /gene="ribE" FT /locus_tag="RPA2728" FT /product="riboflavin synthase, beta chain" FT /function="InterPro IPR002180 COGs COG0054" FT /EC_number="2.5.1.9" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P61726" FT /db_xref="InterPro:IPR002180" FT /db_xref="UniProtKB/Swiss-Prot:P61726" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28170.1" FT /translation="MADARRAPLKDQTDVSGARVLIVEARFYDDIQDALLEGAVAELKA FT AGATHDVLTVPGALEIPAAVAIAIDSAEAAGKPYDAAIALGCVVRGETIHFEIVSMESA FT RALMDLSVARKFPLGNGIITVNTDEQAWARAKPGDLNKGGDAARAALAMLRIKRRLAKA FT " FT CDS 306754..307278 FT /codon_start=1 FT /transl_table=11 FT /gene="nusB" FT /locus_tag="RPA2729" FT /product="antitermination factor, NusB" FT /function="InterPro IPR006027 COGs COG0781" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N688" FT /db_xref="InterPro:IPR006027" FT /db_xref="UniProtKB/Swiss-Prot:Q6N688" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28171.1" FT /translation="MAEINKPAFKKPDLKKMTPKGERKANRRGAARLAAVQALYQMDIG FT GAGINETFAEFESFWIGNEVEGEQYLPAEAAFFRDIVAGVVREQKQIDPLIDDLLARGW FT PLARIDAILRAVMRAGAYELEHRKDIPARVVVSEYVDVAHAFVEKDETGMVNAVLDQIA FT RRFREDEFTRS" FT CDS 307472..308452 FT /codon_start=1 FT /transl_table=11 FT /gene="thiL" FT /locus_tag="RPA2730" FT /product="putative thiamine-monophosphate kinase FT (thiamine-phosphate kinase)." FT /function="InterPro IPR000728:IPR006283 COGs COG0611" FT /EC_number="2.7.4.16" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N687" FT /db_xref="InterPro:IPR006283" FT /db_xref="UniProtKB/TrEMBL:Q6N687" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28172.1" FT /translation="MPRMPSGEDDLIARYFKPLATDPGARGLVDDAAVLAATGSDLVLT FT TDAIVEGVHYLPDDPPAAIARKALRVNLSDLAAKGAEPAGFLLTLALRQADEGFLAPFA FT AALGEDAVAFRCPLLGGDTVSTPGPMMISVTALGRVPPGRMVARDALRPGDAIVVTGTI FT GDAALGLDLLQGRATAATEAGRAFLIDRYRVPQPRSALTRAVRDFAGAAMDVSDGLAGD FT LAKMCAASGVTATLDATAVPLSDAARAIAGTDESKLARLLSGGDDYELLCGVAQSKLDQ FT FLAAAQRSHVQVTVIGVAEEGTRSPRWLGASGAEIPLQTLSFSHF" FT CDS 308681..310801 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2731" FT /product="H+ translocating pyrophosphate synthase" FT /function="InterPro IPR001687:IPR004131" FT /note="observed by proteomics" FT /note="Citation: Baltscheffsky et al. (1998) Biochim. FT Biophys. Acta 1364:301-306" FT /db_xref="GOA:P60363" FT /db_xref="InterPro:IPR004131" FT /db_xref="UniProtKB/Swiss-Prot:P60363" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28173.1" FT /translation="MTALWVIVLCGALSIVYAIWATSSVLAADQGNARMQEIAGAVREG FT AQAYLKRQYMTIAIVGVVIFALLAYFLGILVAIGFAIGAILSGAAGFIGMNVSVRANVR FT TAQAATTSLAGGLELAFKAGAITGLLVAGLALLGVTLYFIYLIHFAGLQANSRTVVDAL FT VALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVG FT DCAGMAADLFETYAVTAVATMVLAAIFFGSATPDQLQSVMTLPLAIGGICILTSIAGTF FT FVKLGASQSIMGALYKGLIATGVLSLVGVGVVIHQLIGFGPLPGVSYTGLALFECGIVG FT LAVTGLIIWITEYYTGTDFRPVKSIAQASVTGHGTNVIQGLAISMESTALPAIVIIAGI FT LITYSLAGLFGIAIATTTMLALAGMIVALDAFGPVTDNAGGIAEMAGLPKEVRKSTDAL FT DAVGNTTKAVTKGYAIGSAGLGALVLFAAYNEDLKFFIAQKSPYFVGVAPDFSLNNPYV FT VVGLLFGGLLPYLFGAMGMTAVGRAAGAIVEEVRRQFREKPGIMKGTDKPDYGKAVDLL FT TKAAIKEMIIPSLLPVLSPIFVYFAIYAIAGGGAAGKSAAFSAVGAMLLGVIVTGLFVA FT ISMTSGGGAWDNAKKYIEDGHHGGKGSDAHKAAVTGDTVGDPYKDTAGPAVNPMIKITN FT IVALLLLAILAH" FT sig_peptide 308681..308764 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.993 atresidue 28" FT misc_feature order(308690..308758,308846..308914,308924..308992, FT 309053..309121,309164..309232,309380..309433, FT 309461..309529,309566..309634,309662..309730, FT 309854..309922,310079..310147,310208..310276, FT 310433..310501,310520..310588,310724..310792) FT /note="15 probable transmembrane helices predicted FT byTMHMM2.0" FT terminator 310829..310852 FT /note="TransTerm prediction, 98+%" FT CDS 310963..311205 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2732" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR018684" FT /db_xref="UniProtKB/TrEMBL:Q6N686" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28174.1" FT /translation="MSGVSGIKEHMEVIGADGTHVGTVDRVDGDRIKLTKKDSGEGHHK FT GHHHFIDGGLVAEVEGDKVRLSANADVAVTMEEEK" FT CDS 311530..311688 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2733" FT /product="unknown protein" FT /db_xref="UniProtKB/TrEMBL:Q6N685" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28175.1" FT /translation="MSLSSAKNYALRAAKSQDQKEAAELLSKAILELASSIEATDAKIK FT KINKDKS" FT CDS 311726..312589 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2734" FT /product="possible epoxide hydrolase-related protein" FT /function="InterPro FT IPR000073:IPR000379:IPR000639:IPR002410:IPR003089 COGs FT COG0596" FT /db_xref="GOA:Q6N684" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q6N684" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28176.1" FT /translation="MAIDTTTLEANGLRFAVDIAGQGDTVALLLHGFPEARQSWHRQVP FT FLAELGWRVAAPDLRGYGGSSQPHGKAAYTIEHLTDDVAALFMALGGKRRILIGHDWGG FT VIAWQTALRGKVQLDGLIILNAPHPDAFARELRRGWTQRRRSWYVAFFQLPWLPEWLLT FT RKGGAPLVKMFRSHSEHIPREQIEIYRRNLVQPGAATAMLNYYRANFSGLAGGAGSNPV FT ITVPTLMIWGKNDLALDIKLTEGNEQFVEDFTLRKLPRASHWVQQDAPDEVNATIAEWA FT RDKGLA" FT CDS 312785..313978 FT /codon_start=1 FT /transl_table=11 FT /gene="mexC2" FT /locus_tag="RPA2735" FT /product="putative RND multidrug efflux membrane fusion FT protein MexC precursor" FT /function="InterPro IPR006143:IPR006172 COGs COG0845" FT /db_xref="GOA:Q6N683" FT /db_xref="InterPro:IPR017964" FT /db_xref="UniProtKB/TrEMBL:Q6N683" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28177.1" FT /translation="MLKTSWTRFPARIIGALALISLVSCSEQSGPPNEATAAVPEVGVV FT TVEAKSITLTKELPGRITPMRIAEVRPRVSGIVIERTFQQGSLVEAGAPLYRIDPSPFQ FT VELDKTRAALAKAEAVLYQASRQEDRLKNLLTGQATTQAQYELAVAAERQAEAEVAAQK FT AAVDQAQLNLNLATVRAPISGRIGRALVTEGALVNTNETSQLATIQQLDPIYADFTQSV FT GELYELKRDLAEGRLKSVSPEAARVRLVLDDGSTYRHVGRLLFSDISVDPGTARVTLRG FT EFPNPDADLLPGMYVRVQIEEAIDTDGIVVPAQAVQRTAAGSAAIYVVNDEGRAMLQPV FT RAGRMLAGGALIEEGLKPGWRIVVDGFQKFSPGAAVKPVPWQSAAAEPASKPTPVKP" FT sig_peptide 312785..312874 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.997) with cleavage site probability FT 0.755 atresidue 30" FT CDS 313997..317128 FT /codon_start=1 FT /transl_table=11 FT /gene="mexD2" FT /locus_tag="RPA2736" FT /product="RND multidrug efflux transporter MexD" FT /function="InterPro IPR001036:IPR004764 COGs COG0841" FT /db_xref="GOA:Q6N682" FT /db_xref="InterPro:IPR004764" FT /db_xref="UniProtKB/TrEMBL:Q6N682" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28178.1" FT /translation="MASFFIARPIFAWVVAIFICLAGVLALPFLPVAQYPIIAPPSISI FT ATVYPGASTQNLYYGVTRLIEEELNGAAGILSYESTSDTTGEVEIVASFQPGTDIAQAT FT VDVQNRIKRIEPRLPEAVRKEGIAITEASSAILQFVTLTSSDNSLDEIGLGDVATRYVL FT PELRRLRGVGRVRLFSTERAMRIWLDPDKLLGLGLTAQDVDSAIAAQNAPVASGLLGVQ FT PTPVQQRLQNMVLVKGQLDSLEEFGDIVLRANPNGSTVRLADVARLEVGGLAYSFSTRL FT DGRPAAAVAVQLAPSGNALATSEAVKARMAELAAFFPPGVKYEVSYDVTPVIAASVKKV FT LLTLAEAVVLVFLVMFLFLQNIRYTMIPTIVVPIALLGTCAVLLGLGFSINVLTMFGMV FT LAIGILVDDAIVVVENVERIMSEEGLSPRAATEKAMEQITGAVIGITLVLMAVFVPMAF FT FPGSVGIMYQQFSAAMVVSIGFSAFLALSLTPALCATLLKPVEKGHGHATRGFFGWFNR FT RLDRATRSYGNATRWMVARGGRFMLLYVVLLAVLSFAFWRLPGGFVPIDDQGFVMVDVL FT APSDASANRTADVVRSVEKTLAATPGIDKVTFITGFSFFGQGANTAQAFVSLKDWSERS FT SNESADALIARLNPEFAKIRDADVSVLAPPPIDNLGTTSGFSFRLQDRSQRGYDALMVA FT KDELLAAAARSPVLSSVTVEGLPPAPQVRLDIDRRKAAALGVTFAAINGALSTNLGSSY FT INDFLNLGRMQRVVVQANEDKRVKPEDLLSYSVRNNAGEMVPFSSFARVAWVVGPTQVV FT GFDGYPSVRLTGNPAPGYSSGDAIAEMERLMRTLPGGFGYAWTGQSLQEKLAGSQAVFL FT LGLSILFVFLCLAALYESWSIPFAVMLAVPLGLVGSVAAAMLRGLPNDVYLTVGIVTII FT GLSAKNAILIIEFAKDLRAHGTPLVEATITAAELRFRPIIMTSLAFILGVVPLVIASGA FT SAASQQALGTGVLGGMITATVLAVFWVPVFFVVVMRFFAGRRTAPEADTGQMPA" FT sig_peptide 313997..314077 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.936) with cleavage site probability FT 0.542 atresidue 27" FT misc_feature order(314024..314092,315014..315082,315092..315160, FT 315308..315376,315419..315487,315614..315682, FT 316589..316657,316676..316744,316757..316825, FT 316886..316954,316997..317065) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(317181..317666) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2737" FT /product="unknown protein" FT /function="COGs COG2913" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N681" FT /db_xref="InterPro:IPR007450" FT /db_xref="UniProtKB/TrEMBL:Q6N681" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28179.1" FT /translation="MSISIDRRGRANALRSRFSLPRSLGLAIALTLVGAGMGGCTSEQF FT QKGYILPNGALEQIPIGASQDQVLLVMGTPSTVATLDGEVFYYISQRTERAVAFMPQKV FT IDQRVIAIYFDKNRQVRRIANYGLQDGKIFDFISRTTPTSGQEMSYLAPLFRLISFR" FT sig_peptide complement(317538..317666) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.969) with cleavage site probability FT 0.891 atresidue 43" FT misc_feature complement(317541..317606) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 317775..318311 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2738" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR014569" FT /db_xref="UniProtKB/TrEMBL:Q6N680" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28180.1" FT /translation="MIWPFNLLRPPRTPPRGTIEAIYGTIVAQSRLPAFYQEFGVADTV FT NGRFEMLVVHLWLVLRRIRSIQDASTFAQALFDYFCSDLDANLRELGVGDLSVPKRMQA FT FGEAFYGRSAAYDLALTEGREDLELALNRNVLDGADIENARKLAVYVGQVIAALDAVPP FT AKLRSGELPFPQPTA" FT CDS 318329..318895 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2739" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR003772" FT /db_xref="UniProtKB/TrEMBL:Q6N679" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE28181.1" FT /translation="MASENNPWSVPVVVMQIPETGLHRHITASTAECEAISALGDLRGV FT SEATASFDLKPFSDGRVHLTGRVRAKVTQTCVVTLDPVDNVIDEQVDLTFLPPEQIREL FT ADSVDDDGEPDPSDPPEAIERGIIDIGRVATDALYLGLDPYPRKPDAVFEPIVDRADPD FT MNPFAALKALQQPADSAPSRKPKKG" FT terminator 319063..319075 FT /note="TransTerm prediction, 98+%" FT CDS 319136..320197 FT /codon_start=1 FT /transl_table=11 FT /gene="plsX" FT /locus_tag="RPA2740" FT /product="fatty acid/phospholipid synthesis protein" FT /function="InterPro IPR003664 COGs COG0416" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N678" FT /db_xref="InterPro:IPR012281" FT /db_xref="UniProtKB/Swiss-Prot:Q6N678" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28182.1" FT /translation="MPQKVRIALDAMGGDFGPSVVIPGAAISLGRHPDVEFLLYGDAKL FT IEKELAAHPALRKASRVVHTDVAVAMHDKPSVALRRGRYKSSMWQAIDAVKKTEADVTV FT SAGNTGALMAMARFCLRTLPGIDRPAIAATWPTMRGDSVVLDLGASIGGDAQHLKALAI FT MGAAMASVLFDLERPTVGLLNIGVEEIKGGEEIREAAELLRAMNSQRFDFIGFVEGDGI FT GKGAADVIVSEGFAGNIALKAAEGTARQLAEYLRAAMSRTWRSKIGYLFARDAFKALKD FT KMDPNKSNGGVFLGLNGIVVKSHGGTNAEGFAYAVDVGYDMVRYDLLTKINQTLNRDAG FT ALVATPSAQEVVS" FT CDS 320194..321171 FT /codon_start=1 FT /transl_table=11 FT /gene="fabH" FT /locus_tag="RPA2741" FT /product="3-oxoacyl-acyl carrier protein synthase III" FT /function="InterPro IPR004655 COGs COG0332" FT /EC_number="2.3.1.41" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N677" FT /db_xref="InterPro:IPR016038" FT /db_xref="UniProtKB/TrEMBL:Q6N677" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28183.1" FT /translation="MTVIRSVVLGCGAYLPERVLTNEELARTVDTSDEWIVQRTGIRER FT HIAADGEFTSHLATKAAQAALDNAGITADQIDLIVLATSTPDHTFPATAVQVQAALGMT FT HGVAFDLQAVCSGFVFAVATADNYLRAGSAKRALVIGAETFSRILDWNDRGTCVLFGDG FT AGAIVLEAQEGWSTSADRGVLTTHLRSDGRHKHKLYVDGGPSSTQTVGHLRMEGREVFK FT HAVGMITGVIVDAFNASGTSADNVDWFVPHQANKRIIDASAQKLHIAPEKVVMTVDRHG FT NTSAASIPLALCTAVADGRIQKGHLVLLEAMGGGFTWGAALLRW" FT CDS 321305..321661 FT /codon_start=1 FT /transl_table=11 FT /gene="himA" FT /locus_tag="RPA2742" FT /product="integration host factor alpha subunit" FT /function="InterPro IPR000119:IPR005684 COGs COG0776" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N676" FT /db_xref="InterPro:IPR005684" FT /db_xref="UniProtKB/Swiss-Prot:Q6N676" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28184.1" FT /translation="MAGRTVTRVDLCEAVYQKVGLSRTESSAFVELVLKEITDCLERGE FT TVKLSSFGSFLVRQKGQRIGRNPKTGTEVPISPRRVMVFKPSAILKQRINANGAMPMST FT EESDENTAQSASGG" FT CDS 321676..322428 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA2743" FT /product="bacterial regulatory protein, MerR family" FT /function="InterPro IPR000551 COGs COG0789" FT /db_xref="GOA:Q6N675" FT /db_xref="InterPro:IPR000551" FT /db_xref="UniProtKB/TrEMBL:Q6N675" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE28185.1" FT /translation="MDKAPDAFRTISEVAAELDIPQHVLRFWETRFTQIKPMKRSGGRR FT YYRPDDVDLLKGIRRLLYGEGYTIRGVQRILKEHGIKSVQRLADAEVHASFGAVEAAIT FT RSVTEEEEFEPVPGGIDADDDDYDGEDEGLDLHTAMAEPEHRGAPAAAPRRNITAEPRH FT APHFDGHEDDGHDDDFAVEPAPVIAASGRAPRFDLPPLEFPAAKAPPAPPPVDLGPLRA FT VLTDLIACRELLDAAIKDGRGQADSPEQ" FT tRNA 322747..322824 FT |