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EBI DbfetchID BX572598; SV 1; linear; genomic DNA; STD; PRO; 346879 BP. XX AC BX572598; XX DT 09-DEC-2003 (Rel. 78, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 XX KW complete genomes. XX OS Rhodopseudomonas palustris CGA009 OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. XX RN [1] RP 1-346879 RX DOI; 10.1038/nbt923 RX PUBMED; 14704707. RA Larimer F.W., Chain P., Hauser L., Lamerdin J., Malfatti S., Do L., RA Land M.L., Pelletier D.A., Beatty T.J., Lang A.S., Tabita F.R., RA Gibson J.L., Hanson T.E., Torres y Torres J., Peres C., Harrison F.H., RA Gibson J., Harwood C.S.; RT "Complete genome sequence of the metabolically versatile photosynthetic RT bacterium Rhodopseudomonas palustris"; RL Nature Biotech 22(1):55-61(2004). XX RN [2] RP 1-346879 RG Rhodopseudomonas genome consortium RA Larimer F.W., Harwood C.S.; RT ; RL Submitted (24-JUL-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Rhodopseudomonas genome consortium, the DOE RL Joint Genome Institute, Production Genomics Facility, 2800 Mitchell Drive, RL Walnut Creek, CA 94598, USA, and the Genome Analysis Group, Oak Ridge RL National Laboratory, 1060 Commerce Park Drive, Oak Ridge, TN 37831, USA; RL larimerfw@ornl.gov. XX DR EMBL-CON; BX571963. DR RFAM; RF00005; tRNA. XX FH Key Location/Qualifiers FH FT source 1..346879 FT /organism="Rhodopseudomonas palustris CGA009" FT /strain="CGA009" FT /mol_type="genomic DNA" FT /db_xref="taxon:258594" FT CDS 127..1005 FT /codon_start=1 FT /transl_table=11 FT /gene="dapA1" FT /locus_tag="RPA1571" FT /product="putative dihydrodipicolinate synthetase" FT /function="InterPro IPR002220 COGs COG0329" FT /EC_number="4.2.1.52" FT /db_xref="GOA:Q6N9H8" FT /db_xref="InterPro:IPR002220" FT /db_xref="PDB:3EB2" FT /db_xref="UniProtKB/TrEMBL:Q6N9H8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27012.1" FT /translation="MMADFHGVFPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPL FT GSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGIL FT AILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYI FT KDASTNTGRLLSIINRCGDALQVFSASAHIPAAVMLIGGVGWMAGPACIAPRQSVALYE FT LCKAQRWDEALMLQRKLWRVNEAFAKFNLAACIKAGLALQGYDVGDPIPPQAALTAEER FT KAVEKVLAEIA" FT CDS 1230..3560 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1572" FT /product="putative carbon-monoxide dehydrogenase large FT subunit" FT /function="InterPro IPR000674 COGs COG1529" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9H7" FT /db_xref="InterPro:IPR008274" FT /db_xref="UniProtKB/TrEMBL:Q6N9H7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27013.1" FT /translation="MNILPGSMRFGAGQPVKRLEDQRLLTGHGGYLDDKAAEGALWLVV FT MRSPHAHADIVSIDTEAAKGMPGVEAVLTGADLIADDVGTIPTLPIFKRPDGSPMALPL FT RRLLAHEKVRFVGEPVAAVVATSQLAAQAAMEAIAVEYHELPAVTDPTAAIQPGAPAVW FT AETPDNIVAAMSYGDAAKVDAAFASAAHTVSLDLVSQRLIPSAMEPRSTIAEIEKKTGR FT LILHTQSQTPGQTRDALAEAILKRPKESIQVLVGDIGGGFGQKTGVYPEDALVAYAAVK FT LNRKIRWRGERTDEFIGGTHGRDLTSTASFALDSKGKVLAYRVTSIGGTGAYLAGAGVI FT IPLVLGPFVQTGVYHLPVVHFDIKAVMTHTAPVGAYRGAGRPEAVYIVERLMDAAARKL FT NMDPRAIRKINYIKPSQLPYTNAVGQVYDSGAFAHMMDRAAELSDWDGFKARKKAAQKK FT GLLYGRGVTSYIEWTGGRAHTENVKLHATAEGRVVLHSGTQAMGQGLETTYTQMIAAAL FT EIPLDKIDVVQGNTDLAIGFGSVGSRSLFVGGTAVAVSSAEMIAKAREKAANILEASIE FT DIEYSGGMLTIAGTDRKISLFEIAAKEKGTRLSVDSTGEVDGPSWPNGAHICEVEVDPE FT TGVSRVVRYTTVDDVGNAVNPMLVAGQIHGGVAQGVGQALYENAAYNDDGQLLTASYLD FT YCIPRADNLPPINVTLDPSAPCKTNPLGAKGCGESGAIGGPPCVVHGVLDALAPLGVTT FT LNTPLTPEKVWRAIQDAKSAQAA" FT CDS 3638..4252 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1573" FT /product="LemA family" FT /function="COGs COG1704" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR007156" FT /db_xref="UniProtKB/TrEMBL:Q6N9H6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27014.1" FT /translation="MRKFLTVLAALAALSLSNCGYNTIQSEDQEVKSTWSEVVNQYQRR FT ADLVPNLVNSVKGFAQQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKFQQAQGELS FT SALSRLLIVTENYPQLKSDELFKNLMAQLEGTENRITVARNRYIKAVAAYNVTVRSVPT FT NFTAMMFGYKEKPNFTVENEKAISTAPKVDFTPAPAPAPAK" FT sig_peptide 3638..3700 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.396 atresidue 21" FT CDS 4257..5180 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1574" FT /product="DUF477" FT /function="COGs COG1512" FT /db_xref="InterPro:IPR007621" FT /db_xref="UniProtKB/TrEMBL:Q6N9H5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27015.1" FT /translation="MTAATIRAVRAGWLALLLCVVALALAPFARADVAVPVLTGRVVDQ FT TGTLSADAVARLDQKLKAFEARKGSQIAVLIVPTTQPEAIEQFSIRVAEAWKIGRKKID FT DGAILLVAKNDRKLRIEVGYGLEGALPDVTAKRIIDEIITPKFKTGDFDGGIEAGVDRM FT IGVIDGEPLPTPQPQHEWAAPESMDELTGWAIPLLFGTLVLNGFLKAALGRVAASGLTG FT IIVGAVAMLFGLVWYIALVAGFAAFLLALVIDLFGGPTISSGRRGGSGGTWTGGSSGSS FT WSSGSSDSGFSGGGGSFGGGGASGSW" FT sig_peptide 4257..4352 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.947 atresidue 32" FT misc_feature order(4290..4358,4824..4880,4899..4952,4962..5030) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 5194..5691 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1575" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007621" FT /db_xref="UniProtKB/TrEMBL:Q6N9H4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27016.1" FT /translation="MGIRRIGKHLFTSRGAVHRAFSPDAFDAIERAIKASETRHVGQIR FT FVVEGALDGAPLFRDQPVRERALDIFSQLRIWDTEHNNGVLIYLLLADRNVEIIADRGI FT DGRVGADTWEAICREMEAEFREGRFEQGVLRGIDRITAHLAEHFPRSGPSPNEIPDAPV FT VV" FT CDS complement(5773..6384) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1576" FT /product="putative glutathione S-transferase" FT /function="InterPro IPR004045:IPR004046 COGs COG0625" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9H3" FT /db_xref="InterPro:IPR010987" FT /db_xref="UniProtKB/TrEMBL:Q6N9H3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27017.1" FT /translation="MKLYDSIGPNPRLVRMFIAEKGLTIPTQTLDIRAGENRKPEHLAR FT NPHGQTPTLELDNGSFLAEVTAICEYLEEKHPQPPLIGTTPEERAECRMWTRRIDLYIC FT EPLTNGFRFAEGLKMFQDRVVCVPEAAPGLKKIAADRIRWMNEQMKGKEYVCGARLTLA FT DLLLYGWLDFGAQVGQPLAPANTTIAEWFKRIAARPSAKA" FT CDS 6593..7564 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1577" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9H2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27018.1" FT /translation="MDEHRNEPIGEQQTGAAAATDGAQANAGTPEASSASAPQGTPANT FT PANAGAAKPDEAKPAGKSEIEKSDRVSRPRPGTVTIMAPSPREDLYRHWDDEIEVEAPD FT EASQSAVHRFGVRKLAAVAAAVILAAIAGAVGGALATASLSHRSDAETTAASAQVKTLD FT AQVAQLQIELSALKADLDHAAKQSTAQLGKTADRIEKLEKAQAEPVAKIAKLSETVEKL FT RTAQVQPPAAPAPANVAAVPAKDVTGSITPKAEAAKPGRLPTVEGWVLRDVYDGGAVVE FT GRSGTYEVYAGDPIPGVGRVDAIRRQDGRWVVVTSRGLIVAR" FT misc_feature 6947..7015 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT terminator 7593..7621 FT /note="TransTerm prediction, 98+%" FT CDS complement(7721..8494) FT /codon_start=1 FT /transl_table=11 FT /gene="fpr" FT /locus_tag="RPA1578" FT /product="ferredoxin--NADP+ reductase" FT /function="InterPro IPR001433:IPR001834 COGs COG1018" FT /EC_number="1.18.1.2" FT /db_xref="GOA:Q6N9H1" FT /db_xref="HSSP:1A8P" FT /db_xref="InterPro:IPR008333" FT /db_xref="UniProtKB/TrEMBL:Q6N9H1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27019.1" FT /translation="MSAFQTETVLSVRHWTDSLFSFTATRDPGFRFQSGQFAMIGLEVD FT GRPLMRAYSMASANHEEELEFFSIKVPNGPLTSRLQQIKEGDQILVGRKATGTLIAGNL FT IPGKRLLLLSTGTGLAPFASLIKDPEIYDNYESIVLVHGCRQIPELAYGEQLVERLRDH FT EFLGDLIRDKLHYYPTVTREPFRNRGRVTDLIASGQLFSDLGQSGLDRESDRVMLCGNP FT AMLAELPAMLSERGFREGNHSEPGHFVVEKAFVER" FT CDS complement(8811..10019) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1579" FT /product="L-carnitine dehydratase/bile acid-inducible FT protein F" FT /function="InterPro IPR003673 COGs COG1804" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9H0" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q6N9H0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27020.1" FT /translation="MDENGIFSGLKVLDCASFIAAPAAATVLSDFGADVIKIEPPGAGD FT PYRNLPNLPGYPISDHNYAWMLEARNKRSLALDLAKPEGKEVLRKLVAEADVFITNFPP FT PVRARLGVAYADLAPLNERLIYASFTGYGERGEEANKPGFDSNAWWARSGMMDLVRADE FT DSTPARSVAGMGDHPCAMSLFGAIVTALYKRERTGKGSEVKSNLMANGLWSTSVLAQAK FT LVGAEFQPRRTRERALNAVANHYRCRDGRWLILSLLNEEKQWPTLTKCLGREDLTDDPR FT FATKADRHARSIELIGIFDEIFATRDLAEWRKALDGTGLVFGVVGILDDITTDKQLIEN FT EVLVPFENDTTLTINSPIWIEGSTKTRPRKPPGVGEHSDEVLRNAGYDDAAIKALRASG FT AVG" FT CDS complement(10184..13192) FT /codon_start=1 FT /transl_table=11 FT /gene="putA" FT /locus_tag="RPA1580" FT /product="proline dehydrogenase PutA" FT /function="InterPro IPR002086:IPR002872:IPR005933 COGs FT COG1012" FT /EC_number="1.5.1.12" FT /db_xref="GOA:Q6N9G9" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q6N9G9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27021.1" FT /translation="MPSDPPLAEFTAAYAPDDAALAAELLTTATLTPDREAQIDAIATD FT LITAIRGSEHGLRGVEAMLREFALSTKEGLALMVLAEALLRVPDAATADAFIEDKLGQG FT DFAHHRIKSDAVLVNASAWALGLSARLVHAGETPQGTLAALTRRIGAPAVRAATRQAMR FT LIGNHFVLGETIDAALARAQPYAREGSRYSYDMLGEGARTAADAERYYQSYADAITAIG FT RRAGNAALPARPGISVKLSALHPRFEAISRDRVMRELTPRLLELAQLAKSHDLAFTVDA FT EEADRLELSLEVFAACFADPSLKGWDGYGLAVQAYQKRAATVIDHVAELARAFDRRMML FT RLVKGAYWDTEIKRTQERGLADYPVFTRKAMTDLNYLHCARKLLALRPLLFPQFASHNA FT LTVATILAEAGDGDGYEFQRLHGMGEALYGRLLADHPQAVCRIYAPVGGHRDLLAYLVR FT RLLENGANSSFVAQAGDDSVPITELLARPATLIGHPENARNSAIPLPRDLYQPQRINSR FT GIEFGDRSALAALLGDIEGARRPLPTVASTSPEQAAATVTAARKGFESWSRTSGDHRAA FT ILQRAGDLLEQRRGELIALLQDEGGKTLDDGVAEVREAVDYCRYYASEGRRLFGEPQAL FT PGPTGERNTLALRGRGVFVAISPWNFPLAIFLGQITAGLMAGNAVVAKPAEQTPVIAEV FT AVRLLHEAGVPPAALHLVQGDGRIGAALVEQRDIAGVVFTGSTEVARAINRTLAAKDGP FT IVPLIAETGGINAMIVDATALPEQVADDVIASAFRSAGQRCSALRLLCVQDDVADRVIA FT MIAGAARELTIGDPRDPATHVGPVIDAEAKTRLDTHIATMKRQAQLHFAGTAPASGNFV FT APHIFELNRASELTEEVFGPILHVVRYKAAQFDDLLDDIATTGYALTLGVQSRIDDTIA FT RVIARLPTGNVYVNRNIIGAVVGVQPFGGSGLSGTGPKAGGPHYLPRFALEQTVSINTA FT AAGGNAALLTGSE" FT CDS 13256..13984 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1581" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9G8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27022.1" FT /translation="MPSRLPYWHGRGLTLASPPPQGRLGAGMRVTRGKSNARRFGALAA FT VALAAAWFGAPAGAAELSSQVSYLYSSVSIFPPSAKGMTVCYGFVCRRRYELAFSAGDR FT AALSRIMASGKASAAAERAAVQKAVVWLDRRLGPVLGTDKRIARADFRYFDDKHNFDCW FT DTTRNTTSLLLVMQEWGLFKYHSVGDPKYRGNVLVLQTPHNTAVLTERAAGTQWVVDMW FT TRAYAQTPEVMPVDQWVKLD" FT sig_peptide 13256..13435 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.935) with cleavage site probability FT 0.928 atresidue 60" FT CDS complement(14009..15790) FT /codon_start=1 FT /transl_table=11 FT /gene="cyaA" FT /locus_tag="RPA1582" FT /product="Ferredoxin:Adenylate/Guanylate cyclase" FT /function="InterPro IPR001041:IPR001054 COGs COG2114" FT /EC_number="4.6.1.1" FT /db_xref="GOA:Q6N9G7" FT /db_xref="InterPro:IPR001041" FT /db_xref="UniProtKB/TrEMBL:Q6N9G7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27023.1" FT /translation="MRSLMATRAKPNKKQNASARGKKPAWLGGIGLRQVRMFCGLVLFT FT YLLSHFLNHALGNISPEALHAGVLWHLEIWQFLPVAILFYGSVTVHAGLGLWALYQRRQ FT FRWKTLEPLQLVLGLSVPLMIYSHVIVMRLGNVLYDQDRLYPQVLYNYFVASPSYRAWL FT MVAVMLIAWTHGCIGLYVWLRIKPAFRRAMPWLLAAAVLIPTLALLGFYQGGRTVAREA FT ASPQWQANNLAPANLGTPEQQQTLEAIGNGFLIFYLGLIALALIARAVRAIIERRGGMV FT RLTYDGERSIRVPKGLTVLEATQRHNIPHASACGGRARCSTCRIRVLGDPATLPPPSPR FT EAFVLASIGTGDDPSIRLACQLKPTQDLTFLPVFPPRNVAAARKAARAARIGEERYLVS FT MFVDMRGSTKLAESRLPFDTVFIVNRFLGAVSRSVIACGGQPNQFVGDGMLALFGLAET FT PREACRNAVRAAAAIGAAIDELNNFLGHDLPEPIRFGIGIHSGEVVVGEIGYRDHMVFT FT ALGDSVNVASRLQDMTKSLGCETLLSDELRATAGLSEQALPTLELEIRGRTEPMLVCVV FT ERAGDLVAVLNEDLVLA" FT misc_feature complement(order(14981..15046,15149..15205,15242..15307, FT 15389..15454,15494..15559,15620..15676)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(15983..17092) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1583" FT /product="conserved hypothetical protein" FT /function="InterPro IPR006507" FT /db_xref="GOA:Q6N9G6" FT /db_xref="InterPro:IPR006507" FT /db_xref="UniProtKB/Swiss-Prot:Q6N9G6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27024.1" FT /translation="MTERVPPRRPATFKLSDPSVVLIDSDDGGGSYTAKPSAKADARPA FT ASAAGAAPPPPPPRARVELAREAEPPISAPKAPKSVINPKKGFRWGTVFWSAATGLVSL FT AFWLWISKLVEDLFAQSQTLGTIGMVLALLAGGSLAIIIGREAFGLIRLARIEQLHARA FT ARVLETDNSAEARAIIRELLKFEHPNPQLAHGRATLQKHIDDIIDGADLIRLAERELMA FT QLDLEAKVLISKAAQRVSLVTAISPKALIDVLFVAIAATRLIGQLARLYGGRPGALGMF FT KLMRQTVSHLAITGGIALSDSVMQSVLGHGLASRLSAKLGEGVVNGMLTARLGLAAMDL FT TRPLPFDALPRPQLGDLVKDLMKKREKDE" FT misc_feature complement(order(16310..16375,16661..16717,16763..16828)) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(17089..18558) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1584" FT /product="conserved hypothetical protein" FT /function="InterPro IPR001687 COGs COG3106" FT /db_xref="InterPro:IPR007413" FT /db_xref="UniProtKB/TrEMBL:Q6N9G5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27025.1" FT /translation="MAFNFSNLLEDAWLSARALKDYSENLFNPTIRLGVTGLSRAGKTV FT FITALVHGLCRGGRFPIFESMSTGRIATARLAPQPDDAVPRFAYENFLATLIEQRQWPS FT STVDISELRLVIDYQRKNGSETTLTLDIVDYPGEWLLDLPLLGKSYERWAAESLALSRQ FT DPRARVAREWHAHLATLDPNGRENEQETLKAARLFTAYLRACRDEQFAMSLLPPGRFLM FT PGNLAGSPALTFAPLDVPDGGIAPDGSLWAMMRRRFEAYKDAVVRPFFRDHFARLDRQI FT VLADALSAFNAGPEALQDLEAALAGILECFRVGRSTLLSSVFRPRIDRILFAATKADHL FT HHSSHDRLEAILRKLVEQAMKRAEFAGAKVDVVAMAAVRATREAQVQRGRDRLPSIVGT FT PIAGEMAEGEVFDGETEVATFPGDLPTNLQGLFRGEDTFRGLAAGSHQEADFRFLRFRP FT PRLDSHDPDGPALPHIRLDRALQFLIGDRLQ" FT CDS 18802..19497 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1585" FT /product="putative hemmolysin III, HlyIII family" FT /function="InterPro IPR004254 COGs COG1272" FT /db_xref="GOA:Q6N9G4" FT /db_xref="InterPro:IPR005744" FT /db_xref="UniProtKB/TrEMBL:Q6N9G4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27026.1" FT /translation="MTIFRLKQIVSHARIDAKGAVHWNYDRAELIADGVVHVLGLVAGL FT IAATALVTLTGVFASTPTIVSVSVYVAGLLAMLGLSAAYNLWPVSPRKWLLRRFDHSAI FT YILIAATYTPIISQIKDQVFGLALLAGVWGVAVVGIVLKLFKPGKFDKLSVGLYLALGW FT SGIIAYDQVVETLPTTAMWFLAIGGLLYTLGVIFHAWRRLRFQNAIWHAFVLVAAGCHY FT VAVMDLVLA" FT misc_feature order(18904..18972,19000..19068,19105..19158,19168..19236, FT 19255..19308,19336..19404,19423..19491) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 19557..20357 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1586" FT /product="putative short-chain dehydrogenase/reductase" FT /function="InterPro IPR002198:IPR002347 COGs COG1028" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9G3" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N9G3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27027.1" FT /translation="MQIAGKVVVVTGGGNGIGQALCEAFHKAGAAKVVVADLDQARAEA FT VAASIGGAAFKCDVANEADIKHVIEETERQFGPIDLFCSNAGIGGGFDPMAENAGGASD FT EPFMKSWMIHVMAHVYAARHLVPRYRARGGGYFLNTISAAGLLSQVGSPAYSATKHGAV FT GFAESLAIAHKAHNIRVSILCPQGVDTNMLRSIPKGPQSADGDLTAEQVAKDALQGIEQ FT ETFLILPHPQVIDYMRKKTENYDRWIGGMAKIQAKLRETFGGKA" FT CDS 20555..20839 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1587" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9G2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27028.1" FT /translation="MSDHSHRRPSWVARSLAAIAITSIYCFSFVGAAAVVSGVTSSEAH FT AQRGRGRGRGYSGRGYGGRGRGRGWDRGRGRGSYGGRCVVNAAGVRICL" FT sig_peptide 20555..20656 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.992) with cleavage site probability FT 0.379 atresidue 34" FT misc_feature 20597..20665 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(20843..21925) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1588" FT /product="putative L-allo-threonine aldolase" FT /function="COGs COG2008" FT /EC_number="4.1.2.-" FT /db_xref="GOA:Q6N9G1" FT /db_xref="InterPro:IPR015422" FT /db_xref="UniProtKB/TrEMBL:Q6N9G1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27029.1" FT /translation="MLASGMAYIPSLPDPNAPPVRINLLSDTQTRPTPAMREAMALAEV FT GDEQTGDDPTTNLLQERVAALLGKQAAVFLPSGTMCNVTTTLATCRPGDEIIAHRTAHI FT LSREGGAHAALGGFQITGLDGDDGQFSLETFRAALHPKTRYEPPQVMVSAEQTANIGGG FT TIWPQATLDAVAAAGKDAGLWTHIDGARLMNAVVATGISAKAMTAGWDSAWIDFSKGLG FT APVGAVLAGPRAFIDEVWRWKQRLGGAMRQSGVIAAACLYALDHHVDRLADDHANARRL FT ASGLAQIDGIEVQTPQTNLVFFKPDRTGVSGADMVAQLRRRGVVLAMMEGRIRACTHLD FT VSADMIEQTLDHVREIVRAA" FT terminator complement(22180..22199) FT /note="TransTerm prediction, 98+%" FT CDS complement(22238..22855) FT /codon_start=1 FT /transl_table=11 FT /gene="rpsD" FT /locus_tag="RPA1589" FT /product="30S ribosomal protein S4" FT /function="InterPro IPR000977:IPR001912:IPR002942:IPR005709 FT COGs COG0522" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9G0" FT /db_xref="InterPro:IPR002942" FT /db_xref="UniProtKB/Swiss-Prot:Q6N9G0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27030.1" FT /translation="MTKRAEAKYKIDRRMGQNIWGRPKSPVNRREYGPGQHGQRRKGKL FT SDFGVQLRAKQKLKGYYANISERQFHAIYVEATRLKGDSGENLIGLLERRLDAVVYRAK FT FVSTMFAARQFINHGHIKVNGKRVNIPSYKVRVGDVIEVKEASKQLAFVLEASQLAERD FT VPDYIEVDHNKMTAKFARIPALSDVPFAVQMEPHLIVEFYSR" FT CDS complement(23045..23821) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1590" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9F9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27031.1" FT /translation="MRGRTRRISAPRRLIADLMHASQAVPLISYRRTLHLAPLARARAA FT AASPPGFAAIFAKAFSLVARDEPLLRTLYVDFPWPHFFELPKSVGMIAVARRIDGEDCV FT LMQKVTAADTLPLTEVDAIIRGASTAPIETVPMFRKLLRISRMPWPLRRIAWWAGMSLD FT RPRANFFGSFGVSSVSAFGPGDLCPVSPGPYILSYDRLTDDGRLEVIVRFDHRVIDAAP FT IARLTTRLEQVLNTLIAAEIEGLDRPARALRAAAGP" FT CDS complement(23821..24216) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1591" FT /product="conserved unknown protein" FT /function="InterPro IPR007113 COGs COG0662" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="HSSP:1O4T" FT /db_xref="InterPro:IPR013096" FT /db_xref="UniProtKB/TrEMBL:Q6N9F8" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27032.1" FT /translation="MTIKTLRHILVACAVVAAAGAAVAQQSGIKRTPLQKIEFPDGYVT FT VSGLAELPPGGNIGRHTHPGIETGYLLEGEAVMSIDGEPDKHLKAGDSYVIQAGVVHDA FT KVHGDKGAKVMAVWVVDKTKPLATPAK" FT misc_feature complement(24130..24195) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(24142..24216) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.989 atresidue 25" FT CDS complement(24270..25064) FT /codon_start=1 FT /transl_table=11 FT /gene="murI" FT /locus_tag="RPA1592" FT /product="putative glutamate racemase" FT /function="InterPro IPR001920 COGs COG0796" FT /EC_number="5.1.1.3" FT /db_xref="GOA:Q6N9F7" FT /db_xref="HSSP:1B74" FT /db_xref="InterPro:IPR018187" FT /db_xref="UniProtKB/TrEMBL:Q6N9F7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27033.1" FT /translation="MTSLPTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQ FT RSEEAVIGRVVPLMGELIAAHAPDLVVIACNTASTMTLAPLRARYRVPFVGTVPAIKPA FT CAGSRTKRVSVLGTSATVRLEYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTD FT AAIRAEIAPCFVEADAKRGRTDAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRV FT VTLLGPATGHAPTPGAEMIFTSGRHPRASAALAPYFGGRIPA" FT CDS complement(25147..25635) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1593" FT /product="Thioesterase superfamily" FT /function="InterPro IPR006683" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q6N9F6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27034.1" FT /translation="MTTTAEPTRPSRPDLFTATEGEFAGWRTWTRDTFESHNGPFWHRL FT DDDGRVRCAFRVEKKHLNGMKAVHGGCFMTFADYCLFAIAVRELQGPGVTVAFGAEFLD FT AAFEGELIEATGEVTRAGKSLIFVRGILKSGERPLFTFSGTIKRVKRKVPPTEVADSH" FT CDS 25790..27154 FT /codon_start=1 FT /transl_table=11 FT /gene="trpB-1" FT /locus_tag="RPA1594" FT /product="putative tryptophan synthase beta chain" FT /function="InterPro IPR001926:IPR006316:IPR006653 COGs FT COG1350" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9F5" FT /db_xref="InterPro:IPR006316" FT /db_xref="UniProtKB/TrEMBL:Q6N9F5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27035.1" FT /translation="MSDQIKYVLDEENIPKSWYNLNADFPTPMPPVLHPGTHQPVGPSD FT LEPLFPMELILQEVATERYIEIPEPVRDVFRMWRPAPLIRARRLEQALGTPAKIYFKYE FT GVSPAGSHKPNTAVPQAWYNKQAGIKKLSTETGAGQWGSSLAFAGSLFGLDVLVFQVRV FT SYDQKPYRRALMETYGARCIASPSNETDSGRAILEKNPNSPGSLGIAISEAVEVAAKNP FT DIKYALGSVLNHVMLHQTIIGEEAIKQFEMAGDDPDVVIGCAGGGSNFAGLAFPFLGLQ FT LRGGRKRRIIAVEPAACPTLTRGTYAYDFGDTAHLTPLVKMHTLGSTFMPPGFHAGGLR FT YHGMSGMVSHAYELGLIEARAYKQVGCFEAGVQFARTEGIVPAPESTHAVRCAIDEALR FT CKEEGKSETILFNLSGHGHFDMQAYINYFEGKLVDQDYDEADLATALAGLPAVAA" FT CDS 27492..28442 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1595" FT /product="conserved unknown protein" FT /function="InterPro IPR000157" FT /db_xref="GOA:Q6N9F4" FT /db_xref="InterPro:IPR000157" FT /db_xref="UniProtKB/TrEMBL:Q6N9F4" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27036.1" FT /translation="MPKVFFSYSHADEALRDQIETQLALLKRQGIIDVWHDRRIGAGRE FT FAREIDQHVESDEIILLLVSADFLASDYCYEKEMLRALTRHDAGEAVVIPVILRACDWH FT GAPFGKLNAVPRDGKPITQFADRDAAMLEVARAVRSVAERFGSVASPKKTAQDVARSSL FT QGALSPRSSNLRLAKTFNDKDKDEFRTEGFEYLSRFFENSIAELSKRNPGIEATFRKID FT ANRFVAKAYRNGRSATSCTVFMGGMMGNGISYLARETTESNSHNEMLTVEADDQALYFQ FT SFGMAVGRGNRQKLSYEGAAELYWTMFIEPLQQGK" FT CDS 28834..29202 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1596" FT /product="possible tryptophan synthase beta chain" FT /function="COGs COG1350" FT /EC_number="4.2.1.20" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9F3" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/TrEMBL:Q6N9F3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27037.1" FT /translation="MASGYWSRRRKAHSEGGRYCEVRLIEARAYKQVGCFEAGVQFART FT EGIVPAPESTHAVRCAIDEALRCKEEGKSETILFNLSGHGHFDMQAYINYFEGKLVDQD FT YDEADLATALAGLPAVAA" FT CDS 29598..31808 FT /codon_start=1 FT /transl_table=11 FT /gene="purQ" FT /locus_tag="RPA1597" FT /product="phosphoribosylformylglycinamide synthetase" FT /function="InterPro IPR000728 COGs COG0046" FT /EC_number="6.3.5.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9F2" FT /db_xref="InterPro:IPR010074" FT /db_xref="UniProtKB/Swiss-Prot:Q6N9F2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27038.1" FT /translation="MSAPEPKITPELIASHGLKPDEYQRILDLIGREPTFTELGIFSAM FT WNEHCSYKSSRIHLKGLPTKAPWVLQGPGENAGVIDIGDNQAVVFKMESHNHPSYIEPY FT QGATTGVGGILRDVFTMGARPIACLNALSFGDPSHPKTRHLVSGVVAGVGGYGNSFGVP FT TVGGQTRFHTRYDGNILVNAMAVGLADADKIFLAAASGVGMPIVYLGSKTGRDGMGGAT FT MASAEFDEGSDEKRPTVQVGDPFAEKLLLEACLEIMAKDCVIAIQDMGAAGLTCSAVEM FT GAKGDLGVELDLDAVPTRETGMTAYEMMLSESQERMLMVLKPEKEKEAEEIFKKWGLDF FT AIVGYTTPTKRFVVKHGGQVKADLPIKELGDEAPLYDRPWVESERLPVIHARDINAPMG FT AAEALEKLLATPDLCSKRWVWEQYDHVIGGNTVQRPGGDAAVVRIEDGPKGLALTVDVT FT PRYCEADPFEGGKQAVAEAYRNITAVGGKPLAITDNLNFGNPERPEIMGQLVGCLKGIS FT EACIALDSPIVSGNVSLYNETSGRGILPTPSIGGVGVLDDFTKSATLAFKAEGEAILLI FT GETKGWLGQSVYLREICGREEGAPPPVDLAVEKRHGDVVRGMIHAGTATAVHDVSDGGL FT LVAIAEMAIAGNIGASLDAPPGETVSHAWWFGEDQARYVVTVKEADLLAVKTKLKTIGV FT PCTQIGVTGGHALKIEGERTVDLKALRHAHEHWLPDYMGGKN" FT CDS complement(32054..33235) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1598" FT /product="Peptidylprolyl isomerase, FT FKBP-type:Acyltransferase 3 family" FT /function="InterPro IPR001179:IPR002656" FT /db_xref="GOA:Q6N9F1" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:Q6N9F1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27039.1" FT /translation="MTVTYPTTGGMTANAASHVRDLSLDRTRTFLTILVLIHHSVIPYT FT YFGHTDPSSFIGFDCVVLATDSFFMAMFFMLSGLFLWPSLDHRPKFGSLARDRLIRLGI FT PFVIAAFTVIPIAYYALALRADPTESFAKFYENMITVGPWPSGPLWFLWVLFIFSVIGG FT ALYRISRHSLDPINHLAKLGYKSPALFIGTVFLVTAILYVPSRLYYTSTYWFEWGPFAV FT QASRVLLYTAYFFIGAGIGACHPEQSVLGAGGKLAQQWWIWLLVALVPYLGMWGLIGIK FT RGILDNPDDLPMWYEASYSVALTAFSAAIIFAILAVFLRFRRGGWSLLDPLQHDAYGIF FT LVHYAYMLWLQYWLYDYDLPAIVKAAIVFTLGLLLSWATTYLLRKIPGAYRVL" FT misc_feature complement(order(32084..32149,32171..32227,32273..32338, FT 32399..32455,32609..32674,32738..32803,32864..32929, FT 32993..33049,33095..33145)) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(33310..33672) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1599" FT /product="conserved hypothetical protein" FT /function="COGs COG2343" FT /db_xref="InterPro:IPR007361" FT /db_xref="UniProtKB/TrEMBL:Q6N9F0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27040.1" FT /translation="MKLPGPDHPISITANPNGVRISADGKVIAETRRALTLQEASYPPV FT QYIPREDADMRLLEKTARVTHCPYKGDASYFSIVAGGEPQANAVWSYENPFPAMAEIAG FT YLAFYPQKVQTEEFKP" FT CDS 33836..34072 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1600" FT /product="BolA-like protein" FT /function="InterPro IPR002634 COGs COG0271" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR002634" FT /db_xref="UniProtKB/TrEMBL:Q6N9E9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27041.1" FT /translation="MPMDARDIEAMIKAAIPDAEVTIRDLAGDGDHYAATVISETFRGK FT SRVQQHQIVYQSLQGQMGGVLHALALQTGVPEA" FT CDS complement(34147..34671) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1601" FT /product="possible transcriptional regulator, MarR family" FT /function="InterPro IPR000835:IPR005829 COGs COG1846" FT /db_xref="GOA:Q6N9E8" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q6N9E8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27042.1" FT /translation="MTPETNNADDEPIGTATDINHADRLLHRLVWDVSAISFSILRMAE FT LLGRRVGLTGSQWLLIKAVDFLADRDGVPVGEVAALLNMKGSFVSAQIRPLEQRGLLNR FT TQSAEDRRVILLSLTGSAKQTLTRVEDEMCSIEEIARGTLVDRHVGELSDSVNAMRRRM FT DRATARVARLD" FT CDS 35344..36066 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1602" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9E7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27043.1" FT /translation="MSNWREERTKANALALAQLTKRLPDAFPQAVLTHAKARAYVPSTL FT RVAVDSYWRAHPLRAERLARVLAARSGAPAGWQWHVGDSEAGLPATFRTPPAPYRERAH FT QRGPGFCCVCGQPVYRFGWHADLWDAGINKNATWHSACVTAWQFWNVPSGQTKLLRRLQ FT GRRCRETNRRLLRTAEVDHLVPLFQVWRQHRDRTWPELLGYWGLPNLQVINREVHAAKC FT ANEARDRRSARLAATEHA" FT CDS complement(36128..37195) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1603" FT /product="putative fatty acid desaturase" FT /function="InterPro IPR005804 COGs COG3239" FT /EC_number="1.14.99.-" FT /db_xref="GOA:Q6N9E6" FT /db_xref="InterPro:IPR005804" FT /db_xref="UniProtKB/TrEMBL:Q6N9E6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27044.1" FT /translation="MPSNMPHDAEAPASDARLWTRILAEYGTPSRSRSIAELTITALPL FT VALWSAAWFVYSMGHAWASLLIAIPAAGFLLRLFMIQHDCGHGAFFSKRQANDWVGRAI FT GVITLTPYDCWRRQHATHHATTGNLDRRGVGDLDTLTVREYSELSWWGRLKYRLYRNPL FT VMFGLGPAYVFLLQQRLPVGLMRDGWRPWVSAMATNAAIAGIVVTLTWFIGIKAFLLVH FT LPIMLLAATAGVWLFYVQHQFETTTWEHNERWSLHQAALYGSSYYDLPAPLSWFTANIG FT MHHVHHLASRIPYYRLPRVLHDHPELRAIGRVTLWQSFRCIPLALWDEAQRRLVSFRDV FT RAQKQQQATVGLATR" FT misc_feature complement(order(36479..36544,36557..36622,36644..36709, FT 36953..37009,37025..37090)) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(37552..38532) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1604" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR017804" FT /db_xref="UniProtKB/TrEMBL:Q6N9E5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27045.1" FT /translation="MNVHVAVQTQAHRLDSNTAAFARDVLDGLTKPQKELSPKYFYDDT FT GSELFVEITRLPEYYPTRTELGILRDRAAEIAALIPPDAAIVEFGAGATTKIRLLLAAH FT QVAAYVPVDISGDFIITQAEALQRDFPQLAVHPLAADFTKPFALPPAVRDLPKVGFFPG FT STIGNFEPQEARRFLESARDILGRGARMIIGVDLEKDENVLVPAYDDAAGVTGKFNLNL FT LIRINRELGADFDLSAFAHRAIYNRDQHRIEMHLVSLRDQSVHLFGERIGFRAGESIHT FT ENSYKYSLERFRALAQQAGWTPARCWTDADAMFSVHAIETNGSRV" FT CDS complement(38578..39837) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1605" FT /product="conserved hypothetical protein" FT /function="COGs COG1262" FT /db_xref="InterPro:IPR005532" FT /db_xref="UniProtKB/TrEMBL:Q6N9E4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27046.1" FT /translation="MLVTILSSAASAAAESSTSSVSTRDLAAQLATAYRAVRDETERRA FT APLSPEDQVVQSMPDASPAKWQRAHTTWFFEQFLLGPHCPDYQVFHPDYAFLFNSYYVS FT AGPRHTRAARGLLTRPGVAEIAAYRRHVDEAMLNWFVTADAAKLEEVAPLIEVGLNHEQ FT QHQELLLTDILHAFAQNPIPPAYDPAWRLPTTDHHGEDWVTLPEGIHPIGHAGDSFHFD FT NEKPVHRALVGPVRLARHLVTNAEWLQFMAEGGYRTATLWLMDGFACAEREGWEAPGHW FT RQVDGEWKIMTLGSLQSIDPDAPVCHVSYYEADAFARWAGKHLPTEMEWEVAARAGQLP FT DAFGAVWQWTRSAYAPYPGYKAIDGALGEYNGKFMVNQLVLRGSSCATPEGHSRVTYRN FT FFYPHHRWQFTGMRLADYGA" FT sig_peptide complement(39754..39837) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.988) with cleavage site probability FT 0.424 atresidue 28" FT CDS 40065..40448 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1606" FT /product="conserved unknown protein" FT /function="InterPro IPR004480 COGs COG0278" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9E3" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q6N9E3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27047.1" FT /translation="MTVRPGRWWSAGRAAKGFAMSIEQFIDNEVKANDVVLFMKGTPQF FT PQCGFSGQVVQILDHIGVPYKGHNVLENAELRDGIKVYSNWPTIPQLYVKGEFVGGCDI FT VREMFQAGELQKLFTDKGIKAAA" FT CDS 40445..40987 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1607" FT /product="Appr-1''-p processing enzyme family protein FT homolog" FT /function="InterPro IPR002589 COGs COG2110" FT /note="CTG start codon; 64% identity to Bradyrhizobium FT japonicum Bll5710 protein" FT /db_xref="InterPro:IPR002589" FT /db_xref="UniProtKB/TrEMBL:Q6N9E2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27048.1" FT /translation="MSHFSRQIGTATCEVVVADITTLAVDAIVNAANSSLLGGGGVDGA FT IHRAAGPELLAECETLGCCETGDAKITRGYRLPARHVIHAVGPIWHSGGHGEDAALASC FT YARALQLANEHALTSIAFSAISTGVYGFPPERAAPIAVRTTLDALRSATSVTRAVFCCF FT SPASAELHRAALADAAP" FT CDS 41047..42327 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1608" FT /product="Beta-lactamase" FT /function="InterPro IPR001466 COGs COG1680" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR001466" FT /db_xref="UniProtKB/TrEMBL:Q6N9E1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27049.1" FT /translation="MLRRAKRWLMAGALAAMAANPAIAETTFDLPPSVQFSDKKLERID FT EFFNKIIAEGKIPGAIVYIERHGKPVYHKYFGVRDVATKEPMTDDTIFRLASLTKPFTA FT FAVMTLVDDGKIKLDDPVSKYIPAFADTKVGVEKKREDGEKYLDFVAPKRPILVSDLLL FT HTSGITYGFYGDSLVRKTIAAAKIYDGDPSNAEFAERIAKLPLQEQPGTLWDYGNSYEV FT LGRVIEVASGKSFYEYQKERLFDPLGMKDTRYYLATDEQKARMAQPMPNDADFRVGRPS FT RPDIVKKWESGGGGLTSTPSDVIRFVRMLHNKGELDGKRYLSEAVFKDMTTDHIAPNSG FT VERDYFYFPGDGFGYGYGLGVRTDAGNAKPPPPGSLGELKWDGASGCYFVVDPKLDMFF FT VLMEQTPSHRQPIQRELKKLVYEALDN" FT sig_peptide 41047..41121 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.995 atresidue 25" FT CDS complement(42338..43966) FT /codon_start=1 FT /transl_table=11 FT /gene="mdlC" FT /locus_tag="RPA1609" FT /product="benzoylformate decarboxylase" FT /function="InterPro IPR000399 COGs COG0028" FT /EC_number="4.1.1.7" FT /note="75% identity to Bradyrhizobium japonicum probable FT benzoylformate decarboxylase" FT /db_xref="GOA:Q6N9E0" FT /db_xref="InterPro:IPR012000" FT /db_xref="UniProtKB/TrEMBL:Q6N9E0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27050.1" FT /translation="MPAKKSKQPSAAVTTVKSATLDLLRAFKIDKVFGNPGSTELPFLS FT DWPDDIDYVLALQEASAVAMADGYAQATRNAGFVNLHSAAGVGNALGNIYSAFKNQTPL FT VITAGQQARSLLPLQAFLGAERASEFPRPYVKYSVEPARAEDVPAAIARAYYVAMQPPC FT GPTFVSVPIDDWARPAAPVPPRTITREIGPDRSAMQVLADTLANAKKPALVVGPAIDRA FT AAVGLMARLAERAKAPVWVSPFSARCSFPERHPLFAGFLPASPGQLSETLGAYDVIVLI FT GAPVFTFHVEGHAAIFDGASQLFQITDDAEAASVTPLGASIIATMTPALTLLLELLPET FT KRAAPPARAVPPAPRPAEPMPVEYLLHTLRAAMPESAMLVEEAPSHRPAMQTYMPMPGQ FT DSFATMASGGLGWSLPASVGFALAHPNRRTVCLIGDGSAMYSIQALWTAAQRKLPLTVV FT VLNNGGYGAMRSFSQVMQVRNVPGLELPGIDFTALAQSLGCDAVRVTRSEELAPALTRA FT LAWDGVSLVEVMLDTSVPMLYARNG" FT CDS complement(44236..45093) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1610" FT /product="conserved unknown protein" FT /function="COGs COG3777" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N9D9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27051.1" FT /translation="MTDALDIDHLRQWIGRSEQATDFVTPQLVKGLRATLFLDIGKPQT FT GDAAPFTVHWCLGQPVYPMDQLGPDGHPTRGGFLPPVPLPRRMWAGGELQFVDALKVGD FT EVTRTSTIGDVTIKQGSTGTLCFVTVNHEITTPRGVAIRDRQDIVYRDVPPPSSAPAAP FT AKPAAAPPAAKHRESHLADPVLLFRYSALTFNGHRIHYDRDYVTKVEGYPGLIVHGPMQ FT AALLVEFAAKLKGSVPKTFSYRGVQPLFDGADFSVNANETAAGLDLWTANADGVPTMKA FT TASW" FT CDS complement(45106..46200) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1611" FT /product="putative dehydratase" FT /function="InterPro IPR003673 COGs COG1804" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9D8" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q6N9D8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27052.1" FT /translation="MLPLEGLTVIAVEQAVAAPYCSSRLADAGAHVIKIERPEGDFARG FT YDAAAKGQSSYFVWLNRGKESAVVDLATKEGRAELEKLIASADVLLQNLKPGSMDKLGF FT ARERLRKDYPKLIICTISGYGDEGPYAHRKAYDLLIQAESGLASITGGPESASRVGMSI FT VDVATGATAHAAILEALIGRGRTGQGADIRISMFDVMADWLTVPLLNAEAGNPPKRLGL FT AHPSIAPYGVFTSKDGKDILISIQSEREWKKLCSDVLRQPDLPNDPRLCNGVERVKNRA FT YTDKIVADIFGSLTRDDLLEHLAAADIAFAEVNAMEDLSHHPHLRRIEVDTPNGKVSYP FT APAAIFVGDERRYGAVPGIGDKRK" FT CDS complement(46401..47573) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1612" FT /product="putative acyl-CoA dehydrogenase" FT /function="InterPro IPR006089:IPR006090:IPR006091:IPR006092 FT COGs COG1960" FT /EC_number="1.3.99.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9D7" FT /db_xref="InterPro:IPR006092" FT /db_xref="UniProtKB/TrEMBL:Q6N9D7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27053.1" FT /translation="MKHHAAEQDEYHDIRDAVAKLCAQFPGEYWRKLDREMAYPKAFVD FT ALTEAGYLSVLIPEEYGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTLLRHGSD FT EQKAKWLPKIASGELRLQAFGVTEPTSGTDTTSLKTFAKKDANGDYVVNGQKIWTSRAE FT YSDLMILLARTTPKDQVTKKTEGLSVFLVDMREARGHGLEIRPIRTMMNHATTEVFFTD FT MKVPKENLIGEEGKGFRYILSGMNAERILIASECVGDAKWFIAKASAYAKDRAVFGRPI FT GQNQGIQFPIAKAYANMRAAELMVKEATRKYEAGMDCGAEANMAKMLAADASFEAANAC FT IQTHGGFGFAEEYDVERKFRETRLYQVAPISTNLILSHLAEHVLGMPRSY" FT CDS complement(47607..48872) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1613" FT /product="putative cytochrome P-450" FT /function="InterPro IPR001128:IPR002397 COGs COG2124" FT /EC_number="1.14.-.-" FT /db_xref="GOA:Q6N9D6" FT /db_xref="InterPro:IPR017972" FT /db_xref="UniProtKB/TrEMBL:Q6N9D6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27054.1" FT /translation="MHGTIETGKAARLRAAREEAYATPLKDFHPGAPRHFRDDTLWPWF FT ERLRAEEPVHYCTNAPIEPYWSVTKYNDIMHVDTNHQIFSSDSTLGGISIRDAPVGYDW FT PSFIAMDEPRHSAQRKTVSPMFTPQHLDELAVLIRGRTQKVLDGLPRGETFNFVDRVSI FT ELTTQMLATLFDFPFDERRKLTRWSDVATALPKSGVVDSEQQRRDELNECAAYFARMWN FT DRVNSEPRNDLLSMMAHHDATRTMDRDNLIGNILLLIVGGNDTTRNTMSGSVLALNENP FT HEFEKLRANPKLIDTLVPEVIRWQTPLAHMRRTALQDAELGGKTIRKGDRVVMWYVSGN FT RDDEVIERPEEFIIDRARARIHLSFGFGIHRCVGMRLAELQLRIVWEEMLKRFERIEVV FT GEPKRVYSSFVKGYESLPVRVS" FT CDS 49220..50392 FT /codon_start=1 FT /transl_table=11 FT /gene="ivd2" FT /locus_tag="RPA1614" FT /product="isovaleryl-CoA dehydrogenase" FT /function="InterPro IPR006089:IPR006090:IPR006091:IPR006092 FT COGs COG1960" FT /EC_number="1.3.99.10" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9D5" FT /db_xref="InterPro:IPR006092" FT /db_xref="UniProtKB/TrEMBL:Q6N9D5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27055.1" FT /translation="MMSNAQSLFNFDLGETADAIRETVRDFAANEIAPRAEAIDKTNTF FT PRDLWPKLGALGLHGITVEEDYGGAGLGYLEHCIAMEEISRASASVGLSYGAHSNLCIN FT QIRRNGNEAQKQKYLPKLISGEHVGALAMSEPGAGSDVVSMKTRADKKGDRFVLNGNKM FT WITNGPIAETLVVYAKTDPNAGPRGITAFLIEKGFKGFSTAQKLDKLGMRGSDTGELLF FT EDCEVPEENVLGEVGRGVNVLMSGLDYERAVLAAGPVGIMQACMDVVLPYVHERKQFGE FT PIGTFQLVQGKVADMYVTMNASRAYVYAVAKACDRGETTREDAAGAILYAAERATQCAL FT DAIQLLGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFTKTA" FT terminator 50407..50431 FT /note="TransTerm prediction, 98+%" FT CDS 50488..51282 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1615" FT /product="putative methyltransferase" FT /function="InterPro IPR000051 COGs COG0500" FT /db_xref="GOA:Q6N9D4" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q6N9D4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27056.1" FT /translation="MDAKEVSAHWESNAETWTMLSRAGHDRYRDTLNTPAFLAMLPPVA FT GLKGLDLGCGEGTNTRTVARLGASMTGLDIAPTFLRHARDAERRDPLGIDYVLGDGLTL FT PFADRSFDFVTAFMSMMDMVDQAAVLREVARVLKPGGFLQFSILHPCFVPPTRRNIRDA FT EGAPVAVEVADYFDESDGRVERWLFSSISAEQQAALTPFAVPRFHRTLSTWVAMIVGAR FT LSIEAFGEPRASEEVAAAEPIVADTRVAPIFLHVLAKRPTTP" FT CDS complement(51279..52085) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1616" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9D3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27057.1" FT /translation="MHCGARHLRPALAAVTAAITLLATAPASAAEATDFSATQRSEKTD FT FTDSQIADGFFRTAFGAEFHMAGRVDRIRKYEAPVRVYAEGDGQAHRRAELARIVSDIA FT GRVEHLDIAMTDNPDEANVTVHLVRDRNLGKTIATFYGEERAREIRESLDPQCLSGFRK FT NDRFEIERSDVILTIDNGDFVFRDCAYEELLQSLGPINDTDKVPWTMFNDDVQKGYFDV FT YDQYLLNILYHPAIRPGMTVPEVKAVLPQVLADVRSYVAKVNRLTR" FT sig_peptide complement(51996..52085) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.988 atresidue 30" FT CDS complement(52172..52753) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1617" FT /product="ErfK/YbiS/YcfS/YnhG" FT /function="InterPro IPR005490 COGs COG1376" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:Q6N9D2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27058.1" FT /translation="MVRRLAASALALISIATALPTAASAQELDLRSVMGFGPFYRSGPS FT ANPIPRETVMFEGNYAPGTIVISTRERRLYLVQGDGTALRYGIGVGRDGFRWSGTHRIT FT AKREWPGWTPPAQMLRRRPDLPRYMAGGEDNPLGARAMYLGSTLYRIHGSNEPETIGQA FT VSSGCFRMTNDDVKDLYDRVRVGTVVVVKN" FT sig_peptide complement(52676..52753) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.963 atresidue 26" FT CDS 52934..54478 FT /codon_start=1 FT /transl_table=11 FT /gene="ilvX" FT /locus_tag="RPA1618" FT /product="putative acetolactate synthase large subunit" FT /function="InterPro IPR000399:IPR001687 COGs COG0028" FT /EC_number="2.2.1.6" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9D1" FT /db_xref="InterPro:IPR011766" FT /db_xref="UniProtKB/TrEMBL:Q6N9D1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27059.1" FT /translation="MNGAESLVRTLVKGGVDVCFTNPGTSEMHFVAALDRVEGMRCVLG FT LFEGVVTGAADGYYRMKGTPASTLLHLGPGLANGLANLHNAKKAASGIVNIVGQHATYH FT IDYNAPLTSDIEGLARPMSAWVRTSPDAKSVARDGAAAIAAAKSSPAQIATLILPADTA FT WNEADGVADVPEDSQRPTYSPHAVEAAARVLRSGEPTLLLLSGAALTEHGLALAQRIAG FT KTGCKVMGQTYNARMARGQGRYWIERIPYVVDAALPILKQFRHIVLVEAMDPVAFFAYP FT DKPSLLKPEGCEAHRVTEIGENSVAALEALAGALGAKASDAAPQKLVDIAKPTGALTLD FT NIAQAIAMAIPENGIVIDESITTGRGFFPPTAAAAPHDWLQNLGGSIGFSPPVAVGAAV FT ACPDRKVLCMVGDGSAMYTVQALWTQARENLDVTTVVFANRKYQILRGEFDGVGAGKPG FT QRAEDMLTLDRPDLDWVALAKGMGVPAKNVSTADEFNAALAAGLASGGPNLIAVQM" FT CDS 54534..55022 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1619" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9D0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27060.1" FT /translation="MAGSVACRLRPGMAAGGTGMKRYVIFAAIGPLIGGLLLLFATTYQ FT SGYWAHTNLTEVQKFFVVLFKSLQYSYLFGLLPALMMAAIDEIICHIRRVGPGGRVVIV FT GVIGFLATAFMYGNRGADAGVLQFVLYGLVGLVPATLSSWLANKFCAPVTAETKPASA" FT misc_feature order(54600..54668,54711..54779,54816..54884,54900..54968) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(55185..55505) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1620" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N9C9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27061.1" FT /translation="MPHTIDQKINALLEQETSLRQWLEQIRALTKDARGATVIAGLTQK FT ETEEFLLLSPLVRAFDSGMTADHAAAVRARHAELKAKLEGALQDNAIESLSGWGEATAA FT AR" FT CDS 55705..56577 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1621" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9C8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27062.1" FT /translation="MYSNDGEKVADFARVVLNLADAKLRDEHFYASVPLCVIDAVFSIG FT VNYVATRRTVLRWASRQNPAWPIDRRTSSVEHTVSDLLAALGDRTDLELALGQFGNRQR FT TSSRNGILKAEAVRLFALALKEAGIDSFADLEDSEKVGRAEAMVKTIKGQRSGISFDYF FT ALLAGHELVKADRMVCRFVADALGLHEVGPTVAKQAVLEAAAILARQFPHVTPRLLDSE FT IWGYQSAKGRQRGRVSGTKRDTSPGGEDAPKLCGTPGVSAEPVVIRENGGRTRDRTLDL FT SRVKGTLSR" FT misc_feature 55789..55857 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT tRNA complement(56514..56588) FT /gene="tRNA-Val3" FT /locus_tag="RNA_36" FT /product="tRNA_Val" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(56731..58011) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1622" FT /product="conserved unknown protein" FT /function="COGs COG1196" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N9C7" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27063.1" FT /translation="MVEQIMYLAIGFLVAMLLALMLAPLVHNRAVRLTTKRLEAATPLS FT MAEIQADKDQLRAEFAMSARRLEMSVDQLKNKTTSQFAEIGKKTDAINRLKLELTEKIA FT AIETLEAREKALQEQLQTTEQNFAARTEELRSAEAALAEKQAELARINAELNERSTLAD FT TRQVELVALHARIEELQARVGEAEKEFAATRSRLEAQRGESASTTRELDEARGRVEALS FT LRVGELDRQLLLQVKEAELLGGRVHELEERLAAQSKLLAEREFENNQLRAANEAALRTV FT GELRNELDATSSKSPDLARIRKDKAALEDQLTQARDERAKAQRELAALKQQAESSWETE FT RMENALLRERINDIAAEVAKLAITLEGPDSPIQAMLTAPTPAKPAKGKAAANGTKNAGV FT TPVVAGGTLADRIRALQSHASRARQTG" FT sig_peptide complement(57925..58011) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.840) with cleavage site probability FT 0.687 atresidue 29" FT misc_feature complement(57931..57996) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(58251..58904) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1623" FT /product="conserved unknown protein" FT /function="InterPro IPR000568:IPR006311" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR008325" FT /db_xref="UniProtKB/TrEMBL:Q6N9C6" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27064.1" FT /translation="MPVSIRLKRRKGFEDPGVNCMSFVTRRAALAFVALAALHLPAAAQ FT QQPLPPKSQAGPNTYGPDELVGAGHRFFGNVSRGLASVIERAVSQWGLPNGYVLGEEGS FT GAFVAGLRYGEGTLYTKNAGDLKVYWQGPSVGFDWGGNGARTMTLVYNLPSTNAIYQRF FT GGIDGSAYVVGGFGMTALTANGIVLVPIQSGIGLRLGANIGYLKFTPSATWNPF" FT misc_feature complement(58332..58397) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(58770..58904) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.997) with cleavage site probability FT 0.929 atresidue 45" FT CDS 58952..59458 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1624" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007029" FT /db_xref="UniProtKB/TrEMBL:Q6N9C5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27065.1" FT /translation="MTAQRQERNRMRLRIALIGLLGLVAVGSSVPVIVHAGTTERLVVD FT RTTGLAIDGFDPVAYFTDHQARQGQSEFEASAKGAVWRFCNDDNRKFFLARPDIYGPQF FT GGYDPVAVARGVPLAGNALIWLISGQRLYLFDREENRDAFAANPERYLHDARERWPGLL FT ATLAE" FT sig_peptide 58952..59062 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.983 atresidue 37" FT misc_feature 58988..59056 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(59467..60294) FT /codon_start=1 FT /transl_table=11 FT /gene="cysQ" FT /locus_tag="RPA1625" FT /product="putative CysQ protein" FT /function="InterPro IPR000146:IPR000760 COGs COG1218" FT /db_xref="GOA:Q6N9C4" FT /db_xref="HSSP:1KA1" FT /db_xref="InterPro:IPR017955" FT /db_xref="UniProtKB/TrEMBL:Q6N9C4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27066.1" FT /translation="MTAAFEQPAVVSAEHAAALLEPLTKLVLRAGAAIMVIPRDAKVTQ FT KPDGSPVTPADLAADQVIAEGLAQIAPHVPVLSEECCGNGRPTSGSFFVVDPLDGTKEY FT IAGRDEFTVNLALVCDGVPVLGIIGAPALGLAWRGVVGHGAEQLTVAADGVSFAATAIR FT TRPLPQPGEPWTATVSRSHLDAATVAFIDARPGAVHATLGSSLKFCRIAEGKADIYPRL FT APICEWDIAAGAALVIAAGGKVTDAAGAPLRFDAPRPNFIVPEFIAWGDPDGR" FT CDS 60428..61084 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1626" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR018762" FT /db_xref="UniProtKB/TrEMBL:Q6N9C3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27067.1" FT /translation="MSDTQSPAVQAPAPDALELAALLCSRVCHDLISPVGAIVNGLEVL FT DDSSKQEDRDFALELIRKSAKTASARLQFCRLAFGAAGSAGAQIDLGDAQNMARGHLED FT DKTKLTWNLPRLLLAKNRVKLLLNMLVIAQQTIPRGGTLTIDPIGEGDNLSFRIVAAGI FT NARTPHNIVDLLNGTQSGPIESHGVQPYYTRLLAQACGLTVSLAPEGDTMVVTAS" FT CDS 61275..64088 FT /codon_start=1 FT /transl_table=11 FT /gene="cheA2" FT /locus_tag="RPA1627" FT /product="multidomain chemotaxis histidine kinase CheA2 FT (Hpt, CheA, CheW, & Resp. Reg. Rec. domains)" FT /function="InterPro FT IPR001789:IPR002545:IPR002570:IPR003594:IPR004105:IPR004358 FT :IPR005467 COGs COG0643" FT /EC_number="2.7.3.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N973" FT /db_xref="HSSP:1B3Q" FT /db_xref="InterPro:IPR008207" FT /db_xref="UniProtKB/TrEMBL:Q6N973" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27068.1" FT /translation="MDDLLREFLTETFESLDTVDNQLVRFEQEPNNAKILDNIFRLVHT FT IKGTCGFLGLPRLEALAHAAETLMGKFRDGMPVTGEAVTLILTTIDRIKDILTQLEATQ FT AEPEGEDGDLIGELERLSMRSPEEIAAELGGAAPVEVAEVEAPAEAVVAEAADANSTEG FT TLVAQTLERPLRPGEVSLDELERAFRETEIEMASPPLQPAVSEAPAAVAEAAPPEPKPA FT KPAKPAAKPAAKKSGGEGEGAAEGGAAGGVANQSIRVNVDTLEHLMTMVSELVLTRNQL FT LEISRRHEDNEFKVPLQRLSTVTAELQDGVMKTRMQPIGNAWQKLPRIVRDLAAELGKQ FT IELEMHGADTELDRQVLDLIKDPLTHMVRNSADHGLEKPEDRARAGKPEQGTIRLSAYH FT EGGHIVICIADNGRGLDTERIKAKALANGLVTEAELEKMTEAQIHKFIFAPGFSTAAAV FT TSVSGRGVGMDVVRTNIDQIGGTIEVKSVAGEGSAITIKIPLTLAIVSALIVEAGGDRF FT AIPQLAVVELVRARANSEHRIERIKDTPVLRLRDKLLPLIHLKKLLGIDEGANSEPENG FT FIVVTQVGSQTFGIVVDGVFHTEEIVVKPMSTKLRHIGMFSGNTILGDGAVIMIVDPNG FT IAQALGTAVSAQHDISDQAAASRNASAEQLTSLLVFRAGSSQPKAVPLSLVTRLEEIAS FT DKIEMSNGRYMVQYRDQLMPLVLMEGVEVATSGVQPILVFADEDRSMGLVVDEIVDIVE FT EHLHIQVGSSREGILGSAVIKGQATEVIDVAHFLPMAFSDWLARKEMKQSLTTRSVLLV FT DDSAFFRNMLGPVLKAAGYKVRVATSAVEGLSVLRSGAQFDVILTDIEMPEMNGFEFAE FT AIRSDTKMSNLPVIALSSLVSPAAIERGRQAGLTDYIAKFDRPGLIAALKEQTTMHATP FT EVLEQAA" FT CDS 64085..64585 FT /codon_start=1 FT /transl_table=11 FT /gene="cheW2" FT /locus_tag="RPA1628" FT /product="chemotaxis signal transduction/oligomerization FT protein CheW2" FT /function="InterPro IPR002545 COGs COG0835" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N972" FT /db_xref="InterPro:IPR002545" FT /db_xref="UniProtKB/TrEMBL:Q6N972" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27069.1" FT /translation="MSETRKDTPAMSRTIDAISGNTTQFATAMIGGQLFGLPISRVQDV FT FMPERLTRVPLAPDDVAGVLNLRGRIVTAIDMRARLGLPKNQDGKPPMAMGVDLRGESY FT GLLIDSIGEVLTLPDEGRETNPVNLDPRMASFANGVHRLDGQLMVVLDVDKVLEIATQR FT MAA" FT CDS 64653..65018 FT /codon_start=1 FT /transl_table=11 FT /gene="cheY2" FT /locus_tag="RPA1629" FT /product="chemotaxis response regulator, CheY2" FT /function="InterPro IPR001789 COGs COG0784" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9C0" FT /db_xref="HSSP:1AB6" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q6N9C0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27070.1" FT /translation="MKTCLVVDDSSVIRKVARRILEGLDFEIVEAEDGEKALEACKHGL FT PDAVLLDWNMPVMDGYEFLRNLRRMPGGDAPKVVFCTTENDVAHIARALHAGANEYIMK FT PFDKDIVTAKFQEVGLI" FT CDS 65097..66272 FT /codon_start=1 FT /transl_table=11 FT /gene="cheB2" FT /locus_tag="RPA1630" FT /product="chemotaxis methylesterase, CheB2" FT /function="InterPro IPR000673:IPR001789 COGs COG2201" FT /EC_number="3.1.1.61" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P62644" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/Swiss-Prot:P62644" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27071.1" FT /translation="MSVALAGSPATNSAQYEPLRVMIVDDSVVIRGLISRWVEAEPDMV FT VAASLRTGLDAVNQLERVKPDVAVLDIEMPELDGISALPQLLAKKRDLVVIMASTLTRR FT NAEISFKALSLGAADYIPKPETTREPQAADIFKHDLLQKIRSLGGRVRRRAVPGVAAPA FT IAREPHPAPLPHPAVATPTVASQAALVKRSFGPTAPRVLLIGSSTGGPQALMSMVADIG FT PVIDRFPVLITQHMPPTFTTILAEHLARASRRPAHEGIEGEAIKPGNIYLAPGGKHMRV FT AKQGGNPVIALDDGPPVNFCKPAVDPLFMSAIEVWQGGILAVVLTGMGSDGMRGGKDIV FT AAGGSVIAQDEASSVVWGMPGAVANAGVCAAVLPLNQIGPKVVRLFAGDRS" FT CDS 66269..67147 FT /codon_start=1 FT /transl_table=11 FT /gene="cheR2" FT /locus_tag="RPA1631" FT /product="chemotaxis methyltransferase, CheR2" FT /function="InterPro IPR000780:IPR001601 COGs COG1352" FT /EC_number="2.1.1.80" FT /db_xref="GOA:Q6N9B8" FT /db_xref="HSSP:1AF7" FT /db_xref="InterPro:IPR000780" FT /db_xref="UniProtKB/TrEMBL:Q6N9B8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27072.1" FT /translation="MNPLDYDFLRKLLKDRSGLDLSADKQYLVESRLLPLARRLSLGGI FT GELVQKMKGMGAESLISDVVEAMTTNETFFFRDKVPFDHLREEMLPALLQARAARRSLR FT IWCAASSTGQEPYSIAMTLKELGPAVAGWRFEIIATDLSPQVLEKSKSGLFSQFEVQRG FT LPIQLLVKYFKQAGEVWELSPEIRAMVQHRQLNLLHDFSSLGTFDIVFCRNVLIYFDQT FT TKVGILERIAKRLEPDGYLTLGAAETVVGLTDAFKPHNSRRGVYLPNLKSAPSIVPAFP FT ATTALSSLRAS" FT terminator complement(67366..67385) FT /note="TransTerm prediction, 98+%" FT CDS complement(67438..68139) FT /codon_start=1 FT /transl_table=11 FT /gene="ctrA" FT /locus_tag="RPA1632" FT /product="two-component cell cycle transcriptional FT regulator ctrA, winged helix family" FT /function="InterPro IPR001789:IPR001867 COGs COG0745" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9B7" FT /db_xref="HSSP:1KGS" FT /db_xref="InterPro:IPR001867" FT /db_xref="UniProtKB/TrEMBL:Q6N9B7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27073.1" FT /translation="MRVLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVDLGKLYDY FT DIILLDLNLPDMSGYDVLKQLRVSKIKTPILILSGLAGIEDKVKGLGVGADDYMTKPFH FT KDELVARIHAIVRRSKGHAQSVIQTGDLVVNLDTKTVEVGGQRVHLTGKEYQMLELLSL FT RKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLANASDGRNFIETVWGRGYVLR FT EPSEDDVRIPA" FT CDS 68507..69832 FT /codon_start=1 FT /transl_table=11 FT /gene="fliI" FT /locus_tag="RPA1633" FT /product="flagellum-specific ATP synthase" FT /function="InterPro IPR000194:IPR001687:IPR003593:IPR005714 FT COGs COG1157" FT /EC_number="3.6.3.14" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9B6" FT /db_xref="InterPro:IPR020003" FT /db_xref="UniProtKB/TrEMBL:Q6N9B6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27074.1" FT /translation="MKALAEQIGDIDSVNTYGRVVGVRGLMVEIAGPIHAMSVGARIVV FT ETGANREIPCEVIGFTGNNAIVMPFAGLEGVRRGCRAIIANSAAQVRPSPHWLGRVVNA FT LGEPIDGKGPLVQGPSPMQFRNQPPPAHSRKRVGMPLDLGVRALNTFLTCCRGQRMGIF FT AGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSD FT EPALMRRQAAYLTLAIAEYFRDNDKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTP FT TVFTELPKLLERAGPGLGEGTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRSIAE FT RGRYPAINVLKSVSRTMPKSADPVYLPMIKRARQIMATYADMEELIRLGAYRPGSSAEV FT DEAVRLHEPLEDFLRQGKDEATSLQSGYVQLEQILSNSETER" FT CDS 69942..70370 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1634" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9B5" FT /db_xref="InterPro:IPR012823" FT /db_xref="UniProtKB/TrEMBL:Q6N9B5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27075.1" FT /translation="MKSRETLIRLKKFQVDERRRRVAQIEAMIADFERMSSDLEREIVT FT EQERAGITDPSHFAYPTYAKAAIQRRENLTRSADELRVQLEEARGQLSEAFDEMKKVEL FT LDERDQARERAEESAREQADLDSIGLMRARLGGAGAVA" FT CDS 70547..71095 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1635" FT /product="RNA polymerase ECF-type sigma factor" FT /function="COGs COG1595" FT /db_xref="GOA:Q6N9B4" FT /db_xref="InterPro:IPR013249" FT /db_xref="UniProtKB/TrEMBL:Q6N9B4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27076.1" FT /translation="MLSPAELVSLIAAVAERDQDAFQRLYDATRAKLFGVVLRILRRQD FT LAEEVIQDAYVKIWNNAAQFDSTVASPITWMASIARNRAIDVARKRGEVSIEEEPSAND FT VAAETPDPLARREMTEELKRLLECIGRLEPDRQKLVLLAYYNGWSREQLGAKFGAPANT FT IKTWLRRSLLDVRGCLGLT" FT CDS 71095..72042 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1636" FT /product="conserved unknown protein" FT /function="InterPro IPR001687" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9B3" FT /db_xref="InterPro:IPR018764" FT /db_xref="UniProtKB/TrEMBL:Q6N9B3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27077.1" FT /translation="MAHSEDHSALAAEYALGTLDAAERAEAEALTRSDAEFAALVKAWE FT LKLGALNQMVGLVEPRAEVWDRIKAAIAAESQRAVPPQAAPPIGDVANAGVLGAPGDPI FT LPRPANDTGPAPSSASSELSPESKRVVHFAKRAYIWRGVAMLSSAVAASLLLVVGAQVY FT QPDLLPDGVRPPIRTKIVKVETPPPAVPAQYVAVLQKDGNAPAFILTVDAGSKTFTVRR FT VAATPEPGKSYELWIVSDKLQKPRSLGVIGNRDFTVNPVLSSYDPDLVSKATYAVTVEP FT EGGSPTGVATGPIVFTGKLVESVPQEPIPTTPRQ" FT misc_feature 71506..71574 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT terminator complement(72122..72152) FT /note="TransTerm prediction, 98+%" FT CDS complement(72240..72440) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1637" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9B2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27078.1" FT /translation="MNHSIYSADRTTHLKIVAVALVAGIAVAGLGITARLGADDGYTQT FT AKVIKAGKPTAISKAETMVIR" FT misc_feature complement(72327..72392) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(72327..72440) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.920) with cleavage site probability FT 0.528 atresidue 38" FT CDS complement(72772..74904) FT /codon_start=1 FT /transl_table=11 FT /gene="flhA" FT /locus_tag="RPA1638" FT /product="putative flagellar export protein FlhA" FT /function="InterPro IPR000104:IPR001712:IPR006301 COGs FT COG1298" FT /db_xref="GOA:Q6N9B1" FT /db_xref="InterPro:IPR006301" FT /db_xref="UniProtKB/TrEMBL:Q6N9B1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27079.1" FT /translation="MTDTTVGQSTGSGIPSLNEMIAILRRGDLALAIGVLTILVVLILP FT LPAIILDLFLAISITLSILILMTSLFIQAPLEFSSFPTVLLISTMLRLSLNMASTRLIL FT SHGHEGTAAAGHVIEAFGGFVMGGNFVIGIIVFTILIIVNFVVITKGSGRIAEVAARFQ FT LDSMPGKQMAIDADLSAGLIDEATAKARRKELEDESGFFGAMDGASKFVRGDAIAGLLI FT VFINVIGGIIIGVAQQGLSFSEAGHTYTLLTVGDGLVTQIPALIVSTAAGLLVSKAGIS FT GSADKAMMGQLSGYPQALGMAAAVMLVLAVLPGIPTLPFLALGSGSAYLALKARNRKRE FT VTAEAAQAAAAPEAAAAAAAAASAAEEPIAAALKIDDLKIELGYALLPLVNGPDGQDRL FT TEQIKALRRSLAIEMGFVMPAVRILDNVQLEANTYVIKIKEVDAGTGRIWPNQFMVMDP FT AGEQVTVPGIHTTEPTFGLPATWVDANFKEEASLKGYTVVDAATVLSTHLTELLKANMS FT DLLSYGETQKLLKDLPKEQGELVKDIVPGQITVSGIQRVLQLLLAERVSIRDLSTILEG FT IAEALAFSRNPSTIVEHVRARLARQICAQNTSYNGYLPLIALSAKWEQAFAESIIGQGE FT DRTLAMAPSKLSEFMTAVRDKFEQAAREGEAPVLVTSASIRPFVRSLVERFRAQTTVMS FT QAEIHPRARLKTVGSV" FT misc_feature complement(order(73936..74001,74065..74130,74191..74256, FT 74461..74526,74680..74745,74752..74817)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 75167..76411 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1639" FT /product="possible oxalate/formate Major Facilitator Family FT (MFS) antiporter" FT /function="InterPro IPR007114 COGs COG0477" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q6N9B0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27080.1" FT /translation="METPVEKTGKTPAFTLDSRQAWVRLGLALVIGSIGSVGMWSVVVV FT LPLVQAEFAASRGAASLAFTMAMLGFGLGGVATGKLTDRFGIVVAIGSGIGLLGLGYLG FT AGLSAALWQFAAFHLLIGAGASATFGPLMAEASHWFERYRGLAVTIAASGNYLAGTIWP FT PLVNWGSASIGWRATHLAIGGFCVVAMTLMVLILRARMRGHVAASHAAAPPPKIDLQLP FT TNTLTVLLSVASIACCVAMAMPQVHIVAYCGDLGYGAARGAEMLSLMLAFGIISRIGSG FT FLADRIGGIPTLLLGSVAQGAALMFYLFFDSLGSLYVISAMFGLFQGGIVPAYAIIVRE FT AMPAREAATRVGIVIMASVLGMSFGGWISGVIFDATGSYAAAFVNGMAWNAVNVAIILM FT LLLRARRRGPQVAMA" FT misc_feature order(75227..75295,75338..75397,75416..75484,75497..75565, FT 75602..75661,75689..75757,75842..75910,75938..76006, FT 76025..76093,76121..76180,76217..76285,76313..76372) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT terminator complement(76443..76470) FT /note="TransTerm prediction, 98+%" FT CDS complement(76503..78194) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1640" FT /product="methyl-accepting chemotaxis receptor/sensory FT transducer" FT /function="InterPro IPR000727:IPR003660:IPR004089 COGs FT COG0840" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9A9" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q6N9A9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27081.1" FT /translation="MLANVPLRTKITALVAVLLIALSGLGLLGLLQMRTLNTSTVDIGT FT NWMPSVRVLGEMRTNVALYRNTLRAHLLEATTERKLATEKQVAAFDEAVKQSLRTYASM FT VATPEERKLYDSLVASWTNYTSLAPTGLEMSRKAAGELPVAANDYMAKTMGPISAQIDE FT VLKKDIDLNDKGAAGATASAEATYLWAIFLMIGILVVAIVIGITASILVIRDLSRGIAS FT IVKPMQDFTRGDLSAEVPHRGKNTEIGAMADALQVFKQALLDKLTADAAAARDSEDKIA FT RGHRIDAATRQFEASVGEIVETVSSASTELEASARTLTTTAQHAQVQATTVAAASEQAS FT TNVQSVASATEEMTSSINEISRQVQESARIAVEAVDQARRTNATVGELSQAAARIGDVV FT ELINTIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTSKATGEISQHIGGI FT QAATGESVSAIREIGHTIERMSEIASTIASAVEEQGAATQEIARNVQQAARGTNEVSAN FT IVDVQRGASETGSASAQVLSAAQSLSQDSSRLKVEVANFLQSVRSA" FT misc_feature complement(order(77565..77630,78105..78161)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(78078..78194) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.968) with cleavage site probability FT 0.401 atresidue 39" FT tRNA 78855..78930 FT /gene="tRNA-Met2" FT /locus_tag="RNA_13" FT /product="tRNA_Met" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 79111..80031 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1641" FT /product="possible transcriptional regulator, AraC family" FT /function="InterPro IPR000005 COGs COG2207" FT /db_xref="GOA:Q6N9A8" FT /db_xref="InterPro:IPR000005" FT /db_xref="UniProtKB/TrEMBL:Q6N9A8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27082.1" FT /translation="MGTSAIDLACWDLGSFAMCQERNSGTRFSRTLRRVKTVFADHWYL FT FLIKAGSNWVVSDGGWSSGQEIRGAPGQLSLYSLGEAFHGEMNPIEVLMLFIPRDAFAR FT QAGRLDRLNNTIIDATRGRLLSDYMLALERQLPNLTHDEVPAIVRATEAMIAACLTPTP FT HSLEDARDGVILSLGERARKVVQARLYDPRLTPACLAKSIGVSRSALYRLFEPHGGAAR FT YVRNTRLAAAHRALCDLTETRQIQQIAGSFGFTSSQEFSRAFRLRYGYSPSELRADISR FT STLHLGRDPVIEGGRTLGEFLRTTA" FT CDS 80412..81926 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1642" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160:IPR002063 COGs COG2199" FT /db_xref="GOA:Q6N9A7" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N9A7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27083.1" FT /translation="MTISADPDRDWKNRISAQALRQIQELDLALDPNSFELWYTFFSGR FT HKALTEAVNALLAATGRPSAGDISGLYEQFLYPTKAVTRIHAIGALVHSQSNALIDVIE FT EASDATHGYETRLSSAAPRLALGRMEDGLQTIVDELLTWTMDIQTANAVLVDRLRSAAD FT QVRKLQDQLDQVRLESMTDPLTEVGNRKYFENQLSLHVASDDSGPLALLIVDLDNFKQF FT NDRHGHVVGDDVLRLAASTIKHNCRRDDVVCRYGGDEFAIILPRTPLREALLLGEAIRA FT AIAARELHRRSTHESLGRLLISIGAAEFRPGETADDFVERADHWMYAAKQARRDRTRPG FT PDAAARDPGERRPDILWHETYACGEPTIDAQHRELFDLANVILGPEIEMLEPARLSELV FT ELLLTRVAEHFQYEQAVLEASGYDECGLHRMEHDHLLIRARQVSEAVVSGHQSLGELRA FT FLVNSVILGHMLKDDRRFFPLFDRQASSATQSGAAPVHRERRRLSL" FT CDS 82123..82989 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1643" FT /product="possible high affinity iron permease FTR1" FT /function="InterPro IPR004923 COGs COG0672" FT /db_xref="GOA:Q6N9A6" FT /db_xref="InterPro:IPR004923" FT /db_xref="UniProtKB/TrEMBL:Q6N9A6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27084.1" FT /translation="MIGSQFGNVVIVVWREGVEALLIVGILNAWLRNNDASGIGRRYLW FT AGAAAGLLIACGFGTTIALSSSTIPVTSREIYEAIATLLAAGLIVHMVTWMRGQGRLLR FT DELEAALRQETSTASWWGVFTLAALAIAREGAETILFLLGALSASESASPAEPILGGIA FT GVGLALATYALLQFGSWIVTWRLFFRVTEVMMLLLAASLLMSGVDTLSKLGMLPSTARL FT WDSSAMLSDHGPIGALVAGLTGYRSQPTLLELGFYAAYWICVVLLLRKTTAPEQVVVAE FT NRAEIQR" FT misc_feature order(82150..82218,82252..82320,82348..82407,82480..82548, FT 82591..82659,82678..82746,82873..82926) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(82980..83729) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1644" FT /product="conserved unknown protein" FT /function="InterPro IPR002931 COGs COG1305" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR002931" FT /db_xref="UniProtKB/TrEMBL:Q6N9A5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27085.1" FT /translation="MRSESGNSGANSAMAKTAASEIAVCLAPAEFIDSDHPEVIARAAE FT ATRNAETLADKLRALYLAVRDGVRYDPYVDFSSPEIFRASSVLRAERGYCVGKASAFAA FT LARASGIPARVCFADVRNHLATENLTRTMGTDLFAWHGYAECFTGERWVKASPTFNRTL FT CDKLGVAPLDFDGSSDAVMQAFDNNDARFMEYVREHGAYFDVPVKFVQAEMKRQYPHLA FT QQGSLRGSMEEEAAQDAAARAAGSAQR" FT CDS complement(83719..83946) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1645" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="PDB:2JS3" FT /db_xref="UniProtKB/TrEMBL:Q6N9A4" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27086.1" FT /translation="MTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWL FT QTGDEIKHADDCPVVIAKQILSSRPKLHAV" FT CDS complement(84045..84314) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1646" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N9A3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27087.1" FT /translation="MTTFKLACAVMILSTATAVPALAGHRHHRAQHHHHHSHYHQSSSP FT YLHNYGPPIWPGHTYATYDGPVSALCSQGAAAYRGQDGRRHPCY" FT sig_peptide complement(84243..84314) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.566 atresidue 24" FT CDS complement(84391..85392) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1647" FT /product="putative esterase" FT /function="InterPro FT IPR000073:IPR000379:IPR000734:IPR002410:IPR003089 COGs FT COG0596" FT /db_xref="InterPro:IPR000639" FT /db_xref="UniProtKB/TrEMBL:Q6N9A2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27088.1" FT /translation="MTTLILLVLSVVVLFTAAGWVSCRLARRLEARYPPRGVFINANGV FT RMHALDLSPARPAASGQPTVLLLHGANLCCEDMRMSLGERLAQRLRVIVPDRPGQGYSV FT TGTGPVASPAYQVTLIREVLRDRDAGPLIVVGHSFGGLIALRYALDNPDTVAGLVLINP FT TTHPRPQGLPLFQRAAEVLMKPLVTYTLLPPLSLAMMKRISARIFRPETPPADYAERSR FT LALALTAKRFAASLEEYAGLRDQLIDHVPRYGAIQVPTVIVAGTADPVVPPQVHAEALA FT QAVPQARLLRLNGAGHMAHHAHADTIAAEIERLADAVAERAAPSRAEAAERS" FT misc_feature complement(85315..85380) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(85336..85392) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.947) with cleavage site probability FT 0.537 atresidue 19" FT CDS 85545..86807 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1648" FT /product="membrane permeases, predicted cation efflux FT pumps" FT /function="InterPro IPR006143 COGs COG0845" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N9A1" FT /db_xref="InterPro:IPR003997" FT /db_xref="UniProtKB/TrEMBL:Q6N9A1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27089.1" FT /translation="MLENVEQIDTPRPNLAVRWAGGLWRHKWPVLGIALVLIAAGLGLA FT RLLLGPEVVAALVQRGNLVQTVVASGHIETPYRVEIASQITGTVKDVLVKEGEQVHQGQ FT QLVAIEASELQASVVQAEGAVAQAQARVRQLRELTKPAADEALKQAQANLLNAQAAYER FT ASKLAASGYGTKATLDDATKNLDVARTQVRTAELQVFTTSPGGSDFVMAETQLGQALAN FT LNTAQARLGYATIVAPRDGVLITRNVERGTVVQPGKALLVLAPAGDIQIVVQIDEKNLG FT QLALGQHAMASADAYPDKRFDATLSYINPSVDINRASVEIKLKVDDPPDYLRQDMTVSV FT DIATARRDDVVIVPARAVNDAAAAPYVLKASGGRAVRQPVKLGLRGVGFYEVIDGLVPG FT DRVIPLATGVKPDQRIRAVLR" FT misc_feature 85626..85694 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 86804..88030 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1649" FT /product="predicted ABC-type transport systems, involved in FT lipoprotein release, permease components" FT /function="InterPro IPR003838 COGs COG0577" FT /db_xref="GOA:Q6N9A0" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:Q6N9A0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27090.1" FT /translation="MKRWLPFEWIAAVRFLLDGAVQTLVIVGGIAIGVGVIVFMSAMLA FT GLQANFIKRVLTSVPQIQLLPPDQVARPLRDQPGTVEAAVVQRPTQRMISIDQWPKIRA FT EMQARPDVVYAAATASGSALALRGDTSRAVTLYGIEPEIYFKIVKVPDFIVAGEAQVTT FT EGILIGIELARDLGASLGDKIIVSTPLAGNRILTIKGIFDFGNKAANQRNTFVTLRNAQ FT SMLGLIGGVTSIDLTVEDIYAAETIAQEIQAMLQVKADSWIKTNAQFFTAVQAQQNSNT FT LIRLFVGLSVAFGIAAVLIVSVIQRSKDIGILRAMGTRRGQILRVFLIQGGLLAFVGSV FT LGSAFGALALFTWHRSARQVDGSELFPLILDPDLFVWAAVLATATGVAAAIAPALRAAR FT LDPVVAIRG" FT misc_feature order(86873..86941,87647..87715,87773..87841,87926..87994) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 88023..88703 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1650" FT /product="putative ABC transporter, ATP-binding protein" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1136" FT /db_xref="GOA:Q6N999" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:Q6N999" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27091.1" FT /translation="MADVLKLDGIRKSYNVGTPVETEVLHGIDLTMQRGDFLALMGPSG FT SGKSTLLNIIGLLDRPTGGRLLINGEDTGQLSDSALTHLRGHAIGFVFQYHYLISAFTA FT RENVMMPMLVDRGRPDAAMEKRADELLDRVGLSRWRNNSATNMSGGQQQRVAVARALAM FT DPDLVLADEPTGNLDTKSANDVFELMRQINRERGTTFLLVTHNDDLAERCDRIVRVVDG FT KIAG" FT CDS complement(88803..90020) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1651" FT /product="possible leucine/isoleucine/valine-binding FT protein precursor" FT /function="COGs COG0683" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q6N998" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27092.1" FT /translation="MRLFGLAAVVAATSLFAPGVALAQKSYGPGASDTEIKVGNFVPYS FT GPASAYGIVGQVQSAYVKMLNEKGGINGRKINFISYDDAYSPPKAVEQTRKLVEGDEVL FT FLYHTLGTPSNTAVMKYLNQKKVPQLMLSSGGTRFGDDPKTYPWTMPFNPPYQAEGRIY FT AKWIMATYPNAKIAVLVANDDYGKDIYKGVKDGFGAKTSMIISEATYDITDPTIDSQMA FT KLKASGADLFLNLSTPKFAALAIRKMGELGWKPVHVLNNVSSSVGAVIKPAGMEYAQDA FT ITANYVKDPTDPTWKNDPGVKEWDAFLEKYMPGADRSNGLLLYSYGAGQTLEYILRQAG FT DNLTRENIMKVATSLKGYAPASLLPGITMNTSPTDHFPIEQMQLMRFKGDRWEMFGDVL FT EARVTN" FT sig_peptide complement(89949..90020) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.992 atresidue 24" FT CDS 90622..91443 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1652" FT /product="possible flagellar basal-body rod protein FlgG" FT /function="InterPro IPR001444 COGs COG1749" FT /db_xref="GOA:Q6N997" FT /db_xref="InterPro:IPR020013" FT /db_xref="UniProtKB/TrEMBL:Q6N997" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27093.1" FT /translation="MGSLGALWTATTGLQAQSAAFENISGNVANAQTTAFKATNTAFSD FT LIYPPQVSDTVLWRSVLTNGQQGSISYDPVSTHMAIGGEGYFTVEAPSGVSASGQPTFS FT TSETTYTRRGDFELKNGYLVNGAGYYLMGAQIDPVTGAVGSTGPLQFDTSTALPDLGVL FT QSLSVSSSGKLQGTYSKGQTVDVASLSIASFAGQGFMKQGSGGTFSPTPQSGPALFVNA FT GTVVGSALEASNVDIADQMTTMVQAQQAYSACTRVVIASNEMMLTMTSLTI" FT sig_peptide 90622..90678 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.774) with cleavage site probability FT 0.466 atresidue 19" FT CDS complement(91544..91942) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1653" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N996" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27094.1" FT /translation="MTSPHFHAVIWIDHREARVFHFNPAEADKLVVHADNPNRHVHHHR FT AVGSGHEPVDEHFLHAAMEAIADAGIVLIVGPAQTKHALEKYIADHNPALKAKIAAVET FT VDHPSDGQIVAHARKYFKAEDRTTPQAR" FT CDS complement(92077..93090) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1654" FT /product="putative oxido-reductase" FT /function="InterPro IPR001395 COGs COG0667" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N995" FT /db_xref="InterPro:IPR001395" FT /db_xref="UniProtKB/TrEMBL:Q6N995" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27095.1" FT /translation="MDYRSLGRSGLKVSPLCLGTMMFGGATDEPTSARIIDKARNAGIN FT FIDTADVYSMGASEQVVGRAIAAHREHWILATKVANPMGDGPNRAGLSRRRVLQAADDS FT LKRLGTDWIDIYYLHREDHATPLDETVRAIGDLIRAGKIRYFGVSNYRAWRVAEICNIC FT DRLGIDRPVVSQPYYNAMNRMPEVEHIPACGFYGLGIVPYSPLARGVLTGKYAPDVQPD FT KDSRAGRADKRMLQTEWRPESLKLAQQIRAHAEAKGATAVQFAVGWVLNNALVTSVIAG FT PRTEQQWDDYVRALDYRFTSDDEALVDALVASGHPSTPGYNDPAYPIEGRTVRHAG" FT CDS complement(93251..94459) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1655" FT /product="possible urea/short-chain binding protein of ABC FT transporter" FT /function="COGs COG0683" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N994" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27096.1" FT /translation="MIARSIAAAMMTAALLSSSIARAQVSDDVVKLGVLTDMNGPASTP FT TGQGSVTAAQMAVDDFGGTVLGKPIQVIVGDHQLKPDIGATLARRWYDVEQVDLILDVP FT VSAVGLAVQNIANEKKRLFITQSTGAADFHGKFCSPYAMQWVFDTHALAVGTAQEVVKR FT GGDTWFFITDDYAFGQSLEKDAAAMVTKTGGKVLGSVRPPFATSDVSSFVLQAQASKAK FT IIGIAAGPPNNVNEIKTGGEFGIFKGGQQMAALLALITDVHSLGLPTAQGLLLTTSFYW FT DMDDKTREWSKRYFAKMNRMPTMWQAGVYSATMHYLQAIKDAGTDDPLKVAAKMREKPV FT NDFFARGGKLREDGLMVHDLMLVQVKTPEESKYPWDYYKILAHIPGDAAFGPPDPACSL FT VKK" FT sig_peptide complement(94388..94459) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.984 atresidue 24" FT CDS 94562..95257 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1656" FT /product="possible urease accessory protein" FT /db_xref="GOA:Q6N993" FT /db_xref="InterPro:IPR011541" FT /db_xref="UniProtKB/TrEMBL:Q6N993" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27097.1" FT /translation="MFAILGLGFLLGMQHALEVDHIAAVSTIAARRSGVADIVKHGLTW FT GLGHTLTLFLFAGIALVIGQSIPEQIAQPLEGAVGFMLVALGGHLLWRLWRDRVHVHVH FT QHGDGVRHVHLHSHAERLSHDAPTAHRHEHGFRWRTLLVGLMHGMAGSAALLVLAVSQG FT PSPMQGLLYVALFGLGSMVGMGALSAVIAVPLVISARSLTTANRLLQGAVGILTIAIGL FT STIHATLLA" FT misc_feature order(94682..94750,94793..94846,94982..95050,95078..95146, FT 95183..95251) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(95286..96500) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1657" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160 COGs COG2199" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N992" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27098.1" FT /translation="MLSMPTLWIVFLINFVSLGLVWVHVTRNYPNFTPARYMTAACFVL FT ATGSVVGMLRIVINVELSLIGGGTLVVFACCLSAMGMYEFYGRRVPWMTSFIVTGTAAL FT GLTFFIFVVDSMAMRILVYSLAQLVPIALTLPLVTSKVGRRNPGARMAAVIACLIMAVY FT LVRSVAAIMGVGGELSLVHFNDFQSALVLALVFLSMTWNFAFLLMAIDRLRSEVENLAL FT LDDLTGISNRRHLLQRMSEQCTLSMSTGEPFAVLAIDLDGFKAINDGHGHAAGDECLRR FT FSRAAQSRLRPGDLLARAGGDEFCVVMPGTTLREGAMIARYILDESRAVSERGEAGIKI FT AASIGIAQWTPQIGQHPERLIAAADVALYNAKKLGKDRYAVYEPAPEPPPETHLPTPET FT LRKIA" FT misc_feature complement(order(95871..95936,95973..96038,96084..96140, FT 96162..96227,96240..96305,96327..96392,96423..96479)) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 97279..97641 FT /codon_start=1 FT /transl_table=11 FT /gene="ptpS" FT /locus_tag="RPA1658" FT /product="putative 6-pyruvol tetrahydrobiopterin synthase" FT /function="InterPro IPR007115 COGs COG0720" FT /db_xref="GOA:Q6N991" FT /db_xref="HSSP:1B66" FT /db_xref="InterPro:IPR007115" FT /db_xref="UniProtKB/TrEMBL:Q6N991" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27099.1" FT /translation="MKITQAFRFEAAHYLPNVPETHRCKRMHGHSYRVELQLSGPINPV FT TGFVLDFFEIEAAFGPLLKRLDHYCLNEVEGLENPTAENIAIWIWRRTKPELPQLCGVR FT VYETSDCWADYAGEDD" FT CDS complement(97708..98298) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1659" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR012312" FT /db_xref="UniProtKB/TrEMBL:Q6N990" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27100.1" FT /translation="MSRIIELLNDEHRNIARLLDVLEQELSVFDRRERPDYEIFQAIIQ FT YFKEYPEACHHPKEDVVYRILKERNPAVAGTVGDIEKEHELEVDRLANFAKVVDDVLAD FT QELPRQTFHAAARDFIEHQRRHMLKEEQLLFPAALETLTPEDWAKIDARIDDRKDPMFD FT GETASKFQNLYATILRWEQETAADRSKTSAVRA" FT CDS complement(98440..101361) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1660" FT /product="putative cation transporting P-type ATPase" FT /function="InterPro FT IPR001757:IPR005834:IPR006403:IPR006416:IPR007029 COGs FT COG2217" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N989" FT /db_xref="InterPro:IPR008250" FT /db_xref="UniProtKB/TrEMBL:Q6N989" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27101.1" FT /translation="MRDAEHAGHDASVENTGCCGSAGANAPATSSCCGGAGSVAAPNAA FT TAIDPVCGMTVDTATAQHRLDHDGQTYYFCCSGCRDTFSADPADVLAKAAKPFTLPPKP FT AAKLHQLTELPAKSSCCGRQGGDGHQHGEAPVAIKAIDPVCGMTVDVATSKHSFEHDGT FT TYHFCCGGCRTKFAADPQRYLAKAASSSCCGGADDHADHHHGAAADGGKVIDPVCGMKV FT DPATSKHRFAYKGTTYHFCREACQTKFAADPVSYLDKSKAKPAADVPEGTIYTCPMDPQ FT IRQVGPGTCPICGMALEPELVSLDDTPNPELVDMTRRFWIGLVLALPAIVLEMGGHLVG FT GHGLIDPVLSNWIQFVSATPVVLWAGWPFFVRGWQSVMTRNLNMFTLVAMGTGVAYIYS FT LVATVAPQLFPPAFRGHGSTVPVYFEAAAVITVLVLLGQVLELRAREATSGAIKALLGL FT APKTARKIDTDGSEHEVEIDSLSVGDRLRVRPGEKVPVDGTILDGRGTLDESLVTGESM FT PVSRETGGKVVAGTLNQSGGFVMRADQVGRDTMLSRIVQMVAQAQRSRAPIQRVADLVA FT GWFVPAVLLAAIAAFAAWAAFGPEPRLTFALVAAVSVLIIACPCALGLATPMSIMVGVG FT RGAQSGVLIRNAEALERMEKVDTLVIDKTGTLTEGRPSVVAIVAADGTDETELLRLAAS FT VERASEHPLADAIVRAAKQRNLDLGDVTDFDAPTGKGATGKIAGRTVVIGNPAYLASLG FT IDTASLAPKTEQLRGDGDTVVHVAIDGRFAGLFAIADAVKPSTPEALKALAADGIKVIM FT LTGDNRVTANAVARKLGIADVEAEVLPDQKSAVVEKLRQQGRVVAMAGDGVNDAPALAA FT ADVGIAMGTGTDVAMESAGVTLLKGDLGGIVRARKLSQATIRNIRQNLFFAFVYNSAGI FT PIAAGILYPSFSLLLSPIIAAAAMSLSSVSVIGNALRLRRTAL" FT misc_feature complement(order(98467..98532,98548..98604,99487..99552, FT 99571..99636,100036..100101,100147..100212,100252..100308, FT 100339..100404)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 101413..101688 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1661" FT /product="DUF156" FT /function="InterPro IPR003735 COGs COG1937" FT /db_xref="InterPro:IPR003735" FT /db_xref="UniProtKB/TrEMBL:Q6N988" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27102.1" FT /translation="MHKDIKASCQKRLGRIEGQVRGISKMVEEGRYCIDIVTQISAVRA FT ALRRVEEEVLKDHVAHCVEHAIASGDKADQRQKIAELMDVIQRSGR" FT CDS complement(101719..102399) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1662" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N987" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27103.1" FT /translation="MTGVSHLGMLQLAILIGIAAPASHAQAQWWPNKEPVDYEDCIAKG FT ETKATTPDVKAALQTQCDAKFAGRRKAGGGYTYFDFMQNRSFDIAGPNPTAAELRKIDE FT EYTAFLDERRRQMILAAFTAKQQQIAALQQQATATEPPPPLPKPRVVTVKPRDDADKPR FT VAADKSRPRAEKKRAERKRSPEPRYACGSNDPVSCGLTQLSAGFSAVKTSLFGTSTTTT FT AQRR" FT sig_peptide complement(102322..102399) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.780 atresidue 26" FT CDS complement(102507..103358) FT /codon_start=1 FT /transl_table=11 FT /gene="hpaD" FT /locus_tag="RPA1663" FT /product="putative 3,4-dihydroxyphenylacetate FT 2,3-dioxygenase" FT /function="InterPro IPR004183 COGs COG3384" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N986" FT /db_xref="InterPro:IPR004183" FT /db_xref="UniProtKB/TrEMBL:Q6N986" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27104.1" FT /translation="MGKLVLAAKVSHVPSLMLSETSDSPLRQARAGAVAALRELGRRAK FT EREVTTFVVFDTHWLSNFGYHINANAQHRGSFTSHEAPHMIQDLRYDLPGDPALAQAIA FT AEAQSHGLKVLAHQVPTLGLEYGTIVPMHYLNSDGWAKIVSIASPLFTSIEESRALGEA FT TRRAIDASDERVAILASGSLSHRLWPNKDLGPDAWTTIASEFNRQVDLRVLQLWQERRY FT REFTAMLPDYAVKCNGEGGMADTVMLFAALGWDDYTGEAEPLCDYFPSSGSGQVNVEFH FT VS" FT CDS complement(103386..103928) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1664" FT /product="Glyoxalase/Bleomycin resistance FT protein/dioxygenase domain" FT /function="InterPro IPR000486:IPR004360 COGs COG0346" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N985" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:Q6N985" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27105.1" FT /translation="MQIQQIHHVAYRCKDAKETVAFYGRVMGMELIGAIAEDKVPSTKA FT PDPYMHIFLDAGAGNILAFFELPNSPPMGRDPNTPDWVQHIAFQVDDVDALMAAKQRAE FT AEGLDVVGPTDHTIFKSIYFRDPSGHRLEVAAWTATPEQLAQMKSVAHAMVDEWAVTKK FT PPRHTAWLHQKEFADAE" FT CDS complement(104084..104386) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1665" FT /product="hypothetical protein" FT /function="InterPro IPR000104" FT /db_xref="UniProtKB/TrEMBL:Q6N984" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27106.1" FT /translation="MAHKLKVTDDMVAKAAAAFRAANGNELFCLRAALEAALANETFSV FT GDEVTTQGGATGIILSINGDEAQISWSCRGKTSTKLSELEHIEHAESVLADNRAA" FT terminator complement(104589..104614) FT /note="TransTerm prediction, 98+%" FT CDS complement(104641..105990) FT /codon_start=1 FT /transl_table=11 FT /gene="hemN1" FT /locus_tag="RPA1666" FT /product="putative coproporphyrinogen oxidase III" FT /function="InterPro IPR004558:IPR006638 COGs COG0635" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N983" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/TrEMBL:Q6N983" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27107.1" FT /translation="MSSALDKYAKSSVPRYTSYPTAPHFAKDFPESIYRGWLAQLDTDE FT PVSLYLHVPFCKQMCWYCGCNMKLAAKYDPVADYVEHLIDEIDLVADALPGTMPVRHLH FT FGGGTPTVIDPQDLGALMTLLRERFEFLPDAEIAIESDPRTLTEDMAAKIGELGFTRAS FT FGVQEFDPKVQEAINRVQPPEMVARAMQLFKSAGVERINFDLIYGLPYQTAEDLRRTVE FT QCVEMKPDRVALFGYAHVPWVAKNQRMIPDESLPKPELRATQAETAAEALVKGGYVRIG FT IDHFALPGDSLAIAAKTGELHRNFQGYTSDAAQTLIGLGATSIGRTPSGYVQNISETGA FT WSRAVEAGKIPVARGHALTQQDNLRAHVIERIMCDGKVDLAAAGKAFGCGEDWYAPEQD FT SLAELQRDGAVVCNGSKLTLTPEGVRLSRVVASVFDTYLRNSSVRHSIAV" FT CDS complement(106019..106681) FT /codon_start=1 FT /transl_table=11 FT /gene="bchJ" FT /locus_tag="RPA1667" FT /product="putative 4-vinyl protochlorophyllide reductase" FT /function="InterPro IPR004096" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N982" FT /db_xref="InterPro:IPR004096" FT /db_xref="UniProtKB/TrEMBL:Q6N982" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27108.1" FT /translation="MSEIGPNAVIQLIHALDAAGLQPAAKEIFSEAAASDWLAAPPSVM FT VDERPVAAIHQAVRRVLPQQQAAAVLADAGLRTGDYILANRIPKLAQAVLKIMPASIAA FT KMLTKAITAHAWTFAGSGKFSARAGKTVTFEIAANPLCAGEHADHNVCVWHASVFQRLF FT QSLVSPYTRVTETACGAHGDNCCRFVADWTSIPDAANIYASRRSEPIAGQSETLSAR" FT CDS complement(106701..108398) FT /codon_start=1 FT /transl_table=11 FT /gene="bchE" FT /locus_tag="RPA1668" FT /product="Mg-protoporphyrin IX monomethyl ester oxidative FT cyclase 66kD subunit" FT /function="InterPro IPR006158:IPR006638 COGs COG1032" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N981" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q6N981" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27109.1" FT /translation="MRILLIHPNYHSGGAEIAGHWPPAWAPYLAGALKANGFADIKFVD FT AMTEEISNEGLAKIISDYQPDLVGATSITPSIYAAEEALKVAKQVNPKIVTMLGGVHAT FT FMYQQVLSEAPWVDVIVRGEGEEIVVELARAVASGNWPANRSEIKGLAYTEGSNGESQI FT VATAAAPTVKDLDAIKPDWGVLNWNLYRYIPMNTRVAIPNMARGCPFTCSFCSQWKFWR FT DYRVRDPKKVVDEIQELVEKYDVGFFILADEEPTINRKKFIQFCEELIARGLNKKVQWG FT INTRVTDILRDEQLLKFYNEAGLMHVSLGTEAAAQLKLDLFNKETKISDNKKAIRLLRE FT AGIVVEAQFIVGLDSETPETLEETYRMAMDWKPDLANWSMYTPWPFTPLFKELSDKVEV FT FDFAKYNFVTPIVKPAAMERGELLDRVMNNYRRFYMYKAFFSYPWSGTGRRRRYLLGCL FT KAFLKAGFERKFYDLGRVGYWGPQSKKKVDFQFDTTRKISHAQMADWEANADRSRKAAA FT SQMAIVSACGGGTDQMEESEADAKAALAKTVTSRVADSTHDAGSVTRH" FT CDS complement(108556..108984) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1669" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N980" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27110.1" FT /translation="MTAPGKPTKTAPVTEAVADVVREWEEIAGSPSELEAFGRAMANMV FT KDLGLSPAEVRALATKGTSAKELPCLLEALRISIRALAEKEPMLLNDLRRTCAVCDHKL FT ECDADIAAGTLIPSYQRYCLNVDTLDALSHDTNFVAES" FT CDS 109206..109946 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1670" FT /product="Metallo-phosphoesterase" FT /function="InterPro IPR004843 COGs COG0639" FT /db_xref="GOA:Q6N979" FT /db_xref="InterPro:IPR011152" FT /db_xref="UniProtKB/TrEMBL:Q6N979" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27111.1" FT /translation="MLLGLFADIHANRPAFTACLANARERGIERVVLLGDYVGYGADPD FT WTVSTVRDLVADGAVAVLGNHDAAIGNPKVQMNAEAEAAIEWTRGQLDSAQRKFLADLP FT MRQEEHSLLFVHSEATRPESWIYVTDTAIASRSMQSVSAHVTFCGHVHKPALYSLSVTG FT KMTTFVPTTDVPVHLLPGRQWHAVLGSVGQPRDGNPAAAYALYDTVKHELTYCRVAYDA FT SEAARRIRDNGLPLWLADRLLVGR" FT CDS 109950..111389 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1671" FT /product="putative serine/threonine protein kinase" FT /function="InterPro IPR000719:IPR001245:IPR002290 COGs FT COG0515" FT /db_xref="GOA:Q6N978" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q6N978" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27112.1" FT /translation="MDEVTFEPGSTIDGFIIEEAIHRGGMATLFKVRRDDDPTPMVMKI FT PRIGEGEDPAAIVSFEMEQMLMPRLSGPHVPKFVAMQDFSTQPYIVMERIAGEPLLARL FT PELPLGYDEAVAIAAKIATAIADLHRQHVIHHDIKPSNIMFRPSGEAVLLDMGLACSDQ FT LPDLMQEEFRLPFGTAPYMAPERLLGVRDEPRSDLFALGVLLYFFTTGVRPFGETETMY FT GMRRRLWRDPHPPRKLRPDYPLWLQEIVLRCLEIEPAWRYPTAAQLVFDLTHPSEVKLT FT TRSEKLKHDPLRTVLRRRFNKELTRPRAVESMAAHLASAPIVAVAIDVAEGSGALNDAL FT RTTASRILATLPSARLACLNVLKLGRMTIDRTLDEHGHNKHVDRLVQLRHWAEPLKLED FT DRLTVHVLEAVDPASAILEFAQASRVDHILIGARRSSVLRSLLGSVSAKVAGEASCTVT FT IVREPQLASPRSGPRAGAQDA" FT CDS complement(111435..112085) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1672" FT /product="conserved hypothetical protein" FT /function="InterPro IPR007055" FT /db_xref="InterPro:IPR014004" FT /db_xref="UniProtKB/TrEMBL:Q6N977" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27113.1" FT /translation="MSESQLRQNILDEFEFDPSFNSGHIKVAVEADRVILSGHVMSYAD FT KVAAIAATRRVKGVHAITDHLEVRSPFNRTADDQIAQRACDLLEWNVLVPSSSVDVQVE FT NGWLTLSGTVDWHFERAAAEDDVRKLAGVMGVTNNIVINNPLADHSCIRDKIESALRRH FT AEIGSKTIRVTVKNGNIVILEGRVDTWDERRAAQNAAWSTPGVAAVDDRLMIN" FT CDS 112464..114815 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1673" FT /product="D-xylulose 5-phosphate/D-fructose 6-phosphate FT phosphoketolase" FT /function="InterPro IPR005593 COGs COG0021" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N976" FT /db_xref="InterPro:IPR019789" FT /db_xref="UniProtKB/Swiss-Prot:Q6N976" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27114.1" FT /translation="MSDVLSNDLLQKMDAYWRAANYLSVGQIYLQDNPLLDQKLQLDHI FT KPRLLGHWGTTPGLNLLYVHLNRLITEHDLDMIYITGPGHGGPGLVANAYLEGTYTERY FT PAIERSRNGMQRLFRQFSWPHGVPSHVSPETPGSIHEGGELGYSLAHAYGAAFDNPNLI FT VACVVGDGEAETGALATSWHSNKFLNPARDGAVLPILHLNGFKIANPTVLARITPQELT FT DLMRGYGYEPHFVEGDDPAVVHQTLAATLERVLGEIRAIQDKARNHGDTERPRWPMIVM FT RTPKGWTGPKQVDGKPVEGTWRAHQVPIADFKNPEHLTLLEDWMRSYRPDELFDATGKL FT RDELQALAPTGRRRMSANPHANGGELLEPLSLPDFHDYAVTLTGPGALKAEATRVLGTF FT LRDVMKNSLESENFRLFGPDETASNRLDAVLQVSPKEWMAAIEDVDVDLSPDGRVMEVL FT SEHLCQGWLEGYLLTGRHGFFSCYEAFIHIIDSMFNQHAKWLKACATIPWRKPIASLNY FT LLTSHVWRQDHNGFSHQDPGFIDHVANKKSNVVRIYLPPDANCLLSVADHCLRSRNYVN FT LIVAGKQPEWQWLDIDAAVRHCTTGAGIWHWASDEGEPDVVMACAGDVPTVETLAAVKL FT LREYVPDIKIRVVNVVDLMVLQPSSEHPHGLDDRRFDELFTTDKPVIFAFHGYPWLIHR FT LTYRRRNHVNIHVRGYKEEGTTTTPFDMVVLNDLDRYRLALDAILRIPRLADQRDAATS FT RYWATMQRHKLYIGEHGDDLPEVRDWRWSA" FT CDS 114993..115496 FT /codon_start=1 FT /transl_table=11 FT /gene="cheY3" FT /locus_tag="RPA1674" FT /product="response regulator receiver, CheY3" FT /function="InterPro IPR001789 COGs COG0784" FT /db_xref="GOA:Q6N975" FT /db_xref="InterPro:IPR001789" FT /db_xref="UniProtKB/TrEMBL:Q6N975" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27115.1" FT /translation="MRREQRTEAEQNGIHADKLLGLLDLLVIDDDATQRMLIAGAAEKA FT GYAVTHAASCAEGIGLIRVKHFDCITLDLKLEDGDGADVMRAMAAAKYEGPMIVISGMS FT SPHRRASRDLARSLGMELLQSFPKPIDLAALRISLANLRSTVAGLPIVHSWGEVCGPRF FT ERNG" FT CDS 116143..118293 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1675" FT /product="methyl-accepting chemotaxis receptor/sensory FT transducer with PAS domain" FT /function="InterPro IPR000014:IPR000727:IPR003660:IPR004089 FT COGs COG0840" FT /db_xref="GOA:Q6N974" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q6N974" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27116.1" FT /translation="MRNNLPVTDDEYVLDDGTLIVSKTDVKGRLTYFNEQFVKASGFSE FT QELMGQPHNIVRHPDMPPEAFQNLWDTLKAGRPWVGAVKNRRKNGSFYWVLASATPLWE FT NGQVTGYMSVRTKLPADQRAEAEHVYALLRNNKAHGYKIDDGIIRRRSWFGRLGMFTRT FT LRLRLTTMVAVQAVIMMIIGAAGIFAVHNMDQRLQSVYEDRAVPLGQLTAINERLLDDA FT MALRGAVVRAKVGKQIRDVAGRIAANRERSDQLFADYTATRLTAGEKAVADAFSAARQA FT YFDEVVGPGVGMVAAREFDRLGELMTGRAEDLFRAAKTELDKLVALQVQGARDEYSSGQ FT REYVTMLAISITLLLIGLFLGVLNGVFTTRAITVPLRRLNTVMSNIAQGKFDSRVVIER FT DDEAGVALRNIQAMQNQLFFSREEEKDAAQRTALQRKLDMLQLANEFEAAVGEIIETVS FT SASTELEASASSLTSTAERSRELTVTVAAASEQAASNVQSVASATEQMSSSVSEISRQV FT QESARIAVESVNQARHTNDRVSELSQAAGRIGAVVELINNIAGQTNLLALNATIEAARA FT GEAGRGFAVVAQEVKILAEQTAKATGDISQQISGIQAGTEESVAAIRQIGITIDRMAEI FT ASTVASAVEEQGAATQEIARNVQQAAHGTIQVSSNIASVRQGAAETGSASSQVLAAAQA FT LSHDSNRLKTEVSRFLSTVRAA" FT misc_feature order(116644..116712,117181..117249) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 118472..121285 FT /codon_start=1 FT /transl_table=11 FT /gene="cheA3" FT /locus_tag="RPA1676" FT /product="multidomain chemotaxis histidine kinase CheA3 FT (Hpt, CheA, CheW, & Resp. Reg. Rec. domains)" FT /function="InterPro FT IPR001789:IPR002545:IPR002570:IPR003594:IPR004105:IPR004358 FT :IPR005467 COGs COG0643" FT /EC_number="2.7.3.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N973" FT /db_xref="HSSP:1B3Q" FT /db_xref="InterPro:IPR008207" FT /db_xref="UniProtKB/TrEMBL:Q6N973" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27117.1" FT /translation="MDDLLREFLTETFESLDTVDNQLVRFEQEPNNAKILDNIFRLVHT FT IKGTCGFLGLPRLEALAHAAETLMGKFRDGMPVTGEAVTLILTTIDRIKDILTQLEATQ FT AEPEGEDGDLIGELERLSMRSPEEIAAELGGAAPVEVAEVEAPAEAVVAEAADANSTEG FT TLVAQTLERPLRPGEVSLDELERAFRETEIEMASPPLQPAVSEAPAAVAEAAPPEPKPA FT KPAKPAAKPAAKKSGGEGEGAAEGGAAGGVANQSIRVNVDTLEHLMTMVSELVLTRNQL FT LEISRRHEDNEFKVPLQRLSTVTAELQDGVMKTRMQPIGNAWQKLPRIVRDLAAELGKQ FT IELEMHGADTELDRQVLDLIKDPLTHMVRNSADHGLEKPEDRARAGKPEQGTIRLSAYH FT EGGHIVICIADNGRGLDTERIKAKALANGLVTEAELEKMTEAQIHKFIFAPGFSTAAAV FT TSVSGRGVGMDVVRTNIDQIGGTIEVKSVAGEGSAITIKIPLTLAIVSALIVEAGGDRF FT AIPQLAVVELVRARANSEHRIERIKDTPVLRLRDKLLPLIHLKKLLGIDEGANSEPENG FT FIVVTQVGSQTFGIVVDGVFHTEEIVVKPMSTKLRHIGMFSGNTILGDGAVIMIVDPNG FT IAQALGTAVSAQHDISDQAAASRNASAEQLTSLLVFRAGSSQPKAVPLSLVTRLEEIAS FT DKIEMSNGRYMVQYRDQLMPLVLMEGVEVATSGVQPILVFADEDRSMGLVVDEIVDIVE FT EHLHIQVGSSREGILGSAVIKGQATEVIDVAHFLPMAFSDWLARKEMKQSLTTRSVLLV FT DDSAFFRNMLGPVLKAAGYKVRVATSAVEGLSVLRSGAQFDVILTDIEMPEMNGFEFAE FT AIRSDTKMSNLPVIALSSLVSPAAIERGRQAGLTDYIAKFDRPGLIAALKEQTTMHATP FT EVLEQAA" FT CDS 121282..121782 FT /codon_start=1 FT /transl_table=11 FT /gene="cheW3" FT /locus_tag="RPA1677" FT /product="chemotaxis signal transduction/oligomerization FT protein CheW3" FT /function="InterPro IPR002545 COGs COG0835" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N972" FT /db_xref="InterPro:IPR002545" FT /db_xref="UniProtKB/TrEMBL:Q6N972" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27118.1" FT /translation="MSETRKDTPAMSRTIDAISGNTTQFATAMIGGQLFGLPISRVQDV FT FMPERLTRVPLAPDDVAGVLNLRGRIVTAIDMRARLGLPKNQDGKPPMAMGVDLRGESY FT GLLIDSIGEVLTLPDEGRETNPVNLDPRMASFANGVHRLDGQLMVVLDVDKVLEIATQR FT MAA" FT CDS 121836..122711 FT /codon_start=1 FT /transl_table=11 FT /gene="cheR3" FT /locus_tag="RPA1678" FT /product="chemotaxis methyltransferase, CheR3" FT /function="InterPro IPR000780:IPR001601 COGs COG1352" FT /EC_number="2.1.1.80" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N971" FT /db_xref="HSSP:1AF7" FT /db_xref="InterPro:IPR000780" FT /db_xref="UniProtKB/TrEMBL:Q6N971" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27119.1" FT /translation="MTPLDYEYLQKLLKDRSGLVLSADKKYLLESRLLPLARKAGVPGI FT TDLVQKMKAGSDSLINDVVEAMTTNETFFFRDKTPFDHFKDSVIPELIKARAGRKSLRI FT WCAASSTGQEPYSLAMLLKEKASELAGWRIEIVATDLSPEVLEKSKAGLYTQFEVQRGL FT PIQLLVKYFKQVGTMWQLNADVRSMVQYRLFNLLQDFTALGKFDVIFCRNVLIYFDQAT FT KSDIFNRLMKVNEPDGYLFLGAAETVVGLTDSYRICPKRRGVYLPNSSAASTAPGLALG FT GLKTSALTGR" FT CDS 122723..123037 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1679" FT /product="unknown protein" FT /db_xref="UniProtKB/TrEMBL:Q6N970" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27120.1" FT /translation="MASESGGPERVSFGRGYNVWIMGIDGTWRRNCVLKAVSSVDAELE FT LEGSIEGLNLKEFFLLLSSTGLAYRRCELIRVNGSEIDVRFLSTRNKSVKPSSRDDRMA FT " FT CDS 123266..124516 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1680" FT /product="putative response regulator and cylclic FT diguanylate phosphodiesterase (EAL)" FT /function="InterPro IPR000169:IPR001633:IPR001789 COGs FT COG2200" FT /db_xref="GOA:Q6N969" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q6N969" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27121.1" FT /translation="MVDPTNHNPAIDVLVVDDDPVQGAIVSGVCTKLGYRPHFASSYHE FT AAARLATGRFDYITIDLSLGDHDGIELLRLIAETGAKPRRIIVISGCEERILNATVRMA FT HAVGMLDTISLPKPIDLALLRGALAPFQEAAASRRGVDSRLSEITADDLRRGLDRGEVY FT AAFQPKIDLSTGKVTGCEALARWDSATFGPVGPDVFIPLAEQGGLIKTMTLRMLRDSMT FT FAAAFLPTEPKFVVAVNLSATLLSDTSLPEEVERLLAEIGVPARSLMIEVTETTAMADV FT GRAMDVLLRLRLKGIGISMDDFGTGYSSLSALARMPFSELKIDRSFVKDCLTDADMWKI FT VSSSVAIAHQYNMKVVAEGIEDAATWHALDALGCDIGQGFEFSRALRQDAFVEWYHGWM FT ARPPATRAAVVPLQREA" FT CDS complement(124547..127138) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1681" FT /product="sensor histidine kinase with a response regulator FT receiver domain" FT /function="InterPro FT IPR001789:IPR002570:IPR003594:IPR003661:IPR004358:IPR005467 FT COGs COG0642" FT /EC_number="2.7.3.-" FT /db_xref="GOA:Q6N968" FT /db_xref="HSSP:1AB6" FT /db_xref="InterPro:IPR003594" FT /db_xref="UniProtKB/TrEMBL:Q6N968" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27122.1" FT /translation="MLPPTRPNLKRSLVALRVTTIVLIATIVGTNLIFLGNLRESTLQT FT AETNLERYTLTLAEEADRSLKSMDLLLSSVRDYVSRAGVTDSESYRRLMSQQSVYSLLS FT EKITGMPQVDAVTMIDETGKLINFSRYWPIPDVNISDRDYFRALSSDSTLSTFVSAPTR FT NRGSGTWNIYLAQRLNDTRGGFIGLLLGAISVQYFENFFAATSPGAGTEIALLRSDGTL FT LVNYPHSDKLGTVVTDAGRLALAAGSRQREAGNSNKQIRVTRMLPNYPIVVRVTQPEDS FT ALQNWQDMAVLMIAMSVISALVIITGSVAIARWWGKQHLYAEAAEAASAAKSSFVAMMS FT HEIRTPMNAVIGLATNLLETRLDAEQRQAVTSIHDAGDNLLQILDDILDFSKLEAGRLS FT LEPIPFAPRNIVDNTLSVIGPRAIAKGLVIRLEARGDIPEALTGDAGRIRQVLLNLISN FT AVKFTTAGEIVITTECISRDTTNARMRWIVTDTGIGIAADKIDSLFKDFVQADSSISRR FT FGGSGLGLAISKRLIEQMGGKIGVSSAPGRGSEFHFSLTLPIADHAAPPEQDDQDVYAQ FT FRARIEAAGRPLRILVVDDNPTNRAIATQMLGEFRVQTNTACDGTEAVTAATRFGYDVV FT LMDVRMPEMDGLDATRAIRSHGGALANVPIIAFTANAFAEDAAACRAAGMNDHVAKPVR FT KKALIEAILRALPPLPAAESPRIVPVPAPLAPPPADNSDQTEVPSDVAGAGQIYVGRKA FT FGHLVEEIGEDATLAVLSVFARDTEARIALFDTLDIANERRRIEREAHSLKSAAATFGL FT DTLSGLARELEHAAPHLTQAEYVAMTRQIKAAFSAARRVPADDNQLVELAG" FT misc_feature complement(order(126203..126268,127034..127099)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 127561..128187 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1682" FT /product="ptwo-component transcriptional regulator, LuxR FT family" FT /function="InterPro IPR000792:IPR001789 COGs COG2197" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N967" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q6N967" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27123.1" FT /translation="MNEQAAGGEVFVVDDDPAVRETLSIVLSAAGYQVICFADGESLLA FT VARSRSPACILLDVHIPGRSGLDILAELHAEDYPAPIFMISGKGDIAMAVNAIKNGALD FT FIEKPFRGKEIVSRVEEAIEAFSRRRDAGQGSKAPSYNFPGKEPLTLREREVLELFSAG FT NTNKEAGRQLGISPRTIEYHRANIMKKLGARNATDLVRIVMTAPK" FT CDS complement(128238..129020) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1683" FT /product="3-oxoacyl-acyl carrier protein reductase" FT /function="InterPro IPR002198:IPR002347 COGs COG1028" FT /EC_number="1.1.1.100" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N966" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N966" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27124.1" FT /translation="MDLGIKGRRALVCASSKGLGRGCAAALAAEGVHVTMTARGAEALA FT QAAAELRKAYPDVEIIEVAGDITTPEGRAAALAACPEPDILINNAGGPPPGDFRNWTRD FT DWIKALNANMLTPIELIKATVDKMIERKFGRIVNITSAAVKAPIDVLGLSNGARSGLTG FT FVAGLSRKTVRHNVTINALLPGPFDTDRLRGVAAGQAKASGKPAEQILEARKNENPAGR FT FGTPDEFGAACAFLCSVHAGYITGQNLLLDGGAFPGTM" FT sig_peptide complement(128934..129020) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.837) with cleavage site probability FT 0.830 atresidue 29" FT CDS 129129..129890 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1684" FT /product="putative 3-ketoacyl-acyl carrier protein FT reductase" FT /function="InterPro IPR001092:IPR002198:IPR002347 COGs FT COG1028" FT /EC_number="1.1.1.100" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N965" FT /db_xref="HSSP:1AE1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N965" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27125.1" FT /translation="MDPLFDVSNEVILVTGASQGLGRQFARVLAARGAAIVLAARQIDK FT LQSLEQEIEGGGGRAVAVRMDVTDLGGMAAALDQAEAALGPITVLINNAGVATEKLAID FT TSEADWDKVIGANLKGAYFLATEVARRMIARQQGGNIVNIASVLGQSVLKFVSPYAISK FT AGIIQATKAMALELASSRIRVNALAPGYIDTDINRDLWSTPAGEKLLKSIPQRRVGHES FT DLDGAILLLASNASRYMTGSVVTVDGGFLLG" FT CDS 130374..134474 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1685" FT /product="possible serine protease/outer membrane FT autotransporter" FT /function="InterPro IPR003368:IPR005546:IPR006315 COGs FT COG1404" FT /db_xref="GOA:Q6N964" FT /db_xref="InterPro:IPR003368" FT /db_xref="UniProtKB/TrEMBL:Q6N964" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27126.1" FT /translation="MAYKRTRSTDIQVLLAGGSRVGARSIAALLRAITVMTTLTVPAMA FT DGGAGGQGGDSSAAGGIGGSGYVGASGGSSGPSTTAGSGGGGGGAAGGGSGGSSGNTDS FT VGGAAGGTTPGQDGSNGTTAASPSGGGGGAGGNNGNVATAPFSNAANSTGQNGGKGGNG FT GAGTDSGSTGGGGGGGGAGGVGFVFSDSSSFTNFNVTIQGGAGGAGGAGGSAAAANGNG FT GAGGDGGTGLLLTSPGATVTNRGTIKGGTGGVAGAAGAGTGTAGAAGAAGAGGAGIVGS FT GLTIINSGSIQGGVAGDGTQANSITFTGGDNTLKFMSAGAGVRGAIGLATSSTTLTIEQ FT SANSTLDQMITGAGSVAKTGSGVLTLTGSNSYLGGTTISAGTLQIGNGGNTGSITGDII FT NNASLAFNRSGTYTFDGAISGTGGVSKTSNGTTVLTGTNTYTGGTTISAGILQVGGGGS FT TGSITGDIINRGSLRFKRSDAYTFGGAISGTGAILQDGDGVTILTGTNTYTGNTAISRG FT KLQIGDGGTTGSITGGVTNNSELWFNRSDTYTFGGVISGSGRVSQLGPGTTVLTGKSTY FT TGGTTISAGTLQIGNGGTTGSIANNVNNAGTLAFNRSDAYTFGGAISGTGSVSQLGSGN FT LTLSGANTYIGGTTISGGTVTVGNNSAFGTGDVKTTQGATVAFGAADYTLANNFVVSGT FT SIFDIQTGTTQTITGAVSDGDTAGIIEKNGGGKLILNGRNTFSGGTIINAGTLQLANSN FT MLSATTAATVASGTTLDLGGFNQTIGSLAGAGSVALGAALLTTGADNSSTNFSGTMSGT FT GGLTKQGTGNLILSGTNDYTGPTTVNAGTLSVNGSIASAVTAASGGRLGGSGSVGSTTI FT ASGGTLAPGNSIGTLTVNGDLTLAAGSSYAVEVSPTASDRTNVTGRATLAGTVQASYAT FT GSYISKRYTIVNAGGGVAGTFGALVDTNLPANFRSALAYDANNAYLDLMLAFVPPTAPD FT YGNGLSRNQQQVVGALVNSFNVAGGIPTTLGTLRPDGLSQASGEAGAALQQSLFGSADL FT FMRSVFSNALDPTDGSAGRECAAPGSQAGPRDACAALPPAAASASRWSAGYGGTLRVGG FT DASTGSHDTTSRVAGAAAGASYQVSPQARVGFALGGSGSSFSLAQGLGSGSSDSFNAAL FT YGRYQLGPSYLAAALGYVWQDATVDRTVTVAGGEALRARMHPQALTARVEGGQRLQVSG FT IGVTPYAALQTTTMFLPTFGETGTSVFALDYAGRQSTVTRSELGARFDDEVFIDGRPLA FT LRARAAWAHGWNTDWQAAATLRQIPAAQFNVYGAALPGDSVQVSLGASLGLGRGWTVSA FT AFDGEFWKHAESYAGRALVSYQW" FT sig_peptide 130374..130511 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.663) with cleavage site probability FT 0.639 atresidue 46" FT CDS complement(134627..136231) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1686" FT /product="putative alcohol dehydrogenase" FT /function="InterPro IPR000172 COGs COG2303" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N963" FT /db_xref="InterPro:IPR012132" FT /db_xref="UniProtKB/TrEMBL:Q6N963" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27127.1" FT /translation="MSETVDFVVVGGGSGGCAVAGRLSEDTNTSVALLEAGGTADNWVV FT KTPYALSLMVPSKLNNWHFETVPQPGLNGRVGYQPRGKGLGGSSAINAMVYIRGHKWDY FT DHWAELGNAGWSYADVLPYFKRSENNSDFNGAYHGQSGPLHVNKLRTDNPAHEIFLQAA FT REAQFRIRDDFNGEEQEGLGLYQLTQHDGERWSAARAYVHPHIGTRCNLRVETDAQATR FT ILIEGGRAVGVAYRQNDQIREIRARREVILASGAFQSPQLLMLSGIGDAAALKAHGIDV FT VHHLPGVGQNLQDHPDFIFAYQSDSPYFTGTSFTGIARLLSTIGQYRREGRGPLTTNFA FT ECGGFLKTRPDVDVPDIQLHFGMAMVDDHGRKRHWGTGFSCHFCLLRPKSRGSVGLASA FT DPLAPPRIDPNFFGDPDDLETMVAGYKTTQRLMETPALRALQQKDLFTANVRTDDDIRA FT ILRARVDTVYHPVGTCKMGSDATAVVDPRLNVHGIGALRIVDASVMPTLIGGNTNAPTI FT MIGEKAADMIREEMRAN" FT CDS complement(136302..137735) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1687" FT /product="putative aldehyde dehydrogenase" FT /function="InterPro IPR002086 COGs COG1012" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N962" FT /db_xref="HSSP:1AD3" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q6N962" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27128.1" FT /translation="MDQPIGGFGGNALHDSFHRMFEISRAEPPPTLEQRQDRLARLRAL FT IKDNEKRFEQAISADFGHRSSTETLIAETLSLLGDIKHTSRHLKRWMAPRKVSTQLQFL FT PGKNRLLPQPLGVVGVIAPWNYPLQLTVAPAIGAIAAGNRVMIKPSELSPHFAALLQET FT VAAKFDASEMMVTGIEAGVAEAFARLPFDHLMFTGSTRVGRIVAAEAGKNLTPVTLELG FT GKSPTIVDRSADLDEVAPRIAYAKLMNAGQTCIAPDYVLAPQDRVEALAGKIWGAMQQM FT WGTDPANPDYTSIIAEHHYARLKSLVDDAVARGARLLQPASADDAAWAGKRKFPPTLVL FT GATHEMKIMQEEIFGPLLPILGYSEPTEPINFINGRDRPLALYWFGTDDTARDQVLERT FT VSGGVTINDCLVHFAQANQPMGGVGASGTGAYHGEWGFNTFTKMKPIFYRSPYNRFADL FT YPPYGAKIARLSKVLRLMS" FT tRNA 138026..138102 FT /gene="tRNA-Met3" FT /locus_tag="RNA_14" FT /product="tRNA_Met" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 138321..138842 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1688" FT /product="GCN5-related N-acetyltransferase" FT /function="InterPro IPR000182 COGs COG0454" FT /db_xref="GOA:Q6N961" FT /db_xref="InterPro:IPR000182" FT /db_xref="UniProtKB/TrEMBL:Q6N961" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27129.1" FT /translation="MTAFANAPRPLSEADDRDGFDCGRESLNAWFRWHPWANHVSGASR FT VNVMTDPKSHRIFGHVTLSACQIERAYLPKPQQCNQPDPVPVLLLGQLAVDKAYQGRGH FT AASLLQFALKSALRVAEIVGCVGVVTHPLDGGVRGFYARWGFRDLPFDPRRTMIIRMSE FT LEQHFGVATG" FT CDS 139169..140332 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1689" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N960" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27130.1" FT /translation="MSAGDSGGFYQSVAVFRGFRSLMDPALYAPLPDDWTIGVADIVDS FT TRAIAEQRYKSVNMAGAAVIAAVTNALQGREFPFVFGGDGAGFAVAPADLAAARDALAA FT TAAWVRDELGLTMRIALVPVAAIRAKGLEVRVARFAPSPHVSYAMFAGGGLGWAEAAMK FT RGEFSIPPAPPGTAPDLSGLSCRFEEMPARRGVILSVLIMPTAQADPAAFRILIEDIVS FT LIERSPEAGRPVPSEGPRLRWPPQGFDLEARAERGGSLTLRRAALLVQTLFSYLIMRLG FT ITVRGFVPRAYLTELVENSDFRKYDDGLRMVVDCAPELADALEQKLATAAAAGVARYGV FT SRQQSAMVTCFTPSVTRSDHVHFIDGAGGGYASAALALKAMPDRAVA" FT CDS complement(140329..140769) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1690" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR019223" FT /db_xref="UniProtKB/TrEMBL:Q6N959" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27131.1" FT /translation="MAVRSGFVVAALVALALSPTGAIAQSAGPQGTWLTQAGDAKVRIK FT SCGNALCGSIVWLKTPIDPNTGKPQVDDKNADPQLASRPIIGLQIFGDMRPVSQGKWSG FT HIYNADDGKTYESSISHTGPTSLRVEGCVGTLCGGETWTLTR" FT sig_peptide complement(140695..140769) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.942 atresidue 25" FT CDS complement(140901..142274) FT /codon_start=1 FT /transl_table=11 FT /gene="matE3" FT /locus_tag="RPA1691" FT /product="probable cation efflux pump (multidrug resistance FT protein)" FT /function="InterPro IPR002528 COGs COG0534" FT /db_xref="GOA:Q6N958" FT /db_xref="InterPro:IPR015522" FT /db_xref="UniProtKB/TrEMBL:Q6N958" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27132.1" FT /translation="MTIEAPADTPLPAPPPNRLLTAPILPTLVRLAIPNTIAMLGTALV FT AVAETSYIGRLGTEPLAAIALVFPFAMLTQMMSAGAMGGGVSSAISRALGAGDTHRAGV FT LALHAILIGIGGGLMFTLVMLLFGRPLFALLGGRGDVLEQACSYSVVLFSGAVSIWLVN FT TLASILRGTGDMILPAGALLGVAALQVVIGGALGLGLFGMPRLGMPGVASGQAIAFTIG FT SMFLLIYLASGRSRLRLQLRAFSFQRPIFVDILKIGALACLAPLQSVLTILIFTKVLAS FT YGTTTLAGYGIGSRLEFLLIPIAFAVGVASIPMVGMAIGAGDIARARRVAWTAGVVSAV FT IVGLVGAVLAIWPALWVSLFTADPAVTAAAHTYFHLAGPGFGFFGLGVTLYFASQGAAK FT VGGPVLAATGRLVLVALGGWALVAFGAPASAMFAMVAVAMVVYGLGSAAAIYLTRWVK" FT misc_feature complement(order(140913..140978,141009..141074, FT 141096..141161,141207..141272,141312..141377, FT 141447..141512,141576..141641,141681..141746, FT 141768..141833,141894..141959,142020..142085, FT 142116..142181)) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 142549..143784 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1692" FT /product="putative transmembrane transport protein" FT /function="InterPro IPR007114 COGs COG0477" FT /db_xref="GOA:Q6N957" FT /db_xref="InterPro:IPR011701" FT /db_xref="UniProtKB/TrEMBL:Q6N957" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27133.1" FT /translation="MKAAQLSAFQRWSILIGASVLLSLAMGMRQSFGLFQPSVIRDVGI FT TSADFSFATALQNIIWGVTQPMVGLIADRYGTRWVMAGGVIVYAAGLVLMMVADSALMF FT TLGCGVCVGIALSCTASSMTMTVTSRTVSPAKRSVAMGAVSAAGSLGLVLASPLAQTLI FT STAGWQMALIGFLGLAAAMLPSALFAGRADKLDIDKSDDVQQSAGEVVQTALGHSGFLV FT MAIAFFVCGLQLVFITTHLPNYLAICGLDPSLGASALAVIGLFNVFGSYAFGWLGGKFP FT KQYLLGGIYIVRSLTVAAYFYFPASATSTIVFAAIMGSLWLGVIPLVNGLVAQLFGLRY FT MATLTGIAFLSHQVGSFLGAWGGGVIYDHLGSYDRAWQAAVLIGLIAGCAQMLMNVRPP FT RRRDELAVPATA" FT sig_peptide 142549..142650 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.918) with cleavage site probability FT 0.476 atresidue 34" FT misc_feature order(142585..142653,142696..142764,142783..142842, FT 142852..142911,142969..143037,143050..143118, FT 143200..143268,143311..143379,143398..143466, FT 143479..143547,143566..143634,143677..143736) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 143986..144582 FT /codon_start=1 FT /transl_table=11 FT /gene="sodB" FT /locus_tag="RPA1693" FT /product="superoxide dismutase" FT /function="InterPro IPR001189:IPR001687 COGs COG0605" FT /EC_number="1.15.1.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N956" FT /db_xref="HSSP:1AP6" FT /db_xref="InterPro:IPR019833" FT /db_xref="UniProtKB/TrEMBL:Q6N956" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27134.1" FT /translation="MTFTLPELPYAYDALQPYMSKETLEYHHDKHHQAYVTNGNNLLKG FT TEFEGKSLEEVVKGSFNKNAPLFNNAAQHFNHIHFWKWMKPNGGGSKLPGALEKKINED FT LGGFEKFKTDFAAAGAGQFGSGWAWLSVKNGKLEISKTPNGENPLVHGATPILGVDVWE FT HSYYIDYRNRRPDYLKAFVDSLINWEYVEELYSKA" FT terminator 144609..144639 FT /note="TransTerm prediction, 98+%" FT CDS 144660..145109 FT /codon_start=1 FT /transl_table=11 FT /gene="crcB" FT /locus_tag="RPA1694" FT /product="Camphor resistance CrcB protein" FT /function="InterPro IPR003691 COGs COG0239" FT /db_xref="GOA:P61394" FT /db_xref="InterPro:IPR003691" FT /db_xref="UniProtKB/Swiss-Prot:P61394" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27135.1" FT /translation="MRLAVAPVLLQERRRSDVRRWSNCRMAYLLVFVGGGLGAMFRHFI FT NTLSGRLLGTAFPYHTFFINVTGSIVMGLIAGYLAFKGGSSQHFRLFLMTGILGGYTTF FT SAFSLDAALLYERGAVGLAVVYVLGSVVLAIAGLFGGMALIRAMT" FT misc_feature order(144720..144782,144825..144893,144930..144998, FT 145026..145094) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(145172..146032) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1695" FT /product="CUPIN domain:transcriptional regulator, AraC FT family" FT /function="InterPro IPR000005:IPR007113 COGs COG2207" FT /db_xref="GOA:Q6N955" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q6N955" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27136.1" FT /translation="MTVATRRKDTAELRAYHRQEGPVAAANCAGHLQTIARPVAAMTAT FT YPNESTSTRHLHRRDQFILQITGVTAMMTERGHFVVPPGHGLWIPAGVVHQSRAWGEVE FT AQTIYVTPNRERKASDTCRLIRASSLVEALMDEAVRIPEIYDQNGRDGTLIEFLLTEIA FT RMPEVTLHVQVPPDPRLGEICKAVLVDPSSNLTLDHWADKCGLSRRTLTRLFRRETGQS FT FSGWRQRVRLLEALARLGAGETVTGVALDVGYDSPSAFAAMFKRELGAAPRHYLRWTDQ FT EVALR" FT CDS 146452..147087 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1696" FT /product="conserved hypothetical protein" FT /function="COGs COG3576" FT /db_xref="GOA:Q6N954" FT /db_xref="InterPro:IPR011576" FT /db_xref="UniProtKB/TrEMBL:Q6N954" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27137.1" FT /translation="MDSQGAGGKPSIKSQDDLRAHFGQLSPLAEKKVLNHLDKFCRDFI FT ALSPFLVLATNDGNGHADASPRGDAPGFVAVLDDKTLLIPDRRGNNRVDTFGNIIDSPG FT IGLIFLVPGINETLRVNGRAEISQDAELLTPLAVQNVVPIIGLKIHVEETYFHCGKALM FT RSKLWNPASQVERNSFPTLGRIIAEQTAAIEVADAEKAMEEAYRTRLY" FT CDS complement(147290..147832) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1697" FT /product="Competence-damaged protein" FT /function="InterPro IPR003396 COGs COG1546" FT /db_xref="InterPro:IPR008136" FT /db_xref="UniProtKB/TrEMBL:Q6N953" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27138.1" FT /translation="MCRFVPPKATQAAQRRSVMRELLPVAEKVALRLIAQKQTIAVAES FT SAGGLIASALLAVPGASAYFVGSAVVYTREARRVLMDIPDPDMKGLRSSSEPYAELLAK FT QIRSRLGADWALSETGAAGPSGNRYGDAAGHTCIAVAGPRQAVMTLETESADRVENMHV FT FAATALTFLLRMMTPIG" FT misc_feature complement(147617..147682) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(147896..148639) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1698" FT /product="DUF81" FT /function="InterPro IPR002781 COGs COG0730" FT /db_xref="GOA:Q6N952" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:Q6N952" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27139.1" FT /translation="MELTPLIILIAGALCGGFVSGLSGFGLALVSLGFWLYVFPPTVAV FT PLVLLCSMASQASTMRMVWQHIDFKLVTPFLIGGLAGVIPGSVLVAYADPWGFKLFVGL FT FLLIFPPALYFTPPMALTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWDKHQ FT RRGVFQAFNSTVLIAALALQTAHGLVTRDVLYAAVLALPAILLGAWLGARNYHALSDRS FT FRNVVLALLFLSGLTLVWSSFAGLR" FT misc_feature complement(order(147908..147964,148004..148060, FT 148073..148138,148178..148243,148274..148339, FT 148361..148426,148472..148537,148559..148624)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(148553..148639) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.968) with cleavage site probability FT 0.409 atresidue 29" FT CDS 148785..150572 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1699" FT /product="putative acyl-CoA dehydrogenase" FT /function="InterPro IPR006089:IPR006090:IPR006091 COGs FT COG1960" FT /EC_number="1.3.99.3" FT /db_xref="GOA:Q6N951" FT /db_xref="InterPro:IPR006091" FT /db_xref="UniProtKB/TrEMBL:Q6N951" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27140.1" FT /translation="MLAGNKRDAVLAAKPGNAANLIAPDTTGLNFYRADPSLADLLRIH FT LPNALVDHIEPHLDRLGALAGGRLDECARLADRHTPILHQRDRFGRDAQYVEYHPAYRE FT LEAAAFGTFGIHALSHRKGIMGWPDVYPVTAKHAFTLLFNETEFGMGCPINVTDGCAKL FT LSKFGDEALKAKYLDGLTQTDMSKLTQGGQFMTEKEGGSDVGTLTSVAVPDGDHFRLYG FT EKWFCSNADAKVVMLLARPEGAGPGTRGVGLFLMPRFLDDGMPNHYRIVRLKDKLGTRS FT MASGEIKLEGAIAYAVGKLDRGFVQMAEMVNSSRLSNGVKSTALMRRAWHDAITVANNR FT VVFGSRIVDLPLARRQLMKILVPTEQGMSISFLTADALDRAEGGSQDAAALLRILTPTL FT KFRATRDARKVCGDALEMRGGIGYVEEFATARLLRDAHLGSIWEGTGNIVAIDALKRAI FT GRHGAESALGADLHARLDDAARVPQTWRDRLRGLIDRSISFGRDVARNSENEADARRAT FT SALYHVASAVALAWEGAKIEALRGDARRVLLSRLVVEHRLYQPDPFAHQDGKLELAIAD FT CLLGERNAGMDEIAPLLTA" FT CDS complement(150707..152209) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1700" FT /product="putative amidase" FT /function="InterPro IPR000120:IPR001687 COGs COG0154" FT /EC_number="3.5.1.4" FT /db_xref="GOA:Q6N950" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q6N950" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27141.1" FT /translation="MPASNSESAILPASPWSFATVTDLSAALKAKQVSAVELTQDAIGR FT IERHDDKVNAVCVRDFDRALQSARAADLALSRGGREPLLGIPMTVKESFNVAGLPTTWG FT FVEQKNFVAAADALAVERVKAAGGVILGKTNVPVALGDWQSYNEIYGTTGNPYDLGRTP FT GGSSGGSSAALAAGFGALSLGSDIGGSLRVPAHYCGVYAHKPTFGLCPARGHTPPPFPP FT LPSNRDLSVIGPMARSAADLALLLDVIAGTDPIFDGIAYQLDLPAARHTALKDFRVLLL FT DTHPLLPTGAAVHSALQTLADGLTKAGASVTRSSPLLPDLAETSRVYMRMLLSFLAAGF FT PPDLYAGAQAMAAGLSATDDSLAAERLRGIVLSHRDWVAADSRRTGLRAQWRELFKSFD FT AVICPVMPTPAYPHDHHEPQEERRILIDGKPHPYVDQLVWPGIATLPGLPSTALPIAMS FT DDGLPIGVQIVGPWLEDRTPLKLAELIEREFGGFKPPKTLVD" FT CDS complement(152591..153361) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1701" FT /product="conserved hypothetical protein" FT /function="InterPro IPR000694" FT /db_xref="UniProtKB/TrEMBL:Q6N949" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27142.1" FT /translation="MLVGAVLLLAEVHPFAEVPEQRIEVEVVTADEAPPPVPEKEPESK FT PVEQPTPNFEVSQTPTEQPKPQQQQPTPATKPQPAETKPPAPAPQPPQQSAQAPTPPPP FT PQPAPPQPAPPATAAPYPPAIPQEPDITVKYSVALGLPAEGGFDAPAETVANISADAVA FT ALRKRLKACASLPAGLSPSDNVKIVIRVGLTPDGRLAQEPFLIEASASAKGPALMKGAI FT SALEACQPYTMLPADKYREWRILDIGFTPQDFRS" FT CDS complement(153556..155112) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1702" FT /product="putative acyl-CoA ligase" FT /function="InterPro IPR000873 COGs COG0318" FT /EC_number="6.2.1.-" FT /db_xref="GOA:Q6N948" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q6N948" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27143.1" FT /translation="MTHPSIHAKSNPDKVAYRMASTGQALTYRQLDERSNQGAHLFRSL FT GLKAGDHIALLMENRLAFMEICWAAQRAGLYYTAISRYLTKDEIGYIVQDCGAKVVITS FT AQGSETMKSLLSDGPGAPLYYMVDPPTAGFRSWEQETAAQPTTPIADEVAGYDMLYSSG FT TTGRPKGIKREFEGNAIDVPSPFLRLLCEKMCGMNAESIYLSPAPLYHAAPLRFNMMAT FT TLGGTSIIMEHFDAEQFLALVEKYKVTQSQLVPTMFVRMLKLPDEVRSRYDVSTLKGAI FT HAAAPCPVDVKAKMIEWWGPILIEYYAGSEGNGVTVSTSQQWLAHRGTVGKAVVGTIKI FT LDDEGEEQPVGEIGTVYFADAPSFSYHNDPDKTKKAYNEKGWSTLGDVGYLDDEGFLYL FT TDRKSYMIISGGVNIYPQETEDVLLTHPDVADVAVFGVPNPEMGEEVKAVVQLRDGAAP FT SSERAAELIAFCRERLSPIKCPRSVDFEAELPRTPTGKLVKRHLKDRYWPSQQKAAAAT FT A" FT CDS complement(155391..156566) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1703" FT /product="putative acetyl-CoA acyltransferase" FT /function="InterPro IPR002155 COGs COG0183" FT /EC_number="2.3.1.16" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N947" FT /db_xref="HSSP:1AFW" FT /db_xref="InterPro:IPR016038" FT /db_xref="UniProtKB/TrEMBL:Q6N947" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27144.1" FT /translation="MAEAYIVAAARTAGGRKGGRLAGWHPVDLAASVINALVDRSGAAP FT DQIEDVIMGCVGQGGEQAVNVGRNAVLASKLPESVPGTSVDRQCGSSQQALHFAAQAVM FT AGTMDIVIAAGVESMTRVPMGSPSILAAKAGLGNYKSPKMEERYPNIQFSQFVGAEMVA FT NKYNLSKDELDEFAFNSHQRAIAATQGGKFKDEIIPLEITRADGSTDIHHIDEGIRFDA FT TLDGIKGVKLINENGGKLTAATASQICDGASGVVVVNEKGLKQLGVQPLARVHHMTMRG FT GDPVIMLEAPLPATEYALKKAGMKIDDIDLFEVNEAFASIPAAWLKATGADPARLNVNG FT GAIALGHPLGGSGTKLMTTLIHALKQQNKRYGLQTMCEGGGMANVTIVERL" FT CDS 156668..157375 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1704" FT /product="probable transcriptional regulator, TetR family" FT /function="InterPro IPR001647 COGs COG1309" FT /db_xref="GOA:Q6N946" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q6N946" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27145.1" FT /translation="MSNDAVSPTAMAAHLNHSAATKVPAAKNSTAEKLLVAAGELMIER FT NSVEISLADIAQKSGVNAALVKYHFGNKDGLLLALLERDASNEMTHLDFLLTQPLSPTT FT KMKLHIAGIIKAYHQFPYLNRLIHYLLHGSNREAADEVTKFFVGPLLDFHRRLLAEGVA FT TGDFREVDPVLFYTTLIGACDHLFFGRQTMMRAAGVGPVTEEVCRAYVVHIEKIVLGGL FT LTNRTRQPSATGS" FT CDS 157514..158590 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1705" FT /product="possible 3-hydroxyacyl-CoA dehydrogenase type II" FT /function="InterPro IPR001092:IPR002198:IPR002347 COGs FT COG1028" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N945" FT /db_xref="HSSP:1BDB" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N945" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27146.1" FT /translation="MELQAPPGHCSYLYKKKTPGNAQAICRNASSTKRHPRRDLEPDRW FT RPKPRPFAGHNDRGNAQGAVEGPDQQRNNHAGRIGPTALKRRRAVSSETKLQESAQGKG FT YPMQLKDVSVLITGGGSGLGAATARAMAAKGAKVAVLDMNKDNAEKVAAEIGGVACVGD FT VSQEAPVKEAIAKAEAAHGIVRVLVNCAGIGGAVKTVSKNGAYPLDHFSRIINVNLIGS FT FNCIRLVAERMQSAPTIGEERGVCINTASVAAFDGQIGQAAYSASKGGIVGMTLPVARD FT LASMNIRVMTIAPGLFLTPLLMGLSEDARKSLGSQVPHPARLGDPSEYASLAVQIVENP FT MLNGETIRLDGAIRMAPR" FT CDS 158814..159620 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1706" FT /product="putative enoyl-CoA hydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.17" FT /db_xref="GOA:Q6N944" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6N944" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27147.1" FT /translation="MTEALLVDHRDGVDWVTLNRPDSLNALDPSLIDALNEYFGRLQRD FT RTTRVVVLKGAGANFCAGLDLKHAMARRAGENATPGVTESLDSQRRIADIVMLMRRCPQ FT PIIALIRGAAAGGGFALALASDVRIAGRSARMNCAFIKLGLGGCDIGTSYFLPRLVGVS FT VASELILTGRFIGAERALMTGLVSELVEDDQLEAAAQPFVDAMMAASPVGLRLSKECLN FT MAVDAGSIEQVIAMEDRNQVLCSRSEDFKEGVAAFLEKRKPVYGNR" FT CDS 159671..161545 FT /codon_start=1 FT /transl_table=11 FT /gene="fcs1" FT /locus_tag="RPA1707" FT /product="putative feruloyl-CoA synthetase" FT /function="InterPro IPR000873 COGs COG0318" FT /EC_number="6.2.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N943" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q6N943" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27148.1" FT /translation="MTASAAAVLTKPPFRKVNWLPREIDVDRREGGVIVMKSRFPLMDH FT DPNLPMALAKWAKQRPDHIWLAQRKGPDRQWHKVSYAEAKRIVDGLTQALLDLKLPEGR FT PLTVLSGNSIEHALIMMAAMQARIPTAPVSPAYSLMSHDHLKLKYLFDLVKPAAVMVQE FT GAPFTKALHALDLKDVQVIHVANPADGTASIAFDDMVATPVTDQVAQSIAQITPDTVAK FT FLFTSGSTGMPKAVINTQRMMCANAAMMMQVRPRDPNGPPPVQLDWMPWNHTMGGNAAF FT NPLLIEGGTLYIDDGRPVPGQIEETLRNLREISPTYYANVPAGYAALASAMEKDDALCR FT SFFKDMQLMAYGGARLPDDLYERMQALAVRATGHRLVFYTGWGSTETSPTSTGTYWDTE FT RVGLIGLPFPGVELKMLPVGDKYELRLRGVNVMPGYHGQPDLTEKAFDEEGFYKIGDAG FT VFVDPNDPVKGIIFAGRVAEDFKLMTGTFVHVSTVRTDSIAAATPVIQDALVAGQDRAY FT IGLLAWPNLNACRVMIGDPNASFEDVVKHPDVIAALRAGLQKHNREVEGASSMRIARAM FT LMVEPPSIDGNELTDKGYINQRAGLERRAALVERLYAEHPDSDVMVLQ" FT CDS 161712..162839 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1708" FT /product="putative acyl-CoA dehydrogenase" FT /function="InterPro IPR006090:IPR006092 COGs COG1960" FT /EC_number="1.3.99.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N942" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:Q6N942" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27149.1" FT /translation="MNFDFSDDQKQLRDQARRFLAEKCPPKAVRAVLEGKADYDRDLWK FT GLAEMGFLGVAIPEEYGGTGAGHLELCVIAEELGRVLAPVPFSSTVYLAAEALLLAGSE FT EQKQKWLPKISSGEAIGTLALFEGTGNPSSAAVKLAVSNGTLTGTKKPVADGAIADFAI FT VAARTGNSGRETDVSLFLVDLKAGGVTAKPLHNVDPSRQQAELTFAGAKAEPLGAANEG FT WSILSRVMDRAAVLIAFEQVGGADRALEMGRDYALDRIAFGRQIGSFQAIKHILADMYV FT SATLARSNSYYGAWALSTDAAELPEAAAAARISATQAFQHCAKQNIQVHGGMGFTWEFD FT CHLYYRRSNALALSLGSQSYWEDQLIDRMRQKNAA" FT CDS 162976..164223 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1709" FT /product="putative acyl-CoA dehydrogenase" FT /function="InterPro IPR006090:IPR006091 COGs COG1960" FT /EC_number="1.3.99.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N941" FT /db_xref="InterPro:IPR006092" FT /db_xref="UniProtKB/TrEMBL:Q6N941" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27150.1" FT /translation="MNFDDTPQEAEFRAKARAWIDANAPKQYEEELRKASLGRVVLKGA FT NILEVAKAWQKKKADAGWAVPHWPKEYGGRGASPIERVIWQQEEGVFGKLTAMFIIGQG FT MCGPTMMAYASEEQKRHYLPPLGSGEKIWCQLFSEPAGGSDVAGLRTRAEKDGDDWIIN FT GQKIWTSGAHYSDYGILITRTDPTVPKHKGLTMFFLDMKSEGVEVRPIKQANGNSDFNE FT VYFTNVRIPDSQRLGAVGDGWNVSLTTLMNERMSIGANVATGFPELFDYCSSLTLDGAP FT ALDDRAVRSKLANWAVKASGLRYTSFRSISALSKGQRPGPENSIGKLVAGSMIQEVAMY FT ALDLQGAAGVLSGPEDAEVAGRFQAMLLRSPATRVEGGTDEILRNIIAERVLGLPGDIR FT VDKDVPFNQIPTKGRA" FT CDS 164374..165618 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1710" FT /product="putative acyl-CoA dehydrogenase" FT /function="InterPro IPR006090:IPR006091 COGs COG1960" FT /EC_number="1.3.99.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N940" FT /db_xref="InterPro:IPR006092" FT /db_xref="UniProtKB/TrEMBL:Q6N940" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27151.1" FT /translation="MNFDDTPQEAEFRAKARAWIDANAPKQYEEELTKSGLGRISLKNA FT DIVEVGKAWQKKKAEGGWACLTWPSEYGGRGATPIEKVIWQQEEGVYGKLTQPFQIGEG FT MCGPTVMAYGAEEHKRRYLPKLASGEEIWCQLFSEPAGGSDVAGLRTRAEKDGDDWIIN FT GQKIWTSGAHYSDYGLLITRTDPNVPKHKGLTMFFLDMKSPGVEVKPIKQANGMQEFNE FT VFFTNVRIPDSQRLGAVGDGWNVSLTTLMNERMSIGARLATGFPEIFAFCNDLVTENGP FT AIDDPAVRSKLANWAVKASGLKYTSYRSISALSKGQRPGPENSIGKLVAGPMLQDIAAF FT AMDLEGAAGVFTDPAEAEAGGSFQAMLLGSPSMRIAGGTDEILRNIIAERVLGLPGDIR FT VDKDVPFNKIPTKGR" FT CDS 165781..166479 FT /codon_start=1 FT /transl_table=11 FT /gene="pnbA" FT /locus_tag="RPA1711" FT /product="putative nitroreductase" FT /function="InterPro IPR000415 COGs COG0778" FT /db_xref="GOA:Q6N939" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:Q6N939" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27152.1" FT /translation="MMTDAPATTAPIDVLEDLMAARYSCRGFRPDPVPRATIERILGAA FT QKTASWCNSQPWQVVITSGEATAKFRDVIYPAAASGAPMSGDFEFPREYRGVYLDRRRE FT SGFQLYNAVGIARGDKAAAAQQALQNFSFFGAPHVAIITTDEALGVYGAVDCGGYVTSF FT MLAAQALGVATVPQAALAFHAGVVRKHFGLSDDRRVVCGISFGYADPDHKANSYRTNRA FT ALGEVATFVE" FT CDS complement(166881..167663) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1712" FT /product="putative enoyl-CoA hydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.17" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N938" FT /db_xref="InterPro:IPR001753" FT /db_xref="UniProtKB/TrEMBL:Q6N938" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27153.1" FT /translation="MSDSDTASAPVLTIDGPRATIRLNRPKHLNRLQPDDLATLLDQFA FT RLDADPAVRVLVLTGTGRAFSAGFDLGEVAERATAEVEAESPGSAFEVVVNRLEDLRVP FT TICRLNGGVYGGSTDLALACDFRIGVDTAEMFMPAARLGLHYYPGGIKRYVSRLGIDNA FT KRLFLTAQRIEAAEMLRIGYLTAMVPMDRLDREVDALATTLAGNAPNAVAGMKRAINEF FT ARAAFDEQAADTRARASMRSDEIKEGIAAFTEKRAPRF" FT CDS 167966..168640 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1713" FT /product="possible cyclic nucleotide-binding domain" FT /function="InterPro IPR000595 COGs COG0664" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q6N937" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27154.1" FT /translation="MDMSLIAQNAGMASSVFATIFVLATATMRTMIPLRVFGILTNLLL FT IAVSIPTHNYPTLALHAVLLPLNAWRLHQMLQLVRDVRKSVNSDLSMDWLKPFMTERKC FT ATGEELFYKDERAEEMFYIVSGRFRLVESGIELPVGAIVGELGMLSPTHTRTQTLECVE FT AGTVLGVSYRQVEELYVQNPEFGFYFLRLASARLFENIESLQARLAAVAPPPRTDAVGR FT TA" FT misc_feature order(167975..168043,168062..168130) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 168694..169536 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1714" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N936" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27155.1" FT /translation="MLGENDRVVVLNAPATASPPIAQALEDAAARLVNYQGRRYARLYL FT DRISRFVGRREVDDAMLLRIAELLAMRMAYEDPIRIAQLTLQEAASAPSGRAMPRIDRR FT CRFRIDEVVAALPVVVADPTLKVLDYLGWLHMPVKMRFNGSGWLGIRKLRIISWLRRWR FT LLSIRYANERKWVERWLHMIDRSLAVRPDAVTAVVESATMVRGYGDGYRYGMANWTLII FT DALVKPAVNGTLPLPDLAQAIGEARAAALPDRKQTSLKRAIEAIRARCGAMPIQAAAS" FT CDS 169691..170191 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1715" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N935" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27156.1" FT /translation="MRSLCAGGRAIGLSGPDSRRHHRPQGPSEGASLILPDLSSSIAVG FT ALIYWMLLLTIKHVFADFIFQNKWMAMGKDAKTGWALPLLAHCSVHLVMTTLLMLILAP FT RYWYIGVIDFLIHLAIDRLKGFLVATYDVTNQDRWFWWLIGTDQALHHLTGFGLAIVLA FT ANP" FT misc_feature order(169817..169885,169928..169996) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 170465..172675 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1716" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160 COGs COG2199" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N934" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27157.1" FT /translation="MARHLESQLDFIFFFYGLSFILLGALCLVLARGQDDDRGATIRWI FT GLFGCVHGANEWLDMLALIAGDGTEFMVVRTVVLIVSFMLLAEAGRKGGETHGLPMPGP FT WIYIPIFIGLGAIGFVDGLASAKAAARYLLAAPGAVLVAFTAFTGRNDDIRINRPLMVG FT VTIAFAGYAVAAGMIVEFAPFWPANSFNQETFLRVTGVPIQLVRGLIAVALAALVWAAW FT GRRVMEKLDYPGYSLHLKRQFIDVLTTLLLVLALGWALTNYLGEIYREGVESEATGDVT FT LLVSGLERETAIADAMVKALAASPSVQPMLAGREGNRVAELSLLELDAGVIQATRGLIV FT NRAGDIVGSSDSSDQSWLGMPNLRSVDWFEQSIAGRAVHQIRVDPPQRLRTYLTASPIR FT DADGEIQGVAMLETSLETLAELMTRFDQAFFVVDARGLVVITNRRDELFRTLWPRPDLP FT RLQIAEQFGASGRPMLAREIFGGDWVEFGGRRSYVLRQPIDGTQMSLILAIPVKGIFAS FT RLLGIIITLQVAIAALFYFFGMDRGVRDRFERQLREELLIQTEDLARQAATDSLTGLAN FT RMKFDARLNEELSRSLRNARPFSLIIFDIDHFKEVNDIYGHPVGDQVLVRLSRTVDASI FT RQADLLARWGGEEFAILLPDTDAAAAYETAKKLRLLVAHTIFEHVGTITASFGVAQVLP FT GDHADTLVARADNALYRAKLNGRNRVELSLPVIEVVELSPTA" FT misc_feature order(170492..170560,170594..170662,170675..170734, FT 170768..170836,170846..170914,170951..171019, FT 171062..171130,171191..171259,172007..172075) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(172882..173268) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1717" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N933" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27158.1" FT /translation="MADPVSLFPNLLQPAAKTYAPMGIKFWEGEATVLDSMKEFADGWF FT ERRRIGTRAALEAARRIGEATTPLDAFREYQDWLGGATARVLEDGMAWQQQFMKANAKL FT APHLQKQEPPNESSAPTPEDRLSA" FT CDS 173515..173922 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1718" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N932" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27159.1" FT /translation="MWSSREAFENDACPVREELLGQMYRANENGLSQLVDSVSGDVRAM FT LALFCYRRAHLQPLALAVAATCDERDLIQAGGRAGSVLYALAHEKRSPRVSGYTQRKSI FT TLSTAPLASFAPLDQETDVELDDQPAPDTTN" FT CDS complement(173929..174261) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1719" FT /product="Protein of unknown function UPF0153" FT /function="InterPro IPR005358 COGs COG0727" FT /db_xref="InterPro:IPR005358" FT /db_xref="UniProtKB/TrEMBL:Q6N931" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27160.1" FT /translation="MNALPPIEAENPCQSCGACCGYSENWPRFTIEDDAALDAIPAALV FT NQRLSGMRCEANRCAALSGTIGQATACTIYALRPEVCRDCQPGDPECLMARRKFRLPPL FT PAAITD" FT CDS complement(174325..174945) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1720" FT /product="conserved hypothetical protein" FT /function="COGs COG3576" FT /db_xref="GOA:Q6N930" FT /db_xref="InterPro:IPR011576" FT /db_xref="UniProtKB/TrEMBL:Q6N930" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27161.1" FT /translation="MTEALHVSSDIAFTPTVKAIQARKGSRDAYARVERNGGWSTTIDD FT NLATFLRAQTSVLLATASADGQPYIQHRGGPAGFLHILDEHTIGFADFKGNQQFITQGN FT LAENPKSYLFVIDYAHRRRIKIWGHAKVIEDDPELVARLMPKGYKARPEQAILFEVEAW FT DSNCPQHIPQKFDAADVAAAITTRDIRIAELEALLAAATQPRE" FT CDS 175047..175964 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1721" FT /product="transcriptional regulator, LysR family" FT /function="InterPro IPR000847:IPR005119 COGs COG0583" FT /db_xref="GOA:Q6N929" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6N929" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27162.1" FT /translation="MDRLDTMTAFVAVADLQGFAPAARKLGLSPSAVTRMVAALEERLG FT TRLLQRTTRSVALTDTGARYLERMRRILADIEEADTSAAAERVTPSGRLVVSAPVGFGR FT RHVAPLLSDYLRRYPEVTGELRLSDLMINLVEDGVDCAVRIGHLSDSSLVARQLGAMRR FT IVVASPAYLAARGVPAMPAEIATHDVIHFGQTGAPVGWHFVVDGRDVRIACTPRLVSNV FT ADVAILDAERGGGLTRVLAYQAADAIAAGRLQIVLANYEVPPLPIAIVYPTSRLLSAKV FT RAFIDLAAETSDWRFGGDGKRSGA" FT CDS 175961..176611 FT /codon_start=1 FT /transl_table=11 FT /gene="alkB" FT /locus_tag="RPA1722" FT /product="alkylated DNA repair protein" FT /function="InterPro IPR005123 COGs COG3145" FT /db_xref="GOA:Q6N928" FT /db_xref="InterPro:IPR005123" FT /db_xref="UniProtKB/TrEMBL:Q6N928" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27163.1" FT /translation="MTADLFDGLDDAPRRQDIAPGAALLSGFARANERELLAAIDAVVA FT RAPFRHMMTPGGHTMSVAMTSCGSVGWVTDRRGYRYSPNDPDSATPWPKMPAVLRDLAQ FT RAAADVGFAGFDPDACLINRYVPGAKMALHQDKDEADFSAPIVSVSLGLPAIFQFGGMA FT RSDKPRRYELRHGDVLVWGGPSRLVYHGVLTLKDGEHPLLGRQRINLTFRKAL" FT CDS complement(176618..177949) FT /codon_start=1 FT /transl_table=11 FT /gene="paaK" FT /locus_tag="RPA1723" FT /product="phenylacetyl-CoA ligase" FT /function="COGs COG1541" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N927" FT /db_xref="InterPro:IPR011880" FT /db_xref="UniProtKB/TrEMBL:Q6N927" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27164.1" FT /translation="MAATVHQIKPGTYNPELDDAERASRDEIVALQTKRLAWSLKHAYD FT NVAHYKAAFDRKGVHPSDFRQLSDLSKFPFTVKTDLRDNYPFAMFAVPRESLVRVHASS FT GTTGKPIVVGYTPKDIDTWATVMARSLRAAGARRGMIIHNSYGYGLFTGGLGAHYGGEK FT LGCTVVPVSGGMTERQVQLINDFRPDIITVTPSYMLAILDEFKRQGLDPRQSSLKYGVF FT GAEPWTNAMRAEIEQAFDMDATDIYGLSEVIGPGVAQECVETKDGLHIWEDHFYPEVID FT PDTGDVLPDGEKGELVFTSLTKEAFPVIRYRTRDLTRLLPGTARPGMRRMEKITGRSDD FT MIILRGVNVFPTQIEEVLLGTDWCGGHFIIELTREGRMDEMTVLAEARPESWDGAGLVP FT HAERAAAYIKNTIGISTTIKVVPPDTLERSLGKARRVFDKRPKG" FT CDS complement(177964..178437) FT /codon_start=1 FT /transl_table=11 FT /gene="paaI" FT /locus_tag="RPA1724" FT /product="putative phenylacetic acid degredation protein" FT /function="InterPro IPR003736:IPR006683 COGs COG2050" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q6N926" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27165.1" FT /translation="MTAAAPQTQAEPSPDQLARACADAMWANDHASKALGMEIVEIGAG FT SATLAMTVTTDMVNGHGIAHGGFIFTLADSAFAYACNSYNDSTVAAQGAITFIRPGKLG FT ARLVAAAREVSRSGRSGIYDVRVTSGSTVIAEFRGHSRSIGGTLVPPQQPDPR" FT CDS 178662..180701 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1725" FT /product="putative aldehyde dehydrogenase" FT /function="InterPro IPR002086:IPR002539 COGs COG1012" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N925" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q6N925" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27166.1" FT /translation="MTAILQSLACDRWETPATGLVDIPSAIDGRVVARASSAGLDFAAI FT ARHARQVGGPKLRAMTFHQRADMLKALGAYLGERKEQLYALAADTGANRRDNAIDIDGS FT LVTLAAFASRGRRELPDAGFITEGEVEALSKRGSFVGQHILTPLHGVAVHINAFNFPCW FT GLLEKLAPALLAGVPVIAKPATATAYVAEALVKMIDESKLLPQGALQLVCGGLGDLLDH FT LNGQDVIAFTGSLETSEKLRAHPNVARHSIRFIAERDSLNAAVLGPDIKPADPEFDLFA FT HEIVREMTAKAGQKCTAIRRVLVPRAQEAAVIEALKARLADVKLGDPRRDDKAMGPLVS FT RGQREAVRAAIATLQSEAEIVFGDPNVCEAEGIDTQAGAYMSPVLLRAREPMQASHVHA FT TEAFGPVATVLAYDDVAQAVELVRRGEGSLVASLFTYDDVVAEQMILGLAPFHGRLLIV FT DRDDAAESTGHGTPLPALLHGGPGRAGGGEELGGLRSVYHYMQRTAIQCSPRRLARLTG FT TWTRGAPAPAAEVHPFKLNYNQLEIGQSIETASRPITLDDIEHFAHFTGDTFYAHMDEA FT AAKANPFFPGRVAHGYLILAFAAGLFVDPAPGPLLANYGLDNLRFLKPVSPDDSIKVKL FT TVKQKSPARRPEYGEVRWDVEVVNQNGEPVARYDLLTMSARPAA" FT CDS 180758..181774 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1726" FT /product="putative oxidoreductase" FT /function="InterPro IPR002085 COGs COG0604" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N924" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N924" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27167.1" FT /translation="MSDSSVAAAMSIEARCVRLQDKAADVAAITPVLERLPLSRRGPSE FT VLIEVKAAAVNPSDVKAATGLMPYAVFPRTPGRDFAGRVIDGPAEWLGRDVFGSSGDLG FT IRRDGTHATHLVVEADALVEKPGSVSWEEAAGIGVPFVTATEGLRRAALAAGETLVIMG FT INGKVGQAAAQIASWRGARVIGVVRKAEPYAGHATAPVEIIDSSSTDVAAKVRELTGGK FT GADVVFNTVGDPYFKAANQCLALRGRQILIAAVHRIVEFDILAFYRGQHTYVGIDTLAF FT SSIATGEVLRSLGDGFAGGHLKPFPIVDGAIYPLGQAQAAYRAVAGSSRDRVIIKPD" FT CDS 182016..182753 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1727" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N923" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27168.1" FT /translation="MLDKVSGADLAMLSTQALKTRLLQLVEGQDDKRLSEKLALLDGLL FT APYVDELTRRNPYPRAEDQVAAVIGVWTPVWSTIPFHHALPGRIPSQSYQIFRDRGFYA FT NVAHHAPGHQNALLHRLTPLGLACNLMLVQRFEVADGRWLIENIGIELARGRRDKGLSI FT DDAEAWFDAVLAQKLDRAEAPNATLGAPDFSGLDAASAKRLAKSFQAKPMMENIYLDDD FT LRLIRSQREATQRPSYTIGIRLR" FT CDS complement(183272..187531) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1728" FT /product="conserved unknown protein" FT /function="InterPro IPR001687 COGs COG0464" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N922" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27169.1" FT /translation="MPEAAVVAVLYGGSLGPQADIARSTRPNSMDRPYARNSPSKFGDE FT LPSNLHIVRFSLRKTSILDNCRGASTKLLFHSPYRADMPRIVRQINVVPSKAEDAKHRP FT FSDFAATPNLVLLGDPGSGKTHLFKEAATAEGARFLKARDFLNMPAHALAGQPLFIDGL FT DEQRSGRSDRGIVDALVSKLWDVKPAKIRISCRVADWLGESDIAALRPYFDQHGDAPVL FT QLDILSAAEQREVLAGQGVEEVVADAFLVEAEERGLGDFLENPQNLIMLWRAVQTGSWP FT ATRMQLFEMATGLMLQESNQEHARSGSGSLSVAELRPVAGAVCAVRLISDVDAVSLTDQ FT EGTADIPGYRSVSFFAPELVQAALGRRVFDASTEAETVDYAHRTTAEFLAAEFLAQRVR FT AGLPVGRVVALMGVDGHPAAELRGLHAWLAVHLPETADELIEADPYGVLTYGDAASLTT FT SSCACLVRALDRLSKENPWFRSGDWQSRSIGALARPDMVGEFRAILNNPASSFGIRSVV FT VDALMLGTPIPEMLPDLVAVLTRQVSPFAERAHALAALVRLGAAGKVALRVAFQTQLGA FT NTNDISLRVEIIMALYGHPFGPADVVSLIDDCLRIQDMASSGMLWTLADMLPEGDLPAI FT LDGITVPPESGRGFDRRVWEVGSFFARILVRAWRATGSLDPDRALEWLRKRAAFKGGTS FT ESRARGLREAMRDAPERTAAIARHFFRNVPIDEHRWLSYNRFREATLFEPDIDTLLDIA FT AEEMASNEAGERQVFLCEIAFALSYQAAHPHAAEVFEELWSRGVDNDALAKAVAKATST FT NLPHNYFMDRSSRDEVDAEESRERQRQDFDRDIEQIRSGAHMGWLNHLGMIYFALYADV FT DRAATPRERLAAWLGEERTDAALEALMASLSRDDLPSYADVMKLTAQHQHYDWWYALVA FT GLNECWAAGLDLSNLSDDFLQGMLAFDITNPVSRSQDGTEHWIVHPWRQALMERRPELV FT RDVYLAVVRLRLSRNEQFSDGLRELLAEAAFEPYRVDVVLGLLREFPNAIPFRLDELLA FT TAAKLPAGHKGFLELAGQILSGAVLVDQPQRDLWLATAYVLAPDSFEREVQQRAVVHPD FT FVFDLRDKGGFGDDRQSSQPLALPVAEFIARLAGSLFPDTPHPSDGWDGNTNAWDASDY FT VRSLINLISASPSEAATKALDRLNADPGLVSYRPHILHALANQRQRRRDAEYDRPSWSQ FT TVAALRNAAPATVADLYALLVVHLEDLGHSIARANTDIFKQFWNLDSYARTAGPRPEEA FT CRDNLVTLLRPSLLPLGITVEPEGHMIADKRADISVAMPSRKILCELKRDYHAEVWTAI FT EGQLERFYAHDPDAKGFGIYCVLWFGHKRPRGIPVHPKGMAAPQNPDEMEKMLSSLIPE FT SMRSRLAVIVIDVSGEI" FT CDS complement(188273..189235) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1729" FT /product="Fatty acid desaturase family" FT /function="InterPro IPR005804 COGs COG3239" FT /db_xref="GOA:Q6N921" FT /db_xref="InterPro:IPR005804" FT /db_xref="UniProtKB/TrEMBL:Q6N921" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27170.1" FT /translation="MPAVARIDPKTIFTPDEWARLTHRSSARGLWLVAHAWGCIALAVA FT LVTIWPNPLTWLIAVMIVGTRQLGLAILMHEAAHGGLHCNPKLNEWIGQWLCAVPVGAD FT LPAYRRYHLQHHKYTQQPEDPDLVLSAPFPISKDSFVRKAIRDLTGQTFVKQRLPALKA FT LFAPADSGAPKHDSFVASGKARTQRFLAANAVLLALFWLAGAGVWFVGVWLVAMATWLP FT LVTRVRNIAEHACTSTGADPFSQARTTLANPIERALIAPYWVNYHAEHHLFMYLPCYNL FT PEAHRLLRDKGLIDRVTVAPSYRDVLKLATTRPRAVAAE" FT misc_feature complement(order(188588..188653,189014..189070, FT 189083..189148)) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(189288..190511) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1730" FT /product="possible hydrolase" FT /function="InterPro IPR000379 COGs COG1765" FT /db_xref="GOA:Q6N920" FT /db_xref="InterPro:IPR003718" FT /db_xref="UniProtKB/TrEMBL:Q6N920" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27171.1" FT /translation="MPTERFQFAGSGGHQLAAALDLPDAQPLAYALFAHCFTCSKDNLA FT ARRISAAMAARGIAVLRFDFTGLGASEGEFENATFSSNVADLVLAADHLRATHRAPTLL FT IGHSLGGAAVLAAAAQIPEAKAIATIAAPSDPSHVTGLFADDIETIRTEGRVNVSLAGR FT PFTIKREFLDDIAEHNLMAEIGKLHKALLILHAPTDDTVGIDNATKIFLAAKHPKSFVS FT LDHADHLLSDRRDANYAAGVIAAWAQRYIDAEPPAPTAGAPEVPRLVTVQETGDGKFQQ FT QISVGPHRLVADEPASVGGRDSGPGPYDLLLSALGACTSMTMRLYAERKALPLDRVTVT FT LSHAKIHAEDCAECETKVGLLDRIERVIGIEGDLSAEQRAKLIEIADKCPVHRTLTSEV FT SIITRSTD" FT CDS complement(190690..191355) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1731" FT /product="similar to eukaryotic molybdopterin FT oxidoreductase" FT /function="InterPro IPR000572 COGs COG2041" FT /db_xref="GOA:Q6N919" FT /db_xref="InterPro:IPR000572" FT /db_xref="UniProtKB/TrEMBL:Q6N919" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27172.1" FT /translation="MSDDAELPPESKLTRSKQRWAAEGKFLTGRHVRPDEQRLPPGQHL FT VKDWPVLDLGLTPQIGHDRWRLDVYGAVAQPVFWDWAQFTAQPQADIVSDIHCVTTWSR FT YDNRWQGLATRTLLEACQPTDQARFVVLHSYDGYTTNLSIEDFAAPDALIAHSWSGAPL FT DQEHGGPVRLVVPHLYFWKSAKWLQAIEFREDDAPGYWEVRGYHNRGDPWAEQRYSSD" FT CDS complement(191378..192577) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1732" FT /product="possible cytochrome P450" FT /function="InterPro IPR001128:IPR002397 COGs COG2124" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N918" FT /db_xref="InterPro:IPR017973" FT /db_xref="UniProtKB/TrEMBL:Q6N918" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27173.1" FT /translation="MSERAPVTDWVNDFDHTDPRWTENPYPIWDELRSAGPLVHTDRFL FT GCYMPTTFAAVKEISYDTDHFSSRRVIVRNVRSESPPPAPPITSDPPEHKPAKRLLLPP FT FTPDAVAKLEPRVRAICNELIDAFIEDEGCDAATAYTKHIPVKTICHMLGIPEDDSDIF FT IRWIHEILELGINDDAILMKAVFEMSTYFQGHIAHRKQKPTDDLISTLMNARDDKGQPL FT SDAHVLGSLRLLLIAGIDTTWSAIGAALWHLATHPADRERLLAEPELMPTAIEEFLRAY FT SPVTMAREVMKETSIAGCPVKPGNMVLLSFPAANRDPSVFPEADRVMIDRKENPHVAFG FT LGIHRCVGSNLARMEMTVAIEEWLKRIASFRLDPSQKVRWSEGTVRGPRSLPLLFGKPS FT " FT CDS complement(192646..192873) FT /codon_start=1 FT /transl_table=11 FT /gene="fdxA" FT /locus_tag="RPA1733" FT /product="putative ferredoxin" FT /function="InterPro IPR001080 COGs COG1141" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N917" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27174.1" FT /translation="MSDHLNASETLKIHVDQDKCQGHARCKALAPELFELDDYGNAHET FT GDGTVPTALIDQAWLAKSNCPENAIVIDEA" FT CDS complement(192973..194406) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1734" FT /product="putative amidotransferase, subunit A" FT /function="InterPro IPR000120 COGs COG0154" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N916" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q6N916" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27175.1" FT /translation="MAADQALVKETACAVVDKLKSGEVTPIEVLDVLEERIAEVDGAIN FT ALPTLCFDRARGHAAELMKKPPAERGLLAGLPVPIKDLTAVAGVLTTQGSPIYKDNVPA FT RSDLMVEHLEGNGGVVYAKSNTPEFGAGANTFNEVFGATRNPWDLSRSAAGSSGGAAAA FT LASGTAWLAHGSDMGGSLRNPASFCGIVGLRPSFGRVAHTPAAKIDRNLGVQGPMARNV FT EDVALLLDAMSGEYAADPLSIPSPATSFLAAARSRQKPLRVAYSPDLGITPVDPEVAAV FT TRKAAERFAEAGVIVEQAQPDLSEAHECFQALRAFDFAISKADLLRTKRDLLKPEVIWN FT IEQGLKLSVDDLAKAEAQRVAMTARTIEFFKTYDLLLCPATITAPFPVEQRYLAECNGH FT TFGNYVEWLGIVYAITLVCCPALSLPCGFTATGLPIGLQMVARPRNEAGLLAGAALLED FT ILGLKSTTPIDPRPAPASL" FT CDS 194545..195657 FT /pseudo FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1735" FT /product="pseudogene of fused ABC transporter ATPase and FT permease domains" FT /function="InterPro IPR001140 COGs COG1133" FT /db_xref="PSEUDO:CAE27176.1" FT /inference="non-experimental evidence, no additional FT details recorded" FT misc_feature order(194635..194703,194761..194829,195001..195069, FT 195112..195180) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(195670..197046) FT /codon_start=1 FT /transl_table=11 FT /gene="bglA" FT /locus_tag="RPA1736" FT /product="putative beta-glucosidase" FT /function="InterPro IPR001360 COGs COG2723" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N915" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q6N915" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27177.1" FT /translation="MASSLTPPASEPVAGLPVLSHIRKDFIWGVSTASFQIEGAANEDG FT RGQSIWDVYCRSGYVANNDTGDVACDHYHRYQEDVALMKTLGIQAYRFSIAWPRIFPQG FT TGAINEPGLAFYDRLIDALEAAGIEPWICLYHWDLPQALEERGGWMNRDIVGWFADYAW FT VIGERYGKRVKRFATFNEPGIFSLFSRSFGARDRSADEKLHRWIHHVNLAHGAAVDVLR FT ETVADAKIGLVTNYQPVYPSSDKPEDVAEAKLISDYWNRAFADPQYRGEYPDLIRDAIK FT PYIQPGDMERIHRPLDWFGLNHYSPVYINSDPNAIVGLGWGPKPEGIPRSPIDWTIEPD FT AFRDTLIEISRRYGKPVYVTENGYGSNIEKPDANGEVVDPGRIGFLRDYITALDQAVAA FT GADVRGYMVWSLLDNFEWESGYSVRFGLIYIDYATLRRIPKASFKWFADVIRHARGTAA FT " FT CDS complement(197232..198011) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1737" FT /product="possible dehydrogenase" FT /function="InterPro IPR002198:IPR002347 COGs COG1028" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N914" FT /db_xref="HSSP:1BDB" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N914" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27178.1" FT /translation="MDLHLRGKRVLITGASKGIGAAAAEAFAEEGCHLRLAARNKDALE FT ALAARLRDHHGVGVAVHVADLRSKADLAQLAAQATDIDILINNAGDIPRGTIDAIDDAT FT WRHAWDLKVFGFIDLTRLVYAQMKARGGGVIINDIGAAGERLDAGYICGSAGNAALMAF FT TRALGSRSLADNIRVVGINPGPVGTDRYLGRMKGRAKAELGDESRYLELQKNLPLGRPA FT QPREIADLMAYLASDRSGYTTGAIFSVDGGLSAGWPA" FT CDS complement(198054..199538) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1738" FT /product="putative branched-chain amino acid transport FT system ATPase" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG0410" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N913" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N913" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27179.1" FT /translation="MDAVSSNFAPTLEVRGLTKRFGGLTAVKNLSFDLRAGEIFGLIGP FT NGSGKSTAMKSIMGIERPTAGEVVFQGENVAGLPAHKIARKGFGMVFQHSRPLNRQTVL FT ENIMVALLPDSLLALFHDRALVERAEAIAERVGLGAVMRRKPPTLPFADLRRLELAKAI FT ARDPKVVLVDEPFAGLTLAEVGTFSELIAGFRDEGRAVLLVDHNVKSVAALVDRVLAMY FT LGEEICTGAASEVMKNETVRRVYLGGAIETSARPETSFHDKVPLLQVENVNVFYGKAQA FT LENVSIHVHESEFVSVVGLNGAGKTTLFNTISGLLPYTGAIKRGGEALRGTSAAKIARD FT GIVQCPESRELFGEMTVRENLDLGGYHLADDVRDKQIEWLFDLFPILRERHGQLAQTLS FT GGEQQMLAIGRALMMQPKILILDEPTLGLAPVILEQLSKALEKLRQTSSITVLLGEQNV FT TFALPHADRVYVLEHARIVWEGDPARFAAEAGEGYL" FT CDS complement(199538..200461) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1739" FT /product="putative branched-chain amino acid transport FT system permease protein" FT /function="InterPro IPR001851 COGs COG0559" FT /db_xref="GOA:Q6N912" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q6N912" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27180.1" FT /translation="MGFFTSRLFWIALLVVAVAATLPLYVSGYILGLLTVAFYFGVFAM FT SWDLLFGFAGEVNFGPTFLIGTGAYTAGIVNNLYGVSPYFCIFIGAMAAVVAGFVLALP FT ALRVRGPYFGLTTLVAVLMLQNFIVVFADLTGGEIGLTIPDVITINAGANYWIALGFMT FT VSGAILYGLSQSPIGLVLQASGQDPVQAGALGFNIVKHKLFAFVVSAFFSGLSGALLVF FT YFGTASVGTVVDVAVGVNVIVAAVLGGRRTVIGAALGAVFLIVAGEFLRPTGELATFIV FT SAIALLVVLFFPGGFLGAAMSREART" FT misc_feature complement(order(199556..199621,199652..199702, FT 199718..199774,199787..199852,199955..200020, FT 200066..200131,200153..200218,200249..200314, FT 200336..200431)) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(200402..200461) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.997) with cleavage site probability FT 0.664 atresidue 20" FT CDS complement(200463..201338) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1740" FT /product="possible branched-chain amino acid transport FT system permease protein" FT /function="InterPro IPR001851 COGs COG0559" FT /db_xref="GOA:Q6N911" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q6N911" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27181.1" FT /translation="MLALQILIDGFAISALYALGATGFTLIFGVSGVLNLSHGAIMVAA FT AVAAWAASSTFGIGSYAGALIGIATALVIALLTYFAVVQPIQRSRRIANEEKEIFVLTG FT TLLWGIMIQEAIAYFFTNNAKTVLPIVTGVVEILGVRTPRNEIFTALVCCLVIALLWLL FT VNRTKIGKAVLAASMNPRGVTLLGLELTNIYVVVWIIYGVLAGIAGVLLGMFLGVSSYS FT VGPLTASAFSIVVLGGLGSVSGSLIAAFVVGYLETFTAYMISPAYRSIPALLLLVTVMY FT LRPQGLLGRR" FT misc_feature complement(order(200493..200558,200580..200645, FT 200691..200756,200847..200897,200976..201041, FT 201090..201155,201171..201236,201243..201308)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(201183..201338) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.969) with cleavage site probability FT 0.853 atresidue 52" FT CDS complement(201535..202785) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1741" FT /product="possible branched-chain amino acid transport FT system substrate-binding protein" FT /function="InterPro IPR001828 COGs COG0683" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q6N910" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27182.1" FT /translation="MSPAPSNVRSWSMRAVVAATAIGFGASSALAADPIKIGVIAEAQA FT IAGASIPQAAQLAAEEINAKGGIDGRKIEIVSYDNHSSSADSVRAFQRAVNEDKVNAVI FT ASYISEVVLALMPWASRLKTPFVTPGAASNEITKAINKDYEKNKYTFHGYLTSGELAQS FT VCDAAKDLLVDARQMKSAVIMSEDAAWTKPLDVGYQECLPKVGLKVLDHIRFSPDTTDF FT TPIFNKIEGSKPDVIITGISHVGVQPTVQWKNQQVPIPMFGIASQATNETFGKDTNNAS FT DGVLYQGVSGPGVAVTSKSVPFAENFKKKYGNYPSYAGYTAYDEVYYIAEAVKRAGSTD FT GEKLVEALEKTDYEGTIGRVQFYGKDEPFTHGLKYGKGLLTGLMLQWQDGKQVAVWPPE FT VAKAKIKFPAFIKAAAN" FT sig_peptide complement(202690..202785) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.995 atresidue 32" FT CDS 202954..204072 FT /codon_start=1 FT /transl_table=11 FT /gene="yeaU" FT /locus_tag="RPA1742" FT /product="putative tartrate dehydrogenase" FT /function="InterPro IPR001804 COGs COG0473" FT /EC_number="1.1.1.93" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N909" FT /db_xref="HSSP:1A05" FT /db_xref="InterPro:IPR019818" FT /db_xref="UniProtKB/TrEMBL:Q6N909" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27183.1" FT /translation="MKPRHARHKGGTELNQSKDQYRIAVIAGDGIGKEVMPEGLRVLEA FT AAKKHRVKLVFDHFDFASYDYYEKHGQMMPDDWKEKIGGHDAIFFGAVGWPAKIPDHIS FT LWGSLIKFRREFDQYVNLRPVRLMPGVPSPLAGRKPGDIDFWVVRENTEGEYSSVGGRM FT FPDTEREFVTQQSVMTRVGVDRILKFAFELAQSRPKRHLTSATKSNGISITMPYWDERV FT EAVAKSYPEVKWDKYHIDILTAHFVLHPDWFDVVVGSNLFGDILSDLGPACTGTIGIAP FT SGNINPEGDFPSVFEPVHGSAPDIAGQGIANPIGMIWSGAMMLEHLGEKQAADSIVKAI FT ERTLEERTLRTRDLGGQADTSACGKGVAEMVE" FT CDS complement(204106..204945) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1743" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N908" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27184.1" FT /translation="MKDWYAVFALALVIIIGCAAGLVGTLAFLLAFFVTWYLLSARELG FT FAQARAAFGVRFDPPIWTRSNWLWLERLFDDSDKLLKAAAVAMIVMASTLMIGAPITLL FT VAVLIAAYLAFSIHRDGPTPPRRVVRIHDAGADVSAHANRSTLIPPPTNTTQSSAVLAP FT AVTPAQQVAEPAPLLLGPFTRIVAPRPREVTKPRPSQNRRPISRGARKAASKRQQRKAA FT RNPARPLPPLPSRKPGYAIALKPRRPLRQPPQLRQRRRLRKPMTLMRASAAGSSPTR" FT misc_feature complement(order(204595..204660,204859..204924)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(204874..204945) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.959) with cleavage site probability FT 0.233 atresidue 24" FT CDS complement(205086..206000) FT /codon_start=1 FT /transl_table=11 FT /gene="serA" FT /locus_tag="RPA1744" FT /product="possible phosphoglycerate dehydrogenase (serA), FT Nter fragment" FT /function="InterPro IPR001687:IPR006140 COGs COG0111" FT /EC_number="1.1.1.95" FT /db_xref="GOA:Q6N907" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N907" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27185.1" FT /translation="MHAVFVDASDTLAELMERMATPDDPPVKIHCDPDVTPEQLPEVLA FT GAAIALIDHTYLPTEVARRCTGLKHVVFLGTGARSYMNIEELAELGIEVHLIRGYGDTA FT VAEATIALMWAASRNLAIMDREMRQGQWLREDGMQLTGKTLGLIGFGGIGAEVARIAHG FT SGMKVIAWNRSTKDVDGVRFVDLDTLLRDSHVVSMHLLLNDETRGFLSRQRIAAMRPGA FT ILVNTARGALVDESAMIDALRSGHLRHAALDVFDIEPLPAGHPLTALPNVTLSAHSAFR FT TPEASENLIAAARAHCRRIAAAS" FT CDS complement(206035..207285) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1745" FT /product="N-carbamoyl-beta-alanine amidohydrolase" FT /function="InterPro IPR002933 COGs COG0624" FT /EC_number="3.5.1.6" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N906" FT /db_xref="InterPro:IPR010158" FT /db_xref="UniProtKB/TrEMBL:Q6N906" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27186.1" FT /translation="MTKTASNLQIDSSRLWDTIVSTAQFGGTPKGGVKRLTLSVEDKQV FT RDWFRQACEQAGLEVSIDSLGNMFALRKGRDMSKPPIGLGSHLDTQPTGGKFDGILGTL FT AALEVIRTLNDAGIETELPLCITNWTNEEGSRFAPAMMGSAAFVGDFTVEDVLSRKDAA FT GISVAEALDSIGYRGNKPVGAQPFTGFIELHIEQGPILEAEGKTIGVVDHGQGVLWYDG FT KITGFESHAGSTPMHLRRDALATLSEIVLAVEKIATELGPNAVGTVGEAVIASPSRNVI FT PGEIAFTIDMRSADATIMDQLDQRLRAAVAEIAPRRKVEVALDLVWRKEPTHFDPALVG FT SVESAANALGYQNRRITSGAGHDACNLNTRIPTAMIFVPCKDGISHNELEDATQPDCAA FT GANVLLHTVLSLAGVAK" FT CDS complement(207355..208305) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1746" FT /product="transcriptional regulator, LysR family" FT /function="InterPro IPR000847:IPR005119 COGs COG0583" FT /db_xref="GOA:Q6N905" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6N905" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27187.1" FT /translation="MVDFKALETFIWVVTLGSFRGAAHKLNTTQPAISQRIAQLERELG FT VRLLQRDHRVASPTPSGRQLMLYAEKLIRLRTEMMAAVSDQSSMRGVLRLGVAETIVHT FT WLPRLIEQVNRVYPNLSLEIEVDITPNLRARLLAQEIELAFLLGPMTASTVRSRVLCEY FT PIGFLASPSLGLGNGPLTVADLAKFPIITFPRKTQPYEIVRSLFNKPELPPIRLHASAS FT LGTVIHMAIEGLGIAVIPTAIVENELAEGRLQLLQTDLKISPLRFSASWLASPDTVAIE FT RVAELAAEIAHTGGFMPDPAMQLRDIAHVVEPAIG" FT CDS 208421..209239 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1747" FT /product="conserved hypothetical protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR016938" FT /db_xref="UniProtKB/Swiss-Prot:P61788" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27188.1" FT /translation="MTVFAAEQQFHDAERPLPSHQARLACRAGLAETTAGVAPGFVQGN FT LAILPEKYAAAFHRFCQLNPKPCPIVGMSDVGNPMIPSLGIDLDIRTDLPRYRVWRDGE FT LVEEPTDIVAHWRDDLVAFVIGCSFSFEEALLADDIPIRHIEEKVRVPMYRTNIPCAPA FT GPFSGPMVVSMRPLKPKDAIRAIQITSRFPSVHGAPVHIGLPQSIGIADIAKPDYGDPV FT PIGPDELPVFWACGVTPQAVIAAAKVPFAITHAPGLMLVTDLKNKHLAVL" FT CDS 209297..210544 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1748" FT /product="putative branched-chain amino acid transport FT system substrate-binding protein" FT /function="InterPro IPR001828:IPR006311 COGs COG0683" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6N903" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27189.1" FT /translation="MKINRRNLVLGGAASAALLPFATARAETKEVVIGVIYPLSGSSAQ FT IGVDAQKAFQTAAELINNKYDFDLPLARGEGLPGLGGAKVRLVFADHQADPQKGRAEAE FT RLITQEKVCAIVGTYQSAVAVTVSQVCERYQVPFLSADNSSPSLHRRGLKYYFRPAPHD FT EMFSQAMFDFFDALKKKGQKIETLALFHEDTIFGTDSSNAQLKLAQERGYKIAADIKYR FT ANSPSLTAEVQQLKAADADVLMPSSYTTDGILLIRTMGELGYKAKNIVAQDAGFSEKAL FT YDAVGDKIPGVISRGSFSIDLAQKRPMVGKINDMYKEKSGKDFNDYSSRQFMGLIVMAD FT AINRAKSTDGEKIRDALAATDMPGEQTIMPWSRVKFDETGQNTFADPVLLQYVGGKFVT FT IFPTQAAVADAIWPMP" FT sig_peptide 209297..209377 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.769 atresidue 27" FT CDS 210717..211550 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1749" FT /product="putative branched-chain amino acid transport FT system permease protein" FT /function="InterPro IPR001851 COGs COG0559" FT /db_xref="GOA:Q6N902" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q6N902" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27190.1" FT /translation="MGLLYGLVAVGLALIFGLMDVTNFAHGEFLMLAMYITFFLFAFFA FT IDPILAAPLVGAAMFVFGAVIYLLVVRFAMRARANIGMVQIFTTFGLAILMRGLAQYFF FT TPDYRSINVSWLGGKTLEIGGVFLPVPQLVGALVSIAAFGALYFFMKKTDFGRALEATR FT EDAGAVALVGIDKNKVFALGWGLGSALIGLAGAVMAIFFYIYPDVGASFALIAYVTVAL FT GGFGSVFGAFAGGIIVGLVEATTAMILPPSLKSIGIYAVYLLVVFIRPRGLFGSI" FT sig_peptide 210717..210890 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.892) with cleavage site probability FT 0.469 atresidue 58" FT misc_feature order(210726..210779,210798..210851,210861..210929, FT 210963..211031,211089..211157,211260..211328, FT 211371..211439,211452..211520) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 211550..212536 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1750" FT /product="putative branched-chain amino acid transport FT system permease protein" FT /function="InterPro IPR001851 COGs COG0559" FT /db_xref="GOA:Q6N901" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q6N901" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27191.1" FT /translation="MDKAHLKRRRRDLIVAALLAAAAACAPLFIKDVYVQNIMVLTLMY FT AALSQGWNILGGYCGQISLGHALYFGLGAYTTALLFTKLGVLPWFGMIGGGIISSVIAL FT ALGYPTFRLRGHYFVIATIVIAEIGFLLFHNWDWAGAALGIDIPVRGDSWAKFQFTRSK FT LPYYYFALVFCCLAWLITWWLEDSKWGYWWRAVKDNPDAAESLGVVVFNSKMGAAAVSA FT FLTAVGGSFYAMFVSYIDPESVMTFQFSLLMALPAVLGGIGTLWGPVLGAAILIPLTEL FT TRSFVGGSGRGVDLILYGSVIVMIALARPEGLIGLFSRRPASKGVPQ" FT sig_peptide 211550..211624 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.997) with cleavage site probability FT 0.724 atresidue 25" FT misc_feature order(211586..211639,211649..211717,211736..211795, FT 211805..211873,211892..211951,212042..212101, FT 212198..212266,212309..212377,212432..212500) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 212533..213267 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1751" FT /product="putative branched-chain amino acid transport FT system ATP-binding protein" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG0411" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N900" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N900" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27192.1" FT /translation="MSETLLETRGVWQRFGGLVANSDVSIKVGRGEIVGLIGPNGAGKS FT TLFNLIAGVLPPTQGSIIFDGEDVTKLPATARCARGIGRTFQVVKSFESMTVIDNVIVG FT ALIRTTVMREARRKAHEVLKFCGLDGRADVLASQLIPSEKRRLEVARALATEPKLLLLD FT EVLTGLTPTEAEKGVELVRRVRDAGITVLMVEHVMEIVMPLVDRAIVLDLGKVLTEGKP FT ADVVRDPKVITAYLGDRHAVGA" FT CDS 213251..213955 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1752" FT /product="branched-chain amino acid transport system FT ATP-binding protein" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG0410" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Z9" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27193.1" FT /translation="MLSVREVTTAYKGLVAISNVSIEVEQGEIVCVAGANGAGKSTLLK FT SIAGAERIRSGQVLFDGERLDGVPQHVITKRGVAYVPENRRLFPRLSVHDNLRLGSYLY FT RGEADREKPLEFVFSLFPRLQERLEQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQ FT GIMPKLVSEIFQSVKKIRDAGMTVLIVEQRMAECLEIADRAYILQTGRVLMQGKAAELM FT DNPDVRKAYLGL" FT CDS 214149..214928 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1753" FT /product="conserved hypothetical protein" FT /function="COGs COG3622" FT /db_xref="HSSP:1K77" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27194.1" FT /translation="MPRFAANLSLMFTEHAFLDRFDAARGAGFDAVEFLFPYEVEPSAI FT AERLQRNRLTQVLFNLPPGDWAAGEKGFAALPDKFDELQRSLHSALPYALATGVKRLHL FT LAGNADRRDAAAALAFRRSLAVAAHFFAPHGIDVLIEPLNRRDAPGYFLDDVDYAHALV FT REMAIANLKLQFDVYHCQILHGDVTTRLREMLPMIGHVQIASVPSRHEPDGEELNYPFL FT FDELDRLGYAGFVGAEYRPRGKTEDGLGWFKPYRAGT" FT CDS 215141..218335 FT /codon_start=1 FT /transl_table=11 FT /gene="ragC" FT /locus_tag="RPA1754" FT /product="putative cation efflux system protein" FT /function="InterPro IPR001036 COGs COG0841" FT /db_xref="GOA:Q6N8Z7" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27195.1" FT /translation="MIALVCIALSRPYTFVVLALLLLIVGPLAALRTPTDIFPEIRIPV FT IGVVWQYTGLPPDQMAGRITTPFQRALTTTVNDIEHIVANSYGGFGIVKIFFQPNVDIR FT TANAQVTAISQTLLKQMPPGATPPLILNYSASTVPILQLALSGEGMTEQSLADLAINQL FT RTPLVTVPGAAIPWPFGGKQRQIQIDLDPSALQARGLSGQDVANALAAQNLITPVGTQK FT IGEFEYIIQLNNSPLKIEELGNLPIKAVGGAMVYIRDVASVRDGNPPQTNIVHVDGNRS FT VLMMVLKAGAVSTLDIIAGIKQKIIDVKGAMPESLKIALIGDQSVFVRGAITGVAVEGV FT IAALLTSVMILLFLGSWRSTIIIAVSIPLSVLGAIICLSAIGETLNIMTLGGLALAVGI FT LVDDATVTIENINWHLEQGKEVEPAILDGANQIVTPAFVSLLCICIVFVPMFFLQGVAR FT YLFVPMAEAVMFAMAWSFLLSRTLVPTMAKYLLKPHVHHDSLSGRKPSRNPLVRFQQAF FT EGVFARFRHGYGDLLTLAMGHRRAFVAGFLGVVALSFALVPYLGRNFFPSVDAGQILMH FT VRTQVGTRIEETANQLAEVQKAIRKIIPPDQIETLTDNIGMPISGINLTYNNTGVIGTQ FT DADIQIKLKGEHRPTEQYVKILREQLPRQFPGMTFAFLPADIVSQILNFGAPAPIDLQI FT RGANLPANFDYAGKLLAKIKRIPGVADARIQQSPNNPTFNIDVDRTRAQYVGLTERDVT FT NSLVVNLAGSSQVAPTYYLNPENGVSYSIVMQTPQYHVDSLSKLETIPVSASGAAAAGA FT PILGGLAEIKRSAGNAVVSQYDIQSIVQIFATTQGRDLGAVAADIRKVIDETKAEVPKG FT SSVVLLGQVETMNSAFAGLLFGLLGAIVLIYLLIVVNFQSWADPFVIITALPAALAGIV FT WMLFATGTTLSVPALTGAIMCMGVATANSVLVISFARERYAVLGDPVQAALESGFVRFR FT PVLMTALAMIIGMAPMALGLGEGGEQNAPLGRAVIGGLLFATFATLMFVPVVFSMVHKK FT QPASNAEPAPEISHAH" FT sig_peptide 215141..215239 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.925) with cleavage site probability FT 0.533 atresidue 33" FT misc_feature order(215159..215227,216131..216199,216218..216286, FT 216296..216364,216425..216493,216506..216574, FT 216764..216823,217799..217867,217886..217954, FT 217967..218035,218093..218161,218204..218272) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 218325..219527 FT /codon_start=1 FT /transl_table=11 FT /gene="ragD" FT /locus_tag="RPA1755" FT /product="possible cation/heavy metal efflux pump, HlyD FT family secretion protein" FT /function="InterPro IPR006143 COGs COG0845" FT /db_xref="GOA:Q6N8Z6" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27196.1" FT /translation="MPTDQPPRRSRRGLGIAGVVLACGAVAIVVTGISAREKSSAELRT FT WTDEQAISSVAVTRPDGKAPTATLDLPGRLEAYSRAPIYARVSGYVKSWSADIGAKVKA FT GEVIAEIEAPDLDQQLLQARADLASQQASAKLSEATLNRRKTLVASNFVSAQEIDERTA FT DLAAKKAAVNSGQANVERLEALAGYKKITAPFDGVVTERNTDVGALINAGSSSGPAMFV FT VSDIAKLRVYVNVPQNYAPLVRIGGKAVIALPEYPGRTFPATVEASSQAVDVASGTMRI FT QLGLDNAKGELMPGGFANVKLALVRDSAPLHIPASALIFNRSGLRVATVGSDDRVQLKP FT VTIARDLGREIELSAGLTADDRIIIAPPDGIANGEKVRVVADDAAKAGKPTASEKQDVK FT G" FT sig_peptide 218325..218408 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.879) with cleavage site probability FT 0.698 atresidue 28" FT misc_feature 218361..218429 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(219695..221209) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1756" FT /product="possible acetyl-CoA acetyltransferase" FT /function="COGs COG0183" FT /EC_number="2.3.1.-" FT /db_xref="GOA:Q6N8Z5" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27197.1" FT /translation="MPTTLPPERIPVIAGVGEIADHPKDIAQGLEPLALLEAAVQRAGD FT DSAVSLLPQIDSLDVVNFLSWRYHAPAEQLATRLGIAPRHCFYGPVGGESPIRFIHEAA FT LRIARGEAKVAVVCGAEAQSTATKAARAKLDLPWTPFAHDAPEPKRGAAFQQPIASTLG FT VARPITVYPLYEAATAAHWGQTPRQALDESGVLWSRYAAAAERNPNAWIKRAFAPNEIT FT TPSSDNRLIAWPYTKLMVANPSVNLGAAVLLTSLAKARAAGIPEDKLIYIHGGASAEEP FT RDYLARDQFVQSHAQNAVLETIKAMVGGDGRAFDAIELYSCFPVVPKMARRTLGLGDDV FT EPTVTGGLTFFGAPLNTYMTHAACAMARRLRDGAKVGLLYGQGGFVTKHHGLIVSGTPP FT QQPLSEDVSVQAKADAAYGVVPRFVTEASGDGTVETFTVIYDGRGEVQHGVVMLRTVDG FT ARALARVPAQDQATLAFLTDMDRSAVGTRGPIVTAADGVLEWRSAG" FT CDS complement(221249..222028) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1757" FT /product="possible oxoacyl carrier protein reductase" FT /function="InterPro IPR002198:IPR002347 COGs COG1028" FT /EC_number="1.1.1.100" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Z4" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27198.1" FT /translation="MSIFDLSGRVAVVTGGNGGIGLGMAQALAAAGCNVSIWGRNAVKN FT HAALATMANAPGKVEAQICDVTDPASVKAAMDATLKAFGRVDGCFANAGIGGGGRQAFI FT DRTEEQWRSMFATNLDGVFHAFQAAARHMTERAADGDPFGRLVATSSLASIFGTARNEH FT YAATKAAINALVRALAVELARYGVTANAILPGWIKSDMTAGIMGNDKFVANVMPRIPVR FT RFGEPEDFGGIAVYLMSKASSYHTADTFVIDGGYTAF" FT CDS 222196..222996 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1758" FT /product="putative enoyl-CoA hydratase paaG" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.17" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Z3" FT /db_xref="InterPro:IPR001753" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27199.1" FT /translation="MQFKHVTLDFDGPVAILKLDHQEVMNAVSIDMLGGLGEALDAIED FT KRAEVRCLVITGAGRAFCTGANLQGRNSGNNMSQSGKGAGAALETAFHPFLRRLRKLHC FT PIVTSVNGPAAGAGMSFALMGDMILCAKSSYFLQAFRRIGLVPDCGSTWLLPRLVGKAR FT SVELSLLGEKLPADKALEWGLVNRVYEDAELWAETMKLAHDLANGPTIALSLIRKLYWD FT SPENSFEEQLNLEFECQRVAGSTDDFKEGVGAFLEKRPAQFKGK" FT CDS 223004..223999 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1759" FT /product="Tyrosine protein kinase:Aminoglycoside FT phosphotransferase" FT /function="InterPro IPR001245:IPR002575 COGs COG3173" FT /db_xref="GOA:Q6N8Z2" FT /db_xref="InterPro:IPR008266" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27200.1" FT /translation="MAVAAIAGALTQSVIGWCAGATGIRDLAQLSGGASQETWSFVIEQ FT PDGDIAAILRRSPPGYGSVSGRAAGLDVEAELMRLAHEAGVPSPQVLHVLTEADALGAG FT FVMRRVDGETIPRKILRDAEFAEARPKLARQIGIILAGLHGIDSAALPPLRTISSTEEI FT GLLRDDYRSFDWPRPVFELALRWLTDHDPGASKATTLVHGDFRHGNLIIGPDGVRAVLD FT WELAHRGDPMEDLGWICVNSWRFGEIDKPVGGLGSREEMFAGYEAAGGHVDETRVKFWE FT VMGTLRWGIMCCGMMRRFRESPDHSMERAMIGRRSSETEIDLLRLLAPRS" FT CDS 224018..224392 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1760" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27201.1" FT /translation="MQDEPRPDELIKAVADFLREQIVPQISGHAAFKLRVGINALDLVT FT RQLALSGESDAEEHASLKALFGHDGSLFNLNAELADCIASGAVDLSTPGVKDHLWRTTL FT AKLAVDQPNYASYRREMEQK" FT CDS complement(224724..225503) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1761" FT /product="putative enoyl-CoA hydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Z0" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6N8Z0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27202.1" FT /translation="MALQFSTVTRKGPITIVTLSRPEVYNALHTDAHYELEGVFNEFAA FT DPEQWVAIVTGAGDKAFCAGNDLKWQASGGKRGWGESGFGGLTSRFDCDKPIIAAVNGV FT AMGGGFEIALACDLIIAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTAR FT HVKAQEGYELGFVNEVVPQGEALAAAERWAETICTVSPMSIRASKQTLSRGLEVSLPQA FT IAEQRDYPAVKAMVASQDYIEGPKAFSEKRAPNWQGK" FT CDS 225572..226903 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1762" FT /product="putative acyl-CoA dehydrogenase" FT /function="InterPro IPR006090:IPR006091 COGs COG1960" FT /EC_number="1.3.99.3" FT /db_xref="GOA:Q6N8Y9" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27203.1" FT /translation="MLIGRLTRSTTTRRLWEHALDFSLPPDLVAYLAELDRFIESKIKP FT LEQADDNIRFFDHRREWARTDFEHGGLPRHEWEDLLRKAKNLADDAGHLRFAIPKRYGG FT QDGTNLWMAVIREHFAAKGLGLHNDLQNEHSIVGNFPIVKMLDLYGSPEQKAMIDGSIT FT GKYRITFGLTEPDHGSDATHMETRAEEAVRDGKKGWVINGEKMWTTGMHVATHCALFAR FT TAGKDGDARGITCFLVPADAPGVKVEEYLWTFNMPTDHPRVSFKDVFVTEDAVFGEVGR FT GLSLAQCFVHENRIRQAASSLGAAVFCINESVKYARERKPFGEELARNQAIQFPLVELA FT TQAEMLRLLIRKTAWEMDQMTQAQVEHTLSDKVSMCNYWANRLCGQAADRAIQVHGGIG FT YSRHKQFEHIYRHHRRYRITEGSEEIQMRKVAGFLFGYMGANKR" FT CDS complement(227276..228853) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1763" FT /product="putative long-chain-fatty-acid CoA ligase" FT /function="InterPro IPR000873 COGs COG0318" FT /EC_number="6.2.1.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Y8" FT /db_xref="HSSP:1BA3" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27204.1" FT /translation="MSEATEPATLADVIRAQANTRGNEIAYEFEGRISTFADFDRHTNQ FT VARALQASGVQPNERIAYLGKNSDIYFELWSGAIKAKAVMAPVNWRLAGPEIAYIVEDC FT KAAILFVGPEFVDQVCGLKDQIPSVRHIITTEGGAPEWQDFTKWRDAQSSDDPQVAIAP FT SDIAIQLYTSGTTGKPKGAMLSHANFLSLVRAGQDNKPEWNRWSPDDVSLVAMPVFHIG FT GSGWGMMGIYHGAKGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRAREVDF FT SRLKYMLYGASPIPAALLKECIDVFKCGFVQMYGMTETTGTIVALPPEDHVEGLERMRS FT AGKALPGVEIAILDPDGKPLPPRQVGEIATRSGSNMVGYWNLPDATKKTIDGDNWLRTG FT DAGYMDEDGYVYIHDRIKDMIISGGENIYPAEVESAICDHPDVAEVAVVGVPDDQWGES FT VKAVVVMKPGKEATAQDIIGFTRTRIAGYKTPKSIDFIPALPRNASGKILRRQLRDPYW FT SGKDRQVN" FT CDS complement(229190..230062) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1764" FT /product="putative 2, 4-dienoyl-CoA reductase (NADPH)" FT /function="InterPro IPR002198:IPR002347 COGs COG1028" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Y7" FT /db_xref="HSSP:1AE1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27205.1" FT /translation="MFTDQLLAGRRILVTGGGTGLGKAMAARFLQLGAEVHICGRRKGV FT CDETATELMDQYGGKVMTYGVDIRDAAAVDHMVETIFESGPLTDLINNAAGNFISRSED FT LSPRGFDAVANIVMHGTFYVTHAVGKRWIAGGHRGNVVSITTTWVRNGSPYVVPSAMSK FT SAIHAMTMSLATEWGKYGIRLNTIAPGEIPTEGMSKRIKPGDEAGARTIKMNPMGRVGT FT MEELQNLATFLISGGCDWISGETIAMDGAQGLAMGGNFYQLRDWSNADWDQAKASIKAQ FT NEKDRAQRG" FT CDS 230170..230982 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1765" FT /product="putative enoyl-CoA hydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.17" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Y6" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27206.1" FT /translation="MNDRVSVTITDGVADVRLVRADKMNALDAAMFEALVNTTERLANE FT KGVRAVVLSGEGKAFCAGLDMGRFAAMKESGGNGIPGDEFRDLTKRTHGQANAPQQAVW FT GWRMLPVPVIAAVHGVAFGGGCQLALGADIRLISPDAKMSVMEIKWGLVPDMAGTPILA FT TLLRDDVLRELTYTGRIVAAQEAVSIGLATKIVDDPYQAALEMAREIAGKNPDAVRAAK FT RMMNKLSVDPGPALLAESVEQQKLIGSPNQTEAVRANLEKRAPNFIDA" FT CDS 231131..232675 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1766" FT /product="putative long-chain-fatty-acid-CoA ligase" FT /function="InterPro IPR000873 COGs COG0318" FT /EC_number="6.2.1.3" FT /db_xref="GOA:Q6N8Y5" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27207.1" FT /translation="MSENQLYHGIISGDRRRSFDEVNARVATIAGGLQALGVRPGDCVC FT VLMRNDIAFMEAVYGVMTLGAYAVPVNWHFKPEEVGYIIGDSATRVLIGHADLLHSVAS FT AIPADLTVLSVPTPPEVIANYKIAPDHLSPPNNAIDFDGWLAQQKPYDGPAQPQPQNMI FT YTSGTTGHPKGVKRFAPTPEQAAHAEKMRATIYGLKPQVRALCPGPLYHSAPNSFGIRA FT GKLGGVLVLMPRFHPEEFLQLVQEHKIDTVFMVPTMFIRLMKLPAEVRAKYDVSSLRHV FT IHAAAPCPADVKRAMIEWWGPVIYEFYGSTESGAVTFATSEDALNKPGTVGKIAHGAEL FT KFIDDDGNEVPQGEIGEIFSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDMGYLDDDGY FT VFICDRKRDMVISGGVNIYPAEIEAALHAVTGVHDCAVFGIPDAEFGEALMAMLEPQPG FT VTLDESFIRSQLKLALADYKVPKHIKIMPELPREDSGKIFKRRLRDPYWANAGRVI" FT CDS complement(232672..234981) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1767" FT /product="sensor histidine kinase with a PAC motif and a FT response regulator receiver domain" FT /function="InterPro FT IPR000014:IPR000700:IPR001610:IPR001789:IPR003594:IPR003660 FT :IPR003661:IPR004358:IPR005467 COGs COG0642" FT /db_xref="GOA:Q6N8Y4" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27208.1" FT /translation="MSAKDGEILISNVEFEPIEQPSAKTPQHDAAALRPIIRVVTPVFS FT DEGARFGVLAATIDLRRPFELLRDPVRASSKIYVVDDRGHYLFHPDAPRGGLAIGFPST FT LEQDFPALAEALANNRWTPAVIESRNGDRFGVAYQPMNAGTETPLALVEAIAEHDMIRG FT PMLAWGKSTLVGGSFAVLVAIALAVAFARSLARPLSEMTRAVESVRGGGPLTLPRNAGG FT EIGVLAEAFSSTMQESREKTAALRREKEIFESIMNAMAEAVLLVDTEGVIVYENPAAVA FT LRTSPTGITGPTWETSVESFLADGVTPLEVDQRPGRRAMRGEPIDRFEFVVHVLGSDKI FT VYVSGNARPIREADGTISGAVVVFSDVSELKETERRLHQAQKLEAIGQLTGGVAHDFNN FT MLTVISGTAEILLDELTDRPDLVTIAKMIDQAAERGADLTRQLLAFARKQPLQPRNIDV FT NTVVSNIKQLLRPTIGEHIAIDTRLDPTVDPALIDPSQLSSALLNLAVNARDAMPNGGK FT LLFETANVMLDDDYAEHHPEVKPGRYVMIAVSDSGFGMAPDVLEKAFEPFFTTKSVGKG FT TGLGLSMVYGFVKQSNGHVQIYSEEQHGTTIRLYLPRADSDIDALPSITPVEGGTETIL FT LVEDDELVRNFALAQLRGLGYRTIAAADGAAALAEVRRGTPFDLLLTDIIMPGGMNGRE FT LADAVARLRPVKVLYTSGYTENAIMHHGRLDPGVLLLSKPFRRADLARLVRAALNRADH FT QTSGDTAGTDRKSAAN" FT misc_feature complement(234397..234462) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(235233..235427) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1768" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27209.1" FT /translation="MSTAMLTASGVGYLGYRNIAPVAIERTLAGLDANASWQARELSHL FT VNGASADLMGFRQIMASTS" FT CDS complement(235633..236523) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1769" FT /product="transcriptional regulator, LysR family" FT /function="InterPro IPR000847:IPR005119 COGs COG0583" FT /db_xref="GOA:Q6N8Y2" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27210.1" FT /translation="MTLEQLRIFIAVAEQQHMTRAASGLNLTQSATSAAIAALEARHGV FT KLFDRVGRGIVLTQAGRDFLGEARAVLARARAAAQALDDIAGLKRGSLSVAASQTAGNY FT WLPQRLLRFRQHYPGIALQLTITNTEQVAAIVREGRADLGLIEGDVDDPLLSATPIGGD FT DLVIVVGRDHPWRSLQRLTAAKLTTTGWVLRERGSGTRAMFEAALQRSGLELSDLEVRL FT ELPSNEAIRAAVESSDCATAISGLVAAPSLAAGTLYSLRFDLPRRAFHLLRHKEHSNSQ FT AEKALLAELSATSAS" FT CDS complement(236520..237584) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1770" FT /product="conserved hypothetical membrane protein" FT /function="InterPro IPR001638 COGs COG2855" FT /db_xref="GOA:Q6N8Y1" FT /db_xref="InterPro:IPR018383" FT /db_xref="UniProtKB/Swiss-Prot:Q6N8Y1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27211.1" FT /translation="MSLITNAKLYPPRHPRAVHLAHHLAAIAPGVLVTAAIAAAAVGLR FT AIPGMPGISPMLLAILIGIVAHNGIGTPSWAVPGVKFSLRRVLRFAIILLGLQLTTAQL FT IEVGGEGLAIIAATLLATFCFTVWFGRVLGVDRKLTELIAAGTSICGASAIIATNTVTR FT ADDEDVAYGVACVTVFGSLAMVSYPLLQSVLNLDAHGFGLWTGASIHEIAQAVAVSFQG FT GQRAGEFGTIAKLSRVMMLAPLVIGLGMLARVRAKHQPAGDHTATPPMPWFVLGFVAMI FT GVNEFVAIPHEAKSWIVAITAFLLSMALAAMGLETDLRKLAARGLRPALLGLTASLFIA FT GFSLALIKLTGWHG" FT misc_feature complement(order(236532..236597,236643..236699, FT 236721..236777,236823..236879,237012..237077, FT 237093..237158,237180..237245,237258..237323, FT 237345..237410,237456..237521)) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(237462..237584) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.920) with cleavage site probability FT 0.605 atresidue 41" FT CDS 237863..238645 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1771" FT /product="hypothetical protein" FT /function="InterPro IPR000694" FT /db_xref="UniProtKB/TrEMBL:Q6N8Y0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27212.1" FT /translation="MTNLQSDAPRTKWHSGIGGFFVGEWPYLLMLLLALFGVAYTSFSE FT TSIYWVILAPFIGLVCVVSRWREARAVDQHVYLVVSQALHWGAVLLSMQLMSLQVTRQL FT SGLAAALGVLTLLALGTFTAGLHIRAWKIALVGVILGISVPAIAFLQQSALLILLVIGL FT IVAIVVPFIWARRRPETTPEPLFQPPFARAATPPAATAAHPVPQPSLYETPVTTPMPVA FT PPPAPTPTAAEPASPSPGAPAADDESRPDNVRNISGSR" FT misc_feature order(237923..237991,238001..238054,238088..238156, FT 238172..238240,238259..238312,238322..238381) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 238746..241556 FT /codon_start=1 FT /transl_table=11 FT /gene="ppc" FT /locus_tag="RPA1772" FT /product="putative phosphoenolpyruvate carboxylase" FT /function="InterPro IPR001449 COGs COG2352" FT /EC_number="4.1.1.31" FT /db_xref="GOA:O32483" FT /db_xref="HSSP:1JQN" FT /db_xref="InterPro:IPR015813" FT /db_xref="UniProtKB/Swiss-Prot:O32483" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27213.1" FT /translation="MSSLNLSAGPEPVSERPDDAAAIEAETRLRNDIRLLGRILGDTVR FT EQEGQSVFDLVENIRQTSIRFHRDDDKTARAELAAILDGMSIQDTMRIVRAFSYFSHLA FT NIAEDQNNIRQMRAGSTAGSAPRAGLLAKTLAHARQEGISAAELRKFFATALVSPVLTA FT HPTEVRRKSTMDREMQIAGLLDQRDRVQLTADEWTDNEERLRRAVETLWKTNLLRRTKL FT TVLDEVTNGLSFYDYTFLREVPRLHSALEDRLADAAKAEGANAEGELASFLRMGSWIGG FT DRDGNPFVTAEVLHGTLKLQSTRVLRYYLEELHELGSELSLASHLAGTTDTVKALAETS FT PDTSPHRKYEPYRLAVSGIYARLAATALKLEVENLRAPVGEAEPYASAQDFKADLDAIH FT LSLTTHHSGVIARGRLRQLRRAIDCFGFHLASLDMRQNSAVHERTIGELMDAARPGTSY FT AVLDEDARIALLISELRSTRPLTSMFVKYSDETVGELAVFREAAKAHATYGAAAIPQCI FT ISMTKGVSDLLELAVLLKEVGLIDPSGRSAINVVPLFETIEDLQACAKIMDRLLSIPEY FT RRLVDSRGSVQEVMLGYSDSNKDGGFVTSGWELYKAEIGLIEIFEHHGVRLRLFHGRGG FT SVGRGGGPSYDAIVAQPGGAVNGQIRITEQGEIITSKYSNVEVGRNNLEILAAATLEAS FT LLQPKRVAPHRDYLEAMEQLSALAFKAYRGLVYETDGFVDYFWASTVINEISTLNIGSR FT PASRKKTRAIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVSAWVTEHPEKGIAFLQAMYQ FT EWPFFRTLLSNMDMVLSKSSIGIASRYAELVEDTAIRDRIFSRIRAEWHSSIDYLLAIM FT QQDHLLQSNPLLERSIRHRFPYLDPLNHVQVQLLREHRTHDPDEQVLRGVQLTINGISA FT GLRNSG" FT CDS 241694..242023 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1773" FT /product="putative DMT superfamily multidrug-efflux FT transporter" FT /function="InterPro IPR000390 COGs COG2076" FT /db_xref="GOA:Q6N8X9" FT /db_xref="InterPro:IPR000390" FT /db_xref="UniProtKB/TrEMBL:Q6N8X9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27214.1" FT /translation="MKWLYLLIAIVAEVVGTSALKASQGFTVLLPSVLVVVGYGAAFYF FT LSLTLSSISVGIAYALWSGIGIVLISAVGWLWFGQALDTAAIIGIAFIIAGVGIINFFS FT NVSAH" FT sig_peptide 241694..241759 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.653) with cleavage site probability FT 0.567 atresidue 22" FT misc_feature order(241769..241837,241856..241924,241934..242002) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 242432..243757 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1774" FT /product="OmpA/MotB domain, possible porin" FT /function="InterPro IPR000104:IPR006665 COGs COG2885" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8X8" FT /db_xref="InterPro:IPR006665" FT /db_xref="UniProtKB/TrEMBL:Q6N8X8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27215.1" FT /translation="MLYLVTHYWIWLAAAFVVGAVTPLLADKFGWAADLENYWVSRVGV FT VLAVALVLVLAQLASGKAELLLEAGIGLVIAYVAGGLAGGIAPGLLPVRFEGWWVGLFA FT TGLILAVFGITTLPKLEPDLRERVADVVKEAGADPLNFDVAGRDVLLPADLGSDKVRAS FT LGEQILKVPGVRRVADVDELSGSALAAKTVAKLQAEAEAKAKAESAAKEAAAKEAAAKA FT AKDAAQKHAAAKAKADSEAKEAAAKAAAEAAAKEAAAKEVAAKEAAAKAAAEAAAKQAA FT ADEAAKKAADEAAKQAAAKPAAAPAEIKTANATGALPSSPAQDCQGRVSALASAEKISF FT ERRSAVIDKASQPLLDKLAAAIKQCPAVTIEVAGYTDGAGKKSANIALSKRRAEAVVAS FT LTKVGIGSVKLVAEGYGSAKPIAANDTAEGRAQNRRIEFVVK" FT sig_peptide 242432..242512 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.931) with cleavage site probability FT 0.912 atresidue 27" FT misc_feature order(242441..242509,242546..242614,242642..242710, FT 242723..242782) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT terminator 243791..243808 FT /note="TransTerm prediction, 98+%" FT CDS complement(244003..244917) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1775" FT /product="putative dehydrogenase" FT /function="InterPro IPR002198:IPR002347 COGs COG1028" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8X7" FT /db_xref="InterPro:IPR002198" FT /db_xref="UniProtKB/TrEMBL:Q6N8X7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27216.1" FT /translation="MAKALDGKVIIVTGAGRGIGREIALLAAREGAKVVVNDPGVASDG FT SGTDAAPAEQVVEEIKKEGGIAVANFESVAEAIPASKIVKQAVDTYGKLDGVVNNAGIL FT RDAIFHRMSIDAFEQVIKVHLMGTFYVSHAAARLFREQESGSFVHFTSTSGLIGNFGQA FT NYAAAKLGIVGLSKSIALDMQRFNVRSNCVSPFAWSRLIGTIPTETEAEKARVARMQQM FT GPEKIAPLSVYLLGDAAKDVSGQIFAVRMNEIFLMGQSRPIRSVHRDGGWTCESLAEHG FT MPALKGSFYKLDRSADIFNWDPV" FT CDS complement(245202..246341) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1776" FT /product="possible lipid transfer protein" FT /function="InterPro IPR002155 COGs COG0183" FT /db_xref="GOA:Q6N8X6" FT /db_xref="InterPro:IPR002155" FT /db_xref="UniProtKB/TrEMBL:Q6N8X6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27217.1" FT /translation="MRRNQVAIVGAAETTKLGVIPDMSQIQLHADAALNAIADAGLKLS FT DIDGIATAVETPQQIAHYLGITPTWVDGTSVGGCSFMLHVRHAAAAIEAGLCKTVLITH FT AESGKSMIGKLPRSIPADSLQGQFEAPYGIYGPPSQFPIPVLRFMKTHGITHEQIASVA FT VVQREWAAKNPRAMMKDPITVADVLNSRMIAYPFRLLQCCLVTDGGGALIMTSADRAKD FT FPHKPVYVLGTGESVETPMVSQMETFNSSRAFKVAGPTAFREAGISHSDVDHLMIYDAF FT AHLPLFGLGDLGFMPYEETGKFIADGNTRPGGKLPLNTNGGGLSYMHSGMYGMYALQES FT VRQMRGIAPAQVPNAKISVCHGVGGMFAASGTIIFTNEK" FT CDS complement(246347..246760) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1777" FT /product="DUF35" FT /function="InterPro IPR002878 COGs COG1545" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR002878" FT /db_xref="UniProtKB/TrEMBL:Q6N8X5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27218.1" FT /translation="MAEPARARPKITPETQHYWDGAKQGELRLQRCDSCAHAYFPPRPF FT CPKCGSREVSVFKASGKGTLYSYVINHRPLAAGFTEPYAIAVVELEEGPRMMSNILECP FT QTPEALELDMKLEVTFQKIDDNLTLPQFRPAKG" FT CDS 247047..248405 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1778" FT /product="putative Glu-tRNA amidotransferase" FT /function="InterPro IPR000120 COGs COG0154" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8X4" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/TrEMBL:Q6N8X4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27219.1" FT /translation="MDSMTRHPTLAALAADLEAGRTTARKLVEDCLARIADPAGEGARA FT FIHVDRDAALQAADAMDKLRAAKAAPSPFAGIPISIKDLFDIKGQVTRAGSRALDDNPP FT ADSDAPAVARLRRAGFVVIGRSNMTEFAYSGIGINPHYGTPKAAYRRNVGYVPGGSSSG FT AAVSVADGMAHAGLGTDTGGSCRIPAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPL FT ARSVECCATLDAILADQPVGPLIARPLKGMRIAVPTTVALDDLDAAVTAAFERALKTLA FT SHGVIIEKIEVPEFAEVGPLGAKGGFAAAESYAWHRYLIVAQGDVYDPRVRERILRGET FT QSAADYVDLVNARKSLIARASARLAPYDAVAMPTTAIAAPTIAELADDKAFTKANLLTL FT RNCTLINMIDGCAISLPCHQDGEPPIGLMLAGVNGTDREIFEVAAGMEAVIRG" FT CDS 248398..249084 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1779" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6N8X3" FT /db_xref="UniProtKB/TrEMBL:Q6N8X3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27220.1" FT /translation="MVDLAFTLDAAGSRTQLTLPITTAVIAGWTGRDPVARDHHIAELE FT AIGIARPASTPIYYRVAAARLATAPAIEVSGGDSSGEVEFVLIGHQGRILVGVGSDHTD FT RKVEAYGVTVSKQMCDKPVAPELWDFGDVEPHWDRIVLRSFATIGGTRVLYQEGTLDAM FT LPARELIARGFGGGALPDGTALFGGTFAAKGGIRPASRFEFEIDDPVLGRIIRHGYDVL FT ELPILG" FT CDS complement(249272..249862) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1780" FT /product="Phenylacetic acid degradation-related protein" FT /function="InterPro IPR003736:IPR006683 COGs COG2050" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q6N8X2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27221.1" FT /translation="MQPCNQSAPCWPFQTPSQTALQTLSALPAMLRCGLKVVSAARQAT FT TRMTTDPDPNHTAATDGIPDGFVRHARSSPLTAPWEPLYAKTTADAVTLGLRIRECHTN FT SRGLAHGGLITALADNAMGYSCGLKLGGGGQLLTSSLAIDFIGPAKIGQWLQIEPEVIK FT LGAKLCVAQCFVTADGTRCARANGTFSVVKAKE" FT CDS complement(250060..251232) FT /codon_start=1 FT /transl_table=11 FT /gene="phbH" FT /locus_tag="RPA1781" FT /product="4-hydroxybenzoate hydroxylase FT (4-hydroxybenzoate-3-monooxygenase)" FT /function="InterPro IPR000733:IPR002938 COGs COG0654" FT /EC_number="1.14.13.2" FT /db_xref="GOA:Q6N8X1" FT /db_xref="HSSP:1K0I" FT /db_xref="InterPro:IPR003042" FT /db_xref="UniProtKB/TrEMBL:Q6N8X1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27222.1" FT /translation="MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRA FT GVLEQGMVDLLDEAGVSARLHQEALVHGGFEIAFAGQRHPIDLRGATGGKSVTVYGQTE FT VTRDLMEARSAAGLTTIYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDGFHG FT ISRQSVPASAVQSFERVYPFGWLGLLSDTPPVSPELIYVNHDRGFALCSMRSMHRSRYY FT VQCPLTDDVADWSDDRFWDELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRL FT FLAGDAAHIVPPTGAKGLNLAASDVYYLSRAMREYYAEKSEAGIDAYSASALRRVWKAE FT RFSWWMTSQLHRFPDSDAFSQRIQTAELDYLVNSKAAITSLAENYVGLPY" FT CDS 251401..252411 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1782" FT /product="TrapT family, dctP subunit, C4-dicarboxylate FT periplasmic binding protein" FT /function="InterPro IPR004682 COGs COG1638" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8X0" FT /db_xref="InterPro:IPR018389" FT /db_xref="UniProtKB/TrEMBL:Q6N8X0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27223.1" FT /translation="MRKTLLALLLAASVTPALAQDKTVNWKVSLWVPPAHPLVPATKAW FT AEDIQKASGGSIRMTVFPSEQLGKAFDHYDMARDGIADVTYVNPGYQPGRFPIVSAGQL FT PFVFKDGKKGTLALNEWYHKYAPTEMKDTKLCFAFIHDPGALHGKKKVLLPSDLSGLKV FT RPAQSTIGEMVKLFGGTNVQASAPESRDALERGVADEITFPWGSVFLFGIDKVVKYHMD FT VPLYTTVFTYNIGLKAYNALSDAQKKIIDDHCTPEWASKVTDPWTDFEANGRVKMKALQ FT DHEVYPLTDAQLAEWKKATKPLRDSWAEQVKKSGGDPAAVESDLQNALKKYDAGL" FT sig_peptide 251401..251460 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 1.000 atresidue 20" FT CDS 252497..253150 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1783" FT /product="possible TrapT family, dctQ subunit, FT C4-dicarboxylate transport" FT /db_xref="InterPro:IPR007387" FT /db_xref="UniProtKB/TrEMBL:Q6N8W9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27224.1" FT /translation="MDSGLALRAPRNDDSLCSVISFNDRAPMPSNPDDKLRDRLPGALT FT TRRFSKNGMDRFIDAIEWIAAFFVGIVALNTFLAVFMRKFFSVTIPDYYNFGQFMLGVL FT IFWGIAATSYRGSHITVDLVWAAASPRWQRIIDIFATLVLLFVVSVQTYTLFDKVVTTK FT ADHIVTMDLQIPIWPFYLVSWIGDVSAVLLIAIRTFRLIFHPEQMREVRMKPVE" FT misc_feature order(252674..252742,252785..252838,252899..252958, FT 253016..253084) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 253157..254464 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1784" FT /product="TrapT family, dctM subunit, C4-dicarboxylate FT transport" FT /function="InterPro IPR000252 COGs COG1593" FT /db_xref="GOA:Q6N8W8" FT /db_xref="InterPro:IPR004681" FT /db_xref="UniProtKB/TrEMBL:Q6N8W8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27225.1" FT /translation="MLTNETVAAIGFVSLFVLMLLRVPVGMAMGLVGVTGFGYLTGFEP FT ALKLVGQTTMRTVTDYSFGVIPMFLLMGAFVSASGISRELFRAGNTIVGHWKGGLGIAT FT IAACGGFAAISGSSVATAATFSAVAYPEMRRFGYPQSFSTGVIAVGGTLGAMLPPSTVL FT AVYGIITQQDIGKLFIAGILPGLLAIVMHMITIWIIGVARPGFLPAGPKSSWGDRLAAF FT RDVWSPLLLFLFVIGGLYGGFFIPTEAGAVGAVGAFLIGILRGKLDREGILQSLLQATR FT TAAAVFTVLIGALCFGYFLTITQTPQYVTEFLTGLGIGPYGVLALILLMYLVLGCLMDA FT MAMVILTVPIVFPVVTALGFDPIWFGIIIVMTVELGLIHPPVGMNVFVIKSVIKDVSMS FT TVFAGVLPFVVTDLIRLVILIAFPIIALWLPMRMIG" FT sig_peptide 253157..253243 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.733) with cleavage site probability FT 0.419 atresidue 29" FT misc_feature order(253175..253243,253346..253414,253451..253519, FT 253592..253660,253685..253753,253841..253945, FT 254003..254062,254090..254158,254177..254245, FT 254255..254323,254360..254428) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 254632..255093 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1785" FT /product="conserved hypothetical protein" FT /db_xref="PDB:3C5O" FT /db_xref="UniProtKB/Swiss-Prot:P61167" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27226.1" FT /translation="MTPTLETKYVFTITARIGDVTSAGEIGTGVRRIIPILGGEVKGEG FT ISGQVLPFGADFQIIRPNELIELEAKYAFETDDGAVVYVENVGIRFGPVELLRKLKRGE FT PVDPKVIYFRTRPRFETGHPNYQWLMQYLFVGSAARHADRVVIDVHQVL" FT CDS 255391..256197 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1786" FT /product="putative 3-hydroxybutyryl-CoA dehydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.55" FT /db_xref="GOA:Q6N8W7" FT /db_xref="InterPro:IPR001753" FT /db_xref="PDB:3HIN" FT /db_xref="UniProtKB/TrEMBL:Q6N8W7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27227.1" FT /translation="MLTGNAQAATIADPSTLVVDTVGPVLTIGLNRPKKRNALNDGLMA FT ALKDCLTDIPDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQYC FT RVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGV FT ARMADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNFAVLQAL FT PMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKTAKVRPS" FT CDS 256206..258104 FT /codon_start=1 FT /transl_table=11 FT /gene="fcs2" FT /locus_tag="RPA1787" FT /product="putative feruloyl-CoA synthetase" FT /function="InterPro IPR000873 COGs COG0318" FT /EC_number="6.2.1.-" FT /db_xref="GOA:Q6N8W6" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q6N8W6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27228.1" FT /translation="MMDAMTDPITFAATAAGRDAAHPLRDISFGEIGIATERKPDGTIY FT VRSTTTLTDYPVRITDRLHHFAETAPDRVFMAERNGEGGWRRISYAEMLRAAQTIASAL FT IARGLSAERPVMILSGNSIDHAMVMFGALYAGVAMCPVSPPYSLVSKDYGKLRHIVGLL FT TPGLIFADDITAFAPAILATVPEDVELAATRGEVKGRKVTSLAELLATPEHPELAAKHE FT AIGHDTIAKFLLTSGSTGNPKAVINTQRMICANQVMIREAMAFLKDEPPVIVDWLPWNH FT TFGGNHNIGLTLFNGGSMYIDDGKPTPAGIASTIRNLREIAPTVYFNVPKGYESLLPVL FT REDQQLRKLFFSRLHAMFFSGASLAAHVWNGLDEVAVAETGARVPMLTGLGATETAPFF FT MSVTPQTSRSGHVGLPVPGNEAKLVPNNGKLEVRAKGPNITPGYWRAPELTDKAFDEEG FT FYKLNDALKPVDANDLSRGFDFDGRISEDFKLASGTWVSVGPLRAKFIAACASLVRDVV FT IAGLDRDYVTALAILDPDGCKLINATLPLEDLAGMAADHLIREAFRERFATLLTQATGS FT SNRVTRAVLLGEPLSIDKGEITDKGSVNQRAVLEYRASLIADLYADPPPAHVIALE" FT CDS 258343..258762 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1788" FT /product="possible 4-hydroxybenzoyl-CoA thioesterase" FT /function="InterPro IPR006683 COGs COG0824" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q6N8W5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27229.1" FT /translation="MFTNRREVQIQWGDCDPADIVYYPRYFAMFDDSTSALFVAAGCSK FT RDLIKVYGLVGIPMVDTRAKFYMPSTYGDVISIESRIERFGRSSFEVLHKVFKGEQLAL FT EGFETRVLVGRHPDDPSRLKSVAVPEEVKAKFMRG" FT CDS 258842..259999 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1789" FT /product="putative branched-chain amino acid transport FT system substrate-binding protein" FT /function="InterPro IPR001828 COGs COG0683" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q6N8W4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27230.1" FT /translation="MTKFKLSATAIAVALALPGLSGAALAETNEITIGITVTTTGPAAA FT LGIPERNALEFVAKEIGGHPLKVIVLDDGGDPTAATTNARRFVTESKADVIMGSSVTPP FT TVAVSNVANEAQVPHIALAPLPITPERAKWSVAMPQPIPIMGKVLYEHMKKNNIKTVGY FT IGYSDSYGDLWFNDLKKQGEAMGLKIVAEERFARPDTSVAGQVLKLVAANPDAILVGAS FT GTAAALPQTSLRERGYKGLIYQTHGAASMDFIRIAGKSAEGVLMASGPVMDPEGQDDSA FT LTKKPGLELNTAYEAKYGPNSRSQFAAHSFDAFKVLERVVPVALKTAKPGTQEFREAIR FT KALVSEKDIAASQGVYSFTETDRYGLDDRSRILLTVKDGKYVMVK" FT sig_peptide 258842..258922 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.987 atresidue 27" FT terminator 260039..260061 FT /note="TransTerm prediction, 98+%" FT CDS 260314..261132 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1790" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160 COGs COG2199" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N8W3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27231.1" FT /translation="MPSQIVTQRDVIRYTAGRVAAAAGITAIATIIFLISDLGTDWHAT FT VEVGAVVKASLVVALSVSTTLSGAMAYRSARLMRQLTSTRAELMRMSRTDPLTGLLNRR FT GFDEAAATQLAQANFAGQPVVAMMCDLDRFKAINDHYGHNIGDRVLAEIGDILRDFAAP FT RGMLIARHGGEEFAGLMVGVSDEQANDYALELCRLCATAVACDGRLVAVTMSFGLAAYR FT GGELSALMRRADLALYRAKDLGRTAWCSSTMATPCRWRPPNRQAGCEKPR" FT misc_feature order(260350..260418,260461..260529) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(261105..261824) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1791" FT /product="branched-chain amino acid transport system FT ATP-binding protein" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG0410" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8W2" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6N8W2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27232.1" FT /translation="MTALLSVSGVSVSYGKVEAVRNVSLDVRQREIVTVVGANGAGKTT FT LLSAAMGVLPLKGRVTFDGIDVARLDIEDRVAAGLSLVPEHRELFATMTVEDNLELGAF FT RIAKAVAAQSQERVYGLFPRLKERRKQLAGTLSGGEQQMLAMGRALMGAPKLLMLDEPS FT LGLAPIIVADIFRIVGELREAGVSVLLVEQNAKAALAIADRAYVMELGEFVLDGPASEV FT ARNEAVVASYLGFSHPA" FT CDS complement(261821..263593) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1792" FT /product="putative branched-chain amino acid transport FT system ATP-binding protein" FT /function="InterPro IPR001687:IPR001851:IPR003439:IPR003593 FT COGs COG0411" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8W1" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N8W1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27233.1" FT /translation="MPRWLPILLFAAVMTALPLIPGIPPFWIVLLDNIGLAALVAMGLV FT LLTGVGGLTSFGQAAFCGFGAYTTAYITTVYGISPWLALPASLVVAGIAAVLLGLMTVR FT LSGHYLPLGTIAWGIALYYLFSKLDFLGRNDGISRVPPLSIGPIDMYDPHTIYFVIWAM FT VLISAVLTMNLLDSRTGRAIRALRRGHVAAEAFGVQTARAKLLVFIYAAVLAGLSGWLY FT AHFQRNVNPTPFGPQAGIEYLFIAVVGGAGYVWGGVLGAAIVIILKEVLQGYLPLLFGG FT QGQLEIIVFGILLVVLLQLAPGGVWPWLANLVPLKFRRAVTGNADGLPARERVGGSTTA FT PLLKVERARKQFGGVVAVNDVSFEVNAAEIVALIGPNGAGKSTTFNLITGILTTTGGRI FT EVHGKPVDNTPPQEVVKLGIARTFQHVKLVPDMTVLENVAIGAHLRGRSGAITSMLRFD FT RGDEAKLLAEAARQIERVGLGAEIDQLAGSLSLGQQRIVEIARALCADPELLLLDEPAA FT GLRHMEKQRLAALLRQLKDSGMSVLLVEHDMGFVMDLADRIVVLDFGTRIAEGTPDAIK FT TNPDVIKAYLGALA" FT misc_feature complement(order(262667..262732,262796..262861, FT 262922..262978,263069..263134,263216..263272, FT 263294..263350,263363..263413,263435..263491, FT 263507..263572)) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(263599..264639) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1793" FT /product="branched-chain amino acid transport system FT permease protein" FT /function="InterPro IPR001851 COGs COG0559" FT /db_xref="GOA:Q6N8W0" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q6N8W0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27234.1" FT /translation="MNTTILLFLVQDGITNGAIYALLGLALVLVFAVTRVILIPQGEFI FT TFGALTYATLSAGGVPGTAQLALMMGLVAFGFELFSARKSLHVAKVMRAALIYIAFPAI FT VLALATWLPAHKPGVAVNIALSLLIVAAIGLFLYRIAFQPLAHTSVLVLLIASVGCHLA FT LQGFGLVFFGAEGLRGPPLSDVALSVGPLLFTGQSLAVYGITLALMAALWLFFGYTRYG FT KALRATAVNRLGARLVGIRTSLSGQIAFLLASVIGAISGILIVPITTLYYDTGFLIGLK FT GFVAAIIGGLVSYPLTAIAAIVVGIVESFSSFYASNYKEVIVFTLILPVLVLRSLATPA FT VEEEKD" FT misc_feature complement(order(263629..263679,263719..263784, FT 263830..263895,263992..264057,264118..264183, FT 264220..264285,264301..264357,264397..264462, FT 264523..264588)) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 264771..265322 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1794" FT /product="transcriptional regulator, MarR family" FT /function="InterPro IPR000104:IPR000835 COGs COG1846" FT /db_xref="GOA:Q6N8V9" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q6N8V9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27235.1" FT /translation="MTSSNRITSPAMTASKTAAVAKPTRAGRKAPAVETAPEASELKMG FT ELSELLGYALKRAQLRVFEDFLHCVAPVQLTPAQFSVLLLLDANPGRNQTEIATTLGIL FT RPNFVAMLDALEGRGLCVRTRSPSDRRSHILMLTDKGRATLARAKKLVATRHEDRLTEL FT LGRDNRDALLSMLATIAREF" FT sig_peptide 264771..264836 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.767) with cleavage site probability FT 0.568 atresidue 22" FT CDS complement(265460..267286) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1795" FT /product="possible potassium-efflux system protein" FT /function="InterPro IPR003148:IPR006153 COGs COG0475" FT /db_xref="GOA:Q6N8V8" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N8V8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27236.1" FT /translation="MASRSASQASDALSQHGCPFSVRAKAFHGGRCMHELIGDITLSIL FT FAWLLGLAAHFFRQPLILAYLIGGFVIGPFGLGWVKSENSISVISELGLIFMLFMIGLE FT IDLKKIIRAGPVILVAAGGQIAGGVLLGLAFFVGIGLSLGGGHFDALYLTVACALSSTV FT IIVKVLYEKRELDTLPGRITLGILVLQDIFAILFLAVQPSLADLQISVLLLSIARVVAL FT VATALALSRYVLPWLFHRIARTPELVLLGALAWCFLIGEIAERLHLSREMGALVAGVSL FT STFPYALDVTAKVTTLRDFFITLFFVALGMTIPIPNGSVIGLALAIAVFTLASRLLTTF FT LPLYLMKQGLRASLLPALNLAQISEFSLVVIQTGVAAGHIGTQTASAASFAFVLLAVLS FT TFVIMRSDPITRRAIGTLTKFGFRDLGQQQSGAEAAAEAGHGAVHRIVILGFFRAASAL FT VSEIEQHTPELLKQISVIDFNPMVYRTLTERGMHVIYGDISNVDTLLHAGVAKAEIIIL FT SVPDSLLKGATNERLVRHVRALNPNAQIVATADLLADVEAMYQAGADYVTVTRLADARE FT LFEVIEAADNGLLSDKRAALDARLAERREVLP" FT misc_feature complement(order(266081..266146,266288..266386, FT 266588..266653,266684..266740,266777..266842, FT 266873..266938,266978..267031,267047..267103, FT 267125..267178)) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 267942..269516 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1796" FT /product="putative Adenylate/Guanylate cyclase" FT /function="InterPro IPR000345:IPR001054 COGs COG2114" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8V7" FT /db_xref="InterPro:IPR001054" FT /db_xref="UniProtKB/TrEMBL:Q6N8V7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27237.1" FT /translation="MDKSETDDLRARGWWTGLAIAVLLLGLPLAVWLDLTNLADAALRR FT QASDLNSVIKSVRHYYAANVVGRILSHPGQVQVIHDYENVPGAIPIPATLSLELGKVIG FT EQQSNITYRFVSDYPFANRAPHQLDAFERDALAALRKDSSENIVSASAGLFSDSVRLVS FT PVTMAPACVACHNSHPESPKRDWKVGDVRGIQEVMITQPIAANLFSFKFLLAYFVLAAA FT CGVSFLTMQRRQSQKILAMNHELETNNDFLASLSMKISRYIPPQIYKSIFSGQKDVVIH FT TERKKLTIFFSDIQNFTATTERLQPELITQLLNEYFTEMSEIAHRYGGTIDKFIGDAML FT IFFGDPETKGDRADAQACVRMAWAMQRRLSELNAKWRAAGIEQPFRSRIGINSGYCNVG FT NFGSADRMDYTIIGAEANLAARLQSIAEPGGIVVSYETYALVSDIIDAHALPSITMKGI FT SREVVPYAVDHLRDGSEASAVVIEKMPGFDFHLDTAAVAATDSERVRSVLLQALSSLDR FT RQPKAAE" FT misc_feature order(267978..268046,268560..268628) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(269758..271038) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1797" FT /product="conserved hypothetical protein" FT /function="COGs COG2379" FT /db_xref="HSSP:1O0U" FT /db_xref="InterPro:IPR007835" FT /db_xref="UniProtKB/TrEMBL:Q6N8V6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27238.1" FT /translation="MTDRRPLLRAIFDAAVAAAHPDRILAAHLPPAPSGRIICLAAGKG FT AAAMAAAAERHYLDTLNLEPSQLIGIATTRHGHRVPTRVIEVIEAGHPMPDAAGVRGAE FT TSLALAATATQDDLLLVLLSGGGSANWIAPTEGVTLAQKQQATRALLRSGAPIGEVNTV FT RKHLSRIKGGRLARAGEHAGQIVTLAISDVPRDEPSAIASGPTVPDPTTLADACALVAR FT YGLELDPAVLAALNDERNESVKAGDGAFAHARFEIIARPRQSLDAAIEIARGAGYEIAD FT LGADLEGEARDVAAAHAQLAREARAHGRRLAILSGGELTVTVRGQGRGGPNQEYALVLA FT QQLSDLPGIAALAADTDGADGGAGNADDPAGALIDAATFTQIAALQLDPAPYLADNDAT FT GFFAKTGDLLITGPTLTNVNDIRVILV" FT terminator complement(271183..271207) FT /note="TransTerm prediction, 98+%" FT CDS complement(271237..272472) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1798" FT /product="putative periplasmic binding protein for ABC FT transporter for branched chain amino acids" FT /function="COGs COG0683" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q6N8V5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27239.1" FT /translation="MSSLSRSIAAVAAVALLSATGGQALAQKKYGPGASDTEVKIGNIV FT PYSGPASAYGSVGRAQEAYFKMINDKGGINGRKIVYVSYDDAYSPPKAVEQTRKLVESD FT EVLFMFSPLGTPSNTAIQKYLNAKKVPHLFLASGATKWNDPKHFPWTMGWLPSYQSEGR FT IYAKYILKEKPEAKIAVLYQGDDFGKDYLKGLKDGLGAKVSQVVIEDSYELTEPTVDSH FT IVKIKAANPDVLVIFATPKFAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQ FT GIVSAAYAKDATDKQWENDPGMKAYYEFMAKYAPDASRADSSFTTGYNIAETVAVLIKQ FT CGDDLSRENVMKQAANLKGVQLGGLLPGVTLNTSPTDFAPIEQLQMMRFEGENWKLFGD FT VIEGEVAAPSGG" FT sig_peptide complement(272392..272472) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.941 atresidue 27" FT CDS complement(272715..274202) FT /codon_start=1 FT /transl_table=11 FT /gene="ung" FT /locus_tag="RPA1799" FT /product="Uracil-DNA glycosylase:Phage SPO1 DNA FT polymerase-related protein" FT /function="InterPro IPR005122:IPR005273 COGs COG1573" FT /db_xref="InterPro:IPR005273" FT /db_xref="UniProtKB/TrEMBL:Q6N8V4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27240.1" FT /translation="MNRIRLDSDTDFDGWRKAARELVLADVAPADVTWTVAGDEPELFD FT VAGLAPHAGTFAEMAAPFIHPAQSPSPAQTFNVPARFVELAHIAILHRDPQRFAYLYQL FT LWRLRANPELMQVATDPDVARLQAMAKAVRRDEHKMHAFVRFREIGREPKSRYVAWFEP FT EHHIVELAAPFFARRFADMEWSILTPDACAHWDGHAIAITPGVSKAMAPSEDRLEETWL FT TYYASIFNPARLKTRAMQAEMPKKYWRNLPEAALIKPLIEHAERKAHAMVAAEATAPRK FT PQRQEPPMTRAEPKADTLAHLREEAKDCRACDLWKDATQTVFGEGPQHATVMLVGEQPG FT DKEDLAGQPFVGPAGQMLDRALAEAGVDRSKTYVTNAVKHFKFVPRGKIRLHQKPATPE FT IKACRQWYERELAAVQPLLVVAMGATAAQSVLGRITPINKTRGHLIDRDDGPQVLVTVH FT PSYLLRLPDADAKAREYARFVEDLKLIAAHLKKAHAA" FT CDS complement(274299..275549) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1800" FT /product="Elongator protein 3/MiaB/NifB" FT /function="InterPro IPR006638" FT /db_xref="GOA:Q6N8V3" FT /db_xref="InterPro:IPR003583" FT /db_xref="UniProtKB/TrEMBL:Q6N8V3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27241.1" FT /translation="MDVQRKLAILADAAKYDASCASSGTEKRDSQGGKGLGSTAPGMGI FT CHSYAPDGRCISLLKVLLTNACAYDCLYCVNRASSNVPRARFTIDEVVQLTLDFYRRNY FT IEGLFLSSGIIRSADYTMEQIVEVARRLREEHHFRGYIHLKTIPEADDALIAKAGRYAD FT RLSINIEMPEETSLAQLAPEKDVRAIRRTMGRLRLRLDEATEAKAEARKQPSRAKPPRF FT APAGQSTQMIVGADSATDQTILDTSANLYGSYNLKRVYYSAFSPIPDSSRALPLQAPPL FT VREHRLYQADWLMRFYGFDAGEIIDPAAGMLSLEMDPKLAWALRHRERFPLDVNRASRE FT ELLRIPGFGRKAVNRIIDTRRYSAIRAADLAKLHIPRNKALPFIVLPDHRPPTHLLDGA FT RLAERFQPKAQQLGFGF" FT CDS 275719..276504 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1801" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR017026" FT /db_xref="UniProtKB/TrEMBL:Q6N8V2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27242.1" FT /translation="MDSARHGMLARLQGEIDRLESGTAETLRRVPLGHDDVDAVLHGGL FT MQGALHEVFCDGRHAAAATGFIAGVAQLLAEARYLLWIRQDFSARENGELAMEGLAELG FT FDPRRLVMVRAHDADGALRAAADALACNGLGAVITELWGETRAFDSVASRKLTLAAQQS FT GVTALMLRIAAAPQASTAETRWVIRGAPSPPIEDWGAPVLETFLVRNRRGQTGRWIMEW FT NCDACRFREPQTHPRSLAAEAFDRSSRAGLAAGEHRLAG" FT CDS 276557..277993 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1802" FT /product="conserved hypothetical protein" FT /function="COGs COG0389" FT /db_xref="GOA:Q6N8V1" FT /db_xref="InterPro:IPR001126" FT /db_xref="UniProtKB/TrEMBL:Q6N8V1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27243.1" FT /translation="MVIACDARASRGGVIPGMPLATARAMHPALDVIDHDPHADAALLN FT AIADWCDRFTPLVAFDGSDGLLLDITGCAHLFGDEAKLLNMLTAALTRQGFAVSAAIAG FT TAVAARALTRGGSGLIVAPGEEMRAVAPLPVAALGVDEAIVRGLRRAGFKTVGEVLARQ FT PTELAARFGEGFVAVLRQATGEDDAPISPRRPAPDYVVDKNFAEPVATTEVILPTLLAL FT ARLLIAAMERNGKGARQLTASFFRSDGAVRSISVETGQPVTRVEVVQRLFAEKLDALND FT PLDPGFGFDLIRLAASVSVAVTEAQRGFDTTAHQAEDVALLADTLAARLGARRVVRYLP FT QDTHIPERAALAVPVQHCPPDVGDAPWPARADEPPLRPLRLLQQPEPIEVIAGAPDDPP FT AQFTWRRVHHRVARAEGPERIAMEWWCAAEPGLTRDYFRIEDEAGARFWVYRDGLYNVE FT VTPEPDGNGQPRWYMHGLFA" FT CDS 278147..281734 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaE2" FT /locus_tag="RPA1803" FT /product="putative DNA polymerase III alpha chain" FT /function="InterPro IPR001993:IPR003141:IPR004365:IPR004805 FT COGs COG0587" FT /db_xref="GOA:Q6N8V0" FT /db_xref="InterPro:IPR004805" FT /db_xref="UniProtKB/Swiss-Prot:Q6N8V0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27244.1" FT /translation="MSARYAEIGVTTNFSFLEGGSHPQDYVHEASRLGLDAIGIADRNT FT LAGVVRAFSEFDNEELIHKPKLLIGTRLCFADGTPDLLAYPTDRAAYGRLCRLLSAGKL FT RAGKGECHLTFADLEAFIHERSPSIHELATVIHPPSASINQPSASIHQFPTPSWPGLTR FT PSTPTSKVVLVSVDARVKPGHDGGKRVADNSQILLVVMPSYRFQTKTIAIALERLTALN FT ADAVWLGLTPYYRGDDKRRLARLRRIAAVARVPCIATNDVLYHHPRRRALQDVLTCVRE FT KTSIDKAGRRLEGNAERHLKPAAEMARLFRHDPEAIAETLRFADRISFTLDELKYHYPD FT EPVPPGKTAQAHLQDLTEQGIKQYFPNGISDRLRATIAKELAIIERRGYAHYFLTVHDI FT VRYARSQDILCQGRGSAANSAVCYVLGITCVDPTEIDLLFERFVSEERDEPPDIDVDFE FT HSRREEVMQYIYRRYGRHRAAIVATVIHYRPRSAIRDVGKALGLSEDVTAALADTVWGS FT WGKGLNEMQVRQAGLDPHNPMIGRAVELATELIGFPRHLSQHVGGYVLTQDRLDSYVPI FT GNAAMADRTFIEWDKDDIDAVKMMKVDVLALGMLTCIRKGFHLIAQHKGVRFQLSDIKS FT EDDNAVYKMLQRGESIGVFQVESRAQMNMLPRLKPRCFYDLVIEVAIVRPGPIQGDMVH FT PYLRRRNGQEPVVYPSPSGEAGDKNELRQILGKTLGVPLFQEQAMRIAIEAAHFTPDEA FT NQLRRAMATFRNVGTIGKFEAKMIGNLVKRGYDATFAKNCFEQIKGFGSYGFPESHAAS FT FAKLVYVSAWMKCEHPDAFCCALLNSQPMGFYAPAQIVGDARSNGVEVRPVDVSFSEGQ FT CTLEERCGRHHAVRLGFRMIDGFRWADPDEERVQLEAGEPPSDDWAARIVAARARGAFT FT SLEQFARITALPKRALILLADADAFRSLGLDRRAALWAVRRLPDDVPLPLFEAASAREQ FT EDERAAPLPAMPMAEHVVADYQTVRLSLKGHPMEFLRALFAAERVVTCREVSRSEQRAS FT GCWLRCAGVVLVRQRPGSANGVIFMTIEDETGIANIVVWPAVMEKYRKEVMGARLVLVE FT GKVQASAEGVVHLVAERLIDRSAEMGRLAEGLVRPALPDGADLYEPLTSEKYNYEALNG FT DRRDTPDAPAQRHRHPRDVRILPPSRDFH" FT CDS complement(281740..282693) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1804" FT /product="conserved hypothetical protein" FT /function="COGs COG0451" FT /db_xref="GOA:Q6N8U9" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N8U9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27245.1" FT /translation="MTPETVILGYGPVGRATTELLAAKGVAVRVAQRSQPADLAHGAVF FT QACDVLDPASVAGAVAGAKQIVVAIGFPYIAEVWRTSWPAAMQNLLAAAAATHARMVFV FT DNLYMYGAQHAALREHMPLTDVGVKPAVRAEITRLWTKASAAGQVRVAALRAPDFYGPG FT VGLSHLGDLAFGAIAKGKRAMLIAPPDTPHDFAYVPDIARAVASLLDAPDDAFGQAWHM FT PSAPIRTPRQILELGARALGTTARISSLPQWVLPVVGAVSPVLREMTEMRFLWDRPYHV FT DARKFTSRFWSDVTPFEIGAAATALSFRDQTSTLAA" FT CDS 282770..283720 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1805" FT /product="transcriptional regulator, LysR family" FT /function="InterPro IPR000847:IPR005119 COGs COG0583" FT /db_xref="GOA:Q6N8U8" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q6N8U8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27246.1" FT /translation="MRDVNLAGLDLNLLPPLEALLRRRNVTHAAQDVGLSQPAMSRALS FT RLRILLADPLLVRGHHGLVLTPKAQALVPLLSVAVADLKDLFRERRFDPATEQRTIRIA FT ASDNQTVLLAPPLMARLAHEAPGIDLRFEPYRADLRERMESGALDFAFALATTDLPPGA FT VSMPIADDRIALVMRRGHPKANRIWRISDYADVDHVGIALLDDGRSELDGILAAARVSR FT RVALVTPHFTAALATVAATDMVTTISRALARRFAGAFDLIVKQPPFDKVELPMTLVWSH FT LRNADPLLIWFRGLLREVAGPAYAERHQRAARRPT" FT CDS 283767..285164 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1806" FT /product="L-carnitine dehydratase/bile acid-inducible FT protein F" FT /function="InterPro IPR003673 COGs COG1804" FT /db_xref="GOA:Q6N8U7" FT /db_xref="InterPro:IPR003673" FT /db_xref="UniProtKB/TrEMBL:Q6N8U7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27247.1" FT /translation="MQSLRDLLADLWTSVGADAAALDRVTLTGDEPQLPSSFRVDAAAQ FT VAIAASGLAAAEIWAMRSGQAQDVSVDIRHAAIECRSERYLRSNDEPPPPAWDPLAGVY FT QVKGGRYVRLHTNFPHHRDAVCRVLGCEPVRDAVQAALLQWEGEAFETAAYAAGGVVAL FT MRSREEWQALPQAAALDALPLVEITKIGEGAPKPWPEGSRSLVGLRVLDLSRVIAGPVA FT GRTLAAHGADVMLVSSPRLPSIPWLVIDTGRGKLSSFADLTTPEGHAALRELLTEADIF FT SQGYRPRSLAALGFSPEEAATINPGIVYVSLSAYGRSGPWAERRGFDSLVQCATGFNHA FT EGQAAGVAGPKELPMQILDHATGYLMAFGAMIAKARQAREGGSWHVQVSLARTGKWLWE FT MGRLPHGLATPEIGQEAAAPYLERAESGFGTLQAVRHSAVLSATPASWARPAVPLGTDP FT AAWPARG" FT CDS 285384..286622 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1807" FT /product="possible heavy metal efflux pump, HlyD family FT secretion protein" FT /function="InterPro IPR006143 COGs COG0845" FT /db_xref="GOA:Q6N8U6" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q6N8U6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27248.1" FT /translation="MREHFLRNLRLRRTWWIAAACVAAGVAVGGYELAKFEQPGRGHTD FT ISSQSRRSADRYTPTPAEWASLTIEPVSDRSFRAEHVTEGKIAIDEDRATPVFSPYAGR FT VTKLLARPGDHVTKGQPLFSIEAPDTVQAQNDFITASTALNKAKSQLDLAQLQDKRARD FT LFEGKAVPLKDYQQAQATLITAQNDFQSATTALEAARNRLRILGLSESAISAFQNKGNI FT NPETTIVAPIAGTVVQRKVGPGQYVNAGSSDPVYMIGDLSTVWLTAFVRESEAADVAEG FT QDISFKVLALPGRTLTGRIDYVSAAIDPTTRRLTVRATIDNPGGLLKPEMFANVTIYSP FT SDHPAVGVPRQALIYEGDQVRVWVAHDDRSIELRTVKPGLSAGDLVEVTGNLRPGEKVI FT TRGSLFIDRAATG" FT sig_peptide 285384..285488 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.988) with cleavage site probability FT 0.551 atresidue 35" FT misc_feature 285420..285476 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 286779..289901 FT /codon_start=1 FT /transl_table=11 FT /gene="czcA1" FT /locus_tag="RPA1808" FT /product="putative RND divalent metal cation efflux FT transporter CzcA" FT /function="InterPro IPR001036:IPR004763 COGs COG3696" FT /db_xref="GOA:Q6N8U5" FT /db_xref="InterPro:IPR004763" FT /db_xref="UniProtKB/TrEMBL:Q6N8U5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27249.1" FT /translation="MGRLVELAVNRRFLMLALFLLVLAGGVAAFEHLNIEAYPDPTPPM FT VDIVTQSPGLSAEEIERYITIPIETQVAGIKNLKTIRTISLYGLSDVKLQFSFDYTYQQ FT ALQQVLNRLSQLPPLPGNVQPGISPLSPIGEIFRYRLVGPPGYSVLDLKTLQDWVLQRR FT FRAIPGVIDVTGWGGKTKTYEVQVDFNKLIAYGLTLPQVLQAVSNSNINVGGNTVDIGA FT QSAVVRGVGLIRSLDDLANTMVVSNNGNPVLVKDVAKVSVAEKPRLGIAGINNDDDIVQ FT GIVLMRRGEQSSPTIARVEQAVTKINASGVLPPGVRIERIYDRKDLIDTTTHTVLHNMV FT VGILLIVLLQWIFLGDLRSALIVGATIPFALFFAVIILVLRGESANLLSVGAIDFGLIV FT DATVIMVEAIFRRLSHTTVLSPEERSQISADTIMGMKKHAIRSAAADVSRSIFFAAAII FT IAAFLPLFTLSGVEGNIFGPMARTYAYALAGGLLATFTVTPALSAIILPHHVQETETWL FT MRMLHKVYTPWLGWAVKNRPVVMAGAAGLVLTTVIATRFLGLEFLPKLEEGNLWIRATL FT PPTISLTEGNGYVNDMRKLIAGFPEVESVVSQHGRPDDGTDAAGFFNAEFFAPLKPASQ FT WPGSHDKDELTARMLKQLQAKFPGVEFNFSQYLQDNVSEAVSGVKGENSIKLYGNDLQA FT LTDTANKIKAVLSTVQGVQDLAVFTSLGQPTIQIDVNRARAARYGLTPGDINATIKVAI FT GGDSAGDLYEPGSDRHFPIIVRLAPEYRKSAEAIHNLRIGVQGPNGITQIPLSELADIQ FT LVSGAAYIYREDQERYLPIKFSVRERDLGSAIREAQEKVNAQVQLPPGSRMEWVGEFGN FT LQDAIKRLSIVVPISLALIGALLFFNFGSLTDTLLAMSVIPMAIFGGVMGLLVSGIPFS FT VSAAIGFIALFGIAVMDGIIILSQYNQLIDQGLDRLRAVVRTGELQLRPVLMTCVIAGV FT GLLPAAMSTGIGSQVQKPLAIVVVTGMMLAPGVILITLPVLISYFSRRRAN" FT sig_peptide 286779..286868 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.969) with cleavage site probability FT 0.628 atresidue 30" FT misc_feature order(286815..286883,287775..287843,287856..287924, FT 287937..288005,288117..288185,288228..288296, FT 288387..288455,289413..289472,289491..289559, FT 289569..289637,289698..289766,289809..289877) FT /note="12 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 290101..290418 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1809" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8U4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27250.1" FT /translation="MAKLLVYRCPQNGLMTQTWLADEVVGGDRPTYEPVFCLACSQQHF FT ISLDTGRALGDTSATVTATHGPAFPPREERFAQRAALQQEPTGFGSPDMDPFHGNQFKA FT Y" FT CDS complement(290513..291955) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1810" FT /product="putative outer membrane protein" FT /function="InterPro IPR003423 COGs COG1538" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8U3" FT /db_xref="InterPro:IPR010130" FT /db_xref="UniProtKB/TrEMBL:Q6N8U3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27251.1" FT /translation="MSRRARDRMVWWTRLVGSVYRAHRSALTLGVATAIGVAAAGPVSA FT EGLSDALVKAYQSNPQLTAERARQRATDENVPQALAGYRPQLLATLGAGLQQVRNLLPT FT NTYQGDTLRPWTIGVTVTQTLFNGFRTANSVRVAELQVKSGREALRNVGQGVLLDAVTA FT YTNVLANQALVAAQKANVDFLSQTLDITKKRLNAGDVTPTDTAQAEARLNRGRADLNAA FT EVNLAISQATYAAVIGSPPGTLNNATPVDRLLPKSREDAIAQAAKGNPAVLAAGYDVDV FT ATTTIKVAEGALLPTVTLQGSASRASQTDSTLGTYGTDQASVIGQINAPIYDGGTAASQ FT TRQSKELAAQSRSVLDLVRNQTRTATIGAWVSNEGAKIAVSAAESEVRAAEIALQGVSR FT EAQGGQRTTVDVLNSQQDLIQAKARLIGAQRDRVVASYTLLSAIGRLDVQSLGLNTPDY FT LPDVHYHQVRDAWHGLRTPSGQ" FT sig_peptide complement(291818..291955) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.845 atresidue 46" FT CDS complement(292130..292909) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1811" FT /product="enoyl CoA hydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8U2" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6N8U2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27252.1" FT /translation="MSTFEFIIVERQNAVGIIKLNRPKMLNALSFGVFREIGAAVEDLE FT ADDAIGCILITGSEKAFAAGADIKEMQPKGFIDMFNEDFTSIGGDRLARCRKPTVAAVA FT GYALGGGCELAMMCDIIIAADTAKFGQPEITLGTIPGIGGTQRLTRAIGKYKAMDLCLT FT GRMMDAQEAERSGLVSRIVPADKLMEEALGAAEKIATMSRPTAAMAKSAVNRALETTLA FT EGLAVERDLFRSTFALEDRAEGMAAFIEKRKPNNQNR" FT CDS complement(292993..293730) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1812" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8U1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27253.1" FT /translation="MDIKASGRSALIIAAGLTVGLWCVAPATPSFAAPQAAASDSGSAA FT KPAPKKKAVKHHAKPAKAKQAQAKPSDTKPSDANPSEAKQSEAKSVVKSPVEEGRTADA FT QTEPKPLADASGALPASIANANAQATPAETAQAQPTPSADASRAAAPTPAAGATKPAVI FT AADQVNDLDRAATDAPQLQAQMQPQQPAAAETAATPQPQAETQAKATAHDDDAWDKASL FT IGKIFIAAGGLLTLASAARMFMA" FT misc_feature complement(order(292999..293064,293635..293700)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(293632..293730) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.942 atresidue 33" FT CDS 293922..294530 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1813" FT /product="RNA polymerase ECF-type sigma factor" FT /function="COGs COG1595" FT /db_xref="GOA:Q6N8U0" FT /db_xref="InterPro:IPR013249" FT /db_xref="UniProtKB/TrEMBL:Q6N8U0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27254.1" FT /translation="MIAPVERNEPRSGPNCWTGACVRGRDDEWTDLMRSANAGDSIAYR FT RLLESVTPVLRAGARRGLARAGQPVDQAEDIVQDILLAVHLKRQTWDPGAPFAPWLFAI FT ARNKLIDTLRRRGRRVFVDIDDFADTLASEPAPETLPASEVTRHLEGLPPRQRDVLQSI FT AVDSASIKDTAAKLSMSEGAVRVALHRGLSALAAKLRTV" FT CDS 294527..295171 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1814" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009495" FT /db_xref="UniProtKB/TrEMBL:Q6N8T9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27255.1" FT /translation="MTMETDRLIQALAADGARRDRPVGQVLAAALLVALPVSAALLLTT FT LGLRPDLHQAMRNPFFDLKFVVTLSLSLSAIIVALHLSRPEATAKGWRLLLLAPLAILG FT LAIGVEAMLPHRTSAMTRLLGHNSLLCLGSIPALSLPILGAALLGLRRGAPSRPALAGA FT LAGMLSAGLAGTLYAAHCVDDSPLFVATWYTLATAMVAGLGALLGRRVLRY" FT misc_feature order(294602..294670,294713..294772,294806..294865, FT 294908..294976,294995..295063,295091..295150) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 295252..295632 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1815" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8T8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27256.1" FT /translation="MGGFSRRRARALVAAWVAAYALVLNVILASTLLAGQSPVQLVTGH FT EFCLAAADDGAPGDAGQPAKAVPIRCPLCLGQHVSATPPPLSPALAIRIAFSIRYEVPP FT ATPFVALRPSPAHQPRGPPALT" FT sig_peptide 295252..295356 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.990) with cleavage site probability FT 0.854 atresidue 35" FT misc_feature 295285..295353 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 295693..297921 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1816" FT /product="putative outer membrane receptor for iron FT transport" FT /function="InterPro IPR000531:IPR005829 COGs COG1629" FT /db_xref="GOA:Q6N8T7" FT /db_xref="InterPro:IPR005829" FT /db_xref="UniProtKB/TrEMBL:Q6N8T7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27257.1" FT /translation="MSSAFPRSRRHLLVHATALVSTCLVVLPAAAQSRSSDSPLPPVTV FT QAPDQAARPAPVRPKPRAASQSTRAVRSAAPAAQPSAAPAASEVARGPALTVLTVQQAL FT RDIEQTPGGVALVPANAYRNSTVSNTIKDILDYVPGVFAQPKWGDDTRLSIRGSGLSRN FT FHLRGVQLYMDGIPINTADGYGDFQEIDPTAYNYVSVYKGANALQFGANSLGGAINFVT FT KTGRDPFPNGVSVDAGAFGYRRLQANAGGVNGAWDGYVTASAQAADGFRNHSDGQAYRL FT SGNVGYQITPDIETRFYLNANSVRQKIPGSVTKDVALNSPQTAAANNIALDQQRNIDTV FT RLANKTTIRFEDTVVDFGAFGVDRHLMHPIFQWLDYRYQDYGGFAKVTDDRIIGGYRNR FT LVAGVNLLNGRIDNKQYVNVAGNKGALASSSLDKSTNTSVYIEDSFYFLQNVALVGGTQ FT FLHATRDRRDRFLSDGDQSGSTEFNLWSPKGGLLWQIDPNWQAFANISRSAEVPSFGES FT ASGPGIPFIPFTSIRPQRATTYEIGTRGRRPDVTWDLSLYRAEIKDELLCLYSAFGNCN FT VTNADRTMHQGVEAGLGVTLFKHLFERAGAPDRLWLNMAYTLNDFRFDGDAKFGNNLLP FT GAPRHYLRAELLYKNPNGFYMGPNVEWVPQAYYVDSANTLQTEPYALLGLKAGIDNGGP FT YSIYIEGRNLLDKSYIASASIIDKANANSPLFEPGTGRAVYAGFKARW" FT sig_peptide 295693..295788 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.772 atresidue 32" FT misc_feature 295726..295785 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(297944..299053) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1817" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR019285" FT /db_xref="UniProtKB/TrEMBL:Q6N8T6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27258.1" FT /translation="MTSRPKRPALHLLDELQAMLAHGTVARRVETLRRVTDLFLDGVDY FT NDEQIEVFDDVFTCLVEDIESNAMVLLAQRLANVQAPPRIIRQLAFEDRIEIAAPVLSQ FT SEQLDDATLIANVRAKSQQHMMAISTRRTLSGAVTDVLVELGNPAVVQSTVKNPGAEFS FT DNGYCVLARRAEHDDGLADALGLRTIPRAQYLKMIAIASATVRSKLQAANPHAAADVGN FT AVRQAGRLARSAPRGISRQTSIAHGLVRSLFEEGRIDASAVHSFAQQRKFDETNQAIAC FT LANITVETAEAMMVESRDEGVLILAKVCNLAWATVREIIDMRDEINGTHSHDLEECRDT FT YERLRTSTAQQVLRFHRMQQSTVAAPPAA" FT CDS complement(299091..300380) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1818" FT /product="putative diguanylate cyclase (GGDEF)" FT /function="InterPro IPR000160 COGs COG3706" FT /db_xref="InterPro:IPR000160" FT /db_xref="UniProtKB/TrEMBL:Q6N8T5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27259.1" FT /translation="MAVREIPRECRWNQSTSGLYQPLRANGRYQNERLFLVGSPRAKST FT GRTMGPTAALSGTLPDPQTRAEDARTLAVRGRRMRQRRHMLDLIAASFMIDAAILLIYV FT QAGTIPSMVVVAFAVSGALVGGILFALSESGFNDRFSDHYLTVPIAITTLALIIAFTVW FT APQIGAFFLFELFVVFGFASLRADRRQALILWSALLCALVPLFLLTDLPIGMPHDNSLE FT RLATLLALVLTVGRCTFIGVFSKALRDSLYKRGVQLREAYQRIEELAELDELTGAYNRR FT CIMRHLDNEIERAARHCESLSLALIDLDWFKRINDTFGHPIGDEVLRTFAITIFANIRS FT FDRFGRYGGEEFLLLLPNTSDDEARLILDRLRMIVADLDWSAFSPSMMVTLSAGVTTMT FT LQESTEAVLARADRALYEAKHGGRNRISCA" FT misc_feature complement(order(299652..299708,299754..299807, FT 299829..299879,299892..299948,299988..300053, FT 300069..300125)) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 300625..301194 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1819" FT /product="RNA polymerase ECF-type sigma factor, possible FT FecI" FT /function="COGs COG1595" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8T4" FT /db_xref="InterPro:IPR013249" FT /db_xref="UniProtKB/TrEMBL:Q6N8T4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27260.1" FT /translation="MSTKQAATDDVLIARIAQGDRVAMQVLYGRHHVKVFRFGLRLVRN FT EQIAEDLISEVFLDVWRQAGKFEGRSSVSTWLLAITRFKALSALRRRKDAELDDEAAAA FT IEDPSDDPEIAVQKKDTGEALRKCLSSLTPEHREIVDLVYYHEKSIEEVAEIVGIPENT FT VKTRLFYARKKLADLLQAAGVQRGWP" FT CDS 301191..302024 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1820" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8T3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27261.1" FT /translation="MMAMSNTMPDPREPGDVEALLPWYAAGTLNARDARRVADALDRDP FT ALARQYAVILEEYASTIELNESLGAPSSRAMQKLFAAIDAEPARAPGAGQGLGARFAGF FT FAGLSPKALAWSASVAGLALLLQAGLIGALLTWPHAAPVQTAAYQPQREVARAPASSPA FT PATVSPPAAAMADRAADAGKSTPPMVMAERSGGPVVRSLAPQSGPRVLVKFAPEARASE FT IAALLDQYNAVVVDSSRGGLFRLQFGTQSLSKQDQETLIGRLQKEPVVSVVLSAP" FT terminator 302279..302308 FT /note="TransTerm prediction, 98+%" FT CDS 302511..303020 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1821" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8T2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27262.1" FT /translation="MEQTDAERGRALVQRWCLLAEQRLDYLTELFETGRWRRFFGELEF FT LENVQEAKAAVESWRGLLQREATLDNRPVDLSWLGHNKKVPPRLAFYFDGEVVNGSPSY FT ALPHSAPRPAQSPRVATPATPAEPERAPIAPEPAPAIVPDDVPVWMHALDPARLEQRYS FT LLRKAS" FT CDS 303459..305525 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1822" FT /product="methyl-accepting chemotaxis receptor/sensory FT transducer" FT /function="InterPro IPR000727:IPR003660:IPR004089 COGs FT COG0840" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8T1" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q6N8T1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27263.1" FT /translation="MPSAQSSPVPHSSAGLFSFFTNRKIGVKIAIGFAAVQVLMAVLAV FT LNYSSFGKVGDAFAKFDQRVGVVDAVRDVEQDFNSFRRTVREYSLTGEDFLIAEATKRR FT TELQDHIKQSLQQIHGSSRHAAMADLSNKVDSYVGQFDSLTKLRQDQNRLSLTVLGPVG FT QRIVSKLEQLQSSTMSGDGNSDQALLVAQSLKQFLLLRLGAAKVLGIRLEKAAQASAEK FT ALADFRTSLSTMKTALTGDAERKQLAAIEADLAIYADGFQQSVRDVNDIDATIGSMTKV FT AESLAGDAAAIKQSGVAESKQIGHQTEALIGETQNQIVFITLGAMAIGLVLAWLIGRAV FT SRPIVAMSGVMKELAAGNTNVEIVGSGRLDEIGLMACTVEVFRNHSIEFDRLKAEQEEA FT ERRVAAEHKAEMQRLADHFEGAVGEIIDTVTSASTELEASAGTLTTTAEHSQMLAGSVA FT AASEQASANVQSVASATEEMASSITEISRQVQEAARIANEAVEQARKTNDRIGTLAQAA FT NRIGDVVDLINTIAGQTNLLALNATIEAARAGDAGRGFAVVAQEVKALAEQTGKATGEI FT SSQIGSMQSATQESVGAIREIGGTIERMSEIASTIASAVEEQGAATQEISRNVQQAARG FT THEVSSNIADVQRGATETGSASSQVLSAAQSLSRDSTRLKDEVDRFMETVRAA" FT misc_feature order(303543..303611,304410..304469) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 306007..308640 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1823" FT /product="TonB dependent receptor" FT /function="InterPro IPR000531:IPR001680 COGs COG1629" FT /db_xref="GOA:Q6N8T0" FT /db_xref="InterPro:IPR019775" FT /db_xref="UniProtKB/TrEMBL:Q6N8T0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27264.1" FT /translation="MHRLRPGLQPAAAIAGRHRGPEPDLGLARSALAADRGCSKQRPGF FT LTFCSRASGPCVTALLADRALAARRCALPFRCCPRRVCSSQRTAPDVLRQPDAVRARSS FT VSFVMSSVLSAGLRRSLLLSTSLLSLPLAAVAFSAASLSSAPASAQTASNLSTIVVEPT FT RPRAKPRVRATTSSPQRGPVIRDAAVSPPPSAPSSAPISASATTLPGSAAVARSLGTSD FT SASLITDIPGGAVWGAGGVSSLPALNGVGADRVQVAINSMLISPACPNEMNPPLSFVNP FT QMIASMRAYLGVAPVSVGGDYIGGKIDVTTAPPQFATGPSLLTTTTVSGFYRSNGNAYG FT VDARATIANQDTSVTYTGGWARSGNYKAGNGMTVKSTLWEVQNHAVSISRQSAGNLFTL FT QVGGQFIPYQGYVNQYMDMVENRSMFVNGRYDGVFDWGKLETSAFYHRIRHTMGFIAPD FT KVSNMPMDTRGTDLGYNIKASVIASDHDLIRIGNETHAYRLDDWWDPVPGSGMMMSPNT FT FININDGRRTRLGTFVEWERHWNREWTTLFGLRNDVVWMGTGNVQGYSSMYAADAARFN FT GRDRDRTDVNFDGSALIRYEPNAISQFELGFARKTRSPNLYERYTWSNTAMAMKMIGWF FT GDGNGYVGNVDLNPEKAHTVSFTAAWHDPAQKLWEVRVTPYYSYVQDYIDVNRCFVAGS FT STCNAANLTKTNAFVFLQFANHDAELYGVNLDGRLTAWDNSAYGRGVLRGQFAYVHGQR FT TDGINLYHVMPVNAKLGLDHELGGWVNGIELQLVGAKTQVSQVHNETKTSAYALLNLRT FT GYRWENVRLDVGVDNVFDKFYYLPLGGADLVDFRAASMMGGSSPIWGYGVPGIGRSFNT FT RLTVSF" FT CDS 308736..309251 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1824" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N8S9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27265.1" FT /translation="MDVGVIVFSSGWSRDSNSKQGNFIMLDRRNLLTVLGAAIFVASPA FT LAAEDHSAHMHAAAAGAAPANAKLIETASDCVKTGQACIAHCLQSFAAGDTSLAACAKS FT VDQMLSVCATLQKLASLGSPNLPAMAKVALAVCEDCEKECRKHADHHATCKACADACKS FT CADACRSV" FT sig_peptide 308736..308879 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.972) with cleavage site probability FT 0.964 atresidue 48" FT CDS complement(309343..309582) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1825" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009875" FT /db_xref="UniProtKB/TrEMBL:Q6N8S8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27266.1" FT /translation="MDEQRKTPRRRVLKAATIEFGGGAIDCSVRNISEAGAALDVVTPL FT FIPDRFTLYVPSDQIKRASRVIWRKEKRIGVSFD" FT CDS complement(309715..311073) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1826" FT /product="conserved hypothetical protein" FT /function="InterPro IPR006311:IPR006626" FT /db_xref="InterPro:IPR006626" FT /db_xref="UniProtKB/TrEMBL:Q6N8S7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27267.1" FT /translation="MALHRRDFLTALATGSALTLTASPLTAAPTSRRGRDAALSGVRPD FT SSDDQTSALQRAIDDAAERHVPLALPPGNYRTGTLRLPSGTQLSGVRGATRLIFTGGPS FT LFDSQGAETATLSGLVLDGAGIPLPSRRGLVHCIAAQDLRIENCMITASGGSGIWLEAS FT SGAISNNMLTKIAVTGVVSFDAKGLRVDGNTIIDTNDNGIEILRTSIGDDGTLVTGNRI FT ENIKAGPGGSGQYGNAINAFRAGNVVISGNRIKDCDYSAVRGNSASNIQITGNSVLNVR FT EVALYSEFAFEGAVINNNTVDGAALGVSVCNFNEGGRLSTVQGNIIRNLKPKRPIGTAP FT DDDAGIGIYVEADTAVSGNVIENAPSFGIVAGWGRYLRDVAITGNVVRKSFIGIGVSVV FT DGAGTATISGNVIAETPRGAVVGLDHARPVTPDLTTPGSTRFNQVSLGHNTTR" FT sig_peptide complement(310990..311073) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.996 atresidue 28" FT CDS complement(311179..311439) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1827" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8S6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27268.1" FT /translation="MPYALFCDDARVSKIYPTQADVWKHARESGLVIDTDTPRHVLDNG FT YEIRASAPEPGEDPERNEREARAASHDQFVPPQREPERTPG" FT CDS complement(311506..312156) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1828" FT /product="Pyrrolidone-carboxylate/pyroglutamyl peptidase I FT (C15)" FT /function="InterPro IPR000816 COGs COG2039" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8S5" FT /db_xref="InterPro:IPR016125" FT /db_xref="UniProtKB/TrEMBL:Q6N8S5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27269.1" FT /translation="MSGLRILITGFGPFPGAPYNPTPQLVDRLVKLRRPAFDDVVRVGH FT IFNVSYRAVDRDLPALLAQHRPDALLMFGLAASTRHVRIETRARNAITTLWPDAEKVTL FT RHGQIAPGEDARTFGAHGARLARAARLTGIDARLSRDAGRYLCNYLCWRGIEATQVQSG FT PRLAAFVHVPLISRDGTAWPGSRITTEQLVDAGEAMLLELVRLTRQTRRVAAA" FT CDS complement(312153..313142) FT /codon_start=1 FT /transl_table=11 FT /gene="argK" FT /locus_tag="RPA1829" FT /product="LAO/AO transport system kinase" FT /function="InterPro IPR001687:IPR005129 COGs COG1703" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8S4" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6N8S4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27270.1" FT /translation="MNSARRTGDIAHFASEVRSGHRAALARAITLIESRRADHQASARA FT LVQDLLPETGRAIRVGITGSPGVGKSTTIDALGMYLIEQGHKVAVLAVDPSSARTGGSI FT LGDKTRMARLSAEPDAFIRPSPSSGTLGGVAAKTREAMLLCEAAGFDVVLVETVGIGQS FT ETAVCDMTDFFLALMLPGAGDELQGIKKGLVELADMIAINKADGDNIKRANLAAGEYRA FT ALHILTPRSPNWQPPVKTYSAMTGTGIAELWQAILDHRAATTPSGEFDARRREQQVKWM FT WTLLEDRWKAKLRSDPAIRAKVKSTEAAVAEGSITPTLGADRVAELIG" FT CDS complement(313229..313558) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1830" FT /product="hypothetical protein" FT /db_xref="GOA:Q6N8S3" FT /db_xref="InterPro:IPR019567" FT /db_xref="UniProtKB/TrEMBL:Q6N8S3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27271.1" FT /translation="MFVIHHSDCGMQLFTGEVIADLLEDNLETASFDGQHWSNPKHGGG FT SVAGHFVHWHTFQDNAKSVTEDVARIRSHPLVPKHIPIYGFIYDVKTGRLDEVAEASSA FT GRPAA" FT CDS complement(313549..313821) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1831" FT /product="conserved hypothetical protein" FT /function="COGs COG0288" FT /db_xref="GOA:Q6N8S2" FT /db_xref="InterPro:IPR001765" FT /db_xref="UniProtKB/TrEMBL:Q6N8S2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27272.1" FT /translation="MTKPAGNYDAVLSANDHYAKDFGDKANLALPPARHFAILTCMDAR FT LDPAKYAGLAEGDAHVIRNAGGRASDDAIRSLVISHKLLGTQECS" FT CDS complement(314020..314778) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1832" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N8S1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27273.1" FT /translation="MLVLASICVLSPAVAEPGKPKPDFAVKTKAIDGTVTLDAAIKADA FT KLAESCLAEGKKWIAERRTEAEPEFKSDPELFRNGPWTYERSYTTDSLVADRYVSILRT FT DYSYTGGAHPNTDIDTILWDKQLSRRISIRPFFTDLSDGSPAMRAMVDGIVTALKAEKK FT ERGADEEDTAYIKSIEPKLLKIGPVTLAPSTTAGKSSGLTFHYAPYAVGAYAEGEYEAF FT VPWTALKPYLSADGSAIFGGDRPKQERKAE" FT sig_peptide complement(314731..314778) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.792) with cleavage site probability FT 0.787 atresidue 16" FT CDS complement(314866..315267) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1833" FT /product="PilT protein, N-terminal" FT /function="InterPro IPR002716" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:Q6N8S0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27274.1" FT /translation="MDASAALAMFLDEREHLANDEVFESLADQQFVVPAHWHAEIGNAL FT ATNVRRGRLAPDKLEYALHNLKILEVITQSPPELDDVAGTVRRALDSGLTYYDELYVRL FT AEVRNLPLFTFDGQMRKAARQRGVEILPV" FT CDS complement(315273..315530) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1834" FT /product="hypothetical protein" FT /function="InterPro IPR006442" FT /db_xref="InterPro:IPR006442" FT /db_xref="UniProtKB/TrEMBL:Q6N8R9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27275.1" FT /translation="MKQVGIFEAKTHLSSLLDEVENGAEVTITRHGKPVARLVQASSEL FT SAEAIARRRQAIRNLRSLARDLKLNPTHDEIKSWINEGRR" FT CDS complement(315594..317753) FT /codon_start=1 FT /transl_table=11 FT /gene="mutB" FT /locus_tag="RPA1835" FT /product="methylmalonyl-CoA mutase, subunit alpha, FT N-terminus" FT /function="InterPro FT IPR006098:IPR006099:IPR006100:IPR006158:IPR006159 COGs FT COG1884" FT /EC_number="5.4.99.2" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8R8" FT /db_xref="InterPro:IPR006159" FT /db_xref="UniProtKB/TrEMBL:Q6N8R8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27276.1" FT /translation="MSKIPNFAEIAFQPTAAPAPAGEAQPWLTPEGILVKPGYSEADVA FT GIDFLDTWPGVAPFLRGPYPTMYVNQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGLSV FT AFDLATHRGYDSDHPRVAGDVGMAGVAIDSIYDMRTLFAGIPLDQMSVSMTMNGAVLPI FT LALYVAAADEQGVSPEKLSGTIQNDILKEFMVRNTYIYPPVPSMRIISDIFAYTSQKMP FT KFNSISISGYHMQEAGATQDLELAYTLADGVEYVRAGIAAGLDVDKFAPRLSFFWAIGM FT NFFMEVAKMRAARLLWAKLLTQFDPKQQKSLSLRTHCQTSGWSLTAQDVFNNVSRTTIE FT AMAATQGHTQSLHTNALDEALALPTDFSARIARNTQLFLQQESGTTRIIDPWGGSYYVE FT RLTHDIAVKAWAHIQEVEALGGMAKAIEAGVPKLRIEEAAAKTQARIDTGRQSVIGVNK FT YKPTDETPIDVLKVDNSTVRRLQIDKLGRLKKERVQADVDAALLALTRSASEGNGNLLA FT LAIDAARKKATVGEISDALEKVYGRHRAEIKSITGVYKREVASMADRMEKVQALIDAFE FT DAEGRRPRILVAKIGQDGHDRGQKVIASAFADIGFDVDIGPLFATAEEAARQAVENDVH FT ILGVSSLAAAHLTAVPELKAALKKQGREDIMIIIGGVVPPQDYDALYKSGAEAIFPPGT FT VIADAAEELIHKLNARLGHSSQAAE" FT CDS complement(317816..318280) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1836" FT /product="DUF636" FT /function="InterPro IPR006913" FT /db_xref="GOA:Q6N8R7" FT /db_xref="InterPro:IPR006913" FT /db_xref="UniProtKB/TrEMBL:Q6N8R7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27277.1" FT /translation="MTGTGKAVLSGGCQCGAIRYALSAPPLSTALCHCRMCQKATGAPF FT ASMAEVAKDNFAWTRGQPASFRSSSVAERDFCKDCGTPLGYRLMFCDSIEILTGTFDRP FT DRVVPTMQYGTEARLGWTGTIANLPSKTTLQNYGPDRLAQVFSYQQPDHD" FT CDS complement(318277..320148) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1837" FT /product="possible methylmalonyl-CoA small subunit" FT /function="InterPro IPR000504:IPR006099 COGs COG1884" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8R6" FT /db_xref="InterPro:IPR006099" FT /db_xref="UniProtKB/TrEMBL:Q6N8R6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27278.1" FT /translation="MSSANQELRLAADFAPAGYEDWRKLVDGVLKGAPFEKLISKSYDG FT IQIDPIYVRARDAAPIAGRAPAAPWRIMQRVDHPEPKEANKQALQDLENGATGLTLVFA FT GSVGARGFGLPATQEAIAQVLEGVHLDAGIAIELQFPPQSCDVVRHLADLIKSRGTDPA FT ACDIRFGIDPLGARAVQGSSATDWSEIAKGLGDVAAGLASTGFKGPFLVADGRVIHDAG FT GSEAQELAYVLGCSVAYLRALEAAGVSPEAARGMIYARLSADADQFLTLSKFRALRLLW FT ARIEQACGVTPKPLFVAAETAWRMLTQRDPYVNMLRATMATFAAALGGANSVQVLPHTL FT ALGLPDSFARRVARNTQLILLEESNLDKVADPAAGAGGIEALTKELCDAAWSQFQEIER FT AGGALAALQAGLIQPKVAASRAARDKAIAKRRDVLTGASEFPNLHEAQAKVLDVKPAAV FT PPAGEAKISFTALTPIRVATPFETLRDKSDAVLAAKASRPKVFLANLGTPADFTARATF FT AKSFFETGGIEAIDSEGFTDAAALADAFKASGAAFACLCSSDKAYPAYAAPAAQALRAA FT GAKRIYLAGRPGEQESALREAGVQEFVFAGGDALATLSDAWKGIEAA" FT CDS complement(320306..320797) FT /codon_start=1 FT /transl_table=11 FT /gene="folK" FT /locus_tag="RPA1838" FT /product="putative FT 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine FT pyrophosphokinase" FT /function="InterPro IPR000550 COGs COG0801" FT /EC_number="2.7.6.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8R5" FT /db_xref="HSSP:1KBR" FT /db_xref="InterPro:IPR000550" FT /db_xref="UniProtKB/TrEMBL:Q6N8R5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27279.1" FT /translation="MPRALIALGGNVGDVRATFDKAIANICGMTQAELIARSPDYATPP FT WGDEQQDRFVNACVAIETALDPHALLFTLHKIEKRFGRDRANERRWGPRTLDLDLIAYD FT DAVINRPDLTLPHPRLFERAFVLVPLLDVVPDPVIAGRSLKDALAGLSTAGIERLPDRD FT " FT CDS complement(320799..321164) FT /codon_start=1 FT /transl_table=11 FT /gene="folB" FT /locus_tag="RPA1839" FT /product="putative dihydroneopterin aldolase" FT /function="InterPro IPR006156:IPR006157 COGs COG1539" FT /EC_number="4.1.2.25" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8R4" FT /db_xref="HSSP:1NBU" FT /db_xref="InterPro:IPR006156" FT /db_xref="UniProtKB/TrEMBL:Q6N8R4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27280.1" FT /translation="MNDTIFISGLVLHARHGVMEHETEVGQRFVIDLELSADLSESSRT FT DRLSDTVSYSNVVACTTAAFKDANYRLLERAAGAVADAILASFDKITAVKVTVHKPHAP FT IPAIFEDVGVIITRRRS" FT CDS complement(321161..322018) FT /codon_start=1 FT /transl_table=11 FT /gene="folP" FT /locus_tag="RPA1840" FT /product="dihydropteroate synthase" FT /function="InterPro IPR000489:IPR006390 COGs COG0294" FT /EC_number="2.5.1.15" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8R3" FT /db_xref="HSSP:1AJ2" FT /db_xref="InterPro:IPR006390" FT /db_xref="UniProtKB/TrEMBL:Q6N8R3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27281.1" FT /translation="MTASPSLPASPAAPAKPSQLRDLLARPAAAVMGILNVTPDSFSDG FT GDYLAPEQACAHAAEMIADGAEIIDIGAESTRPYGSQPVSAAEELRRLQPVLEAVVALG FT TPVSIDTMKADVAAWALDHGAAIANDVWGLQRDPEMAGVIAARRAPVIMMHNRDAADPA FT IDIVADINAFFERSMTIATKAGIAEELIVLDPGIGFGKTPQQSMITLARLREFASFGRP FT LLVGASRKRFISTVVPSEPKQRLGGSLAAHLIAVENGAKIIRAHDVAATSQALKVAHAI FT RDSR" FT CDS complement(322084..322491) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1841" FT /product="conserved unknown protein" FT /db_xref="GOA:Q6N8R2" FT /db_xref="InterPro:IPR003583" FT /db_xref="UniProtKB/TrEMBL:Q6N8R2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27282.1" FT /translation="MTYPIAQLDGITEVAASKLKSVGIRTTEALLEAARTVKGRKALAA FT KTGFTEQQLLQWANLADCMRVPGLGKAKADLLRAAGVSTLREFTHRNPARLAQNMKEAN FT LKRKLVRALPSEKEVGQLIEQARKLPLKITY" FT CDS complement(322509..322877) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1842" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N8R1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27283.1" FT /translation="MDELIERLADKAGLDKSVAGKTIGIILAFLRNEGPPEPVQALIDS FT IPGAEAAIEAAGSSRGGLSRLIGGGVMAMGTKLLGLGLGMSQIQTIARELFKAGRDRIG FT AEKMGAIIEGTPGLRQFT" FT CDS 323214..324824 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1843" FT /product="conserved unknown protein" FT /function="InterPro IPR001687 COGs COG0433" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR008571" FT /db_xref="UniProtKB/TrEMBL:Q6N8R0" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27284.1" FT /translation="MAASGIASGDTEDKIFIGKGEQPAWLTLALANRHGLVTGATGTGK FT TVSLQVMAEGFARAGVPVFAADIKGDLSGIAEVGEAKDFVLKRAQEIGLKFQPDQFTTV FT FWDVFGEQGHPVRATVSEMGPLLLSRMLDLNDVQEGVLNVAFRVADDMGLPLMDMKDLR FT AMLDAIAPIAQKVADNSDVNADIRQAAQSLGNVTKQTVGTIQRQLLVLENQGGEKFFGE FT PALQLKDFIRTDSQGRGLVNILVADKLMTNPRLYATFLLWMLSELFEELPEVGDPDKPK FT LVFFFDEAHLLFNDAPKPLMDKIEQVVRLIRSKGVGVYFITQNPIDVPDRVLAQLGNRV FT QHALRAFTPRDQKAVAAAADTFRPNPKLDTAKAITELGKGEALVSFLEGNGTPAMVERV FT LVRPPSARIGPITPEERKAIIAASPVRGKYDTTVDSESAYEKLRARIDGKSASEGPAPG FT EGGILGQLGGLFSTVFGTNTPRGKLTTGQLVARNVARTVATTVVGGVAAELGKKVGGSL FT GSSVGRSIVRGTLGGMLRR" FT CDS 325033..326439 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1844" FT /product="putative peptidase" FT /function="InterPro IPR002933 COGs COG0624" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Q9" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27285.1" FT /translation="MSASSHVQTVLARADADFDSALQRLFALLRIKSISADPAFAADCK FT AAAEHLAADIASIGFDAEVRPTAGHPAIVAKAKSNTGNRPHALFYGHYDVQPVDPLELW FT HRPPFEPVIADHADGRKIIVARGAQDDKGQLSTFIEACRAWKDATGELPIDLTIVIEGE FT EEVGSKNFVPFLDAHKKDLAADFALVCDTGMWDPATPAITTSLRGLVYEEVKIKAANRD FT LHSGVYGGGAQNPIRVLTRILGGLHDEHGRITIPGFYDGVKDLPPEILAQWKGLNLTAE FT SFLGPIGLSIPSGEDDRLLIEQLISRPTCDINGIVGGYTGEGSKTVIAAEASAKVSFRI FT VEGQDPNKIRDAFRAYVTARLPGDCRAEFLDHSNGAAIALPWDMKPLTAASRALTEEWG FT KEAVLIGSGASIPIVADFKRTLGLDSVLIGFGLDDDNIHSPNEKYDLNSFQKGIRSWVR FT ILGALADAPR" FT CDS 326774..329074 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1845" FT /product="putative tonB-dependent receptor protein" FT /function="InterPro IPR000531 COGs COG1629" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Q8" FT /db_xref="InterPro:IPR010105" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27286.1" FT /translation="MSNFKNNKNRLYLGVAAGVVTATVASLSASPVRAQEAERRVLPPV FT SVDAPQQRARSATRTAQPRATPQRAARVAPRRAAEPPPPPAAPPTTMGSTRTIGAPAPA FT YAGGQVAQGGTLGLLGSTSVMNTPFSTVNFTSQLIQDQQARTAADTLINDSSVRLSTGS FT DGFDDTFVIRGFAVSATDVGLNGLYGLASSQRVPAQIIERIELLKGPGALINGIAPSGA FT IGGGINIVTKRATDEPFLRLTPFFMSAANYGLHLETSQRFGANKEWGVRFNGVGRNGEA FT SIRDGNFQSGLGAVAIDYRGDRLRWTLDLFSQNDNTDNFRPQISLLPTATAIPAPPDAR FT SNWYPDTRLRQKDNTAATALEYDLTNWLTAYAGVGYRDGSNYQTFPRSATAVDALGNFQ FT VQNTYYDSYSKTLSGNVGFRSRFDTGFIGHKLNVAYTGFFQEAGNAYIQGGTTASNIYN FT PAPLPAVTLDRYSPRHASDSTLTSVAVVDTMSFLNESVLLTLGGRHQMVKQESYATTGT FT NIGALTSTYDASATTPLAGIVVKPWTNVSLYANYAEGLTRGTIVGGNFSNAGTILAPYK FT SKQQEAGVKVDWGTITTTAAVFQIARPSLITTAANAQAYDGEQRNRGLELNLYGLILPG FT LRGMASATFINPELTNPTDPTQRGNAAAGVPDKAFSAGLDWDTPWVRGLALNGRVIHTG FT SAYLTTANTLSFPGWTRLDIGARYTTTALTGKPVTFRANIENVTGETYWLTTGTYVTVG FT APRTYLLSAAFDF" FT sig_peptide 326774..326878 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.958 atresidue 35" FT misc_feature 326807..326875 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 329188..329922 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1846" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q7" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE27287.1" FT /translation="MNKLSLSIVALLGAVVPAQAHQIWIEQADGQAVVRFGEFGENLRE FT ASPGLLDKFGKVTGTLLSAKGEQKAEASKTASGFKLPFTAAAGDSIVAEDASYPLYTWK FT QQDKDVRNWFYPAARLITGFAAQQPKLVLDLVPAGQPGQFKLVFKDQPKPKTKVTLTTQ FT SGWAKEAHTDAQGLVSFDMPWKGVYVAEVSLNDKTAGERSGPKGAEPYDAVSYATTVTY FT EKADGLPPLPPAPRATPAAPSK" FT sig_peptide 329188..329250 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.978 atresidue 21" FT CDS 329919..330200 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1847" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27288.1" FT /translation="MIARVHRARTIGPLIARIAAAAAGGYGIAALLSVAVLALPISKPQ FT AVLTGQLASFAVCAAVVIWVFAARSALRAWIGLVVVAAVLAPLAWFAS" FT sig_peptide 329919..330035 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.978) with cleavage site probability FT 0.845 atresidue 39" FT misc_feature order(329976..330044,330054..330122,330141..330194) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 330262..331836 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1848" FT /product="Uncharacterized iron-regulated membrane protein FT DUF337" FT /function="InterPro IPR005625 COGs COG3182" FT /db_xref="InterPro:IPR005625" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27289.1" FT /translation="MSDLHTWTGLLLGWVLYAMFLTGTVSFFKEELSQWMRPELPRVTQ FT ALDPAVVAERVADEIGRIAPNATQWSIKLPEGRSNSVYAFWRLPIAQDPRGFGEGHFDA FT VTGRQVEARGTLGGDFFYRFHFQFYYMSPFWGRLLAGLAAMFMLIAIVAGVITHKKIFT FT DFFTFRWGKGQRSWLDAHNALSVFGLPFHVMITYTGLVTLMALYVPWGERAAIKTPAER FT QQLMAELSAFIQPGKPAAEAAPLGSIETMVRQAQVRWGTPDVGRVNAADPGNAAARIAV FT TRGDAGRVSMSPDYLEFDGVTGKLLTVHDHVGAAAETRGVLYALHIGRFSDLETRWLYF FT IVSFMGTAMVGTGLVMWTVKRRQKLPDPERPYFGFRLVERLNIASIAGLSIAMSAFLWA FT NRLLPTTMAERAFWEIHVFFIVWGLTLLHALLRPARAAWVEQLWTAAALLALIPVLNAM FT TTLRPLWHSFAVGDWVFVGTDLMCWTLALLHAVLAIRTARHGARVRPPRGSAKRHALPT FT MSSEAAT" FT misc_feature order(330274..330342,330661..330729,330817..330885, FT 331270..331338,331495..331554,331573..331641, FT 331684..331743) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 331833..332120 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1849" FT /product="conserved hypothetical protein" FT /function="InterPro IPR001588" FT /db_xref="InterPro:IPR001588" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27290.1" FT /translation="MSHALAQALCLLGFTAFAFAMRRPQNEILRRSLRRPVVLVLRAIG FT ACLLAIALAVVVAVSGWGFGLVKFSGHTTLAAALVYCALIGYGRRAGLRQ" FT sig_peptide 331833..331895 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.991) with cleavage site probability FT 0.765 atresidue 21" FT misc_feature order(331842..331895,331941..332009,332037..332096) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(332160..334157) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1850" FT /product="methyl-accepting chemotaxis receptor/sensory FT transducer" FT /function="InterPro IPR002132:IPR003660:IPR004089:IPR005829 FT COGs COG0840" FT /db_xref="GOA:Q6N8Q3" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27291.1" FT /translation="MRQLYSASKHALRSSFNRIKIGLRFKIAMLGLIGVALVGSACLLG FT LRESADAERRSEASVALRFDVVQLSADYLQAGLIANEFLRTSDDKLIAKHEAAATAAKR FT RLQDIERRLGQSESDEAAKQSTALLTGLNLYLTRFQNLLSAKRVLGLTEHDGLQGKLRD FT ATRRLEAKLAEIEDPRLSVQMLTMRRLEKDFILKGREKDGDDLIERASDFAGALSKTDL FT AADQEKELTALIGGYKSSFLAFMVSQQSLNEEIEDFGSVFARNRPTLDALITSAEARYR FT ASQASAAQVRNLLDWIIGGVTLGVAALALLVGQRIAGSVTRTTAAMQRLAAGDFEAVLP FT GLERRDEIGEMARAVEAFKAASQRAAREEAEAKIAQQQIEAEHRRTDMHKLADGFEVAV FT GKVIETVFLASSSLESSAGSLTHTAETSRQLTIATASVSSEVSACVGTVAASAEQLLAS FT VDDIGRRIEESTTMTDAAVQQTRQTSEHVLQLAHAGDRIGDIVGMIQTIARQTNLLALN FT ATIEAARAGDAGRGFAVVAFEVKALAEQTAKATHDIQRQVADIQQATRSSASSIDEIVG FT LIERVSETIATISAAIEKQGLETRTMSDHVAKAASETVHVGTSIERVQRGAEHVESASR FT DVFAAAQSLANDSNVLRREVANFLGSVRSA" FT sig_peptide complement(334005..334157) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.991) with cleavage site probability FT 0.392 atresidue 51" FT misc_feature complement(334029..334094) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT terminator complement(334429..334450) FT /note="TransTerm prediction, 98+%" FT CDS complement(334613..335686) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1851" FT /product="putative aldolase" FT /function="InterPro IPR001303 COGs COG0235" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Q2" FT /db_xref="InterPro:IPR001303" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27292.1" FT /translation="MPATRSNIMLYSTPGRSASVALVTIASSVPDRQSPQAFANNLLAP FT RLRSPPPSRRDWGTAPPHACCAQVTACCKAFAALGFRQVNAPGNGAHTKRKRMSPAEAA FT RLREVPSDMTEAEWEQRVNLAACYRLVALYGWDDLVDTHISARVPGPEHHFLINPYGLM FT FDEITASSLVKVDLDGNQLTESPYKINPAGFTIHSAIHEVREDAGCVIHLHTPDGTAVA FT SCMDGLLPINQTAHFVTGDLAYHDYEGVALDHDERPRLQRDLSDKNHMLLRNHGTLTVG FT RTVASAFERMYHLERACTMQVRTKMLGPTAYPLEQMVIDKNHDLIANRDAMELRSTKLV FT WPPLLRKLDRIDPSYRS" FT sig_peptide complement(335567..335686) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.808) with cleavage site probability FT 0.728 atresidue 40" FT CDS 336727..337143 FT /codon_start=1 FT /transl_table=11 FT /gene="mucR" FT /locus_tag="RPA1852" FT /product="putative transcriptional regulator MucR" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Q1" FT /db_xref="InterPro:IPR008807" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27293.1" FT /translation="MSDTPGKSYIELTASIVSAYVSNNATQASEIPALIGQVHAALQRL FT SAGRPEVAPQEPAKPAVPVKKSVTPEYLICLEDGKRFKSLKRHLRTQYKMTPEQYREKW FT GLPADYPMVAPNYAVERSQLAKKMGLGQQRRRRK" FT CDS complement(337151..337891) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1853" FT /product="putative short-chain dehydrogenase" FT /function="InterPro IPR002198:IPR002347:IPR003560 COGs FT COG1028" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6N8Q0" FT /db_xref="HSSP:1AE1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6N8Q0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27294.1" FT /translation="MVELTGKRALVTGASRGIGAAIAKDLAAKGADVAITYERSADRAA FT EVVRAIAAKGRRGVAIQADSADPAALKSAVNEAAAKLGGLDILVNNAGIGRVGPITELS FT LADIDALLNINVRAVVLASQAAIPHLGQGGRIISIGSTLAERVPFAGSTVYAMTKSALH FT AFTRGLSRELGPQGVTVNLVQPGSIDTDMNPASGEQADQLRALTALGRYGKPEEIAAVV FT AFLASPAAGLITGTMITADAGFSA" FT misc_feature complement(337172..337237) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 337969..338604 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1854" FT /product="possible transcriptional regulator, TetR family" FT /function="InterPro IPR001647 COGs COG1309" FT /db_xref="GOA:Q6N8P9" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q6N8P9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27295.1" FT /translation="MMQKSDPTLDHRAARPRGRPRAFDRARALAQATRLFWIKGYEATS FT IADLTEAMGIGAPSLYAAFGSKEALYGEAVRHYEANYEQLVWGRFRTATSARAALEAFL FT LDSASALTGAPDDHPLGCMVTLSAVGSEGHAELGELVRSARAVTLQRLEARLSEAIAVS FT ELPTSTDIHAVARFYQAVQAGMSILARDGASRAELEAVARLALARGDV" FT CDS 338726..339337 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1855" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8P8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27296.1" FT /translation="MQAKRRGRKSATARDQGRAEVDGFRASHLDLSERDIMTVEGLARV FT TIDDSESPLAWLARRKGRDGRALISAEQFVAGERLRADFTRGNLTPRITSNWGAPTGRA FT GGGGAGEMTDLVVAARQRVQLALEACGPEFSGILLDVCCFLRGLEDVERERGWPSRSAK FT VVLQLALDRLARHYGLAPRTEQARPRLRSWLADDAAFVVS" FT CDS complement(339367..339795) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1856" FT /product="Protein of unknown function UPF0050" FT /function="InterPro IPR003808 COGs COG2166" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR003808" FT /db_xref="UniProtKB/TrEMBL:Q6N8P7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27297.1" FT /translation="MTIDEIRDNFALLDEWDDRYRYVIELGRMLEPMPEEEHSAANKVQ FT GCASQVWLSRKLTRNANGDPILSYLGDSDAHIVRGLIAILLTLVSGRTPKEILSAEPIA FT VFDELGFREHLTPQRSNGLRSMIERIKADARDTLAAST" FT CDS complement(339911..340333) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1857" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6N8P6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27298.1" FT /translation="MFFLLRLAFWIGVVLVFLPRESTPDSEKLPQIGASEAVSAASAAV FT SDFSQFCKRQPAACEVGEQAATVIGHRAQEGARKLYQIITEKRGEPTGAIGAADAPDPS FT LAPRDTLTAEDLKIEWKLPGAETASTDTVAKPTATN" FT CDS 340740..342572 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1858" FT /product="sensor histidine kinase with a PAS domain" FT /function="InterPro FT IPR000014:IPR003594:IPR003661:IPR004358:IPR005467 COGs FT COG0642" FT /db_xref="GOA:Q6N8P5" FT /db_xref="InterPro:IPR000014" FT /db_xref="UniProtKB/TrEMBL:Q6N8P5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE27299.1" FT /translation="MAVSRIIGECLDALLHPSARYDALTTARHRAFLAPRLLGSLAAFA FT AFPLYLVLRGAPTALEAAAFSWLIAPILVAWFLSRTGRYEQAHLLSSLALTSLVVGVAA FT LTGGIQSFAAVWLVVIPIEAALSASRRAVTFAASLALGGAALLIGLGLFGVLPTPTAGA FT ASSATLAAFGITSAALYASGLAYGAVWLARTNGALLNVEEERYRLLARNMSDVISRHNR FT NGAVRFISPAAENLLGTPVARLAEHGLFDRVHVADRPAYLKAMSDAARGRETGSVEFRI FT RRDVARDERGRPSAAEFVWVEMRCRPLESNLTTTAASNAGETEVVAVMRDITERKIHEQ FT ALDQARAEADRADAAKSRFLATMSHELRTPLNAIIGFSDMILQDDVLMLGPERRKEYAQ FT LINDSGQHLLSVVNGILDMSKMESGSFEIVPEPFAPRPALLNCCNLLALKARDSGIDLV FT TRAPENLPEVVGDPRAFKQILLNLVSNAIKFTERGGTVTVSAAVEGTRLVLRVTDTGVG FT IAEEDLKRLGDPFFQAGKTYQRRHEGTGLGLSIVKSLVRMHGGEIEVQSQIDCGTTVTV FT SLPLALPAGSNVTTLNPAMPADSPAPDYQVKKSA" FT misc_feature order(340833..340901,340914..340973,341031..341099, FT 341142..341210,341244..341312) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 342565..343350 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA1859" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6N8P4" FT /db_xref="InterPro:IPR002477" FT /db_xref="UniProtKB/TrEMBL:Q6N8P4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id=" |