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EBI DbfetchID BX572594; SV 1; linear; genomic DNA; STD; PRO; 348971 BP. XX AC BX572594; XX DT 09-DEC-2003 (Rel. 78, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 XX KW complete genomes. XX OS Rhodopseudomonas palustris CGA009 OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; OC Bradyrhizobiaceae; Rhodopseudomonas. XX RN [1] RP 1-348971 RX DOI; 10.1038/nbt923 RX PUBMED; 14704707. RA Larimer F.W., Chain P., Hauser L., Lamerdin J., Malfatti S., Do L., RA Land M.L., Pelletier D.A., Beatty T.J., Lang A.S., Tabita F.R., RA Gibson J.L., Hanson T.E., Torres y Torres J., Peres C., Harrison F.H., RA Gibson J., Harwood C.S.; RT "Complete genome sequence of the metabolically versatile photosynthetic RT bacterium Rhodopseudomonas palustris"; RL Nature Biotech 22(1):55-61(2004). XX RN [2] RP 1-348971 RG Rhodopseudomonas genome consortium RA Larimer F.W., Harwood C.S.; RT ; RL Submitted (24-JUL-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Rhodopseudomonas genome consortium, the DOE RL Joint Genome Institute, Production Genomics Facility, 2800 Mitchell Drive, RL Walnut Creek, CA 94598, USA, and the Genome Analysis Group, Oak Ridge RL National Laboratory, 1060 Commerce Park Drive, Oak Ridge, TN 37831, USA; RL larimerfw@ornl.gov. XX DR EMBL-CON; BX571963. DR RFAM; RF00174; Cobalamin. XX FH Key Location/Qualifiers FH FT source 1..348971 FT /organism="Rhodopseudomonas palustris CGA009" FT /strain="CGA009" FT /mol_type="genomic DNA" FT /db_xref="taxon:258594" FT CDS complement(85..816) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0321" FT /product="two-component transcriptional regulator, LuxR FT family" FT /function="InterPro IPR000792:IPR005143 COGs COG2771" FT /db_xref="GOA:Q6NCZ5" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR005143" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:Q6NCZ5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25765.1" FT /translation="MIVGEDQLWGRRALEFVDSVERLEAPALISRFESLIASCGFTAYI FT MAGLPSRNAGLPELTLANGWPRDWFDLYVSENFSAVDPVPRHGATTVHPFVWSDAPYDR FT DRDPAAHRVMTRAAEFGLVEGYCIPLHYDDGSAAISMAGKDPDLSPAARGAMQLVSIYA FT HSRLRALSRPKPIRRNRLTPRECEILQWAAQGKTAWEISVILCITERTVKFHLIEAARK FT LDAANRTAAVAKALTLGLIRL" FT CDS complement(1053..1994) FT /codon_start=1 FT /transl_table=11 FT /gene="gshB" FT /locus_tag="RPA0322" FT /product="putative glutathione synthetase" FT /function="InterPro IPR004215:IPR004218:IPR006284 COGs FT COG0189" FT /EC_number="6.3.2.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P61396" FT /db_xref="InterPro:IPR004215" FT /db_xref="InterPro:IPR004218" FT /db_xref="InterPro:IPR006284" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/Swiss-Prot:P61396" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25766.1" FT /translation="MTLKVAVQMDPIARINIRGDSTFALLLEAQARGHAISYFTPDKLS FT LRGNDVVASVQSLKVRDQEGDHFTLGEPARVDMRSYDVVLLRQDPPFDLAYITSTHLLE FT RIHPATLVVNNPASVRNAPEKLFVMDFTELMPPTLISRDKDEINAFRAEHGAVVMKPLH FT GHGGAAVFRVLPQDINFGSLYDMFAVTFREPWVIQRFLPEVKHGDKRIILVDGEFAGAV FT NRVPAEDDLRSNMVRGGAAAATELSPREREICATLGPKLRERGLLFVGIDVIDGYLTEI FT NVTSPTGIRAVARLGGPDIAAKIWDVIEAKRA" FT CDS complement(2067..2459) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0323" FT /product="Protein of unknown function UPF0102" FT /function="InterPro IPR003509 COGs COG0792" FT /db_xref="GOA:Q6NCZ4" FT /db_xref="InterPro:IPR003509" FT /db_xref="InterPro:IPR011335" FT /db_xref="PDB:3FOV" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCZ4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25767.1" FT /translation="MAKTDRSQPSVLARIAAFRTGLSAEASAADYLERQGYRILARRFK FT TRCGEIDLVAQRDALVAFVEVKARGNVDDAAYAVTPRQQSRIVAAAEAWLSRHPEHAMS FT ELRFDAILIAPNTAPRHLPGAFDATP" FT sig_peptide complement(2373..2459) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.832) with cleavage site probability FT 0.724 atresidue 29" FT CDS complement(2446..3408) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0324" FT /product="Uroporphyrin-III C/tetrapyrrole FT (Corrin/Porphyrin) methyltransferase" FT /function="InterPro IPR000578:IPR000878 COGs COG0313" FT /db_xref="GOA:Q6NCZ3" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR008189" FT /db_xref="InterPro:IPR014777" FT /db_xref="InterPro:IPR018063" FT /db_xref="UniProtKB/TrEMBL:Q6NCZ3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25768.1" FT /translation="MTMRVKPEISAPPPAAAEPNARTFLVAGQRLVAPRIAPGLHLVAT FT PIGHLGDITLRALETLAGADLIACEDTRITHRLLERYSISARLKPYHEHNAAQARPKLL FT EMLAQGQSVALVSDAGTPLISDPGYKLVREVYAAGHQVIGLPGASAVLVALSLAGLPTD FT RFFFDGFLPSKQGARRARLGELAAIDATLVLFEAGSRIQNSVHDLADLLGATREAAICR FT ELTKLHQEVRRATLAELAAQADTMETRGEFVVVIAPPDPASRVMSDDDLDRWLSEALTR FT HSVKDAVAQAVELSGRHKREIYARALELSRQREADDGED" FT CDS 3621..4820 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0325" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q6NCZ2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25769.1" FT /translation="MASLHDPHTKPLRTTRRTALGLLLGAPLLSACSGVQQSLSDQFGQ FT QQSAAGPAQQPAAVGNGRVKVGLVLPLSAPGNAGLAAQSMKNAAEMALAEFRNPDVQLL FT IKDDAGNPTGAQTATQQALDEGAEIILGPLFAQSVPAAAQAARARGVSVIAFSTDSSVA FT GRGVFLLSFLPESDVNRIIGYAGSIGKRSYAALLPENAYGAVVEAAFKQITSQKGGRIV FT AFEKYGADRAGPARTIAASLASADALLLADDGDALAAVADALGAAGADLKRVQLLGTGL FT WDNPRVFATQALQGGLFAAPDPSGFRAFAGRYRARYGQDPVRTATLAYDGVALVAALAR FT TQGPQRFSAETLTNPSGFAGIDGLFRFRADGTNERGLAVMKVASGGAQAVAGPPKSFGA FT " FT sig_peptide 3621..3743 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.985) with cleavage site probability FT 0.285 atresidue 41" FT CDS complement(4838..5200) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0326" FT /product="DUF24, predicted transcriptional regulator, FT related to MarR family" FT /function="InterPro IPR002577 COGs COG1733" FT /db_xref="InterPro:IPR002577" FT /db_xref="UniProtKB/TrEMBL:Q6NCZ1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25770.1" FT /translation="MTRTHQKVGDLPRSNPAHTPLTAAQGIAAGFRLLEGRWKILILFH FT LFGGRVLRFSELERSIPDVSQKMLAQQLRQLEADGIVARTVHPEVPPRVEYHLTDWGQS FT LCPALDALLGWVEQKP" FT CDS complement(5605..6762) FT /codon_start=1 FT /transl_table=11 FT /gene="hemN2" FT /locus_tag="RPA0327" FT /product="possible oxygen-independent coproporphyrinogen FT III oxidase (hemN)" FT /function="InterPro IPR004559:IPR006638 COGs COG0635" FT /db_xref="GOA:Q6NCZ0" FT /db_xref="InterPro:IPR004559" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR010723" FT /db_xref="UniProtKB/TrEMBL:Q6NCZ0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25771.1" FT /translation="MQASSDPAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARAF FT AREIATTAERIGPRQVSSIFLGGGTPSLMQPSTVAAILDAIARHWQVEPGAEVTLEANP FT TSVEATRFRGYRAAGVNRVSLGVQALDDASLKALGRLHSAEEALNAVAIAKSAFDRYSF FT DLIYARPGQTAAMWEAELRYAIGEAAEHLSLYQLTIEPDTPFYSLHKAGKLPTPDEAEA FT RALYDVTQSVCAELGLPAYEISNHARPGAECRHNLIYWRGHEYAGIGPGAHGRLDIGNA FT RYATATEKRPESWLMRVEATGHGLIADEHLTSEERADEFLLMGLRLAEGIDPQRYQLLS FT GRPLDPSRIALLREEGAIAVDADGRLRVTQEGFPVLDAVVADLAA" FT CDS complement(6752..7384) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0328" FT /product="Ham1-like protein" FT /function="InterPro IPR002637 COGs COG0127" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCY9" FT /db_xref="InterPro:IPR002637" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCY9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25772.1" FT /translation="MHRRITGKLVIATHNPGKLAEMRELLAPYGIEAISAGELGLAEPD FT ETGDSFQANARIKAEAAAKAAQLPAFADDSGLAVDALDGAPGIYSARWAGDAKDFAGAM FT ARIERLLQERGATAPERRTAHFVSALCVAWPDGHIEEVEARADGTLVWPPRGTAGFGYD FT PVFLPEGHSRTFGEMTSIEKHGLPPLGLGLSHRAKAFVKLAEICLAG" FT CDS complement(7436..8149) FT /codon_start=1 FT /transl_table=11 FT /gene="rph" FT /locus_tag="RPA0329" FT /product="ribonuclease PH" FT /function="InterPro IPR001247:IPR002381 COGs COG0689" FT /EC_number="2.7.7.56" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCY8" FT /db_xref="InterPro:IPR001247" FT /db_xref="InterPro:IPR002381" FT /db_xref="InterPro:IPR015847" FT /db_xref="InterPro:IPR018336" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCY8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25773.1" FT /translation="MRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEE FT RLPPWLKGQGRGWVTAEYGMLPRATLERTRREASAGKQNGRTVEIQRLIGRSLRTIVDL FT EALGERQITVDCDVLQADGGTRTASITGAWVALADCLNWMKARNMIKGQVLRDNVAAIS FT CGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRLVEVQGTAERTPFSQDEFLQLMALAQ FT KGVARLVDLQKMAVG" FT CDS 8304..9392 FT /codon_start=1 FT /transl_table=11 FT /gene="hrcA" FT /locus_tag="RPA0330" FT /product="transcriptional repressor of class I heat shock FT genes" FT /function="InterPro IPR002571 COGs COG1420" FT /db_xref="GOA:Q6NCY7" FT /db_xref="InterPro:IPR002571" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCY7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25774.1" FT /translation="MAQHDPIGLIAPNAGLAQLNERSREIFRQIVESYLATGEPVGSRN FT ISRLISVPLSPASVRNVMADLEQLGLIYAPHTSAGRLPTELGLRFFVDALMQIGDLTEP FT ERQSIQAQLSSVGRAHTVEAALGEALTRLSGLTRAAAVVLTAKANVRLKHIEFVRLEPE FT RALVILVAEDGQVENRVLTLPPGVPSSALIEAANYLNARIRGRTLAEARLELESLMVQN FT KAELDQLTQKVIAAGIASWSGGDGEDRQLIVRGHANLLEDLHALDDLERVRLLFDDLET FT KRGVIDLLGRAESADGVRIFIGSENKLFSLSGSSTIIAPYSDGAGHIVGVLGVIGPTRL FT NYARVIPMVDYTARIVSRMLGG" FT CDS 9480..10106 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0331" FT /product="possible heat shock protein (HSP-70 COFACTOR), FT grpE" FT /function="InterPro IPR000740 COGs COG0576" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCY6" FT /db_xref="InterPro:IPR000740" FT /db_xref="InterPro:IPR009012" FT /db_xref="InterPro:IPR013805" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCY6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25775.1" FT /translation="MMTETDGQKDNNQDTAQAAADPVVSKPYIMPDDPEEGSNEALVRE FT AADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAVPADA FT RANAEPGLKALIEGVELTERSLLNALEKNGVKKFDPKGQKFDPNFQQAMYEVPDPSVPA FT GTVVQVVQAGFTIGDRVLRPALVGVAKGGAKAAPSDGGGETGNLN" FT terminator 10181..10201 FT /note="TransTerm prediction, 98+%" FT CDS complement(10213..11154) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0332" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6NCY5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25776.1" FT /translation="MRQIARLFAIALLSATATNAVAADAVYPRGIRVGIVPMPGLNQST FT AFLGFESGDQGVKVLVSELPGPAFDQIDAAFKAAPEGSLGNVKPEKIETAAGNGYFTAE FT DAVVGPDKVRRYSLIVPGSKLFSGYVAVQVPATEAKTYSDEAIKKMLSSVSVRQQVPVD FT EQVAQMPFKIRELGDFKTVRTLAPGAALLLTDGNEEAVETGPFMVLGLIGSVPEKTDDR FT ARFAQQAAEAIPGVRESKITMSEPMRIDGAPGFETRVTGVSGKNNTPVTVVQWLRFGSA FT NVAMRVIGSSPKDQWETAFPRFRKVRDGLQPR" FT sig_peptide complement(11086..11154) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.996 atresidue 23" FT CDS 11489..13384 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaK" FT /locus_tag="RPA0333" FT /product="heat shock protein DnaK (70)" FT /function="InterPro IPR001023 COGs COG0443" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCY4" FT /db_xref="InterPro:IPR001023" FT /db_xref="InterPro:IPR012725" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCY4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25777.1" FT /translation="MGKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTTPSIVAITDD FT GERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWVE FT ADGKTYSPSQVSAFILQKMKETAEAHLGQKVDQAVITVPAYFNDAQRQATKDAGKIAGL FT EVLRIINEPTAAALAYGLDKAKTGTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFL FT GGEDFDMRLVNYLADEFQKEQGIDLRKDKLALQRLKEAAEKAKIELSSTTQTEINLPFI FT TADQSGPKHLTMKLTRAKFEALVDDLVQKTIEPCRKALKDAGLTAGEISEVVLVGGMTR FT MPKVQEVVKQLFGKEPHKGVNPDEVVAIGAAIQAGVLQGDVKDVLLLDVTPLSLGIETL FT GGVFTRIIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKMLGQFDLMGIP FT PAPRGMPQIEVTFDIDANGIVNVSAKDKATGKEQQIRIQASGGLSDSEIDKMVKDAEAN FT AAEDKKRREAVDAKNHADALVHSTEKALAEHGSKVDESERRSIEDALSDLREALKGDDA FT EAIKAKSNTLAQASMKLGEAMYKQAEAAGGAQQAGKDDVVDAEFTEVDDDKKKSA" FT CDS 13599..14738 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaJ" FT /locus_tag="RPA0334" FT /product="heat shock protein DnaJ (40)" FT /function="InterPro IPR001305:IPR001623:IPR002939:IPR003095 FT COGs COG0484" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCY3" FT /db_xref="InterPro:IPR001305" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR002939" FT /db_xref="InterPro:IPR003095" FT /db_xref="InterPro:IPR008971" FT /db_xref="InterPro:IPR012724" FT /db_xref="InterPro:IPR015609" FT /db_xref="InterPro:IPR018253" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCY3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25778.1" FT /translation="MSTTKRCYYETLEVERNADDSTLKSAFRKLAMKWHPDRNPGDPQC FT EIKFKEINEAYEVLKDGDKRAAYDRYGHAAFEQGGFGGGAGFGAGFASSFSDIFEDLFG FT MAAQRGRGTGRERGADLRYNMEITLEDAFKGKTAQIEIPVSVTCEACSGTGAKAGTKPK FT TCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIEDPCPSCTGSGRVTKERTLSVNIPQ FT GVEDGTRIRLAGEGEAGLRGGPPGDLYIFLSLANHAIFQRDGADLHCRVPISMVTAALG FT GEFEVPTIDRGKTKVKVPSGTQTGRRFRIAGKGMPVLRSRQVGDMYVQVVVETPQNLTK FT KQQELLAEFEKLSSGETQPEAVGFFSKVKEFFGSRASAP" FT CDS 14832..15437 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0335" FT /product="putative phospholipid N-methyltransferase" FT /function="InterPro IPR000051:IPR001737 COGs COG0030" FT /db_xref="GOA:Q6NCY2" FT /db_xref="InterPro:IPR001737" FT /db_xref="InterPro:IPR020596" FT /db_xref="UniProtKB/TrEMBL:Q6NCY2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25779.1" FT /translation="MALQSSVRAFKKPPRPLVDEVRFLRSWIEKPLHMGAVMPSGKLLA FT RTMARYVDIQSDGPVIELGPGTGAITNALVEHGVDQKRLVLLEFDPGFCALLRERFPLA FT KVVQGDAYRLRDSLWDALEIPATAVVSGLPLVTKPMLTRMKLIRDAFTLLEPGAPFVQF FT TYSVAPPIPKSLPGVSTEGSERIWMNVPPARVWVYRKR" FT CDS 15539..16120 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0336" FT /product="NADPH-dependent FMN reductase" FT /function="InterPro IPR005025 COGs COG0431" FT /db_xref="InterPro:IPR005025" FT /db_xref="UniProtKB/TrEMBL:Q6NCY1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25780.1" FT /translation="MSAVKILIIPGSLRTGSHNVRLAATAAHEFARADIDTTWLSLADY FT ALPIYDADFEAKSGVPKNAVGLKRMIGAHHGVLIVSPEYNSAPPPLLKNAIDWVSLVED FT PHETQGQVFRDRVFALAAASEGKLGGARCLAALRLILSGCRAPVIPNQLTLSFAHEAYD FT DNDRLKHPADATALQAMVRQLIDFAQQMMR" FT CDS 16128..16841 FT /codon_start=1 FT /transl_table=11 FT /gene="pyrF" FT /locus_tag="RPA0337" FT /product="orotidine 5`-phosphate decarboxylase" FT /function="InterPro IPR001754 COGs COG0284" FT /EC_number="4.1.1.23" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCY0" FT /db_xref="InterPro:IPR001754" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR014732" FT /db_xref="InterPro:IPR018089" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCY0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25781.1" FT /translation="MAPVDIPDRDRLIVALDLPDLRVAEAMVDRLGDSVGFYKIGYQLA FT YAGGLPLARALVGAGKKVFVDLKLHDIGNTVARGVESLSHLGASFLTVHAYPQTMKAAV FT EARGSSKVKILAVTVLTSYDDRDLADAGYRFGVRDLVEARARQAQAIGVDGLVCSPEEA FT AHLRSIVGPEMDLVTPGIRPAGAAAGDQKRIMTPAKAIAAGASYLVVGRPVLDAPDPKA FT AADAIVAEIAAARGS" FT CDS 16867..17175 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0338" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR010753" FT /db_xref="UniProtKB/TrEMBL:Q6NCX9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25782.1" FT /translation="MPKGYWVGRIDVHDLDGYKRDYVAHNGAVFAKYGAKFLTRGGTYE FT AKEGQARSRNVVIEFKDYETALACYHSPEYQALIKARAPFSEGEMVVVEGYDGPQPF" FT CDS 17272..18087 FT /codon_start=1 FT /transl_table=11 FT /gene="dapB" FT /locus_tag="RPA0339" FT /product="dihydrodipicolinate reductase" FT /function="InterPro IPR000846 COGs COG0289" FT /EC_number="1.3.1.26" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCX8" FT /db_xref="InterPro:IPR000846" FT /db_xref="InterPro:IPR011770" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCX8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25783.1" FT /translation="MSEMRLIVAGAGGRMGRALTRAISETEGVVLTGALESPNSELLGK FT DAGTLAGLPANGVLLSADLWSLSANADGIVDFTVPQATIANVAIAAQRGIAHIIGTTGL FT STSDNAVIQSVTDRAVVVKSGNMSLGVNLLAAIAKRVAQSLDDSFDIEIVEMHHRAKVD FT APSGTALLLGEAVAAGRKIDLATHSARGRDGFTGARKPGDIGFASLRGGTVTGDHTVIF FT AGASERIELTHKAEDRMIFAHGALTAARWAKGKKPGLYSMADVLGLGDI" FT CDS complement(18168..19682) FT /codon_start=1 FT /transl_table=11 FT /gene="pgm1" FT /locus_tag="RPA0340" FT /product="phosphoglycerate mutase" FT /function="InterPro IPR000408:IPR005995:IPR006124 COGs FT COG0696" FT /EC_number="5.4.2.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCX7" FT /db_xref="InterPro:IPR005995" FT /db_xref="InterPro:IPR006124" FT /db_xref="InterPro:IPR011258" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCX7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25784.1" FT /translation="MQSRRPVMLVILDGWGWREDPADNAVLQAKTPTFDALWTNGPHAF FT LRTSGKSVGLPNGQMGNSEVGHLNIGAGRVVMQDLPRISDAIANGEIERAPGLVAFIDK FT LKASGGTCHLMGLVSPGGVHSLQDHACALAKILAKAGVKTVLHAFTDGRDTPPKSAVDD FT IVRLRAELPPNVPIATVSGRYYAMDRDNRWERVSKAYGVIADADGPRFADANAVIADGY FT AAGVNDEFIVPAVIGDYQGMRDGDGVLCFNFRADRVREILAALLDSAFAGFPRKQVKQI FT AAAAGMTQYSTALDALMGTIFPPQSLVNGLGQVVADAGLHQLRMAETEKYPHVTYFLNG FT GEEVPYPGEDRIMVPSPKVATYDLQPEMSAPELGDKAVAAIESGKYDLIVLNFANPDMV FT GHTGSLPAAIKAVETVDTQLGHIVAAIRKAGGALLVTADHGNCEMMRDPETGGPHTAHT FT TNPVPVLLVGDNGPLADGQLSDLAPTLLKLMELPQPAEMTGKSLIG" FT CDS complement(19774..20706) FT /codon_start=1 FT /transl_table=11 FT /gene="ogt" FT /locus_tag="RPA0341" FT /product="possible Ada polyprotein (O6-methylguanine-DNA FT methyltransferase)" FT /function="InterPro IPR000005:IPR001497:IPR001680 COGs FT COG0350" FT /db_xref="GOA:Q6NCX6" FT /db_xref="InterPro:IPR000005" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR014048" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q6NCX6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25785.1" FT /translation="MAARAAADNISGMMNLAIADHQLIKPGARDSALADYDCVRRAIAF FT ISQKWKAQPTIEAIADAAGLTPDELHHLFRRWAGLTPKAFMQALTLDHAKSLLRDSASV FT LDAALASGLSGPGRLHDLFVTHEAMSPGEWKSGGAGLSLRYGFHPSPFGTAVIIASDRG FT LAGLAFADPGEEQAAFVDLQQRWPRALCVPDQEATSPLAQRIFDPAQWRAEQPLRVVLI FT GTDFEVRVWETLLKIPLGKAVCYSDIAAKISLPKASRAVGAAVGKNPISFVVPCHRALG FT KGGALTGYHWGLTRKQAMIGWEAGQLRAE" FT CDS complement(20722..21237) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0342" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR016990" FT /db_xref="InterPro:IPR019253" FT /db_xref="UniProtKB/TrEMBL:Q6NCX5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25786.1" FT /translation="MAIEPDLGLDSTEPKLFSARLKPHRALSHNGFLILIGLVGTASFA FT AGLAFWLIGAWPVFGFFGLDVLALAFAFKVSFARARASEEISMTCSELRVRRTSARGEV FT AEWVLNPLWVRLEKIVHHDAGIERLYLVSSGRRLAIANFLGAEEKANFAKALMAALDAA FT RRGPLYPA" FT misc_feature complement(order(21004..21069,21082..21147)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 21260..22045 FT /codon_start=1 FT /transl_table=11 FT /gene="nth" FT /locus_tag="RPA0343" FT /product="endonuclease III DNA-(apurinic or apyrimidinic FT site) lyase" FT /function="InterPro FT IPR000445:IPR001687:IPR003265:IPR003651:IPR004035:IPR005759 FT COGs COG0177" FT /EC_number="4.2.99.18" FT /db_xref="GOA:Q6NCX4" FT /db_xref="InterPro:IPR000445" FT /db_xref="InterPro:IPR003265" FT /db_xref="InterPro:IPR003651" FT /db_xref="InterPro:IPR004035" FT /db_xref="InterPro:IPR005759" FT /db_xref="InterPro:IPR011257" FT /db_xref="UniProtKB/TrEMBL:Q6NCX4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25787.1" FT /translation="MPKTTRRPAKPAAKTPAVSPAKPAKRTAAAKPKSVSAKPAPSRRG FT KSPRRWSAAEVHEAFSRFAKANPEPKGELEHLNPFTLLVAVVLSAQATDAGVNKATRPL FT FAVADTPQKMLALGEDRVREYIKTIGLFRTKAKNVIALSQKLITDFGGEVPNTREALET FT LPGAGRKTANVVLNMAFGQPTMAVDTHVFRVGNRTGLAPGDTPLAVELELERVIPAEFM FT QHAHHWLILHGRYTCLARKPRCEVCLINDLCRWPEKTVS" FT CDS complement(22161..23732) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0344" FT /product="conserved hypothetical protein" FT /function="InterPro IPR000379:IPR001563 COGs COG2939" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCX3" FT /db_xref="InterPro:IPR001563" FT /db_xref="InterPro:IPR018202" FT /db_xref="UniProtKB/TrEMBL:Q6NCX3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25788.1" FT /translation="MSMPLSPRSAVTASMLIAALALPQLGSSAVSQEARPAAPHAERAK FT PNAEQADAVASKAEASPARAELNSLPPDVTTKHSLALPGRTLAFTATAGSIRLFNGKGE FT PQADVAITTYKLDGADARTRPVTFLFNGGPGASSAWLQLGAAGPWRLPIGNSVVASSPP FT VLQANAETWLDFTDLVFIDPVGTGYSRFVASGDEVRKHFYAVEGDISAMAVVIRRWLEK FT NDRLVSPKYLAGESYGGIRGPKVVDNLQTKQGVGVNGLILVSPVLDFRDLSGSSLLQYA FT ARLPSMTAVARQQKGKVNRADLADVESYARSEFLTDLVKGEADKEATTRLADRVSALTG FT IDKTVSRRLAGRFDTREFQREFDRDRGRVTGRFDGAKLGLDPFPDSSAAHFGDPSADSL FT IAPLTSAAVQLTRSTLNWKPDGSYELLNGSVAEQWDFGRGRQPLESTTQLREILSVDPS FT LQVLVTGGLFDLAAPYFGTQMVLDQLPPTLAEKRVKFVVYPGGHMFYAEDAARQSLHDE FT VKAMMK" FT sig_peptide complement(23637..23732) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.538 atresidue 32" FT CDS complement(23855..24823) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0345" FT /product="putative protoporphyrin IX magnesium chelatase FT bchO" FT /function="InterPro IPR000073:IPR000379 COGs COG0596" FT /db_xref="GOA:Q6NCX2" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR000639" FT /db_xref="InterPro:IPR017497" FT /db_xref="UniProtKB/TrEMBL:Q6NCX2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25789.1" FT /translation="MVNPARDPLHTSSSRTAATRPHCPKPDWEQDSHDWPHRDTSRFVE FT AGGLRWHVQLMGRGPALLLLHGTGAATHSWRQLAPLLAEHFTVIAPDLPGHGFTETPAR FT KRMSLEGMASDITALLRTLGHRPMLVAGHSAGVAVLARMCLDGAIAPAGLVSLNGALLP FT IGGRAGRWMLPLARLLASSTMVPRLVARFARRQGLVERMIADTGSSLDPHGIELYRRLV FT CSPGHVAAALTMMASWRLEQLAAELPHLAPHLLLIAGSNDKTIASADAGRVQAIVPGAR FT AIVMPGLGHLAHEERPQDVAGLIVEFAREHGALPPALAAAE" FT CDS complement(25397..26140) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0346" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6NCX1" FT /db_xref="InterPro:IPR007496" FT /db_xref="UniProtKB/TrEMBL:Q6NCX1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25790.1" FT /translation="MLDAAIKALTQILSPPMRSILWRSVGFALALIAVAAIGLQRLLSW FT AATSSELWAEAALGGFQTPLNILSWVLSIAAGLGIVVGAVFLMPAVTSLVAGIFVDEAA FT EHVERESYPHEAPGVALPIGLATWETVKTALLTILVYLVALPFLFVAGAGAIVFFVATA FT WLLGREYFELAAMRFRTAPEAKAMRRDNATTVFIGGLIIAAFVSIPIVNLATPLFGMAF FT MVHLHKRLSGSRPEVLAPDQRSMLR" FT misc_feature complement(order(25490..25555,25661..25726,25874..25939, FT 26024..26080)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(26000..26140) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.925) with cleavage site probability FT 0.821 atresidue 47" FT CDS complement(26228..28060) FT /codon_start=1 FT /transl_table=11 FT /gene="aceK" FT /locus_tag="RPA0347" FT /product="putative isocitrate dehydrogenase FT kinase/phosphatase" FT /EC_number="2.7.1.116" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCX0" FT /db_xref="InterPro:IPR010452" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCX0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25791.1" FT /translation="MTATASHTRARPLGASEIEHATRIAEPDFDLLDALYRTDDPDDQA FT RLLARVVLSAFDNYYAVSRRIPALAQAAFEARDWPVTVRLSKIRIGLYTACIDQLVPLL FT KAGLPELTTDEQLWPTAEAELLAAIEGRYEADFAFAFWQSLRRKLVSDEWRPVSYDAGS FT TARRTTSPAAVLKTTATTLPITAEVIAGILDEAGFRVPWRDRDGDAALAAQAIETALEP FT LSPRPGEPVKIEIADSGFLRNRGACLVGRIKLRDRGDMPMRNLPLLIALLNEKDGLVVD FT AVLTDSDELQYAFSSTLANYHATNPRYHELARLLYELMPKRPLGTQYSCIGFHHLGKVA FT VMSEILAEHRKTKEKLATAPGFKGTVAIAFTMPSSAYVLKIIRDHPTDDYKFDYFDGLD FT EVLRKYNLVHEIDRAGSMLDNIIYSNVKLDRAMFAPELLDELLEAGIGTVTLDRGALVF FT RHLIVQIKLTPLPLYLANASAAESRAAVINLGDCIKNNAAADIFNKDLDGRNYGVSRIR FT KVYLFDYDAVEPLTSVTVSRDGAAPGEFDNGMVFRPQEMLEGLRIDDPGLRRAFRDAHP FT ELMQADYWEGMQQALRDGKVPKVMNYPASRRLRR" FT CDS complement(28384..29307) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0348" FT /product="possible hydrolase" FT /function="InterPro IPR000379 COGs COG0596" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCW9" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:Q6NCW9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25792.1" FT /translation="MLAQGQRFEGLLCGDDSSRCEVVEMAKLTQFLISGACALLITATS FT AIADPIAPAGKAIGQDGGGHTIYQVDANGISIGYKLIGQGAPMVMIMGLGGTADNWPPQ FT VIEALSKNHQLILMDNRGMGHTTANDTPFSYPLFAADVIGLLDALGIKRSDVLGYSMGS FT TITQQLLLQYPDRFNKALIHATSTDGSNVAKALHGRVPTDPIVARQVEATTHWKTPLDK FT LPSIDNQVMLVVGTADNVVGTESSKTIASAIPGAWLVQFKGATHHLMYETPEGFSAAAL FT TFFETNETVTPKIEPNASVAPPPTQP" FT CDS 29456..30628 FT /codon_start=1 FT /transl_table=11 FT /gene="dcm" FT /locus_tag="RPA0349" FT /product="possible site-specific DNA-methyltransferase" FT /function="InterPro IPR001525 COGs COG0270" FT /db_xref="GOA:Q6NCW8" FT /db_xref="InterPro:IPR001525" FT /db_xref="UniProtKB/TrEMBL:Q6NCW8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25793.1" FT /translation="MKVAGLFAGVGGLELGLHRAGHDTLVFSEIWDPAGAVLERRFGGV FT PNVGDVASLKSLPADVDLMTAGFPCQDLSQAGKTAGIRGRKSGLVSHVFRLIDRSRPKW FT VLLENVSFMLRLDAGSAMTRLVSEFEQRGYRWAYRVVNSLSFLPHRRARVFFLASLEGD FT PADVLLVDDAEPAEPQTNLRSHAHGFYWTEGTRGLGWGPDCIPTLKNGSTIGIPSPPAI FT LLTNGEIVTPDIRDAERLQGLPADWTKPAAQVTRASFRWSLVGNAVSTPVAAWIGKRLV FT KPGQFDPARDGAAVVKGNWPKAARSDGEVRREVMISEFPKWAKRESLQDFLRHQPNLLS FT VRATAGFLSRIEKSSLRFVPGFKDKVRAHLEHVRAIDSFVEPSRLLVAAE" FT CDS 30625..31041 FT /codon_start=1 FT /transl_table=11 FT /gene="vsr" FT /locus_tag="RPA0350" FT /product="putative patch repair protein" FT /EC_number="3.1.-.-" FT /db_xref="GOA:Q6NCW7" FT /db_xref="InterPro:IPR004603" FT /db_xref="InterPro:IPR011335" FT /db_xref="UniProtKB/TrEMBL:Q6NCW7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25794.1" FT /translation="MTSPGFEKPTDPARSALMRRVRQTGTKAEDEVAAILRQSGLRFRR FT NVKSLPGSPDFANKTNQWAIFVHGCFWHRHEGCPRTTTPTRNRDFWLAKFAANVNRDTI FT KARLLRAMGFKVLTIWECETRNPSNVRRRLQRLR" FT CDS 31046..31867 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0351" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCW6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25795.1" FT /translation="MAKNKKIARKFATDQANLLENSIRRELDWAGDRSVVEKGSATDKK FT NYAEGLSRALSQRFADALRKSFDGILPDVDGFGQESKARTGKGLKKLDVNYSTVELGLG FT LGVSIKTINFRDAKTKRYTKNYTRVDNELRAEAADYHERQPYAVLCAVVFIPLDACDDG FT GSAPSSFGQAVQIFRYRAGRERPVDDATLFERILVGLYDAGSPCFGTTGFFDVMDAPPR FT TGRPSALKTFEQAIDKIVEAYDARNKSAFKWAEGETEILAAPEAEDDEDET" FT CDS complement(31874..33685) FT /codon_start=1 FT /transl_table=11 FT /gene="lepA" FT /locus_tag="RPA0352" FT /product="possible GTP-binding protein LepA" FT /function="InterPro FT IPR000640:IPR000795:IPR001687:IPR004161:IPR005225:IPR006297 FT COGs COG0481" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P60793" FT /db_xref="InterPro:IPR000640" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006297" FT /db_xref="InterPro:IPR009022" FT /db_xref="InterPro:IPR013842" FT /db_xref="UniProtKB/Swiss-Prot:P60793" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25796.1" FT /translation="MTTAPIDNIRNFSIVAHIDHGKSTLADRLIQITGGMSDREMAGKE FT QVLDSMDIERERGITIKAQTVRLKYRAHDGKDYIFNLMDTPGHVDFAYEVSRSLAACEG FT SLLVVDASQGVEAQTLANVYHALDAGHEIVPVLNKVDLPAAEPEKIKQQIEDVIGLDAS FT DAVMISAKTGLGVPDVLEAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLVRVVDG FT VLKKGQRIRMMGTGAAYDVERVGYFTPKMVNVEELGPGEVGFITAAIKEVADTRVGDTI FT TDDKKPVTDMLPGFKPAIPVVFCGLFPVDADDFETLRAAMGKLRLNDASFSFEMETSAA FT LGFGFRCGFLGLLHLEIIQERLSREFDLDLIATAPSVIYKMKLTDGTEMEIHNPVDMPD FT VVKIAEIEEPWIEATILTPDEYLGSVLKLCQDRRGNQKELTYVGARAMVKYDLPLNEVV FT FDFYDRLKSVSKGYASFDYHLTDYKPADLVKMQILVNAEPVDALSMLVHRTRAEGRGRA FT MVEKMKELIPPHMFQIPIQAAIGGKVIARETVRALRKDVTAKCYGGDITRKRKLLEKQK FT EGKKKMRQFGKVDIPQEAFIAALKVDS" FT CDS 33791..35368 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0353" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCW5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25797.1" FT /translation="MMSAAPRLQPRARMSPRSTPRRPFAPLTRWLDALLDPRRQELTVI FT WTLLAYMAVWTAYRIIATWPRDLHADETELYGWSRHLALGTDKHPPFSAWVARAWFTLV FT PPSDLSVHLLATANIALTLYIAWRTMRRYMDAEKSLFGLALLTLIPFFNFIALKYNANA FT VLLPLWALTIHCFLRALESRAALWGALAGVFAGASMLGKYWSIVLVVALGLAALIDPRR FT GRFFASPAPWLMILCGGLVLGPHVWWLADHGFPTFAYAAAHESADLADNLRDTLTYLPG FT AVAYAAVALITAAVVLRPSRAALADIAWPAGSERRTILLIQLLLIVAPMPVALATGIRI FT VPLWAMPAYTLLPIVLLASPLIAVGRDAVRRGLIVASAVSLGSLALSPVVALVIHLSDP FT PGPFEYASLLADHVEREWRRNIDEPVPLVAGETVLAENTAFYLRTDTLGFETADLAALK FT QRAAARGAVLVCPADDKGCIATAEQIIAGQPQILRGKVWLSRPLFGQPGGRVSDVFFLV FT LPTERSAK" FT misc_feature order(33914..33973,34115..34171,34208..34261,34376..34444, FT 34463..34531,34613..34681,34742..34804,34817..34885, FT 34904..34972) FT /note="9 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(35389..35721) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0354" FT /product="PTS system phosphocarrier protein HPr, nitrogen FT regulation" FT /function="InterPro IPR000032:IPR001020 COGs COG1925" FT /db_xref="GOA:Q6NCW4" FT /db_xref="HSSP:1KKL" FT /db_xref="InterPro:IPR000032" FT /db_xref="InterPro:IPR001020" FT /db_xref="InterPro:IPR005698" FT /db_xref="UniProtKB/TrEMBL:Q6NCW4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25798.1" FT /translation="MTIDAPQPGSGPDQASGASGDKISREIPVTNKRGLHARASAKFVQ FT MAERFNAEVWVTRNGETVGGTSIMGLMMLAAGIGTTVTVSASGPEARQALDAITELMGS FT KFGEEE" FT CDS complement(35718..36119) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0355" FT /product="PTS system permease (IIAMan), nitrogen regulatory FT IIA protein" FT /function="InterPro IPR004701 COGs COG2893" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCW3" FT /db_xref="InterPro:IPR004701" FT /db_xref="UniProtKB/TrEMBL:Q6NCW3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25799.1" FT /translation="MIGLVLVTHGRLADEFKAALEHVMGPQQQIEAVTIGAEDDADLCR FT SDIIEAVNRVDSGEGVAILTDMFGGTPSNLAISCMSRPKVEVLAGINLPMLVKLAKVRE FT ERSLPEAIALAQEAGRKYVTIASRVLAGK" FT CDS complement(36307..36774) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0356" FT /product="PTS system Hpr Kinase" FT /function="InterPro IPR001687 COGs COG1493" FT /db_xref="GOA:Q6NCW2" FT /db_xref="HSSP:1KKL" FT /db_xref="UniProtKB/TrEMBL:Q6NCW2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25800.1" FT /translation="MTEAAPRTVHASAVKVGDLAVVIRGPSGSGKSRLAWALILAGRAG FT QIPRAELIGDDRVFMEPEQGQLTVRQVPELAGLIEIRGLGLRQTASVAAATVGLVVDLG FT AADASRMPETAALRTEIGGVQLPRVPVAAGYDPLPLVAAALTTTGMAEEEA" FT CDS complement(36771..38516) FT /codon_start=1 FT /transl_table=11 FT /gene="exoS, chvG" FT /locus_tag="RPA0357" FT /product="two component sensor histidine kinase" FT /function="InterPro FT IPR000005:IPR003594:IPR003660:IPR003661:IPR004358:IPR005467 FT COGs COG0642" FT /db_xref="GOA:Q6NCW1" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q6NCW1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25801.1" FT /translation="MRDETPVHGRRWPRPLDWVRRTGQFFFTLSFSSLTRRILSLNLAG FT LMALSASILYLSQFRAGLIDARAQSLLVQAEIIAGAIAASATVETNTITIDPDRLLDLK FT PGESYGPPDEYAVLDFPINPERVAPVLRRLISPTKTRARIYDRDGVLILDSRSLYGRGD FT VMRFELPPPTAEKPGIVERAMIAIRTWFNRGDLPLYRELGPENGNGYQEVAQSLKGQKS FT SMVRINDRGEVIVSVSVPVQRFRAIYGSLMLSTQGDDIDQMVTAERLAILKVFGVAAVV FT MFVLSVLLASTIAGPVRRLADAAERVRRRIRARVEIPDFTRRRDEIGHLSGALRDMTDS FT LYNRIEAIERFAADVSHELKNPLTSLRSAVETLPLAKTDNSRARLLSVIEHDVKRLDRL FT ISDISDASRLDAELQRQDAAQVDLRRLLTTLTLVANETRLGHNALVEVKFDGPAADQFP FT VPGHDSRLGQVISNLLSNAQSFSREGGKVRILCRRRKAEIEIIVEDEGPGIRDDALEKI FT FERFYTDRPHQGFGQNSGLGLSISKQIVEAHGGKIWAENRVGPRGEDGEPTIAGARFIV FT RLPAT" FT misc_feature complement(order(37644..37709,38349..38414)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(38679..39380) FT /codon_start=1 FT /transl_table=11 FT /gene="chvI" FT /locus_tag="RPA0358" FT /product="two-component transcriptional regulator ChvI, FT winged helix family" FT /function="InterPro IPR001789:IPR001867 COGs COG0745" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCW0" FT /db_xref="HSSP:1B00" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q6NCW0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25802.1" FT /translation="MPTIALVDDDRNILTSVSIALEAEGYRIMTYTDGASALDGFRTTP FT PDLAILDIKMPRMDGMETLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIRKPFS FT QRLLVERVKAVLRRSAPKDPAAAPKENDAKALDRGPLRMDPERHTCTWKNEPVTLTVTE FT FLILQALATRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKAVDDEFEMIET FT LYGVGYRFKEI" FT CDS 39614..40348 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0359" FT /product="conserved unknown protein" FT /function="COGs COG0748" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCV9" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR011576" FT /db_xref="InterPro:IPR012349" FT /db_xref="InterPro:IPR014599" FT /db_xref="UniProtKB/TrEMBL:Q6NCV9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25803.1" FT /translation="MQPTPDFSAPKLAKTLLRRRREGALATLMENSGAPYCSLVNLASH FT PDGSPLLLISRLAIHTRNVLADPRVSLMLDERSAGDPLEGARIMLAGRAVPARPDELPL FT WRRRYLAAHPAAEGYIDFADFSLFKIESSGLHLVAGFGRILDLSPDRYLTDLTGAEALL FT EVEASAVEHINADHPDTMKLYATQLLGSGEADWRCTGIDPEGLDLQCERATLRLDFPSR FT VENSAALRDMLKRMADIARKTE" FT CDS 40537..42150 FT /codon_start=1 FT /transl_table=11 FT /gene="pckA" FT /locus_tag="RPA0360" FT /product="phosphoenolpyruvate carboxykinase" FT /function="InterPro IPR001272:IPR001687 COGs COG1866" FT /EC_number="4.1.1.49" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q9ZNH4" FT /db_xref="InterPro:IPR001272" FT /db_xref="InterPro:IPR008210" FT /db_xref="InterPro:IPR013035" FT /db_xref="InterPro:IPR015994" FT /db_xref="UniProtKB/Swiss-Prot:Q9ZNH4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25804.1" FT /translation="MQETGVHNGAYGTDKFGLKNLKGVYWNFGAPQLYEHALKNGEAVL FT SSDGALVADTGVFTGRSPKDKFTVRDATTENTMWWGGNQSITAEQFEALYQDFLKHAEG FT MTLFAQDLYGGADPTFRIKTRVYTELAWHSLFIRTLLRRPERAELENFVPELTLIDLPS FT FRADPKRHGCRSENVVAIDFARKIVLIGGTQYAGEMKKSVFTTLNYYLPEKGVLPMHCS FT ANVGPNGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWGKDGVFNFEGGCYAKCIKLS FT SENEPEIYAASTRFGAVLENVVLGELDRKPDFDDGSKTENTRSAYPLESIPNASLTGRA FT GQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPTPEFSTCFG FT SPFLPRDPSVYGNMLRELIAKHNVDCWLVNTGWTGGIYGTGHRMPIKVTRALLTAALDG FT SLRNVEFRTDPYFGFAVPTALPGVPSEILDPVKTWADKAAFDTTARKLVGMFQKNFAKF FT EAQVDAEVRAAAPDVKMAVE" FT terminator 42179..42199 FT /note="TransTerm prediction, 98+%" FT CDS complement(42238..43113) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0361" FT /product="unknown protein" FT /function="InterPro IPR001687" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCV8" FT /db_xref="InterPro:IPR009097" FT /db_xref="UniProtKB/TrEMBL:Q6NCV8" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25805.1" FT /translation="MRNTLLTSITSVLLAVAVSAGVAAAADGTIDNSALSKSEFRDHAR FT TFGLVYTLPKNVNDVLDSTIRGPLKEKLLNAKLDTEAQMFNIPHVTVVHVHSADPATPE FT KMLAAMPKLPPVLTVKLKTFYTTEAAKGAGRPWWFDLGVVKEGKSFDDMMAFNTTATAA FT LTPLRDGPLPRCTGPVYAAMGDAAKDLVRTVGVSGVNVVKDGKELRSHNPHTTLVYSMA FT KFTPELQAQMNQAAKEFNQILPDGVDATFKTVSIVELGFAGNVLREVYRISLEDGSVTN FT VATGKTASLK" FT misc_feature complement(43033..43098) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(43036..43113) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.966 atresidue 26" FT CDS 43382..44257 FT /codon_start=1 FT /transl_table=11 FT /gene="penP, penA" FT /locus_tag="RPA0362" FT /product="putative class A beta-lactamase precursor FT (penicillinase)" FT /function="InterPro IPR000871:IPR001466:IPR006311 COGs FT COG2367" FT /EC_number="3.5.2.6" FT /db_xref="GOA:Q6NCV7" FT /db_xref="HSSP:1ALQ" FT /db_xref="InterPro:IPR000871" FT /db_xref="InterPro:IPR001466" FT /db_xref="InterPro:IPR006311" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6NCV7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25806.1" FT /translation="MIDRRELMKAATGLAGLGLFGSSAALAADALADMCARLEAGSGGR FT LGVGVLDTASGRMIGHRLDDRFPMCSTFKVLAAGLVLARVDRKQENLDRRVSYAKSDLV FT TYSPATEKHVEDGMTIAELCEAAITLSDNTAANLLLASFGGPAGLTAFARSLGDETTRL FT DRIETELNEALAGDPRDTTSPRAMAQDLRALTLGDALSPASRAQLITWLKANTTGGTRL FT RAGVPPGWTVGDKTGTGGRGTANDIAVLWPLQRAPLIVTVYLTGATVVRDQQNKIIADV FT GAAVAGAMHG" FT sig_peptide 43382..43465 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.997 atresidue 28" FT CDS complement(44272..45399) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0363" FT /product="Endonuclease/Exonuclease/phosphatase family" FT /function="InterPro IPR005135" FT /db_xref="GOA:Q6NCV6" FT /db_xref="InterPro:IPR005135" FT /db_xref="InterPro:IPR016202" FT /db_xref="UniProtKB/TrEMBL:Q6NCV6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25807.1" FT /translation="MDYTGLRRMSDADRGRLITTLTGLRTGLRRLPAKGPGNFLLATWN FT IREFGGTKYRGRIPDALYCIAECISRFDLVAVQEVRQDLVALKQVVRILGRDWDYIYND FT VSLADGGNGERLAFLFNRSRVRFTGLAGELVLPSKSASKLVAQIARTPFICGFQSGWAK FT FNLCTVHIYYGEGKKDDPKRIEEIEKTAKLLADKAKSYINLDDPVDYSPENLVLLGDFN FT IFGREDATFQALTKNRFVIPEPLLRQKGSNVSEDKFYDQIAFFKETRGIECSNAGVFNF FT YQYAFNDPKLYKGVMPASAAFNTWRTFQMSDHLIMWTEFNVDKTDAYLKTLTREQASAP FT KGGTKKAATKKTAKTAVKKTTAKTKAAKKKAAKRS" FT CDS complement(45478..46281) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0364" FT /product="possible permease" FT /function="InterPro IPR002781 COGs COG0730" FT /db_xref="GOA:Q6NCV5" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:Q6NCV5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25808.1" FT /translation="MLPNIPFTDLVTVASGALVGFILALIGGGGSVLAVPLLVYVVGVR FT SPHMAIGTSSIAVAISALANMLSHWAAGNVRWACAVVFSAAGIGGAFAGATIAKQVDGQ FT KLLILFGLLMIVIGALMLRKNRGGGDPAVRLTRDTARAMLPRLIGTGFGVGLLAGFFGI FT GGGFLIVPGLILATGMPLTSAIGTSLVAVVAFGASTATSYALSGLIDWRLAGTFIGGGL FT IGGLIGIGTGKLIGGHDKVLRSVFSAVVIAVGLYVCYRGAMYFLT" FT misc_feature complement(order(45484..45549,45571..45636,45667..45732, FT 45754..45819,45913..45963,45985..46050,46063..46128, FT 46150..46251)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(46177..46281) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.987) with cleavage site probability FT 0.982 atresidue 35" FT CDS 46375..47271 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0365" FT /product="Beta-lactamase-like" FT /function="InterPro IPR001279 COGs COG0491" FT /db_xref="GOA:Q6NCV4" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q6NCV4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25809.1" FT /translation="MTSPSSPAIRAFFDEPTNTVSYLVSDPVSGRAAVIDPVLDYDHGD FT GSVDVRSVETILEAARADGLTIDWVLETHAHADHLSGAPYIKAKTGAQVGIGEHIKDVQ FT KIFRPLFNADDLRTDGSDFDHLFKDGERFMIGGLTVEVMHTPGHTPADIAYRIADAVFV FT GDTLFMPDYGTARADFPGGDAHQLYRSIQKLLALPPQTRLFMCHDYKAPGRDTYAWETT FT VQAERDGNVHLRGGVSEDDFVAMRTKRDATLKAPTLLLPSIQVNIRAGRFPKAQHNGVR FT YLLLPVRPRPGAEAGIS" FT CDS 47370..47732 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0366" FT /product="unknown protein" FT /function="InterPro IPR002198" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6NCV3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25810.1" FT /translation="MADIMSVLASGYSSAALQTPSKTKYVNVDPALYSGTWTGTYSNTK FT KFSITVSDVQGFRAQVKYQSEGTVKYQSVLIKDGAFRIGDTKFALGKNDTASIRNVVTD FT AATGQTQLVTGTAKRS" FT sig_peptide 47370..47417 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.620) with cleavage site probability FT 0.485 atresidue 16" FT terminator complement(47891..47910) FT /note="TransTerm prediction, 98+%" FT CDS complement(47942..48841) FT /codon_start=1 FT /transl_table=11 FT /gene="rpoH" FT /locus_tag="RPA0367" FT /product="RNA polymerase sigma 32 subunit, RpoH, stress FT response sigma factor" FT /function="InterPro IPR000943 COGs COG0568" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCV2" FT /db_xref="InterPro:IPR000943" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR007630" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012759" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q6NCV2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25811.1" FT /translation="MARAATLPILNGESGLARYLAEIRKFPMLEPQQEYMLAKRWREHG FT DRDAAHQLVTSHLRLVAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATY FT AMWWIKASIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLHPDQVKLIA FT TRLGVTEQDVVDMNRRLGGDASLNAPIRDDGEPGEWQDWLVDQSPSQEAVMAEHEELDQ FT RRAALNGAIQVLNPRERRIFEARRLADEPMTLEDLASEFGVSRERVRQIEVRAFEKVQS FT AVKGTIARQEQAALEAAH" FT CDS complement(49063..50286) FT /codon_start=1 FT /transl_table=11 FT /gene="rluD" FT /locus_tag="RPA0368" FT /product="possible pseudouridine synthases" FT /function="InterPro IPR002942:IPR006145:IPR006224:IPR006225 FT COGs COG0564" FT /db_xref="GOA:Q6NCV1" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR006225" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:Q6NCV1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25812.1" FT /translation="MLGRGRRASLGAEKLIADGDQHRGHRQRRGQARDQHHPPHPRKQR FT GLLGGGVGRGGVGHANLCLKAAVLEGAVVGETPENPVNVVVAGDEGSQRLDRVLAARCP FT ELSRSRLKALILDGRVAIAGTPVRDPAYHASPGETITIDVPPPVPAEPAGEAIALDIVY FT EDADIIVLNKPRGLVVHPAAGHETGTLVNALIAHCGASLSGIGGVRRPGIVHRLDKDTT FT GLMVAAKNDKAHQSLSAQFADHGRTGELRRGYLAFVWGVPGRKYGTIDAPIDRHPHARE FT KMAVRQSGREAITHWEVLENFSGKDGKPVAALIACQLETGRTHQIRVHLAHLGHPLLGD FT DVYGPHFKTKANQLAPAGRAALAGLGRQALHAYLLTLEHPSTGEVLTWESPLPADLAHL FT QAALTATE" FT tRNA 50684..50758 FT /gene="tRNA-Glu1" FT /locus_tag="RNA_5" FT /product="tRNA_Glu" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(50851..53454) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0369" FT /product="Aminoacyl-tRNA synthetase, class I:ATP-binding FT region, ATPase-like" FT /function="InterPro IPR001412:IPR003594 COGs COG0326" FT /db_xref="GOA:Q6NCV0" FT /db_xref="HSSP:1TC6" FT /db_xref="InterPro:IPR001404" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR020575" FT /db_xref="UniProtKB/TrEMBL:Q6NCV0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25813.1" FT /translation="MNSQIEKTGLWTISLGSKDSDREIQRKKELLRGVLLRFREHASVV FT TSRITATFPGLTIHDVTHLDSLWEIADLIAGSQYPLNPLEAFVFGGAILLHDAAHCFEA FT YEGGQLAVRKTLIWKDALASEMAAHPDEPRENLEQICDFTAIRLLHARQAEKLGEKEWK FT SENDTTSFFLIEDFDLRSRYGALIGKIAASHNWSIDDVKSRLRSQVNAPGDWPTEWRVD FT PIKLACLLRCADAAHIDNRRAPDFLLALIRRSGISLEHWKAQNWLARVDEDQSDPTKSS FT LLFTSTRSFKPSDAVAWWIAFDAISVLDAEIRASNNLLLSRVQRDSSSPAFKMQRVTGA FT NVPNELSKSIETEGWTPTSARIHVGNLERLVQTLGGQSLYGDGIDEFAVVMRELLQNAR FT DAIAARRSLTPEFSGRISVKVARRSDTHSTIEVRDDGVGMSERTMTTSLLDFGTSFWAS FT DLVKSEFPGLRSSSFKPVGRFGIGFYAVFMIATEVLVASRRYDEGVADIVRLHFPEGLT FT LRPILARGADENHDTMSSTCIRLTVNEPIESLKTRRLAKGSPDHEKQIPLRNYLAAITA FT ALDVSVVLQIEGEPPLSVHQPIDSLDDAEKTLEWLRGITFIDIPGFCNKNDAIQYVLEN FT AYRLRRIEQDGQLVGLAAVIDRPTDDLQCVTTDTIGGLTNHVMRGASTYLGYMESHPGT FT AKRESAKKVATQETLQSWADEQLSILKKNKATVDQLYWAASNLANAELDPIEAISFPVL FT MPDKRYALMPFEEIFRLLQRTPIACLKSRTHDFAETHFGPMLIDNLPTLRPITTGSLIR FT VHLDGAVPKYPFSLIGCLDRLVKKSQRELVYEIKPLPLQTLLGPMDALFIKLRDV" FT CDS complement(53767..56283) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0370" FT /product="putative diguanylate cyclase FT (GGDEF)/phosphodiesterase (EAL) with PAS domains" FT /function="InterPro FT IPR000014:IPR000160:IPR000700:IPR001610:IPR001633 COGs FT COG2200" FT /db_xref="GOA:Q6NCU9" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR000700" FT /db_xref="InterPro:IPR001610" FT /db_xref="InterPro:IPR001633" FT /db_xref="InterPro:IPR013655" FT /db_xref="UniProtKB/TrEMBL:Q6NCU9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25814.1" FT /translation="MAVRGVSLRQPYPREPRGWHQEWSLRRAMRMARAAYWESYSATAT FT DFWMSAEFTSLYDADTPDDSVPLAPARDHDLTDSHAILQAHYAACWTEGRPFAVETKLI FT KPDGRLLDCVVHGEPEFDANGQVQRVFGIVRDATPETSALRQLAVSEQRLADFVSTASD FT WCWESGPDHRLLPYPKSLDGNAALQTVASGGKARWELAYAPDEEGSMALHRDDMEAHRP FT FRDFIYTSIGNDGSRIIISTSGKPIFADDGTFLGYRGTASDITQLAAARTLLDQRTGAL FT EEAHRLGRIGTWTHRLDTGRTVWSPELYQLLGLEPDAFEPTYEGTEPYFLDDDAARLLK FT IQKRVLRTSTTEATDIRILHTDGTPRDLAIICKAEISNGNVIGLIGTAQDVTDRKEAER FT RLEQLAYTDPLTGLANRALYKRKLADLFENPMAEHGQNALYLIDLDRFKEVNDSLGHST FT GDSLLIHVAGVLRQELGPQAFIARIGGDEFAVLTNSPNTSVEATTALADRLIAKLSVPV FT ELAEGEACIGATIGIAILPEHGATAEKASRNADLALYMAKEAGRGRAQLFEPMYAEAVD FT QKLDLGRRLRHAVDSGGLNTHYQPQIDLKTGRVIGFEALLRWSHPERGPISPAEFIPIA FT ETTGLIVDLGHWVLRDACKQMRGWLDAGLPARTISVNVSPAQIWNGDFEKVVATVLADT FT GLPPELLCLELTENLFVDHTKQKVSTTLAALSKLGIQLALDDFGSGYSSLGYLTRLPFN FT RLKIDRSFVDGIATVPEKRKLLGGIIALSHGLGMSVVAEGAELQAEVDLLAAFDCDFVQ FT GYAFSKPVAADQAAVVAAEIERKPGR" FT CDS complement(56484..57668) FT /codon_start=1 FT /transl_table=11 FT /gene="metB" FT /locus_tag="RPA0371" FT /product="putative cystathionine gamma-lyase" FT /function="InterPro IPR000277:IPR006237 COGs COG0626" FT /EC_number="4.4.1.1" FT /db_xref="GOA:Q6NCU8" FT /db_xref="InterPro:IPR000277" FT /db_xref="InterPro:IPR006237" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q6NCU8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25815.1" FT /translation="MTESSHSPGFATTAIHHGYDPLAHHGALNPPLFLTSTYAFASAAE FT GAARFAGEAEGFVYSRVGNPTVAVLESRLAALEGGEAALATASGVGALTALIWTLLKTG FT DGIIADQMLYGCTFGLFEHHLPRFDIEVVFADLTDPANLQAALRPNTRLVFTETPTNPN FT MRLVDIAACAEICRRADARLVVDNTYCTPYLQRPLDLGADLVTHSATKYLGGHGDLLAG FT AVVGPKEIIDQVRFVGVKELNGACISAFDAFLILRGLKTLNLRMDRHSATAVKLAHDLE FT AHPAVAAVYYPGLDSHKQRNLAQRQMRQPGGMIALELRGGLAAGRSFMDKVKLATRAVS FT LGDAETLIQHPASMTHATYDPAERARHGFTDGLIRISVGLEDYEDLKQDLLGAL" FT CDS 57800..58261 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0372" FT /product="transcriptional regulators, AsnC family" FT /function="InterPro IPR000485 COGs COG1522" FT /note="CTG start codon" FT /db_xref="GOA:Q6NCU7" FT /db_xref="InterPro:IPR000485" FT /db_xref="InterPro:IPR011008" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR019887" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:Q6NCU7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25816.1" FT /translation="MDAIDLKILAELQADARIPNIVLAEKVGLSPSPCSRRVKLLEQAG FT VLASYRALVDRAAVGLAVTAFAFIRVERHSRDNAESFIEAVQTMPEVIACHLVSGDSDF FT LLEVVVPDIASYETTVLRGLLALPTVRDIRTSFAMRSYKLSGPLPLPAA" FT CDS complement(58262..58699) FT /codon_start=1 FT /transl_table=11 FT /gene="trxC" FT /locus_tag="RPA0373" FT /product="thioredoxin" FT /function="InterPro IPR005746:IPR006662:IPR006663 COGs FT COG0526" FT /db_xref="GOA:Q6NCU6" FT /db_xref="HSSP:1KEB" FT /db_xref="InterPro:IPR005746" FT /db_xref="InterPro:IPR006662" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013766" FT /db_xref="InterPro:IPR015467" FT /db_xref="InterPro:IPR017936" FT /db_xref="InterPro:IPR017937" FT /db_xref="UniProtKB/TrEMBL:Q6NCU6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25817.1" FT /translation="MSDHLVVCTHCGGVNRLPEQRPALDGKCGKCGHRLFEGHPADVSA FT ELFDKQVSRSSVPVLVDVWAPWCGPCRAMAPAYEQAARELEPNVRLIKLNSDNEQQVAG FT RLGIQGIPTMILFDNGRERARTSGAMPAGEIVRWVRQHLPA" FT CDS complement(58839..59822) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0374" FT /product="putative Zn-containing alcohol dehydrogenase" FT /function="InterPro IPR002085:IPR002328 COGs COG1064" FT /EC_number="1.1.1.1" FT /db_xref="GOA:Q6NCU5" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002328" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR014187" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCU5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25818.1" FT /translation="MDAMVLTAPGTSLQWQSRDTPQPGDGEVLVTVSACGVCRTDLHVV FT DGELPNIRYPIIPGHEIVGRVAAVGAGVTTHQIGDRVGIPWLGHTCGLCRYCRGGMENL FT CDAPLFTGYTRDGGFASHAIADARYAFPLGEAGDDVAIAPLLCAGLIGWRSLAIAGDAE FT RLGIYGFGAAGHIVAQVARWQGRQVYAFTRGGDVAAQDFARSLGAVWAGASEEQPPQPL FT DAAIIYAPVGSLVPAALKAVRKGGRVVCAGIHMSDIPSFPYDLLWEERQLVSVANLTRQ FT DGVDFLEVAQQASIRTETHAFPLREANTVLNKLRAGELLGAAVLVP" FT CDS complement(59896..60117) FT /codon_start=1 FT /transl_table=11 FT /gene="chaB" FT /locus_tag="RPA0375" FT /product="putative cation transport regulator" FT /db_xref="InterPro:IPR009317" FT /db_xref="UniProtKB/TrEMBL:Q6NCU4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25819.1" FT /translation="MPYASTDDLAPGLQVRLPLHAQEIYIAAFNNAFAEYQDRGPEEQE FT ATAHRVAWAAVKKLYRKQGENWVARERS" FT CDS 60347..61069 FT /codon_start=1 FT /transl_table=11 FT /gene="pimt1" FT /locus_tag="RPA0376" FT /product="putative L-isoaspartyl protein carboxyl FT methyltransferase" FT /function="InterPro IPR000051:IPR000682 COGs COG2518" FT /EC_number="2.1.1.77" FT /db_xref="GOA:Q6NCU3" FT /db_xref="InterPro:IPR000682" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCU3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25820.1" FT /translation="MTSPASDLPPLSGRSFAVLRELMVERQIAARGVHDPRVLAAMRKV FT PREAFLPEPMRDLAYEDAPVPIAAEQTMSQPYIVALMVEALLLQGSDNVLEIGAGSGYA FT AAVLGEIAGHVTTVERIATLADAAAAKLAELGYGDVDVHRSDGTRGWPAAAPYDAIVVA FT AGGPQVPESLKAQLKIGGRLVMPVGADQQAQELVRLTRLGEADFKREHLGDVRFVPLLG FT AEGWQQPEPAGRTAREKG" FT CDS 61221..62045 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0377" FT /product="conserved unknown protein" FT /function="InterPro IPR006015 COGs COG0589" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCU2" FT /db_xref="InterPro:IPR006015" FT /db_xref="InterPro:IPR006016" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:Q6NCU2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25821.1" FT /translation="MIKDLIVNLERSKDRQQITDIALGVAELFGAHVAGCCFAYDSLPS FT FTMPDFPSDVLSKMLAASEEAARAAVAQFETACKREGVSVEHHLLETAYGTSGRFPKMA FT RRFDLSVIMQSDAENGDNDILIEQVLFDSGRPLLIVPYIQKTPVKLDRVICCWDGSRAA FT TRAINDAKPFLRRAGQVELVIVRDHKVRDPNELRGIEMANHLARYDVKVDIKTITAPDI FT GVSGTILSHVADTSADLLVMGGYGHSRLREFVLGGVTREMLTSMTVPVLMSH" FT misc_feature 61281..61349 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(62242..63522) FT /codon_start=1 FT /transl_table=11 FT /gene="melA" FT /locus_tag="RPA0378" FT /product="putative alpha-D-galactoside galactohydrolase" FT /function="InterPro IPR001088 COGs COG1486" FT /EC_number="3.2.1.22" FT /db_xref="GOA:Q6NCU1" FT /db_xref="InterPro:IPR001088" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCU1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25822.1" FT /translation="MTNTTKIVFLGASSASFGLSMFRDLFASPVLAGSTLTLVGRNPET FT LGRMTELAKLMNARSGAGLIIEQTTDRRAALDGAGFVINATAIDRNRLWKQDFEVPKKH FT GIRHTLGENGGPGGLFFTLRTLPLVFDFIRDIEELCPTALFLNYSNPESRIILALGRYT FT KVRHIGLCHGIFMGRDAVAYIMQMPREEIEVWGAGLNHFQCLTEIRHRDTGEDLYPRFR FT AAEQSFDPDAWRFTRRLYRAFGYWLTCSDDHLGEYLPYGWEAGEKGYDFDQDERWRGEF FT LTQLNGVLGGTMPIPQWWTEPSGERGAAVIAAMLHNQKRFIESGIVINRGVIPNLPAEL FT AVEVPVTVDAAGVHPVSLGPLPDPIAKLMLMQASVQQLAVEAAVHASKELALQALLIDP FT VVNSAVAAEKILDELWEINRPYIRKCV" FT sig_peptide complement(63424..63522) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.992 atresidue 33" FT CDS 63746..64684 FT /codon_start=1 FT /transl_table=11 FT /gene="pfkB" FT /locus_tag="RPA0379" FT /product="putative 6-phosphofructokinase" FT /function="InterPro IPR002173 COGs COG1105" FT /EC_number="2.7.1.11" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCU0" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="InterPro:IPR017583" FT /db_xref="UniProtKB/TrEMBL:Q6NCU0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25823.1" FT /translation="MVDIVTLTPNPAIDLSTSVERLVPSRKLRCAAQKRDPGGGGINVA FT RVVQRLGGNVEAIFPAGGFTGKLLKLLLDEENVPNRIVEAVAETREDFSVSENATGEQF FT RFVLPGLPLAEHEWRGMLETLAATSPAPKIVIGSGSLPPGVPVDFYAQAAAVAKQLGAK FT FFLDTSGKPLTAALAQGVTLIKPNLREMQELAGRPLGCEKEWVDAARAHITAGQVEIVA FT LSLGHLGALLVTKDEALRSPALPVTPVSTVGAGDSFLAAIAHRLAQGGSVADAFRLGLA FT AGSATLTVHGTQLCGPAEVERLYGQVIIEPI" FT CDS 64800..67112 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0380" FT /product="possible oxidoreductase similar to formate FT dehydrogenase and cbbBc of R. eutropha." FT /function="InterPro IPR006656:IPR006657 COGs COG0243" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCT9" FT /db_xref="InterPro:IPR006656" FT /db_xref="InterPro:IPR006657" FT /db_xref="InterPro:IPR009010" FT /db_xref="InterPro:IPR010046" FT /db_xref="UniProtKB/TrEMBL:Q6NCT9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25824.1" FT /translation="MSQDEARIHDTDIPDTADGTVTYDGPAGGWGSLQGISQIFGREWS FT SPAAIETLMRQNKPKGFMCVSCSWAKPADHHTFEFCENGAKATLWELTSARCTPEFFAE FT HSVTELRGWADYDLEMQGRLTEPMRYDATTDHYVPCSWDEAFQSIGEHLRSLDPKSVIF FT YASGRASLETSYLYALFARLYGNNNLPDSSNMCHETTSVALKKLLGVGVGTVVFDDLAK FT CDAMFFFGQNTGSNSPRFLHPLQEAAKRGVEIITFNPVREKGLESFVNPQNPAEMLTGR FT ETRISSQYHQVKAGGDVAVLIGLCKHVFARDDEARREGRRVLDVDFIEAHTHGLDEFEA FT KVRAISWDEIERESGLSREAIESAGDVYVKAERVIGVYGMGLTQHAHGFLNVAMFVNLL FT LLRGNIGRDGTGISPVRGHSNVQGQRTVGISEKPELVPLDKMAEQFGFDPPRDKGMNTV FT EACHGFLEGKVRAFISLGGNFVRAIPERDAMEAAWTRMQLTVQIATKLNRSHLINGKAA FT YLLPCLGRTEQDIQATGPQAVTMEDTFSCIQGSIGLRKPASEQLKSELAIVAGIAKATL FT PDNPKLKWDDWVGDYGLVRDLIAESYPEMFHDFNDRMFTPGGFYKGNAARERIWKTESG FT KAEFTTPDRLNSIGFDDAPGRYRLMTLRSNDQFNTTIYGMSDRLRGIEGRRDVLLINPD FT EMARAGLSEGQEVWLEGDAGDGVHREAGPLRVTPFRLPDGCLGAYYPEMNSLMPVWHHD FT GPSKTPAAKSVPVRIRT" FT CDS 67384..68646 FT /codon_start=1 FT /transl_table=11 FT /gene="glgC" FT /locus_tag="RPA0381" FT /product="glucose-1-phosphate adenylyltransferase" FT /function="InterPro IPR001687:IPR005835:IPR005836 COGs FT COG0448" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCT8" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR005836" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR011831" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCT8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25825.1" FT /translation="MSQGVTAPFARHAMAYVLAGGRGSRLMELTDWRAKPAVYFGGKSR FT IIDFALSNALNSGIRRIAVATQYKAHSLIRHLQRGWNFFRPERNESFDILPASQRVSEE FT MWYRGTADAVFQNIDIIESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGCLEV FT PRAEATAFGVMHTDTTDRIISFLEKPADPPAMPGKADKSLVSMGIYVFETKFLLDELRR FT DAADPNSSHDFGKDIIPYIVKHGKAVAHHFDKSCRRSSSEAVSYWRDVGTVDAYWAANI FT DLTDIVPELDLYDREWPIWTYGEITPPAKFVHDKEGRRGEAVSSLVSGGCIISGASLRH FT SLLFTGVRVHSFSHVENTVVLPYADIGRSCRLKNVVIDAEVKLPAGLVVGEDPEFDAKR FT FRRTENGICLITRAMIEKLDA" FT CDS 68643..70094 FT /codon_start=1 FT /transl_table=11 FT /gene="glgA1" FT /locus_tag="RPA0382" FT /product="putative glycogen synthase" FT /function="InterPro IPR001296 COGs COG0297" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCT7" FT /db_xref="InterPro:IPR001296" FT /db_xref="InterPro:IPR011835" FT /db_xref="InterPro:IPR013534" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCT7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25826.1" FT /translation="MTTLAVLSVASELFPLIKTGGLADVAGALPAALRANDVAVTSLLP FT GYPAVLGGIEDPQQVHSFNELFGGTARLLAARCGDLDLFVLDAPHLYVRPGNPYVGPDG FT KDWPDNGLRFAALAQVGAALGQGLLPHYKPDVLHAHDWQTGLLPAYLKYSGRPGPKTVF FT TIHNLAFQGRFPYELLGRLGLPERAFGLDGIEYYGGIGYLKAGLQLADRITTVSPTYAA FT EIQGSEAGMGLDGLLRLRADRLSGILNGIDTDVWNPASDALISATYDVESIAARARNKK FT VLQARFGLKPEPGALLYGVISRLSWQKGLDLLLEALPQLIGGGAQLALLGSGDAELEQG FT YAAAARKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVA FT RVGGLADTVVDANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQING FT MTTDVSWKNPAQHYAKLYRDLVAER" FT CDS 70240..71040 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0383" FT /product="probable enoyl CoA-hydratase/isomerase" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.17" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCT6" FT /db_xref="InterPro:IPR001753" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6NCT6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25827.1" FT /translation="MPGQDTVLIERDGPVTIVTINRPERRNAVDGATAKKLYDAFLAFD FT ADESASVAVFTGAGGTFCAGADLKAVAAGDAEKKREIAGHNTLAPMGPSRLRLSKPVIA FT AVEGFAVAGGLELALWADMRVVAEDATFGVFCRRFGVPLIDLGTIRLPRLIGHSQAMDL FT ILTGRPVAADEAHRIGLANRLVPRGEALPRAIELAKQISQFPQTCLRADRLSAFQQWDL FT PEEDAIMNEMRGGLKVIQSGETLSGATRFAQGEGRHGAFGKPAP" FT CDS 71037..71609 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0384" FT /product="conserved unknown protein" FT /db_xref="InterPro:IPR011460" FT /db_xref="UniProtKB/TrEMBL:Q6NCT5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25828.1" FT /translation="MIRRGDQAGTGRSHRGAIAALLCIALSFAASPALADCYDRDRSGH FT QTRFRLAAAEAIDQRTGLIWQRCSVGKSWSDNAGCKGEAGYLGLDQAIAAASAAGNGWR FT VPSGAELESIVDTDCGSPVVDTTVFPDIVPTEEGLAKYWSVTPYGMLDLYWNFDFVDGH FT PDSNSRGIRLAVRLVRAAKPETKPNAN" FT sig_peptide 71037..71144 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.998) with cleavage site probability FT 0.908 atresidue 36" FT misc_feature 71073..71141 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(71625..72350) FT /codon_start=1 FT /transl_table=11 FT /gene="radC" FT /locus_tag="RPA0385" FT /product="possible DNA repair protein RadC" FT /function="InterPro IPR001405 COGs COG2003" FT /db_xref="GOA:Q6NCT4" FT /db_xref="InterPro:IPR001405" FT /db_xref="InterPro:IPR020854" FT /db_xref="UniProtKB/TrEMBL:Q6NCT4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25829.1" FT /translation="MDMPTDNAERLQQPGFAEAPHYHGHRERLRERFREAGSDALSDYE FT LLELVLFRALPRRDVKPIAKELIARFGSFAEAVHAPAERLREVSGVGDAAIIEIGLIAA FT AAARVTKGQVKQRTVLSSWSAVIDYCRTTMAFADKEQFRILFLDKRNQLIADELQQVGT FT VDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADIQMTKSIVAIAEPLGIAVH FT DHIIVGKNGHASLKGLRLI" FT CDS 72685..73785 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0386" FT /product="Ku domain" FT /function="InterPro IPR006164 COGs COG1273" FT /db_xref="GOA:Q6NCT3" FT /db_xref="InterPro:IPR006164" FT /db_xref="InterPro:IPR009187" FT /db_xref="InterPro:IPR016194" FT /db_xref="UniProtKB/TrEMBL:Q6NCT3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25830.1" FT /translation="MAAPPLRSFAPKIVGPGNESESFDFESGSSSSGVCVMAPRANWKG FT FLRLSLVTCPVALYPATSDSDKISFNQINRATGHRIKYLKVDAETGDEVPVDEIMKGYK FT VDTDSYIEITKDELDNLALESTRTIEIDQFVPRAEIDDLYLVRPYYLVPDGKVGHDAYA FT VIRETIRSMDKVALARVVLTNREHVIALEARDNGLVGMLLRYPYEVRDAADYFDDIQDV FT KITKDMLDLAKHIVEQKSGHFQPDLFEDHYETALTELINTKMAGQPLKPQARPRGDNVV FT DLMDALRRSLGDAGKPVPATASKNSGADKPAAAKPAKVKKRKTAPGQKEMLLPISGAGA FT SKAKDETAKTKKPARSPATVKTRKAG" FT CDS complement(74044..74868) FT /codon_start=1 FT /transl_table=11 FT /gene="map" FT /locus_tag="RPA0387" FT /product="putative methionine aminopeptidase" FT /function="InterPro IPR000994:IPR001714:IPR002467 COGs FT COG0024" FT /db_xref="GOA:Q6NCT2" FT /db_xref="HSSP:1O0X" FT /db_xref="InterPro:IPR000994" FT /db_xref="InterPro:IPR001714" FT /db_xref="InterPro:IPR002467" FT /db_xref="UniProtKB/TrEMBL:Q6NCT2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25831.1" FT /translation="MSYVDATETAQRKTGQIKLHGPAGFAGMRKAGQVVARCLDELVDI FT VKPGVPTSRIDDFVREFAFSNGAYPATLMYRGYRYSTCTSLNHVVCHGMPGDRPLKEGD FT IVNVDVTMIVDGWYGDSSRMYPVGPIARKAERLIDVTYESLLRGIAAVKPGATTGDIGH FT AIQSFVEPQQMSVVRDFCGHGLGRLFHDEPNIIHVGSPGQGAVLKPGMFFTIEPMINLG FT KPYVKILSDGWTAVTRDRSLSAQFEHSIGVTEDGCEIFTASPKGLDKPPFQG" FT CDS 75064..76857 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0388" FT /product="possible Na+/H+ antiporter" FT /function="InterPro IPR006153 COGs COG0025" FT /db_xref="GOA:Q6NCT1" FT /db_xref="InterPro:IPR005170" FT /db_xref="InterPro:IPR006153" FT /db_xref="InterPro:IPR018421" FT /db_xref="InterPro:IPR018422" FT /db_xref="UniProtKB/TrEMBL:Q6NCT1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25832.1" FT /translation="MESLDSVSIAILLGSVLVMAGILSSLLALRFGAPLLLVFLVIGIL FT AGESGPGGINFNDLGTTYLVGSVALALILFDGGLKTRFSSIKAVLAPSMGLATVGVLLT FT ALVTAPVARYALDLSWVEALLASAVVASTDAAAVFLLVHAQGLRLRPRVGATLEVESGT FT NDPFAVFLTLMLVELITRGESSILHVLIEFVREAALGAVIGVVGGRVVVMALNRVALPQ FT GLHAPFVTTAALVVFGAAQMSHASGFLAVYLAGMIIGNQPTRAHNSVVAFLDAATWLAQ FT IVMFVLLGLLVSPQRLMGSIGPAVVIALALMLVARPLAVFICLAPFRFNWRERLFIAWV FT GLRGAVAIFLASIPMLVGLSKAYLYFDVAFVVVLISLMLQGWTLAPAARKLLVALPRSD FT RGPRRIELDLPGQLEQQLVGYAVRPKSLYLKRGLIPSWSKPTLVIRDQRILTPEEAEPV FT APGDYVYLLAPPEKAAALDRFFVDMPPSTAPDPHLLGDFIVPGETSLGDLAAAYGISVP FT PGQEALTLADYFDIYLDQAPMVGATLPLDSIVLVARSLGGGRVNVVGLRLPEEEDEAPP FT PTRLAKVRTKLSEVWSLLAGV" FT sig_peptide 75064..75126 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.893) with cleavage site probability FT 0.602 atresidue 21" FT misc_feature order(75079..75147,75166..75225,75238..75306,75325..75393, FT 75421..75489,75655..75723,75766..75834,75868..75936, FT 75964..76032,76066..76134,76147..76215) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(76882..77844) FT /codon_start=1 FT /transl_table=11 FT /gene="mepA" FT /locus_tag="RPA0389" FT /product="putative penicillin-insensitive murein FT endopeptidase A" FT /function="InterPro IPR005073" FT /db_xref="GOA:Q6NCT0" FT /db_xref="InterPro:IPR005073" FT /db_xref="InterPro:IPR009045" FT /db_xref="UniProtKB/TrEMBL:Q6NCT0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25833.1" FT /translation="MRRAILAAPVRLASLLAAMMSLVPAAVAQDKGTLDPKPLPPLANP FT NDPNLAARELFARKLRPSAQQPRPIGFYAKGCMAGGISLPINGPSWQVMRLSRNRAWAL FT PATVRLIERVADKAREQAGWNGILVGDMSQPRGGPMLTGHASHQVGLDADIWLTPMPNR FT QLSRNEREEMSAVMMVRSDRLDIEPSAWTPTHWKVIRAAALEPQVDRIFVNAAIKKALC FT REAKGDRSWLHKVRPMYGHDYHFHIRLRCPAGIEGCEAQAEPPPGEGCDASDFAYWFSD FT AVLHPKPPLKPPPPRHQLTLSELPAECRTVLNAPDKKPD" FT misc_feature complement(77758..77823) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT sig_peptide complement(77758..77844) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.968 atresidue 29" FT CDS 78224..80461 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0390" FT /product="putative diguanylate cyclase FT (GGDEF)/phosphodiesterase (EAL) with PAS domains" FT /function="InterPro IPR000014:IPR000160:IPR001633 COGs FT COG2200" FT /db_xref="GOA:Q6NCS9" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001610" FT /db_xref="InterPro:IPR001633" FT /db_xref="InterPro:IPR013656" FT /db_xref="InterPro:IPR013767" FT /db_xref="UniProtKB/TrEMBL:Q6NCS9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25834.1" FT /translation="MPQVRLKKKKTARIRPPAGSAKPRRSALPAPKTLSKPRRTARPAD FT VAEGERAVAAALEEARRSHARLREAIDILPQGIVFLDAEGRYILWNKRYAEIYKASADQ FT FSPGARIQDTMRIGIARGDYPEAEGREEEWIAERLQRMFNPGSSHEQVLADGRCIQIEE FT RTTSDGGIIGLRVDITELKQREASFRLMFESNPVPMIVCAVNDERILAVNDAAVEHYGY FT SPSEFASLTIRRLQAFETELPWAGNHTHEERTARTWKHVKADGSLIDLAIYSRQLTYNG FT EPAVLLALMDITERKRAEMRLAFMAHHDGLTGLPNRNSLRKRLDELLIQTRRTGEKIAV FT LFVGIDNFKAVNDTLGHAVGDKLLRGVARRLRSTLREEDPLARLNSDEFAVIQTGIKRP FT EDIVLLAKRLLHAIAEPYLLQGHSVVVGASIGIAVAPGDGDDSEKLLMNADMALSRAKK FT DTRGTFSFFEVGMDARAQARRKIETDLRAALQHEVLRPYYQPLVRLADGRITGSEALVR FT WPHPERGMISPAEFIPVAEDTGLINAIGAQILRSACMDAARWPDDVRVAVNLSPLQFRV FT GNLLSVVMDALKQSGLPPRRLELEITETLLLEKSSQVLATLHALRALGVRISMDDFGTG FT YSSLSYLRSFPFDKIKIDQSFVRGLCDNRESQAIVRSIISLGNGLGVTITAEGVESEAE FT LSWLRAEGCQEAQGFLFSQARPNAEITGLLDLQQSGASAGAEFAMGSARVA" FT CDS complement(80476..82233) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0391" FT /product="possible alkaline phosphatase" FT /function="InterPro IPR001952 COGs COG1785" FT /EC_number="3.1.3.1" FT /db_xref="GOA:Q6NCS8" FT /db_xref="HSSP:1AJA" FT /db_xref="InterPro:IPR001952" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:Q6NCS8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25835.1" FT /translation="MMTKHIAATAFASLMFVSAASAQTIYPIDRAEILAGAKFDLKVEF FT AGEVAANTASLTINGADAASVFGKAPELIAQEAGQPRSALLLRDVTLNKPGRYSIEAGD FT GATRRSVSWTVYDTGPRRAKNVILFIGDGLSPAHRVAARLLSKGIQEGRAGGKLAIDDM FT PQMALVSTAGSDSIITDSANAASAYATGHKAAVNAMGVYADRTPDPLDDPKVETLASVA FT KRRLGLSIGIVTNTEVEDATPAAVIAHTRRRAAYDDIVAQFYAAQPDVLMGGGAAYFLP FT KSANGKRKDDIDYLAKFRDAGYAVANNATDLDAASKTAPRKLLGLFAPGNMDGVLDRRF FT LKGGGVTKNPDQPDLTQQVAVALDVLSKNDAGFFLMVESGLIDKYAHALDMERAVYDTI FT MLDNAVRQTRDWAKARGDDTLILVVADHNHPNALVGTVRDDLAEGDDVPLRERIGVYER FT AGFPNYPAPDADGYPERVDVSRRIAIFSASLPDHYETLRPKLDGPNQPTEAGDKPGTFK FT ANDKYKGVPGAVLRIGNLPAMMNASVHSGEDVILTATGPGSDRVRGSLENTDVFRVMAA FT ALGLGAEAK" FT sig_peptide complement(82165..82233) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.946 atresidue 23" FT CDS complement(82475..83812) FT /codon_start=1 FT /transl_table=11 FT /gene="argG" FT /locus_tag="RPA0392" FT /product="argininosuccinate synthase" FT /function="InterPro IPR001518 COGs COG0137" FT /EC_number="6.3.4.5" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCS7" FT /db_xref="HSSP:1KP3" FT /db_xref="InterPro:IPR001518" FT /db_xref="InterPro:IPR018223" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCS7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25836.1" FT /translation="MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANL FT GQPDEADYDAIPRKAMEFGAEKARLVDCRTQLVHEGIAAIQAGAFHVSTGGIAYFNTTP FT LGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPALRIYKPWLDQQFI FT DELGGRAEMSAFMTSHGFAYKMSAEKAYSTDSNLLGATHEAKDLEHLDSGIKIVNPIMG FT VPFWRDDCAVKAEAVTVRFEEGQPVALNGQTFTDPVAMFYEANAIGGRHGLGMSDQIEN FT RIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGMKLGRLLYQGRWFDSQ FT ALMLRETAQRWVARAVTGEVTLELRRGNDYSILNTVSPNLTYAPERLSMEKVEDAPFTP FT ADRIGQLTMRNLDITDTRAKLGLYAKTGLLSSGEGTPIPQLENDKG" FT CDS complement(83905..84684) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0393" FT /product="PA-phosphatase related phosphoesterase" FT /function="InterPro IPR000326" FT /db_xref="GOA:Q6NCS6" FT /db_xref="InterPro:IPR000326" FT /db_xref="UniProtKB/TrEMBL:Q6NCS6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25837.1" FT /translation="MNRNGLLIALALFAGIGLTFGLFPGLDLWLAGLFYDTAAKTFPMR FT SMPDLEFARDFAMWVAWAIAAPSIFALVYKMIRPDRPLVMPGRTVAFLLISITLSAGVL FT TNMTFKSHWGRPRPAAVTEFNGPWQFKAWWDNSGACPKNCSFFSGEGATAYWTFAPAAL FT TPPAVRPYAYAAAFTFGTVTSGLRMAFGGHFFTDVAIAGLVTFLVIWLLYALIYRWAWS FT RTSDEAIDAALTRAFWPLYRLRLKKWRGQDIGPAPAA" FT misc_feature complement(order(84037..84102,84358..84423,84463..84528, FT 84598..84663)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(84619..84684) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.951) with cleavage site probability FT 0.549 atresidue 22" FT CDS complement(84681..85181) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0394" FT /product="conserved hypothetical protein" FT /function="COGs COG0477" FT /db_xref="UniProtKB/TrEMBL:Q6NCS5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25838.1" FT /translation="MALLGRLFVIAIGFLLASIAAGLVVVGMLLFPELSQIADGPIDPD FT ALNIMMGFGFIFVSGFALLPALVVVLITEAFSIRSALAYAIGGGLVGVACYLGLVPFDP FT ATLHFDGIIRRHLEIMTGAGIVGGMVYWLVAGRNAGAWRDPPRRRAPLPPSQPEPPPVN FT RAP" FT misc_feature complement(order(84780..84845,84876..84941,84969..85034, FT 85095..85160)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(85119..85181) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.940) with cleavage site probability FT 0.306 atresidue 21" FT CDS complement(85181..85774) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0395" FT /product="Metal dependent phosphohydrolase" FT /function="InterPro IPR003607:IPR006674 COGs COG1896" FT /db_xref="GOA:Q6NCS4" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="UniProtKB/TrEMBL:Q6NCS4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25839.1" FT /translation="MLPANEIKGVLAFLREAERLKSVIRSGYTSTGRPESTAEHTWRLC FT LMAMLLADGLGDIDVARLLKICIVHDLGEALHGDVPAVAQVEGDDRAARERADIETLTQ FT SLDDKRRAELLGLWHDYETGASPEGRLAKGLDKLETILQHTQGLNPADFDYAFNLDYGA FT RHTAVHPLVSAIRAELDNDTRARMALQQASGAPH" FT CDS complement(85779..87053) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0396" FT /product="Cfr family protein" FT /function="InterPro IPR000345:IPR004383:IPR006638 COGs FT COG0820" FT /db_xref="GOA:Q6NCS3" FT /db_xref="InterPro:IPR004383" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCS3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25840.1" FT /translation="MATGGLCPALHARRGLAGHQPERDAMTPSAASALVEKTPLETYVP FT PAKPSLIGLSRAQLCDRLGDVGVAPPQRKMRAQQLWHWMYVRGARDFSEMTNVSKEMRA FT MLAEHFTVDRPEVVAEQISADGTRKWLLRLPSGGDGQKAHEVECVYIPETDRGTLCVSS FT QVGCTLNCAFCHTGTQRLVRNLTAGEIVGQVMVARDRLGDWIDRETPNGNRLITNIVMM FT GMGEPLYNFDAVRDALLIVSDNEGIGISRRRITLSTSGVVPNIKRTGDEIGVMLAISLH FT AVRDELRDELVPLNRKYPLKELLQACRDYPGASNARRITFEYVMLKGVNDSLDDARKLV FT QLLKGIPAKINLIPFNPWPGSNYECSDWDQIEKFSEYVFNAGYSSPVRTPRGRDILAAC FT GQLKSETEKLSVRERNALRAMAMTD" FT CDS complement(87165..87740) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0397" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6NCS2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25841.1" FT /translation="MIMRRMLIAALAGSLMVAAGNAAVAREAKGKPATTPAAASGGAEP FT TLIGQFGSWGAYTASPGGKKVCFALAKPSSSKTTPPNRPRDPAYAFISTRPSEKVVNEV FT SVMVGYPLKPGSESAIEVAGSSFAMYTQGDGIWIKNAAEEERLVEAMRRGAEITVKGVS FT AKGTASTDVFSLKGLAQALDKVAQACGN" FT sig_peptide complement(87663..87740) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.594 atresidue 26" FT CDS complement(87894..88730) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0398" FT /product="putative 2, 4-dienoyl-CoA reductase (NADPH) FT precursor" FT /function="InterPro IPR002198:IPR002347 COGs COG1028" FT /db_xref="GOA:Q6NCS1" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCS1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25842.1" FT /translation="MFEAGLLANRRILITGGGSGLGAAMAARFAELGASLVLCGRRAEV FT LQETAEQLRSHGSQVDTIVCDVRDPQAVEAMLDEIWRVAPLDVLVNNAAATFIAQTERL FT SARAADAILAPTLHGAMYCTLGAGRRWIDGEHAGVVLSILSTSTITGRAFTVPSAMAKS FT AVLAMTKSLAVEWGPKQIRLVAIAPGAFPTAGATAQLRPDGRSADPADRVPLGRVGRHD FT ELANLASFLISDQAGYITGEMVVQDGGTHLRGSGAEDLLRWSDQQWSAHRAGRAKS" FT sig_peptide complement(88650..88730) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.679) with cleavage site probability FT 0.335 atresidue 27" FT CDS complement(88858..90027) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0399" FT /product="possible transposase" FT /function="InterPro IPR001584 COGs COG1425" FT /db_xref="GOA:Q6NCS0" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6NCS0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25843.1" FT /translation="MPWREVSAVDQRREFVRLAMQEGANRRELCRRFGIHWTTGYKWLE FT RCAAGGDVVDLSRRPHESPRQTSAACEAQVLAVRDAHPAWGARKIASSMKRSGHSAPAV FT STIHEILRRHGRIKSAGGGPPATLRFEMPAPNMLWQMDFKGWVRLGNDVRCHPLTVVDD FT HSRYDLCLQACADQRGETVQDRLQTTFRHYGLPDTIFVDNGSPWSDSSGERWTWFSVWL FT LKLGISVIRSRPYHPQSRGKNERFHRTLDDEVFALRPLRDLAEAQRAFDSWREVYNFER FT PHESLGQLVPADRYQPSRRSLPDRLPAPEYDERDIVRSVPKTKAYVSFKGRLWKVPQAF FT AGERLAIRPLSTDGKYGVFFAAHQVATIDLTGGESVGHVSEHVSTMSPG" FT misc_feature complement(88858..90027) FT /note="IS element" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 90228..91202 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0400" FT /product="possible alcohol dehydrogenases and quinone FT oxidoreductases." FT /function="InterPro IPR002085 COGs COG0604" FT /EC_number="1.6.5.5" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCR9" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCR9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25844.1" FT /translation="MKAILCQQYCGPDDLVYADVPDPVAGPGEAVIAVKAAALNFFDIL FT MIQGKYQIKPPFPFSPGAEVAGVIESVGEGVTDLKVGDRVVASCGHNGAREKIALPAQM FT IVKIPDNLDFDRAAGIIIIYGTALHALEDRASPKPGETLAVLGAAGGTGLAACELGKLM FT GLKVIACASSEEKLAFAKQHGAELTLNYATEDLKEGLKKLTGGKGVDIIFDPVGGTYAE FT AALRSIAWEGRFLVIGFAAGDIPKMPLNLALLKGCDIRGVFWGAWTRLNPEKNRANLEK FT LVKWAAEGKISSHVDRTFPLAQTADALKVLAGRQAMGKVILHP" FT CDS complement(91330..93465) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0401" FT /product="NAD binding site:Amine oxidase" FT /function="InterPro IPR000205:IPR002937 COGs COG1233" FT /db_xref="InterPro:IPR002937" FT /db_xref="UniProtKB/TrEMBL:Q6NCR8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25845.1" FT /translation="MKTFLTVKLVLVPFAVFWALLALHQPSWAIWLGLGLSLAGNAWRA FT YRRELFVLEAGGLALFAALAALSLIAPAVAACNALWLSFAGLAGISALSLAARRPWTSD FT YSRAAHPDNADTPQFFLVNAAITALWAVLFGAIAACRYVDAPSEVITAIVSVGALISIF FT GPKAAIHLILNRMAASRESYRWPTPSFAPFEGQDCDVVVIGSGIGGLTAAALLADAGLK FT VKVFEQHVVAGGYCHTYLRKAHHRGRPVLYRFDAGPHDFSGVQPGGPFATLLQRLGVGN FT RITWDRVTHSFHTQAGAIDVPPDWRDYVRLLGERFPASTAGIKELFDEIKAIFDDMFAT FT AAGRGGVPGMPSSTDELLAFPRNHPHAYRWMNRPFADLVASYVQDPAAVAFINGLAGYI FT GDGSEPPTCARMVPIFGYYFHGGYYPRGGSGVVSDALVAAIEARGGEVKLKTPVARILV FT ENDTAAGVVLGNGATVRARAVISNADLKRTLLDLVPSEALPQDARRWITEAAPANSCFS FT VHLGLDCVPDIRPSVHLHAPMRVGLAMMSKLDPTAAPAGHSILSLIHLVPHAEAKSWFP FT PEPEHDWKSWRRSEAYLRRKQELGDRMIAAAETVIPNLSQHIVYRTDASPVTYARYDWA FT SFGSIYGMSHAGQLKGSKSPLRNLVIVGGGNIGAGIEAVVISGAEAAEALMPGLLASAR FT PVASEPAAATSPELMPA" FT misc_feature complement(order(92944..93009,93049..93114,93160..93225, FT 93247..93312,93373..93438)) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(93376..93465) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.973) with cleavage site probability FT 0.790 atresidue 30" FT CDS 93604..94224 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0402" FT /product="possible transcriptional regulator, TetR family" FT /function="InterPro IPR001647 COGs COG1309" FT /db_xref="GOA:Q6NCR7" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q6NCR7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25846.1" FT /translation="MEKQQEPADDARRAAILQAAFDVFVEKGFEAATTAEIVRRARTSK FT RTLYEFFASKQEILTALIRYGATKMQPSPELPEPQNRQQFLVVLEQFGRIFLSELLHPE FT RTAMYRLAIAEAARGGGSVARELEASGRAPVTQAATRFFEQAAARGIIRREQVATLISV FT FFSVLIGIAPLQALLGESPISADAIAQRSALATQVMARMIEPA" FT misc_feature 94072..94140 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(94243..94617) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0403" FT /product="conserved hypothetical protein" FT /function="COGs COG3339" FT /db_xref="InterPro:IPR010652" FT /db_xref="InterPro:IPR016983" FT /db_xref="UniProtKB/TrEMBL:Q6NCR6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25847.1" FT /translation="MTTDHSVGFEPADRLAHDPEQVRRRFWRKIKSVAVRLPFVEDILA FT AYYCAFDRQTPRHVQIALLGAIAYFILPFDFLPDILPVLGFTDDAAILATALRMVASNI FT TPEHREAARAAMQRGLEDEA" FT CDS complement(94700..95002) FT /codon_start=1 FT /transl_table=11 FT /gene="phhB" FT /locus_tag="RPA0404" FT /product="6-pyruvoyl-tetrahydropterin synthase/dimerization FT cofactor of hepatocyte nuclear factor 1 alpha (TCF1)" FT /function="InterPro IPR001533 COGs COG2154" FT /EC_number="4.2.1.96" FT /db_xref="GOA:P61734" FT /db_xref="InterPro:IPR001533" FT /db_xref="UniProtKB/Swiss-Prot:P61734" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25848.1" FT /translation="MNRLSASERQAALRELPGWLELEEREAIGRSYQFKDFSEAFGFMT FT RVALAAEKADHHPEWRNVYRTVDVVLTTHDAGGVTERDVKLAKAMDAIAERCGAR" FT CDS 95145..96590 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0405" FT /product="conserved hypothetical protein" FT /function="COGs COG2358" FT /db_xref="InterPro:IPR011852" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:Q6NCR4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25849.1" FT /translation="MSSTQRLSRLADGSDTMEAMLQPSLRSPWRRMLLIILATTLSLIG FT IASAGYYFAMRPVTLKIAVGPQAGDDYKLIQALTQVFARERNTVRLRPVVTDGPAASAL FT ALKSGAVDLAVIRGDLPVPKQAQSVAVLHKNVAVLWAPASQQPKGKRKGSKTAGIAGIT FT DLTGKRVGVVGRTEANAGLLTVILQQYGVDPSKVQTLSVPVAEVADAVRTGKVDALLAA FT GPLNSKIIGDAVAATAHTGREPVFLSIESSEALAANHPSYEAASIPAGAFGGAPARPDN FT EVKTVSFSHYIVAREGASDTTIATFTEQLFTARQIVIGEVPLAAKIETPDTDKDAVIPV FT QPGAAAYVDGEEKSFLDRYSDLIWFSLMGLSLMGSAGAWFASFLRKDERTSTASQRERL FT LDMLATARRCSSAEDLDTMQTEADAILRDTLTAYENGAIDSAALTAFSIALEQFHNAVT FT DRKLLLADVSPLPPLRGVRPQAV" FT misc_feature order(95241..95309,96228..96296) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(96594..98039) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0406" FT /product="conserved unknown protein" FT /db_xref="InterPro:IPR005625" FT /db_xref="UniProtKB/TrEMBL:Q6NCR3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25850.1" FT /translation="MSSVVRRAKRWLYLGHRWLGIAGCLLFAMWFISGVVMMYVAFPHY FT DKEERWAALPDLAWQHVALSPDQAMQAAGVTHYPRDLRLVMLDTEPVYRLLDWRGQRTT FT VSAIDGRKIDQVSADQALGIARHHPAAAAPQLIETVDRDQWSVTSRYDSFRPLYLIGLG FT DTAGTELYVASRGGEIVLDTTRRERIWNWLGAIPHWIYFTVLRQDGPLWRQVVLWVSGI FT LMMVAASGIWIGLLRAGLRRRYASGRITPYRGWMAWHHITGLIGGVVVLTWMFSGWLSM FT NPGEAFARRGESRDMLQRYADHDAPTIAAKLPTTPLPGVVEARFAWIGGTPLILLGHRD FT GRQTVADPDDGTAKRLPEETIIAAATRLLPDATMVLRQRLERYDAYWYRHHRQRVLPVL FT RVGFDDPASTWFHLDPATGELLGRSDTSARSYRWLFNAPHSFDFPVLLAYRPAWDLVVI FT LLSLAGLVISVSGVVIGWRRLVR" FT misc_feature complement(order(96618..96683,97203..97268,97332..97397, FT 97914..97979)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(97923..98039) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.867) with cleavage site probability FT 0.757 atresidue 39" FT CDS complement(98044..100320) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0407" FT /product="possible TonB-dependent receptor (outer membrane FT siderophore receptor)" FT /function="InterPro IPR000531:IPR000568 COGs COG1629" FT /db_xref="GOA:Q6NCR2" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR010105" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q6NCR2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25851.1" FT /translation="MTPAVLPLGRNRRLLSSVALVPLLWPVDGLAQTASANPRGLDPIV FT VEGQTVRAAKPRATANAGSSRQRRAAARPVATPAPAPTQPTTTAATAPTFNLGTPSSTG FT SRLGLTPLQTPASVEVIRAETIAERGQHNVIDAVTQNATGFTASPRPGNGGLAFTTRGF FT TGNGTVMSLYDGTRLYVGSGTMTFPFDTWTAQSIEVLRGPASVMYGEGAIGGAINVISK FT KPLDVARNEAEISLDTNMSRRLAVDSGGPINPNVSYRLAAIGNMSDGWVDRDKNSNVAV FT SGSVRVQAADNLAFTLSEDYADRSPSGYFGTPLVNGRLDEALRFQNYNVDDASIRYRDN FT WTQLKTEWDVAEGVSVKNVTYYLSTHRHWKDVESYAYNPLRGNIGRSSYIEIFHDQEQI FT GNRFDTTFKGHVFGLANEFVAGFDVNRIAFTHTNNSPYAGTSSVPAYNFDPGYFLPVSP FT TRPSFHTLTTQYGVFAENRLSLTDQLSLIGGIRSDNPTVQRTDFLSPSNSFEKTYSAPS FT WRVGAVYNPIENLSIYGQYSTAVDPVTNLITMTGVNRDFSLSTGKQVEVGIKQQLAGGR FT AEWTLAAYHIVKNNLLARDPQNPANTNPLQIGQQSSRGIEASAGLKVTETIRLDANVAW FT LRAKYDDFTQVVGGRAVNYAGNVPNNVPQIVSNIWATWAFAPGWSANAGVQLVGDTWAD FT DANTLVRPAYNVVNAGLMWKPDTRQTLALRVYNLFDTVYTTSGNTTMWQLGMPRTAELS FT YNVKF" FT sig_peptide complement(100225..100320) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.835) with cleavage site probability FT 0.505 atresidue 32" FT misc_binding complement(100429..100625) FT /function="cobalamin riboswitch" FT /bound_moiety="adenosylcobalamin" FT CDS 101049..102872 FT /codon_start=1 FT /transl_table=11 FT /gene="bipA" FT /locus_tag="RPA0408" FT /product="conserved GTPase" FT /function="InterPro FT IPR000640:IPR000795:IPR001687:IPR004161:IPR005225:IPR006298 FT COGs COG1217" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCR1" FT /db_xref="InterPro:IPR000640" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006298" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009022" FT /db_xref="UniProtKB/TrEMBL:Q6NCR1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25852.1" FT /translation="MTLRNIAIIAHVDHGKTTLVDKLLQQSGTYRDNQRQVERAMDSND FT LERERGITILAKCTSVVWGDTHINIVDTPGHADFGGEVERILSMVDGVIVLVDAAEGPM FT PQTKFVVGKALKLGLKPIVAINKVDRSDARVTEVVNEVFDLFAALDATDEQLDFPILYG FT SGKNGWMSDKPDGDPSEGMKPLFELVLKHVHPPVVEEGPFRLLGTILEANPYLGRIITG FT RIASGSVKPNQAVKVLSRDGKLVEQGRISKILAFRGLERVPLDIAEAGDIVAIAGLTKG FT TVADTFCDPAVDTPIQAQAIDPPTVSMSFIVNNSPLAGTEGDKVTSRLIRDRLLREAEG FT NVALRVVESADKDAMEVSGRGELQLAILIENMRREGFELSVSRPRVVLTRDENGQLLEP FT VEEVVIDVDEEFSGVVVQKMSERKAEMIEMRPSGGNRLRLVFYAPTRGLIGYQGELMTD FT TKGTAIMNRLFHNYLPYRGEIQGRRNGVLISNDQGEAVAYAMFKLEDRGPMMIEPGWKV FT YKGMIVGEHTRDNDLEINVLKGKQLTNIRTTSKDEAVRLTPPIRMTLEKALAYIEDDEL FT VEITPKSIRLRKRLLDPNERKRAEKSKQAVA" FT CDS 102982..104250 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0409" FT /product="NAD binding site:Amine oxidase" FT /function="InterPro IPR000205:IPR002937 COGs COG1231" FT /db_xref="GOA:Q6NCR0" FT /db_xref="InterPro:IPR002937" FT /db_xref="InterPro:IPR003042" FT /db_xref="UniProtKB/TrEMBL:Q6NCR0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25853.1" FT /translation="MPSSSFPSSVDIAIIGAGASGLGAARTLEGMGLSVIVLEARNRIG FT GRAWTRMVTPEIAFDVGCGWLHSADENSFVGIAKQLGIGIDKTHPPWGEASFGDVFPKR FT DRAAFGKALDAFYERVWRAAKNKTDVAAATLLEPGNRWNPMIDAVSTYVNGAELDRISV FT HDLESYRDTGINWRVREGYGSLIAAYGAPCPVALNCVVEQIDHSERRIKINTSLGTLSA FT SQIIITVPTNLIADEAIRFAPALPGKVEAARHLLLGVDDKVMLKLSDSNGFPADGNLRA FT ATMRSAMGTYHLRPFGQDCIEGFFGGRYARELEDAGEGAFAAQAIDEIADLLGNDIRRK FT LSPLAESRWAHDPFARGAYSHALPGHAGARAVLAAPVDGRLFFAGEATSPQFFSTAHGA FT RDSGERAARQAIDCRSGPGFAAN" FT CDS 104426..104935 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0410" FT /product="GCN5-related N-acetyltransferase" FT /function="InterPro IPR000182 COGs COG0454" FT /db_xref="GOA:Q6NCQ9" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25854.1" FT /translation="MSTTLIEVRAARAADASAVAATHDEAWRSAYQGIIPGAELEKLIN FT RRGPTWWDSAIRKGSRISVLCFGDKIAGYANYGRNRARSLQFEGEIYELYLRPEFQGLG FT FGRRLFAAARRDLVQSGLKSMVIWALSDNEPATEFYRALGGRMVARSSERFGPKSLDKV FT AFAWSN" FT CDS 105012..105548 FT /codon_start=1 FT /transl_table=11 FT /gene="ppa" FT /locus_tag="RPA0411" FT /product="inorganic pyrophosphatase" FT /function="InterPro IPR001596 COGs COG0221" FT /EC_number="3.6.1.1" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCQ8" FT /db_xref="InterPro:IPR008162" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25855.1" FT /translation="MRIDAIPVGVNPPYDVNVIIEVPVGGEPIKYEMDKAAGTLVVDRF FT LYTAMHYPGNYGFIPHTLSDDGDPCDVLVANTRGIVPGAVMSVRPVGVLYMSDEAGHDE FT KIIAVPSSKLTQRYDRIKTYSDLPEITLAQFQHFFEHYKDLEPGKWVKVVRWGGADEAH FT KLILEGLDRAKKAKG" FT CDS 105584..107065 FT /codon_start=1 FT /transl_table=11 FT /gene="CPS1, CPS" FT /locus_tag="RPA0412" FT /product="putative Gly-X carboxypeptidase YSCS precursor" FT /function="InterPro IPR001261:IPR002933 COGs COG0624" FT /EC_number="3.4.17.4" FT /db_xref="GOA:Q6NCQ7" FT /db_xref="InterPro:IPR001261" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25856.1" FT /translation="MRRLLRWIRNLVAIALLAVAVLAGVLAYNTFRHGSRQITVAAVPP FT IAIDEQGAAQRLSQSIRFQTISNFLNPEQDAEALRGLRAHIESSFPAFHAAAKREIVGG FT HSLLYTWEGSDPQAKPIGLLAHQDVVPIAPKTEQDWQQPPFSGAIEGGYVWGRGSWDDK FT GNLYAMLEAAELMAKQGFRPKRTIYFAFGHDEEVSGLRGAAKIAELLASRNVRLDFVLD FT EGLLITDGVMKGLDKPAALIGVSEKGYATLVLTARGTPGHSSMPPRDTTIGMLAAALTH FT LEDNRLPMRIRGSVAEMFDTLAPEMSGFSRVALSNLWLFRPLLLREFAKSGTTAAMVQT FT TTALTVFNAGDKDNVLPGVAEASVNFRLLPGDTQTSVTDHVRSVVANDRIGIQGFDGNF FT DPPPVTGTSSVSYQALNRTIREVFPDVVVAPGLMIAATDSRHYAQVADNIFRFSPVRAT FT PEDLKRFHGTNERISIKNYADMIRFYVRLMQSTAG" FT sig_peptide 105584..105667 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.728 atresidue 28" FT misc_feature 105602..105670 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(107255..108142) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0413" FT /product="putative methylenetetrahydrofolate dehydrogenase" FT /function="InterPro IPR000672:IPR001687 COGs COG0190" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCQ6" FT /db_xref="HSSP:1A4I" FT /db_xref="InterPro:IPR000672" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020630" FT /db_xref="InterPro:IPR020631" FT /db_xref="InterPro:IPR020867" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCQ6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25857.1" FT /translation="MTARIIDGKTISAEVRARVAAEVTRLKTDHGITPGLAVVLVGNDP FT ASEVYVRSKHKQTQEAGMASFEHRLPADVPQAELMALIAKLNADPAVHGILVQLPLPKG FT LDSNAVIDAIDPAKDVDGLNPTNAGRLASGLFALTPCTPLGSIIMAKTVHASLEGMNAL FT VIGRSNLVGKPLVQLLLNENATVTIAHSRTRDLPALCRQADLVFAAVGKAEMVKGDWIK FT PGATVIDVGINRTPGKDGGKDKLLGDVAFAEAKEVAGAITPVPGGVGLMTVACLLVNTV FT RAACAIHGLPKPAV" FT CDS complement(108249..108587) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0414" FT /product="DUF167" FT /function="InterPro IPR003746 COGs COG1872" FT /db_xref="InterPro:IPR003746" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25858.1" FT /translation="MSAGMAEAWRYSAQGVAVAVRVTPRGGRDDIDGLETLSDGRPVVK FT VRVRAIADGGEANRAVTELLAKAVGVPKRNVRLLSGATSRQKQIAIDGDPKQLGEALRR FT LVAAKPAE" FT CDS complement(108601..109098) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0415" FT /product="Family of unknown function YGGT" FT /function="InterPro IPR003425 COGs COG0762" FT /db_xref="GOA:Q6NCQ4" FT /db_xref="InterPro:IPR003425" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25859.1" FT /translation="MAPCAGGTCRTASERRHLQCRSRPSQGRQGGSKSAGRGFIAAEFP FT CLDGGEPISTARAFRDRNREFSPAMRAILDIVLIILDLYIWLLIASAILSWLIAFNVVN FT TRNQFVGAVSEFLYRITEPLLAPIRNLLPSLGGLDISPIILILLIMFLQRVITYYIYPA FT VF" FT misc_feature complement(order(108613..108678,108805..108870)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT tRNA 109091..109166 FT /gene="tRNA-Ala1" FT /locus_tag="RNA_6" FT /product="tRNA_Ala" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(109367..110179) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0416" FT /product="putative enoyl-CoA hydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.17" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCQ3" FT /db_xref="InterPro:IPR001753" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25860.1" FT /translation="MSYQDILYEVADKIATITLNRPDRMNAWTPVMEREVRTAMQQAAA FT DSEVRVIVLTGAGRGFCAGADMQVLQTIDPSDVRRATDLPPFDMNRRPDWQTRYAFYPS FT IPKPIIGMLNGATAGIGLVHALYCDVRFAADSAVFTTAFARRGLIAEHGISWMLPQIVG FT HANALDLLLSARRVAADEALRMGLVNRLYPADQLREQTYAYARDLADNVAPASMRVIKR FT QLYDVPFQTLAEATIEANREMAISLASADFKEGVASFVEKRPPRFSSV" FT CDS complement(110261..110761) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0417" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25861.1" FT /translation="MTSEEFARLLESLTRAVESGDGARFAGHFTEDATYHDYIYGPHIG FT RAEIATMMQDLFHRDAADYRWEMFDPVCNGDLGYAWSLSSFTSTVPDFRGERVVIDGMS FT RFILRGELIAEYRESVNGGVAMAQLGVAPERMAKVFRKWSGWLQHRPETQDYLARPKGT FT RRT" FT CDS complement(110865..111662) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0418" FT /product="Glutamine amidotransferase class-I" FT /function="InterPro IPR000991 COGs COG0518" FT /db_xref="GOA:Q6NCQ1" FT /db_xref="InterPro:IPR000991" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25862.1" FT /translation="MLVRLTDCGRVASPALQPAKTNDPRPVLIVLHQETSTPGRVGNAL FT RALGHPLDIRRPRFGDPLPHSLDDHAGAVIFGGPMSANDPDDYIRREIDWIAVPLKERR FT PFLGICLGAQMLAKQLGARVAPHQHGRAEVGYYDIRPTAAGRAMCAHWPRQVYHWHVEG FT FELPAGADLLAEGGDFPVQAIRNDTAYGFQFHPDVTSAMMHRWTTEGHDRLSLPGARPR FT REHFADRAVHDLAERIWLEHFLDHWLSRTPLGEPVAALREAAE" FT CDS complement(111783..112562) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0419" FT /product="possible short chain dehydrogenase/reductase FT family member" FT /function="InterPro IPR002198:IPR002347 COGs COG0300" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCQ0" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCQ0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25863.1" FT /translation="MTERVTLITGASAGIGVELARIFADNAHRVALVARRGDRLESLAA FT EIRAKGGPEPIVIACDLGKPDAAEQIIAALAAAGVEVEYLVNNAGYGLFGRAMELDRES FT QLGIIDVNNRALTDLTLRFADSIARLRGGILNVASIAGFLPGPGMAVYYASKAYVLSFS FT EAMHQELGPKGVRVTALCPGPVQTEFQNRAGFEPGFDSAVLNVTPAEVARQAYQGLMNN FT KRIVLPGLGVKIVPFLLRFFPRGFIAAAVSGFQLRRR" FT misc_feature complement(order(111837..111887,112101..112166)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(112745..113365) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0420" FT /product="conserved hypothetical protein" FT /function="InterPro IPR001899" FT /db_xref="InterPro:IPR010755" FT /db_xref="UniProtKB/TrEMBL:Q6NCP9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25864.1" FT /translation="MELPGTGAGLRAFHFHAIERRAVAPIERRETMLDKLRQFITDVVA FT PSAPDELTLDDGGYRLAATALLIHVISIDGDPSEVEKQKLHSLLEQRFGLDAATATRLI FT ASATLVEGEAVDLYHFTSVIMRSVNEQGRLRIVEMMWELVYADGTVTEFEENVVWRAAD FT LLAVSTRDRVTLRQKVAAAAPVAPGAAQGGTTMGSVAEVDPAN" FT CDS complement(113409..114794) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0421" FT /product="possible cytochrome P450 hydroxylase superfamily FT proteins" FT /function="InterPro IPR001128 COGs COG2124" FT /db_xref="GOA:Q6NCP8" FT /db_xref="InterPro:IPR001128" FT /db_xref="InterPro:IPR002401" FT /db_xref="InterPro:IPR017972" FT /db_xref="InterPro:IPR017973" FT /db_xref="UniProtKB/TrEMBL:Q6NCP8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25865.1" FT /translation="MSIAAIDDRPASRAPLIPPTPPRAPENLSALGRLAAIRHNAIASW FT GDRAYQDDVVRGRFFAHSSYILNTPDAIRHVLVDNTDNYRRTATGIRVLRPMLGEGLLL FT AEGRAWKHQRRTLAPAFTPRAVATLVPHMASATDEVVEGLRRKTGVPLDLRETMQHLAL FT EIAGRTMFSFEMGTHGQALRGFVIDYGTRLASPRFLDLLLPLGWPTPQDVSRALFRRRW FT TRFIGELIAARRAAGKAEGAPPRDLFELMLAARDPETGEAFSDAQLGDQVATMILAGHE FT TTATALFWALYLLALDPDAQERLANEVRRVGFGGTEIERLPFTRAVLDETLRLYPPAFL FT IVREAAGPDRVAGFAVRKHDVMLIAPWLLHRHDKLWSDPNAFVPERFLPGVPSPDRFAY FT LPFGVGPRVCIGAHFALVEATLALAKIVGTFRIELIDTEPVIPIGVVTTQPDRSPLFRL FT TPR" FT CDS complement(114915..115916) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0422" FT /product="possible dehydrogenase" FT /function="InterPro IPR006139:IPR006140 COGs COG1052" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCP7" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCP7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25866.1" FT /translation="MSVKKKPLVVVTRKLPDSIETRMRELFDARLNLDDVPMTAEQLAE FT AARTADVLVPTVTDEITAAMVNQPDCKLRLIAHFGNGIDNLDVAAAHARGITVTNTPKV FT LTEDTADMTMALILAVPRRMIEGAALLTDGGEWPGWSPTWMLGRRLGGKRLGIIGMGRI FT GQAVARRARAFGLQIHYHNRKPVAPRIADELGATYWDSLDQMLARMDIISVNCPHTPAT FT FHLLSARRLKLVRKDAFIVNTARGEVIDEETLTKLIEAGDIAGAGLDVYEHEPAVNPKL FT VRLAKHGKVVLLPHMGSATIEGRVEMGEKVIINIRTFLDNHKPPDRVLPGML" FT CDS 116151..116675 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0423" FT /product="conserved hypothetical protein" FT /function="COGs COG1154" FT /db_xref="InterPro:IPR010466" FT /db_xref="UniProtKB/TrEMBL:Q6NCP6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25867.1" FT /translation="MTMKYLMAVTAFAGAMICAATFAHAGKESPLSASGLPVPRYVSLK FT SDHVNVRVGPTKDNDVAWVYTRAGLPVEVTAEFENWRRVRDSEGAEGWVYHSLLSGRRT FT AVVTMKDKDGLAPLYESASSGSAVVARLQAGVVAQVKRCDMKWCRIVGSGFDGWIEKLQ FT LWGVYADEQVN" FT sig_peptide 116151..116228 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.928 atresidue 26" FT misc_feature 116163..116222 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT terminator complement(116722..116746) FT /note="TransTerm prediction, 98+%" FT CDS complement(116783..117274) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0424" FT /product="transcriptional regulator, FUR family; probable FT iron response regulator IRR" FT /function="InterPro IPR002481 COGs COG0735" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCP5" FT /db_xref="InterPro:IPR002481" FT /db_xref="UniProtKB/TrEMBL:Q6NCP5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25868.1" FT /translation="MDIGERVAFLQEEPVHEAHSHAEPRLNGCPWHDVNEMLQSVGLRP FT TRQRMALGWLLFGKGDRHLTAEMLYEEASQAKVPVSLATVYNTLNQLTDVGLLRQVSVD FT GTKTYFDTNVSAHQHFYLENNHELIDIPNAELELKATPDVPEGYEIARVDVVVRLRKKG FT " FT CDS 117533..118060 FT /codon_start=1 FT /transl_table=11 FT /gene="fabA" FT /locus_tag="RPA0425" FT /product="3-hydroxydecanoyl-acyl carrier protein dehydrase" FT /function="COGs COG0764" FT /EC_number="4.2.1.60" FT /db_xref="GOA:P61450" FT /db_xref="InterPro:IPR000794" FT /db_xref="InterPro:IPR010083" FT /db_xref="InterPro:IPR013114" FT /db_xref="UniProtKB/Swiss-Prot:P61450" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25869.1" FT /translation="MRDRRSSYEYEDLLACGRGELFGAGNAQLPLPPMLMFDRITTITE FT DGGEFGKGHVRAELDVNPDLWFFACHFKNDPVMPGCLGLDAMWQMVGFFLGWVGGEGPG FT RALGLGELKFTGQVLPNISKVVYNVDIKRVMRSKLWLGIADGWLSADDEIIYRAKDLKV FT GLFKQTAQPVAG" FT CDS 118122..119348 FT /codon_start=1 FT /transl_table=11 FT /gene="fabB" FT /locus_tag="RPA0426" FT /product="beta-ketoacyl-ACP synthase I" FT /function="InterPro IPR000794 COGs COG0304" FT /EC_number="2.3.1.41" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCP4" FT /db_xref="HSSP:1KAS" FT /db_xref="InterPro:IPR000794" FT /db_xref="InterPro:IPR014030" FT /db_xref="InterPro:IPR014031" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR018201" FT /db_xref="UniProtKB/TrEMBL:Q6NCP4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25870.1" FT /translation="MRRVVVTGMGIVSSIGNNTQEVLASLHDAKSGISRAEKHAELGFR FT SQVQGAPTLNPADVVDRRAMRFLGEGAAWNHVAMEQAIADSGLEESEISNIRTGIVMGS FT GGPSARTIVEAADITRTKGPKRVGPFAVPKAMSSTASATLATWFKIKGVNYSISSACAT FT SNHCIGNAYELIQWGKQDVMFAGGCEELDWSLSVLFDAMGAMSSKYNDTPATASRPYDV FT NRDGFVIAGGAGVLVLEELEHAKARGAKIYGEIIGYGATSDGYDMVAPSGEGAERCMKM FT ALSTTGGIKIDYINPHATSTPAGDPPEMNAIRAVFGIGDKCPPISATKALTGHSLGATG FT VQEAIYSLLMMQNGFICESAHITELDPAFADMPIVRKRVDNAKLGAVLSNSFGFGGTNA FT TLVFKRLEA" FT CDS 119524..120333 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0427" FT /product="enoyl-acyl carrier protein reductase" FT /function="InterPro IPR002198 COGs COG0623" FT /EC_number="1.1.1.-" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCP3" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR014358" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCP3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25871.1" FT /translation="MQGLMQGKRGLIMGVANDHSIAWGMAKTLAAHGAELAFTYQGEAL FT ARRVKPLAQSLNSDLVLPCDVEDIASVDAVFDTLKDKWGKLDFVIHAIGFSDKNELRGQ FT YIDTSRANFSRTMVISCFSFTEVAKRAAALMPDGGAMITLTFGASERAMPNYNVMGLAK FT AALEASVRYLACDLGPKGIRVNAVSAGPVRTLAGAGIGDSRAMFGFMEKHSPLGRGVTL FT EELGGSALYLLSDLSGGVTGETHYVDSGYNIVLMPKPEALKADADKA" FT CDS complement(120506..121024) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0428" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCP2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25872.1" FT /translation="MLLRLPVITAAMLAVIGLAHADDDELAIQGIGISRDVDCQGKNVG FT VYGAENEIALTGQCRTITVHGSKHKVSFEQGQTLSVSGSDNTVNGGRAKDVVVSVAKNT FT VTTTLEAGDEPGTLKATGANNKITLVLSGPSRLDVGGVEQVVEWSKADGAPNPEVRSSG FT ALNSIKRKK" FT sig_peptide complement(120959..121024) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.999 atresidue 22" FT terminator complement(121203..121222) FT /note="TransTerm prediction, 98+%" FT CDS complement(121252..123462) FT /codon_start=1 FT /transl_table=11 FT /gene="katG" FT /locus_tag="RPA0429" FT /product="catalase/peroxidase" FT /function="InterPro IPR000763:IPR001687:IPR002016 COGs FT COG0376" FT /EC_number="1.11.1.6" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCP1" FT /db_xref="HSSP:1SJ2" FT /db_xref="InterPro:IPR000763" FT /db_xref="InterPro:IPR002016" FT /db_xref="InterPro:IPR010255" FT /db_xref="InterPro:IPR019793" FT /db_xref="InterPro:IPR019794" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCP1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25873.1" FT /translation="MDAKTDDKGAGKCPFSGGSHGHRNRDWWPDQLDISVLHNNSKKSD FT PMGAAFNYAEEFKKLDLEAVKKDLHALMTDSQEWWPADFGHYGGLFVRMAWHSAGTYRI FT TDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNVALE FT SMGFKTFGFAGGRADVWEPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPE FT GPNGNPDPVAAAKDIRETFARMAMDDEETVALIAGGHTFGKTHGAGDPSLIGPAPEGGL FT LEEQGLGWTSKYGTGFGADAITGGPEVIWTQTPTQWSNHFFENLFGFEWELDKSPAGAK FT QWKAKGAEATVPDPFDPAKKRVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARA FT WFKLTHRDMGPRERYLGPEVPKEELIWQDPIPAVNHELVGEADIEALKAKILASGLSVA FT QLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAQVLGKLEAIQGEFNG FT AQKDGKKVSLADLIVLGGAAAIEKAAKDAGTAVKVPFTPGRMDASAEQTDVESFKVLEP FT RADGFRNYINTKRHQFMHPEEALVDKAQLLTLTGPELTVLVGGLRVLGANYAHSTHGVL FT TERPEKLTNDFFVNLLDMGTKWTKANGEVEIYEGRDRKNGELKWTGTRVDLVFGSHSQL FT RAFAEVYACSDAQEKFVSDFVAAWSKVMNADRFDIVAKKQAA" FT CDS 123732..124670 FT /codon_start=1 FT /transl_table=11 FT /gene="oxyR" FT /locus_tag="RPA0430" FT /product="hydrogen peroxide-inducible transcriptional FT regulator OxyR, LysR family" FT /function="InterPro IPR000847:IPR005119 COGs COG0583" FT /db_xref="GOA:Q6NCP0" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q6NCP0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25874.1" FT /translation="MISLRQLRYLSALARHGHFGRAADACSVTQPALSMQIAELERTLG FT IKVVERRPGEVFLTDIGREIARRAEEVLAATRDLVDFARHRAKPLTGRLSLGVIPSLAP FT YLLPKVLPLLLQHFPELRLELRESQTRPLVADVVSGVLDAALLALPVGHSDLDAIPLFD FT DPFLLAVPADDPRAETTPIGVEEIDQSRLILLEDGHCLRDQALAFCATARNRGIQMGSA FT GTASFGASSLTTVIQMVAGGYGITLIPQIAAEVERRDSRVKFLRLRRPQPGRSVGLVFR FT KTSPRRGDFEAFGEVVKQGIGGAAPIESAVA" FT CDS complement(124682..126364) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0431" FT /product="methyl-accepting chemotaxis receptor/sensory FT transducer with PAS domain" FT /function="InterPro IPR000014:IPR000700:IPR001610:IPR004089 FT COGs COG2202" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCN9" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000700" FT /db_xref="InterPro:IPR001610" FT /db_xref="InterPro:IPR004089" FT /db_xref="InterPro:IPR004090" FT /db_xref="InterPro:IPR013655" FT /db_xref="UniProtKB/TrEMBL:Q6NCN9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25875.1" FT /translation="MFSFTRSAGHDHAAAMLAALNRSQAVIEFDLDGNVIDANDNFLTA FT LGYSLPEIKGKHHRMFVDPSEHDSTAYREFWTALRAGQYQAGEFHRIGKGGREVWIQAS FT YNPILDKNGKPTGVVKFAADITAAKTQSLEDAGKLAAIGRAQAVIEFAMDGTVLTANDN FT FLAAMEYSLGEIKGRHHSMFVEPSVRESSDYREFWARLNRGEYFPGEFKRIGKGGKEVW FT ILASYNPILDARGKPFKVVKYATDVTAQKLKNADFSGQIDAIRKSQAVIEFSIDGTVLD FT ANDNFLHALGYSLGEIKGRHHSMFIDPAERESAAYRAFWAALGRGDYQAGEYKRIGKGG FT REVWIQASYNPILDLNGRPFKVVKYAADTTRQVLTRLGNERVRAMMESVAAGAEELNAS FT VREISEAMTKSRQTAMNAVGEVDAADSQANQLNDAAQAMSGIVELINHITGQINLLALN FT ATIESARAGEAGRGFAVVAAEVKNLANQAKQATDKIGTEISNLTSVSGDVVGALGKIKN FT AIQNVSEYVSSTAAAVEEQSTVTSEMSSSMQRAAAEAAAIAAG" FT terminator complement(126589..126610) FT /note="TransTerm prediction, 98+%" FT CDS complement(126654..128822) FT /codon_start=1 FT /transl_table=11 FT /gene="pnp" FT /locus_tag="RPA0432" FT /product="polyribonucleotide nucleotidyltransferase" FT /function="InterPro FT IPR001247:IPR001687:IPR003029:IPR004087:IPR004088 COGs FT COG1185" FT /EC_number="2.7.7.8" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCN8" FT /db_xref="HSSP:1SRO" FT /db_xref="InterPro:IPR001247" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR004088" FT /db_xref="InterPro:IPR012162" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR015847" FT /db_xref="InterPro:IPR015848" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018111" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCN8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25876.1" FT /translation="MFNIHSVEIDWGGRPLKLETGKVARQADGAVVATYGETVVLATVV FT AAKAPREGVDFLPLTVDYQEKAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFA FT DGWRNETQVIVTVLSHDMENDPDVLAMVAASAALTLSGVPFKGPIGAARVGFINDEYVL FT NPVLDEMAETQLELVVAGTADAVLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIDL FT AEKAAKEPRELTVVDDSEIEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKAIAHFF FT PEGQEPKYDKLRIAGVFKELEAKIVRWNILDTGKRIDGRDSKTVRNILAQVGVLPRTHG FT SALFTRGETQAMVVTTLGTGEDEQYVDSLSGTYKETFLLHYNFPPYSVGETGRLGGTKR FT REIGHGKLAWRAIHPVLPPHHEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPL FT KRPTAGIAMGLILEGERFAVLSDILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITE FT EIMKVALGQAKDGRIHILGEMSKALDRARAELGEHAPRIETFKIPTDKIREVIGTGGKV FT IREIVEKTGAKVNIEDDGTVKVASSDGESIKAAIKWIKSIASDPEVGEIYEGTVVKVME FT FGAFVNFFGAKDGLVHISQLAAGRVQKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVD FT QTTGEDLEAKQKAEAKAEGEAPAQAAGE" FT CDS complement(129161..129430) FT /codon_start=1 FT /transl_table=11 FT /gene="rpsO" FT /locus_tag="RPA0433" FT /product="ribosomal protein S15" FT /function="InterPro IPR000589:IPR005290 COGs COG0184" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCN7" FT /db_xref="InterPro:IPR000589" FT /db_xref="InterPro:IPR005290" FT /db_xref="InterPro:IPR009068" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCN7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25877.1" FT /translation="MSITAERKAEVIKTSATKAGDTGSPEVQVAILSERITNLTAHFKT FT HTKDNHSRRGLLKLVSTRRSLLDYIKKKDEARYKALLEKHNIRR" FT CDS complement(129433..130533) FT /codon_start=1 FT /transl_table=11 FT /gene="truB" FT /locus_tag="RPA0434" FT /product="putative tRNA pseudouridine 55 synthase" FT /function="InterPro IPR002501:IPR004510 COGs COG0130" FT /EC_number="4.2.1.70" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P60345" FT /db_xref="InterPro:IPR002501" FT /db_xref="InterPro:IPR014780" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/Swiss-Prot:P60345" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25878.1" FT /translation="MTVTTPDALLAPHDVQHAGADESAAQIRKPRDNNDPRNANRGGGN FT GKPRRDKRDVHGWVVLDKPIGMTSTQAVAVLKRLFSAKRAGHAGTLDPLASGGLPIAMG FT EATKTVPFVMDGRKRYRFTVAWGEERDTDDTEGRAVATSPDRPTAEAIRALLPRFTGVI FT EQVPPQYSAVKIQGERAYDLARDGEVVPLVPRPVEIHELTLVEHGDDGRSVFEAECGKG FT TYVRALARDMGRLLGCYGHICALRRTVVGPFDESDMIPLEELQALCDRAASGEGSLADA FT LLPVETALDDIPALAVTRADAARLHRGQAVLLRGRDAPHCSGTVYVTVAGRLLALAEVG FT NGELIPKRVFNLTGLTASSAVRKESI" FT CDS complement(130533..130946) FT /codon_start=1 FT /transl_table=11 FT /gene="rbfA" FT /locus_tag="RPA0435" FT /product="putative ribosome-binding factor A" FT /function="InterPro IPR000238 COGs COG0858" FT /db_xref="GOA:Q6NCN6" FT /db_xref="InterPro:IPR000238" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR020053" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCN6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25879.1" FT /translation="MSRQHQKSSPPGGSTRSLRVGELIRHAVAEILAQGGVHDPVLESH FT LVTVPEVRMSPDLKLATIYVMPLGGRDEKLVIDALEHHKRFLRGEIAHRVNLKFAPELR FT FRIDERFAEAERIDKLLRSPAVQKDLEPNSDQD" FT CDS complement(131120..133771) FT /codon_start=1 FT /transl_table=11 FT /gene="infB" FT /locus_tag="RPA0436" FT /product="putative translation initiation factor if-2" FT /function="InterPro FT IPR000178:IPR000795:IPR001687:IPR004161:IPR005225:IPR006847 FT COGs COG0532" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCN5" FT /db_xref="InterPro:IPR000178" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006847" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR013575" FT /db_xref="InterPro:IPR015760" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCN5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25880.1" FT /translation="MVDTKTPGDKTLTMPTKTLTLKPRVEQGVVRQSFSHGRSKQVVVE FT KRGKRRLGGDEPAAPAAPEVAKKPAPAPAAPPRQQQSRPAPQQSRSGMVLRTLTEDERT FT ARATALADARVREIEERKQAEIEAQRRAEQEKIEKAEREAAEARRKAEEERHRQEDEAK FT RKAETEAKKRFGDAEPAKKPAETSTTTTTAAPARPATTTTRTPTPAGRPPAVAAEAGDD FT DEAPRMIRRPGGPARPAPPPKQPAAKPGASKQRGRLTVVTALNADDVRERSIASFRRRT FT QRLKGHASNEPKEKLVREVVIPEVIAIQELANRMSERAVDVIRLLMKQGAMHKITDVID FT ADTAQLIAEELGHTVKRVAASDVEEGLFDVVDDSTDTEPRSPVVTVMGHVDHGKTSLLD FT ALRHANVVSGEAGGITQHIGAYQVTSPESGKKITFIDTPGHAAFTAMRARGAKVTDIVV FT LVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPDAKPDRVRTDLLQHNVQVESMG FT GDVVDVEVSAKNKINLDKLLEMIALQAEILELKTNTQRPAEGTVIEAKLDRGRGPVATV FT LVQRGTLRVGDIIVAGAEMGRVRALISDQGETVQEAGPSVPVEVLGFNGPPEAGDRLAV FT VENEARARQITDYRAHQKREKSAASVSGMRGSLEQMMTQLKTSGRKEFPLIVKADVQGS FT LEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAVILGFSVRANKEAAAAAK FT RNGIEIRYYNIIYDLVDDIKKAMSGLLAPTLRETMLGNAQILEIFNISKVGKVAGCRVT FT DGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVVAGQECGMAFENYTDMRAGDII FT ECYRVETIQRSL" FT CDS complement(133764..134543) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0437" FT /product="DUF448" FT /function="COGs COG2740" FT /db_xref="InterPro:IPR007393" FT /db_xref="UniProtKB/TrEMBL:Q6NCN4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25881.1" FT /translation="MLAAETGADLDNGPRAKTPATERMCAVTRQVRPTGELIRFVVGPT FT GEAVADLKRKLPGRGLWVTASREMVTQAVRRRVFAKGFKRDVKAPADLADAIERLLARS FT AQDALAIAAKAGQVVCGFGKVETALKSREAVAVIHATDGAADGIRKLDGLCRQIDEDAT FT AGRKFPRIAALSSAELDLALGRSNVIHAALLAGPAGQTFLSRCQILVRYRLADDGNADA FT ATAGTPIDTPKDAADQDAADEVRANAHNVERLGLLNG" FT CDS complement(134605..136218) FT /codon_start=1 FT /transl_table=11 FT /gene="nusA" FT /locus_tag="RPA0438" FT /product="putative NusA protein, transcriptional FT termination factor" FT /function="InterPro IPR003029:IPR004087 COGs COG0195" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCN3" FT /db_xref="HSSP:1K0R" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR009019" FT /db_xref="InterPro:IPR010213" FT /db_xref="InterPro:IPR010214" FT /db_xref="InterPro:IPR010995" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013735" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:Q6NCN3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25882.1" FT /translation="MAVSANRLELLQIADAVAREKTIDRSIVIAAMEDAIAKAARARYG FT SETDVHAEIDPKKGELRLSRHMLVVEQVENPANQISLKDAQRANPGAQIGDTIADTLPP FT LEYGRIAAQSAKQVIVQKVREAERDRQYMEFKDRIGDIVNGVVKRVEYGSVIVDLGRGE FT AIIRRDEMLPRESFRNGDRVRAYVFDVRRETRGPQIFLSRTHPQFMAKLFAQEVPEIYD FT GIVEIKAVARDPGSRAKIGVVSRDSSVDPVGACVGMRGSRVQAVVNELQGEKIDIIPWS FT PDIATFVVNALAPAEVSKVVIDEDRERIEVVVPDTNNQLSLAIGRRGQNVRLASQLTGW FT DIDILTESEESERRQADFEKTTRAFMDALNVDEVVGQLLASEGFTSVEELALVDPRELA FT SIEGFDEETAAELQTRASEYLDRIESELEARRLELGVEDALKDVPGVTSKMLVKFGEND FT VKTVEDLAGCATDDLVGWTERKDGAEPVKYPGILDGMEMSREDAEHLIMQARVKAGWID FT ESELASEEDPADEASDESAD" FT CDS complement(136221..137000) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0439" FT /product="DUF150" FT /function="InterPro IPR003728 COGs COG0779" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCN2" FT /db_xref="InterPro:IPR003728" FT /db_xref="InterPro:IPR020790" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCN2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25883.1" FT /translation="MTEPTPAVPETDDLAEPRLVIEPGVAARFCAVAEPVLMAMGYRLV FT RIKVSGDAGCTVQIMAERPDGTMLIDDCEAVSRALSPVLDVADPIDRAYRLEISSPGID FT RPLVRRSDFARYAGHLVKIEMAVPHQGRKRYRGLLDGVEGDAVRVQREGATKDEDPLVL FT LPMHDIGDARLVLTDELIAESMRRGKQAERDLKQSLGLAPEPPPHAKRSDPKKSHAPKR FT GPKAAKAPTKPKPQNTKQHRLAADKSRRGEIDTSEGD" FT CDS 137334..138419 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0440" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR019285" FT /db_xref="UniProtKB/TrEMBL:Q6NCN1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25884.1" FT /translation="MPAATSLLPELDDIVRQGDPVRRADAVRRISDLYIRGAESFQPDH FT VALFDGILLTLVPEIDVEVRSELAQRFSEITNAPPELVRQLVHDEDIGIAGPLLRRSMM FT LDDPTLVELARLRGQTHLLAISERLSISPPITDVIVRRGDRDVVRKVAGNAGAEFSATG FT FNGLIRRAAQDGVLAIAVGTRDDLSPPRLKDLLACSTDLVRRRLFESARPSARIAINRA FT MRELAGESRQPSVQRDFDAAQRSVVELHNRGELNEATVIGFARAHQYEETVAALSAMTG FT TRISTLDQMMSGERHDPVLILGKALGFGWATVRALIGLRLGPDRSVACPDVEEAQHNFE FT RLALSTAQRVLGFWKMRQADA" FT CDS 138543..139391 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0441" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR008775" FT /db_xref="UniProtKB/TrEMBL:Q6NCN0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25885.1" FT /translation="MLSEADITTHAQRIRDDGYTVIERAADPALVAALIGAVERIERDH FT QLGCAKTSFEGFKTLRVNNLLTYDEVFWEVPLHSSVLPVVEAVLDKECLLSSFCSLVLG FT PGQEAQPIHEDTQLIPLPRPHIPITLNAIWALSDFTATNGATRIIPGSHKYETSPVYGQ FT DYDAVTATMPAGSVMLFDSALWHGGGPNTSEARRFAFSCAYCWGWMRQQENLQLGIPRE FT IAQRFPRRLQELCGYSVYKGQFGHIDNGDPIELLGRERGKRMVWEATDVRNARLAGQVT FT N" FT CDS complement(139404..140201) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0442" FT /product="Putative methyltransferase" FT /function="InterPro IPR003358 COGs COG0220" FT /db_xref="GOA:Q6NCM9" FT /db_xref="InterPro:IPR003358" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCM9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25886.1" FT /translation="MAVLYAGRPVQKCERSRLMFNIDQPDSAPDNEDHDGDVVMHGQGS FT FFGRRKGHKLRAHQADLIENLLPHLSLQIDSPAPEPLTTLFDPPVEHMRLEIGFGGGEH FT LIAEALAHPDTGFIGAEPYVNGMAKILARIEAENIRNIRLFAGDASELLAWVPAGSLAR FT IDLIHPDPWPKRRHWKRRFVQDATVAAMARALTPHGEFRFVCDIDGYTAWTLAHLLRAP FT CFDWLAQRADDWRKPWPNYTMTRYGRKAEREGRRANYLRFERL" FT CDS complement(140276..140695) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0443" FT /product="possible transcriptional regulator, XRE family" FT /function="InterPro IPR001387 COGs COG1396" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCM8" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:Q6NCM8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25887.1" FT /translation="MSTKAPNPVDKYVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKY FT EKGTNRVGASRIQQIAEVLQVPVSFLFEGGPSGGLANGNGFSEAPSPSYVSDFLATSEG FT LALTRAFTKITDAKLRRSIVDLVERIAAREADETN" FT CDS complement(140896..142506) FT /codon_start=1 FT /transl_table=11 FT /gene="lnt" FT /locus_tag="RPA0444" FT /product="putative apolipoprotein n-acyltransferase" FT /function="InterPro IPR003010:IPR004563 COGs COG0815" FT /db_xref="GOA:P61036" FT /db_xref="InterPro:IPR003010" FT /db_xref="InterPro:IPR004563" FT /db_xref="UniProtKB/Swiss-Prot:P61036" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25888.1" FT /translation="MTRRGVLSRIASGIILAWGWKRAVIALLAGALSSLAMEPFNAWPV FT LFITFPIAVWLIDGSAAGKRRGVPAAAMAGWWFGFGYFVPGLYWIGYAFLVDADTFAWL FT LPAAICGLPAYLALFTALGFALARLLWRPDSLRILSLAVSLTISEWLRGHLLTGFPWNA FT FGYALTEPLVLAQSISVIGIWGLTLLTVAIFASPAVLIDGGTNTRRRWAVPAMALGVLA FT AMTVFGGIRLKLSPTQLVDNVRLRIMQPNLPQDARFNYSAKADVMQKYLSLSDRSTGPK FT STGVRDVSLLIWPESAFPFFLSREADAMAQIAELLPKGTVLLTGAVRPPELPPGRRITR FT AYNSIYAIDHDGSILSVYDKLHLVPFGEFLPYQNLMEKIGFVQLTKVQGGFLSGVARHN FT LELPNAPPLLPLICYEAIFPDEIAIGNNRPGWMLNLTNDGWFGISSGPYQHLQQARMRA FT IEQGLPLVRAANTGVSAVIDPVGRIVAELGLGVEGVLDSGLPAPVAPTIYARVGELPAA FT VLVALVMMLVLLRKRPPGS" FT misc_feature complement(order(140920..140985,141817..141867, FT 141907..141972,142033..142098,142138..142203, FT 142219..142284,142321..142386,142402..142467)) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(142396..142506) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.982) with cleavage site probability FT 0.898 atresidue 37" FT CDS complement(142503..143648) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0445" FT /product="possible HlyC/CorC family of transporters with FT CBS domains" FT /function="InterPro IPR000644:IPR005170 COGs COG1253" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005170" FT /db_xref="UniProtKB/TrEMBL:Q6NCM7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25889.1" FT /translation="MPDGDRAENGSQASLQDSTRGQLPAVVHQGEVLHPHGGSWLIRAI FT RSLFGWKPGSVRDDLQVVLDTSPPDDTGFSTLERTMLRNILGLHDRRIADVMVHRADIV FT AIKQDIQLGELLSLFQDAAHSRLVVYNETLDDPVGIVHIRDLVAFMTAKAKVPPATVAK FT RKKALPAGLDLRAIDLKMPLTETGIIRKLLYVPPSMRAIDLLAQMQAARIHLALVVDEY FT GGTDGLVSIEDIVEQIVGEIDDEHDSTEPPSIVRQADGSFIADARASLEDVRAMIGDQF FT VTGEAGEDVETLGGYLVNHVGRLPVRGEVIAGPGTFEFEVLDADPRRVKRLRIGPRKER FT PAPRTRDSRRRETATDSTAPQTTDSGGSTSSPPAGDGTGSP" FT CDS complement(143650..144222) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0446" FT /product="Protein of unknown function UPF0054" FT /function="InterPro IPR002036 COGs COG0319" FT /db_xref="GOA:Q6NCM6" FT /db_xref="InterPro:IPR002036" FT /db_xref="InterPro:IPR020549" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCM6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25890.1" FT /translation="MSQPRPGHRPDCNGADPDSNFASMTHSARPFTEVVIEADCWQAEA FT SAEATVLRAIETAADAVDADTGGAELAVMLTDDDHIRQLNASFRGKDKPTNVLSFPAAQ FT PEVQPDGAPRMLGDIAIAYQTVRREADDEGKPFDHHLSHLAVHGFLHLVGYDHETEEEA FT EEMEDAERAILARLGIPDPYAGQDRVS" FT CDS complement(144222..145103) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0447" FT /product="possible phoH-like protein" FT /function="InterPro IPR001687:IPR003714 COGs COG1702" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCM5" FT /db_xref="InterPro:IPR003714" FT /db_xref="UniProtKB/TrEMBL:Q6NCM5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25891.1" FT /translation="MVVDSRGNHITIGGSREGCDAARRVLETLYAQAISGHDLVQGDVE FT GAIRAVIAQGSLFEFDTKQPSATAFEAINLRKRPVRARTAAQDSYIRALKRHELVFGVG FT PAGTGKTWLAVAHAAQLFERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYD FT ALYDLMDARIVERALQSGEIEIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLG FT ENSRMIITGDPSQVDLPNGQTSGLAEAARLLSGVEGIAQVQFRAEDVIRHELVARIVAA FT YEGAPSPANGKS" FT CDS complement(145284..146675) FT /codon_start=1 FT /transl_table=11 FT /gene="miaB" FT /locus_tag="RPA0448" FT /product="tRNA-i(6)A37 modification enzyme MiaB" FT /function="InterPro IPR002792:IPR005839:IPR006463:IPR006638 FT COGs COG0621" FT /db_xref="GOA:Q6NCM4" FT /db_xref="InterPro:IPR002792" FT /db_xref="InterPro:IPR005839" FT /db_xref="InterPro:IPR006463" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013848" FT /db_xref="InterPro:IPR020612" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCM4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25892.1" FT /translation="MSPPRKLHIKSYGCQMNVYDAQRMVDALAPEGFVETANVDDADLV FT ILNTCHIREKASEKVYSELGRLRVARDEAANHGRRMQIAVAGCVAQAEGAEIIRRAPVV FT DVVVGPQSYHNLPQLLAKAEQHGRALETEFPIEDKFGVLPQPAPDAIRARGISAFVTVQ FT EGCDKFCTFCVVPYTRGAEMSRPVAAIVEDVKRLAENGVREVTLIGQNVNAYHGDGPDR FT LAWSLGRLVRRLAEIPGIVRLRYSTSHPNDVNDDLLAAHRDLPALMPFVHLPVQSGSDR FT ILAAMNRKHTADDYRRVIDRFRLASEAIAFSSDFIVGFPGETERDFSATLALVAQIGYA FT GAYSFKYSPRPGTPAADMAEMVPAAVMDERLEQLQQLIDQQQSAFNKAAIGRTVEVLFE FT RAGRKPGQIVGRTAYLQPAHVMAPDSIIGKVLPVRVDSLERYSLLGELASATSRPADAM FT AATGA" FT terminator complement(146701..146718) FT /note="TransTerm prediction, 98+%" FT CDS complement(146795..147454) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0449" FT /product="possible hydrolases/phosphatases" FT /function="InterPro IPR000104:IPR005834:IPR006402:IPR006439 FT COGs COG0637" FT /db_xref="GOA:Q6NCM3" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006402" FT /db_xref="InterPro:IPR006439" FT /db_xref="UniProtKB/TrEMBL:Q6NCM3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25893.1" FT /translation="MTPELVIFDCDGVLVDSELISCRVHAETLTRYGYPITPDQVAARF FT LGRSGREARREIEAEIGRRFADDIEANLLDALLRAFAETLQPIPFVTDALDTLGRPFCV FT ASSGTLDRIGVALTHAGLHARFAPHLFSAQQVAHGKPAPDLFLFAAAQMGAAPECCVVI FT EDSVPGVLGAKAAGMTVLGFHGGSHCTDATAAALAAAGAGRCFDDMRQLSGIIEEI" FT CDS complement(147542..147973) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0450" FT /product="transcriptional regulator, FUR family; probable FT FUR protein" FT /function="InterPro IPR002481 COGs COG0735" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCM2" FT /db_xref="InterPro:IPR002481" FT /db_xref="UniProtKB/TrEMBL:Q6NCM2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25894.1" FT /translation="MSEPKATEIEARCAATGMRMTEQRRVIARVLAESEDHPDVEELYT FT RCVAIDDKISISTVYRTVKLFEDAGIIERHDFREGRARYEQMRDSHHDHLINLRDGTVI FT EFTNEEIEKLQAEIARRLGYKLVDHRLELYCVPLEDDKS" FT CDS complement(148036..148521) FT /codon_start=1 FT /transl_table=11 FT /gene="rimI" FT /locus_tag="RPA0451" FT /product="putative RimI protein, peptide FT N-acetyltransferase" FT /function="InterPro IPR000182:IPR006464 COGs COG0456" FT /EC_number="2.3.1.-" FT /db_xref="GOA:Q6NCM1" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR006464" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6NCM1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25895.1" FT /translation="MMTWLAEFWGYADTVVETATLRDAPKLAELHAASFHRGWDEQEFA FT DLLSERNTLVHRLRVGRRIIGFVASRIGADEAEILSIAVAASYRGRGLSREMLLTHLGH FT LAGRGVATVFLEVEENNQPARRLYNRTGFQVVGRRERYYRQPNGEQLNALIMRRDLS" FT CDS complement(148544..149239) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0452" FT /product="Glycoprotease (M22) metalloprotease" FT /function="InterPro IPR000905 COGs COG1214" FT /db_xref="GOA:Q6NCM0" FT /db_xref="InterPro:IPR000905" FT /db_xref="UniProtKB/TrEMBL:Q6NCM0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25896.1" FT /translation="MLILAIDTALDACAAAVLDTEANRLLAGESQAMQRGHAEALMPLL FT GRVMDASGIGFLDIDRIAVTTGPGSFTGLRVGLSAARGIALAAAKPVVGLTTLSAFAAP FT LVSETDETPILSVIDARHDHVYYQLVAGNGTMIVRPRVAPIAEALESARYGAPRLVGNA FT AQLIADRWPALTPPPLAVDQRPAPDIGWLAWLGAAATPEAAPAKPFYLRPPDAKPKIDP FT IAQSAQPAA" FT CDS complement(149376..149942) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0453" FT /product="possible NifU-like domain (residues 119-187)" FT /function="InterPro IPR001075 COGs COG0694" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCL9" FT /db_xref="InterPro:IPR001075" FT /db_xref="InterPro:IPR014824" FT /db_xref="InterPro:IPR017065" FT /db_xref="UniProtKB/TrEMBL:Q6NCL9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25897.1" FT /translation="MFIQTEPTPNPATLKFIPGRSVLDSGTLEFTDASQAARSPLAARL FT FDIDGVSGVFYGTDFVTVTKDKGEWQHLKPAILGAIMEHYMSGTPILADGKSDGEDGDD FT DEFYADADAETVEIIKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSST FT ATLQHGIQNLLKHFVPEVVEVRPVT" FT CDS complement(150088..150636) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0454" FT /product="conserved hypothetical protein" FT /function="COGs COG0532" FT /db_xref="UniProtKB/TrEMBL:Q6NCL8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25898.1" FT /translation="MAASHRCAGARWGTPGAPMSSQRRSYESGHKPKCLVIVDDTAEWD FT RAVYYGSRWAVRVGGGVVMLRVIEILDKNQQWLGVADVMRAEAIETAELALDRASGRAN FT GVAGITPERVIREGDTIAQVRKVIEQDVDIVMLVLAADDGPEGPGPIVTAMVRHLGTFP FT VPVMMVASSLTDDDIDALA" FT CDS complement(150828..151880) FT /codon_start=1 FT /transl_table=11 FT /gene="trpS" FT /locus_tag="RPA0455" FT /product="trytophanyl-tRNA synthetase" FT /function="InterPro IPR001412:IPR002305:IPR002306 COGs FT COG0180" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCL7" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002305" FT /db_xref="InterPro:IPR002306" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:Q6NCL7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25899.1" FT /translation="MAITQRVFSGIQPTGNLHLGNYLGAIVNFVKMQETHNCVYCVVDL FT HAITVPVTVWGGPDELRKNIREVTAAFIASGIDPKKQIIFNQSQVAEHSELAWVLNCIA FT RLGWLNRMTQFKEKAGKDRENVSVGLYDYPVLMAADILVYRATHVPVGEDQKQHVELTR FT DIAQKFNNDFSASIAAQGFGDAYFPLPEPVITGPATRVMSLRDGTKKMSKSDPSDYSRI FT NLTDDADAIAQKIKKAKTDPEPLPSEEKGLETRPEADNLVGIYAALSGKPKTGVLTEFG FT GAQFSAFKSSLVDLAVAKLSPIADEMKRLSADHAYVDSVLADGSDRARAIAAETMRAVK FT DIMGMVRKTS" FT CDS complement(151936..153492) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0456" FT /product="possible mviN family virulence factors, possible FT efflux protein" FT /function="InterPro IPR004268 COGs COG0728" FT /db_xref="InterPro:IPR004268" FT /db_xref="UniProtKB/TrEMBL:Q6NCL6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25900.1" FT /translation="MLRPLLTVSAGTLSSRLLGFVRDALVAALLGAGVAADAFLLAFQL FT VNVTRRLLTEGALNAALVPAWLKVREYNGTAAAAAFAGRLLGTIALATLLLAILLGVFM FT PLLIAVLAPGFVGQPALVMATRDARLMLPYLAFAGPVAVMMGLFNAQGKVGLTAFSPLL FT FNISLIIVTAALLLGHDDPATAALILSGTVGIAGLLQLSILAFNGHGERLATPLRAGFD FT AAMRTFFAKAIPGMIANSGPQLLIVAGAIIASAQPAAVSWLYFANRLIELPLGIVGVAM FT GAVLVPELARAVRGGDRTALSEAASRGLELAVGVALPATFGLIVLAEPIVRLLFEHGAF FT SAADAAATAQALAVLAAGLPAQVLTKNWSAAFFAREDTGTPLMATLISVAVALVAAVLL FT GRLFGAAGVAAAISIGAWSNAALLLGRGVQRFGVTIDASARRRLMLIALAAGAMGALLW FT QASSFVLPNAAAGSTLVQAAVLAVLIGGGLIVYAAALILLGVVRPNAAAHALRRPRGLR FT D" FT misc_feature complement(order(151990..152055,152101..152157, FT 152221..152286,152302..152358,152398..152454, FT 152500..152565,152626..152682,152695..152760, FT 152878..152943,152959..153024,153046..153102, FT 153148..153213,153355..153420)) FT /note="13 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 153767..154834 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0457" FT /product="possible cabohydrate kinases" FT /function="InterPro IPR002173 COGs COG0524" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCL5" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q6NCL5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25901.1" FT /translation="MHRPDPHDCGIFLISPRYGSNSMSSAQYDVLAIGNAIFDVLVRTE FT EDFLVKHGMAKGGMALIDEARAAAIYADMGQATEMSGGSAANTIVGLASFGARTAYLGK FT VKDDQIGKLYTHDIRAAGVTFDTKPATAGPATGCSYILVTPDGQRTMNTYLGAAQDLSP FT ADIDEAKIAASAITYLEGYLWDPPQAKEAFLKASQIAHGAGRKVALTLSDAFCVDRYRG FT EFLELMRSKTVDLIFANEAELHSLYQTSDFDAALTLLAQDVALGVVTRSEKGCAVVDKD FT GVTLVPAAAIDQLVDTTGAGDLFAAGFLFGLVRNLGYENAGRLGALAAAEVIQHIGARP FT QVSLKELAQQHGLAV" FT CDS complement(155057..156610) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0458" FT /product="possible fatty acid-CoA ligases." FT /function="InterPro IPR000873 COGs COG0318" FT /db_xref="GOA:Q6NCL4" FT /db_xref="HSSP:1BA3" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:Q6NCL4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25902.1" FT /translation="MDLERIRRAGGCAGSRFSRARPGARSPHRHLVDEPAGMDPHTIRR FT RQSGTDPGHHQSGLPPERTGIRARQSRLRRAGDGHRVQDLALHGDVEYADPGTGDLVAG FT ALQSAKLPKLRTVIQIGGPKAPGTIAFDEVAAMGGARHRDQIAAFASELQFDDAVNIQF FT TSGTTGSPKGVTLTHHNILNNGYFVGRAMKLTEADRICIPVPLYHCFGMVMGNLASVTS FT GAAMVYPGEGFDPLVTLQTASREKCTALYGVPTMFIAELDHPEFASFDLSSLRTGIMAG FT APCPVEVMRRVNDAMNMREVTIAYGMTETSPVSFQSAVDDPEDRRVSTVGRIHPHVEVK FT VVDLDGKIVPRGQRGELCTRGYSVMLGYWDEAEKTADVLDAAGWMHTGDLATIDDEGFC FT NIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADDRYGEELCAWVRPRPGE FT TLTADDVRAFCQGQIAHNKIPRYIEFVDEFPMTVTGKIQKFIMREKVESKLGLKAMKTA FT " FT CDS complement(156259..156750) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0459" FT /product="possible fatty acid-CoA ligases" FT /function="COGs COG0318" FT /db_xref="GOA:Q6NCL3" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/TrEMBL:Q6NCL3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25903.1" FT /translation="MTSSTPSYVCGVSDAPLLGITIGQALDRAVALWPDREALVSPSHD FT TRWTWSEFAARVDALAAGFLALGLERGARIGIWSMNRPEWTLTQFAAAKAGLILVTINP FT AYRLSELEFALAKVGCAALVTATAFKTSHYMEMLNTLIPELAISSPARCNRPSCRSCAP FT " FT CDS complement(156880..158067) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0460" FT /product="putative esterase" FT /function="InterPro IPR001466 COGs COG1680" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR001466" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:Q6NCL2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25904.1" FT /translation="MQSSNQIDQSLRQMSERGDIPGVVAIAGNSKEVLYQGAFGKRDLS FT KPEQMTTDSVFWIASMTKAITAAAAMQLVEQGKLSLDEPIGKVLPDLAEPLVLDGFDAD FT GTPKTRPAKSPITLRQLLTHTAGFCYDMWSADMVKYMERHGIPGIIGCQEAALKTPLAS FT DPGTRWEYGINIDFAGKAVEAASGMKLDAYLRDHLFAPLGMTDMGFKIKDEQRKRLVAV FT HARGEDGSLSPIPFEVAQEPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPET FT VAMMGQNHIGDLNVTKLNSAIAFATNDVDLYPGMTKKWGLSFLINTEKTPEGRSAGSLA FT WAGLANTYYWIDPTRDVCGVILMQVLPFADAKCLEAFAAFERGVYAALGAGQQAA" FT CDS 158795..160288 FT /codon_start=1 FT /transl_table=11 FT /gene="gabD1" FT /locus_tag="RPA0461" FT /product="succinate-semialdehyde dehydrogenase" FT /function="InterPro IPR002086 COGs COG1012" FT /EC_number="1.2.1.16" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCL1" FT /db_xref="HSSP:1AG8" FT /db_xref="InterPro:IPR010102" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="UniProtKB/TrEMBL:Q6NCL1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25905.1" FT /translation="MSPTAAARAADQAASLRDRLKDPSLLREQCYIDGAWSGTSTIAVT FT NPASGQTIAKVPHLGAAEATQAVEAAAQAFPAWAKLTAKQRSNILRKWFELIIANREDL FT ALILTSEQGKPLTEALGEVDIGAAYVEFFAEEARRVYGETIPTQRADARLIAIKQPIGV FT CGAITPWNFPSSMITRKVSPALAAGCTVVLKPAEETPLSAFALAALAEKAGVPKRVFNV FT LTGDAPAIGKVLCEHPAVRFVGFTGSTEVGKILYKQASVGVKKLGLELGGNAPFIVFDD FT ADVDAAVEGAMVSKYRNMGQTCVCANRLYVQDGVYDAFVEKLAAKVKAMKVGDGTEQGV FT TQGPLINEAAVEKTERHIADALSNGAKIITGGKRHALGGTFFEPTVLADVRPDALVAHE FT ETFGPLAPVFRFKDEAEVIKLANNSPFGLASYFYARDLGRVWRVAEALESGMVGVNTGL FT ITTEVAPFGGVKESGLGREGSHHGIEEYVEIKYVMMAGI" FT CDS complement(160500..161405) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0462" FT /product="putative enoyl-CoA hydratase/isomerase FT superfamily" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.-" FT /db_xref="GOA:Q6NCL0" FT /db_xref="InterPro:IPR001753" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6NCL0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25906.1" FT /translation="MPEFSTLTIAPDPNAPRIARLVLNRPDRFNAINDAMPREIRAAVE FT WAQAEDAIHVIVIEGAGKGFCGGYDLVDYAESDIDHPCQQEKEPWDPLVDYAAMKRNTE FT DFMSLWRCSKPTIAKIHGAAVAGGSDIALCCDMIVMADDARIGYMPTRVWGCPTTAMWT FT FKLGPTRAKQMMFTGDVITGQTAAEWGLVNLSVPVAELEQATMKLATRVAGVPKSHLAM FT HKLVVNQVMLNMGLEQTQMLATIFDGVSRHNPEGLWFRRYAQDAGFKAAIEWRDSGRPI FT PEGDDARARIREIDERRSAR" FT CDS 161492..162121 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0463" FT /product="transcriptional regulator, TetR family" FT /function="InterPro IPR001647 COGs COG1309" FT /db_xref="GOA:Q6NCK9" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q6NCK9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25907.1" FT /translation="MNRTRSDAADSPPAIRDRLLDAAVECLIELGVAGTSTLAVQHRAG FT VSRGALLHHFPSREVLLAASVSELIRRNEHAVRSFVEALPSRGDRLKVAMGALAFAARQ FT PAYLAELELWAVARTDTALRQTLIAAERLAKREIDRVHYQLFGDWAKSDSYAEVVALTQ FT HFMRGLAISENVRLSPKRRDELIASWTEAIRPILERGLTTRTASKA" FT CDS 162146..163771 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0464" FT /product="putative long-chain fatty-acid-CoA ligase" FT /function="InterPro IPR000873 COGs COG0318" FT /EC_number="6.2.1.3" FT /db_xref="GOA:Q6NCK8" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:Q6NCK8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25908.1" FT /translation="MNSPPLRESYWAADQSRPVLDVAIGEVLAEVAAQEGDRLALVEVV FT PNGMDSPVGAASTSRRWTYAQLNDDARRCASWLLTQFKTGDHICVWAPNVPEWIVLQYG FT AALSGLVLVTANPALKASELEFVLQQSQSVALFHLDAFRGVETGAVARSFASAKLRCIS FT FSGWLAEIRRTEIGALPRIDPGQPAQIQYTSGTTGRPKGALLHHRGLITNASYVAARAG FT LDHSVLLSPMPLFHTAGSIMSVLGCLNSRSTLVLPLLFDPGTVLDAIAHTRADTLFGVP FT TMLLAVIDAQLQAPRDLSSLRVAASGGAQVPPELHRRIHDALKLPLLTVFGQTELSPIV FT SQTCIDDPDEQRIHSVGRPLWNVEVRIVDPNGDRVVVIGVEGEIQVRGYQTMLGYFNAP FT KETSETITADGWLRTGDLGAMDEAGYLRITGRLKDMIIRGGENIYPAEVEACLLRHPAV FT ADISVFGAPDDKWGEVVAAAVRLVPDVPVTATELSAFCKTEIAPHKAPTVWYACTGFPL FT TASGKIQKFRLRDAAVEGELQRLS" FT CDS complement(163862..165295) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0465" FT /product="possible transmembrane protein" FT /function="InterPro IPR002160" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCK7" FT /db_xref="InterPro:IPR010621" FT /db_xref="InterPro:IPR010679" FT /db_xref="UniProtKB/TrEMBL:Q6NCK7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25909.1" FT /translation="MIGWLKAISAAATTALLLMTAPARSEPAPISDEEALSLGVDAYLY FT FYPLVTMDLTRKQSTNVEAGKEFGKGPMNSFVSVPAYPPADFRTIVRPNFDTLYSIAWL FT DLSREPMVVTAPDTNGRYYLLPMLDMWTDVFASPGWRTTGTQAQKFLVTAPGWSGAVPT FT GMQRVESPTPIIWIIGRTKTDGPSDYAAVHRIQAGYTATPLSQWGKPPVTPPAFVPDPA FT IDMKTPPKQQVDSMPAGQFFAYAAELLKQNPPHITDQPMIARLRRIGLEPGKGFDLDKA FT APNVRKALDAAPAEALKLMSWKMPTMARVTNGWSMNIDTMGVYGNYYLKRAIVAQFGLG FT ANVPEDAIYPVNVADETGKPLDGTSNYVLHFQKGATPPVDAFWSLTLYDSEGFPVPNAL FT QRQALSSWMPLKPNADGSLDLLIQNASPGTEHESNWLPAPKGPFTLTMRMYAPKQEALT FT GRWAPPPVTRVQPPTGFSQ" FT sig_peptide complement(165218..165295) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.997 atresidue 26" FT CDS complement(165435..166118) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0466" FT /product="conserved hypothetical protein" FT /db_xref="GOA:Q6NCK6" FT /db_xref="InterPro:IPR016085" FT /db_xref="UniProtKB/TrEMBL:Q6NCK6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25910.1" FT /translation="MWRAFGTVILSALLASAATAQDAASMKKDMVGQWELATTERSKTC FT VVTLTSEPAAKGLKLTLEPDCAKTLPFTKAIVAWDVKGLDIVRLETADGDSVIDFTEVE FT SGIFEGHRDGEGIYILQNLVAARSLAKSMEQMIGDWTMVRGNGRQVCGLTLTNTEAGND FT NFQAFLKPRCDAQIAGFGPTMWRLEHGAMLLVAPNGDTWRFEADDNAQWRKMPDTADPL FT IMLRQ" FT sig_peptide complement(166056..166118) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.981 atresidue 21" FT CDS complement(166121..167107) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0467" FT /product="putative glycerate dehydrogenase" FT /function="InterPro IPR006139:IPR006140 COGs COG1052" FT /EC_number="1.2.1.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCK5" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCK5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25911.1" FT /translation="MPGETGASKPIDLLIYGPRKEVIDQGFPAGYVLHKCERADDLEKL FT SDEARGRIRGIAVTGLVPTGAAMLARFPKLEIVASFGVGYDHVDSAWAAQHGVIVTNTP FT DVLTEEVADTALGLLIATLREFIRADKYVRAGRWQTQDYPLSTGSLRDRKVGMVGMGRI FT GQAIARRLDASLVPVVYHSRKPAPGVAYKHYPNLIEMAKEVDTLVVITPGGPTTAKLIN FT AEVLDALGPRGVVINVARGSVIDEAALIEALKSGKILAAGLDVFAAEPTVPEELRAMDN FT VVLLPHIGSASVVTRNAMNQLVVDNLKAWFSGRPPLTPVAETPVKGR" FT CDS complement(167107..167931) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0468" FT /product="putative ATP-binding protein of ABC transporter" FT /function="InterPro IPR000515 COGs COG0600" FT /db_xref="GOA:Q6NCK4" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6NCK4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25912.1" FT /translation="MSAQPTSRDETSPFGARAGLRVALPIVVLLAAIVAWDLVVRLNQI FT PPYVLPGPLLVASTLMQDWPVLFGSLLTTLWTTLEGFVAAAVGGIALALLFNQSRLLEY FT SLFPYAVVLQVTPVIAIAPLLLIYLPQETAVIVCAWIVAFFPVLSNTTLGLNSVDRNLA FT GLFRLYGASRWQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAY FT RIAESGYRLNIPRMFAALLLLSTAGIVIYLLLALISHLLLRRWHESALGKDN" FT misc_feature complement(order(167155..167220,167260..167325, FT 167338..167403,167467..167532,167545..167610, FT 167647..167712,167806..167871)) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(167928..168758) FT /codon_start=1 FT /transl_table=11 FT /gene="AtsC" FT /locus_tag="RPA0469" FT /product="putative sulfate ester transporter; ATP-binding FT component." FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1116" FT /db_xref="GOA:Q6NCK3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6NCK3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25913.1" FT /translation="MASSPRPSAADAGATGPAIELRSVTKTYRTGTLALGPIDLNIGRG FT KFVSLLGPSGCGKSTALRMIAGLAAPSSGRIEVGTASPRGRGEHPIGFVFQEPTLMPWA FT SIRHNVALPLKLAHVASTEIARRVDEVLARVELSEFADAFPRELSGGMKMRASLARALV FT TRPDILLLDEPFAALDEITRFRLNDDLLALWRELQMTVVFVTHSVFESVYLSQRVVVMT FT PRPGRIAASFDIDAPTSRGEEFRLSADYAAQCREVSRALASASEGALSTREARA" FT CDS complement(168767..169909) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0470" FT /product="perplasmic binding protein of ABC transporter" FT /function="InterPro IPR000694 COGs COG0715" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:Q6NCK2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25914.1" FT /translation="MSPAFLLRALTGVLLAVGVALASPVHASGHGHGAEKPAEKPPEPP FT PPPRPKKPPPPKVQPVRKVPEGGFDKVSFGTNWVAEGEHGGFFQAVADGTYKTYGLDVS FT IVPGGPNVNNRALLIAGKLDFFMTANTLQSFDAVANNVPVVAIAAIFQKDPQVFVSHPE FT SKIETLNDLKPLTLFVSKEGITSYFQWLKSEYGFSEAKVKPYTFNPQPFIIDRRSAMQG FT YVTSEPFTVEQAAKFKPSVLLLADYGLNGYSTLIETRRDLIDKNPDMIQRFVDASIIGW FT YNYLYGDNSAGNAMIKQLNPEMTDEMLSYSVDKMKQYGIVDSGDAIKNGIGAMNDERYA FT SFFDKMARAGVVTRGLDFRKAYTLQFINKGVGVDLRPKQK" FT sig_peptide complement(169826..169909) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.828 atresidue 28" FT CDS 170039..170851 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0471" FT /product="putative creatine amidohydrolase" FT /function="InterPro IPR003785 COGs COG1402" FT /EC_number="3.5.2.10" FT /db_xref="GOA:Q6NCK1" FT /db_xref="InterPro:IPR003785" FT /db_xref="UniProtKB/TrEMBL:Q6NCK1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25915.1" FT /translation="MTKLPPRDWSAIYWPEIAGADPSRWIAVLPLAAIEQHGPHLPLST FT DVTIAEAYLARVRERLRDDIPATFLPVQAIGLSTEHLSFPGTLTLSTETALKLWTEIGD FT SIARAGVRKLVMVTSHGGNSAAMGLVAQELRARHQMLVVTTGWARFGMPDGLFAADELR FT HGIHGGATETSIMLAHAPELVRADRIADFRPTSVAMEQTYRWLSAQRPAPFAWAAEDLH FT PSGAIGDASAATAEKGRRLLDHGAGAFCELLADMHRFDLAALSIQPSA" FT CDS 171085..173295 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0472" FT /product="OmpA-like transmembrane domain" FT /function="InterPro IPR000498" FT /db_xref="GOA:Q6NCK0" FT /db_xref="InterPro:IPR007049" FT /db_xref="InterPro:IPR011250" FT /db_xref="UniProtKB/TrEMBL:Q6NCK0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25916.1" FT /translation="MALLPVTGPQKLTLLPTFVRLRTTFRCRRGDEARRNAARSFAFQV FT SLMIVRRRPARPTSARRDFGSRELSTPHNRISLRPSASALIAGAATAAALLLPQGAAAG FT GIGKQRPDPAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNF FT VTGSNLLLGVEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGVIAGRWLG FT YVTGGLAFEHERYLTDPDVGRVMNARIGWAAGAGVEYGFTPNWSARVEYLYSQYQNATV FT DLPTGASYATSLNLQTVRVGVNRKMDWFGTGSTDAFPSLAAVADPESGRWEIHGQTTFI FT GQGYPSFRAPYSGTNSLFPGAQFKNTWSTSLFANVRLWDGGEFYFNPEFLQGYGLSDTV FT GAGGFPNGEAQKSGFAYPHFSPSRFYLRQTFGLGGEQEQLASSGSQLSGKADISRLTLQ FT VGRFSVIDVFDGNSYAHDPRRDFMNWSIWASGAFDYAADKLGLGYGATAELNQKQWAIR FT AGYFLVDAESNSNNYDMKLLRRGEYVAELETRYSLFGLPGKLRTLGFINSTYSGSYRET FT LNDPSLNLDITQTRRGRIKYGYALNLEQAVTDDIGVFGRWSWNDGKNEIMAFTDIDSSL FT SGGVSIRGQRWGRPDDVIGIAGALNGLSRDHRDFLAAGGLGPLIGDGALNYRRERVFES FT YYALALNSSWTATADYQLIANPAYNADRGPVSVFSGRVHGEF" FT CDS complement(173326..174957) FT /codon_start=1 FT /transl_table=11 FT /gene="PA3602" FT /locus_tag="RPA0473" FT /product="possible glutamate synthase." FT /function="InterPro IPR002932 COGs COG0069" FT /db_xref="GOA:Q6NCJ9" FT /db_xref="InterPro:IPR002932" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25917.1" FT /translation="METLLLPLSPRYIVLTISAVLTTLLATLAAFDVDTPMFGVVLVPL FT LVFGALTLLGIHDLLQTSHAVLRNYPIAAHLRFLLEEMRPEMRQYFFESEKDGKPFSRD FT TRALIYQRAKMELDKRPFGTQKDVYGDGYEWMHHSVAPRPHADEPFRITIGGPDCAKPY FT SASVFNISAMSYGALSPNAIRALNAGAMKGGFAHDTGEGGVSPYHREHGGDLIWEIGSG FT YFGCRTRDGRFDPEAFARVATDDQIKMVELKVSQGAKPGHGGVLPMAKISEEIAQIRGV FT GMDEDCVSPPYHKAFSTPIEMMRFIAEMRRLAGGKPTGFKLCVGHPWEFLAICKAMLVT FT GIYPDFIVVDGKEGGTGAAPLEFMDHLGMPMRDGISFVHNALIGIGARDRIKLGAAGKI FT ATGFDVARAMALGADWCNSARGFMFALGCIQSLSCHTDRCPTGVTTQEPSRYRALVVPH FT KLERVYNYHRATLQALAELVAAAGLDHPRDIRPYHFSQRTSPSDVVSLAQLYPALRPGE FT LLEGTDDPRFKQAWEMAQAESFAPLV" FT misc_feature complement(order(174778..174843,174865..174927)) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 175251..176201 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0474" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ8" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25918.1" FT /translation="MQYADRVIVRIVKDYCDASGVDVTLGLDGWLIVLSKGDARHFIYG FT YDFGLNSSVTHRLANDKAATADILAAAGIACVPHRLFMNHEHFKYVPSSGHWSAMLKMQ FT RAHPAGLVLKPNEGTCGHLVFKATTELELELAATTIFAANQNLAIAPYFDIAREVRVIL FT LDRVPMVVYEKKRPTIIGDGARSALQLLLDVVPAERLGAVLANLPAGHAALGAVVPAGA FT QFPLDWRHNLEFGAEPELIGDGELRDTCVAIAAEAARAIGLSFGAVDVVWTAQGPRVLE FT INSGVMIESLSRRFPGLAQQVYTRALDRVMQAMPA" FT CDS 176293..177294 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0475" FT /product="putative oxidoreductase" FT /function="InterPro IPR002085 COGs COG2130" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCJ7" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25919.1" FT /translation="MTATVNRQILLIEKPKEKLGPEHFRLAESPIPEPKDGEALVKVRY FT ISLDAANRAWMQGATYRAAVETDSVMPGGSVAEVVSSKAPGLVSGDLVFADTGWQDYAV FT LPAKHLAKLPKVEPMTHLLSVYGIAGLTAYFGLLDIGKPRAGETVVVSAAAGSVGSIVG FT QIAKIKGCRVVGIAGGKQKCDWLVNELGFDAAVDYKDGALFKALRAAAPNGIDVYFDNV FT GGDILEACLPQMNLKGRIACCGAVSQYDRTPSATGPRGIPGLIVVKRLIMQGFIVMDYM FT DQRDEAVAKLQEWVTSGKLKVQEDVIDGLENTPQALIGLLAGENRGKRMVKV" FT tRNA complement(177361..177437) FT /gene="tRNA-Arg5" FT /locus_tag="RNA_38" FT /product="tRNA_Arg" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 177648..178979 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0476" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002035" FT /db_xref="InterPro:IPR018705" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25920.1" FT /translation="MAFSRSIARFSRDRRGNIAVIFALVLVPLISAVGCAVDYSRANAL FT RSKLQAAADAASVGAVSRTSPAYVAAGAMSGDGVISSGADDALRIFNGNLNGLTGYTLA FT SSSATVTKASDVVTSQVTFSAQISTMFMKVVGMSAMAVGGTSTATASMPKYIDFYLLLD FT NSPSMGVGATPTDVSAMIAATANKSSDDHCAFACHDVNNKNNYYNLAKALGITTRIDVL FT RSATQQLMDTATATATYSNQFRMAIYDFGASAQTAGLRNLFSLSASLSSAKTAASAIDL FT MTVKGQNDNNDQDTSYTAIFPAINNEISSPGSGVSGSPQKYLFFVSDGVADEYNPSCLK FT PKTGNRCQSPINPALCKTLKDRGIKIAVLYTTYLNLPSNDWYKKWIAPFNAGPYGPSPN FT SEIAQNMEACASPGFYFEVSPTQGIAEAMNALFKKAVADARITS" FT sig_peptide 177648..177758 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.946) with cleavage site probability FT 0.745 atresidue 37" FT misc_feature 177705..177773 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 179113..179673 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0477" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009282" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25921.1" FT /translation="MGLLDILNGMQNGPRGPADPQDKSGGMSKFTMAILALLVWKAYKH FT MTSGQPQAAPANQPRPMPAPPPANTGGGWGDFLKGGLGGLVLGGAAGSVLSGGLGDLLR FT QLQHNGLGDAANSWVGHGPNQQIGPSDLANALGADQIDAMTRQTGMSRDELLNGLSRYL FT PDVVDQLTPDGRLPTDDEASRWI" FT CDS 179731..180027 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0478" FT /product="conserved hypothetical protein" FT /function="COGs COG2261" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25922.1" FT /translation="MGGLIWILVVGFVAGIIARVLSPGPNNPQGFVLTTVLGIAGAFLA FT TAIGQMIGHYGPNQGAGFITATVGAVSVLFIWNRLVARRVISDPGNRYPYDPR" FT misc_feature order(179740..179799,179818..179886,179914..179973) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(180081..180863) FT /codon_start=1 FT /transl_table=11 FT /gene="fabG1" FT /locus_tag="RPA0479" FT /product="possible 3-oxoacyl-acyl carrier protein FT reductase" FT /function="InterPro IPR002198:IPR002347 COGs COG1028" FT /EC_number="1.1.1.100" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCJ3" FT /db_xref="HSSP:1AE1" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25923.1" FT /translation="MSDGLNVIVTGSASGLGAATAKILAKDGARLVINYASSKDDAEKT FT AEECRKLGAAEVIVVQGDVAKDEDCKRIVEAAAPWGKLDALVNNAGTTKHVAHHLLDQL FT SADDFQRIYAINTVGPYQMVRAARELLVAGAKAAGRASAVVNVSSVAGISGIGSSIAYA FT ASKGALNTMTLSLSRALAPNIRVNAICPGYIDTPWFTKGRGAEEAKQVRDMVVSRVPLK FT IASTAEDIAELVCFLATPKSSSMTGELVRMDAGMHLAG" FT CDS 181124..182188 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0480" FT /product="possible acyl-CoA dehydrogenase" FT /function="InterPro IPR000104:IPR006090 COGs COG1960" FT /EC_number="1.3.99.3" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCJ2" FT /db_xref="InterPro:IPR006090" FT /db_xref="InterPro:IPR009075" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013764" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25924.1" FT /translation="MTETDNIVVETAEKIFADLADAQTINADKAETWKAPLWQALSESG FT MPLSWVPEEFGGSGASLAEGFGVLNAAGRAGLAVPLAETMLAGWLLAQGKIAAPEGAMT FT IAPAHPKDHLTLDADGRLSGRARSVPFAQHAQHIAVLAQSAAGAKIALVLASACRIDKG FT LGVGGDASDVVTFDKIAPIATASAPKDLDQTSLMLMGAVARSLQIAGALETLLDRSVTY FT ANERVAFEKKIGKFQAVQHNLAKLAGETSAALAAATSAADAISSADGFDDAVFLEASAA FT KIRCAEAAEKGAAIAHQVHGAIGFTAEHILHRFSLRALAWRDDFGNESHWAVELGRMVA FT KRGADNLWPLVASR" FT CDS 182215..183375 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0481" FT /product="putative acyl-CoA dehydrogenase" FT /function="InterPro IPR006089:IPR006091 COGs COG1960" FT /EC_number="1.3.99.3" FT /db_xref="GOA:Q6NCJ1" FT /db_xref="InterPro:IPR006089" FT /db_xref="InterPro:IPR006091" FT /db_xref="InterPro:IPR006092" FT /db_xref="InterPro:IPR009100" FT /db_xref="InterPro:IPR013786" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25925.1" FT /translation="MTAALRFDPIRLPPVCEELRKEVRAFLAEEIAAGTFDPNKPQRED FT SDAPEFSRRVGERGWLGMTWPKKYGGHERTFLERYVVTEEMRIANAPTRRFFVADRQSG FT PVLLKYAPEHIKMDILPRICRGELCFAIGMSEPNSGSDLFAAKTKATKTDGGYLINGSK FT IWTTSAHIADYMIAIFRTSPPTKENRRHGLTQFLVNMKSQGIKVNPIAQITGQYEFNEV FT VFTDVFVPDDHLLGEVDGAWKQATSELAYERSGPERFLETYYVLTELVRALGPDPDTRG FT AEGIGRLVAQLHTMRRMSVSVAGMLQAGKEPVVEASIVKDIGTIWEQQLPHRVRELAAF FT VDGEASNHATLDELTAFATKLAPKLTIQGGTTEVLRGIIARGLGLR" FT CDS 183409..184215 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0482" FT /product="probable short chain 3-hydroxyacyl-CoA FT dehydrogenase / enoyl-CoA hydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="1.1.1.35" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCJ0" FT /db_xref="InterPro:IPR001753" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6NCJ0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25926.1" FT /translation="MSSYTDIAVDKNGHVATIEIQRPPLNFFDISLIRQIANALDEIDA FT DPQVRATVLAAQGKAFCAGANFGDPARQEADPAAAKGDPADSLGEIGHLYYEAVRIFRA FT KKPIIAAVHGAAIGGGLGLAVSADFRVTCAEARFSANFTKLGFHPGFGLTVTLPELIGK FT NNAELMFYTSRRVTGEEAVQMGLANVLVPINEVRSGALKLAREIAECSPLGLLSTRATM FT RANLADRVMEATKHELAEQTRLRATEDFKEGVKATEERRVAHFKGR" FT CDS complement(184360..185124) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0483" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6NCI9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25927.1" FT /translation="MAPFLRLRQICLVTEPIEPAASRIATIMGLNICYRDPHVGKYGLE FT NVLLPVDATLLEIVAPTQPGTAAGRFLEKTQGRGGYMAIFCCDDPDARGRHAASLGVRT FT ANVIDHAPYHGVQLHPRDCRAAFIELNHTAGSDNIRGPYPPAGPDWAKAIRTDTTQALT FT AVEMQSPDPADLAAHWGRILELPVETDADGVAELRLPNATFRFVQGASEAMTALTFKVT FT APETVRAAAQAQGVPLTANGFRLAGVEFRLTT" FT CDS complement(185127..185915) FT /codon_start=1 FT /transl_table=11 FT /gene="paaG1" FT /locus_tag="RPA0484" FT /product="putative enoyl-CoA hydratase" FT /function="InterPro IPR001753 COGs COG1024" FT /EC_number="4.2.1.17" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCI8" FT /db_xref="InterPro:IPR001753" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:Q6NCI8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25928.1" FT /translation="MTDIVLQDLDRGLLTITMNRPDRRNALNQDMIRGLVEAAHRAKDD FT PEVRAVLLKGAGGTFCVGGDVKSMAAAGAPPPLEQKVANLRRGMEVSRILHQMPKPVVA FT QIDGAAAGAGLSMALACDLRVAGASAKITTAFAKVGLSGDFGGTYFLTQLIGAAKAREL FT YLTSPVLTAEQAQALGIVSRVVPDAEVESATRELALSLAQGPTVTLGYIKTNINNAESL FT SLEACFDAEALHHSRCAETADHKEAAAAFVEKRAPVFQGR" FT CDS complement(186092..187297) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0485" FT /product="possible urea/short-chain amide ABC transporter" FT /function="InterPro IPR001179 COGs COG0683" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:Q6NCI7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25929.1" FT /translation="MKPFRTTLLACLSIAAITAAQAQSQPPLKLGAILDMSGLYADITG FT TGSETAAKMAVEDFGGTVLGRKVEIIAADHLNKADLSANIARDMLDNQGVEAIIDVAAS FT ATALAAAEIAKSRNKIIMFSGPGSIRLSNEACGPYTVHYVFDTFAQANTTGLAAVKQGL FT DTWFFLSADYAFGQDLERDTTNVIKASGGKVLGSVKHPLNTSDFSSFLLQAQSSKAKVI FT GLANAGGDTINAIKQGAEFGITKGGQKISPLLAFISDIDSVGLETAQGLILAEAFYWDL FT NDETRAFSKRFMERTKRMPTSAQAGLYSETMHYLQAVKAAGTTDAAAVTKKMKEMPIND FT FFAKNGKIREDGRMVHDMYLFEVKKPSESKGRWDYYKLLATVPGDQAFQSLADSRCPLV FT KK" FT sig_peptide complement(187229..187297) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.834 atresidue 23" FT CDS 187714..188439 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0486" FT /product="Staphylococcus nuclease (SNase-like)" FT /function="InterPro IPR006021" FT /db_xref="GOA:Q6NCI6" FT /db_xref="InterPro:IPR006021" FT /db_xref="InterPro:IPR016071" FT /db_xref="UniProtKB/TrEMBL:Q6NCI6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25930.1" FT /translation="MQAGDAVAAGCLDLPAQGEGVVASVIDPRTLRLADGREVRLTGIE FT LAREQHDAEVAALSSLALGRRVSLHGADDGPDRYGRQWAFVGAEPGAELVQRRLLADGG FT ALVGIDAMPAECRQELLAAEAGARAAAVGIWMARDVIKNAANSGDMVTRIGRFTVIEGR FT ITSVREVGSTVYLNFGGRWTRGFAVTISRRIVGLFEAAGLAPKSLTGQRIRVRGWVEKR FT AGASMAVRDVGQIERAGGD" FT CDS 188451..189968 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0487" FT /product="conserved unknown protein" FT /function="InterPro IPR006025 COGs COG0501" FT /db_xref="GOA:Q6NCI5" FT /db_xref="InterPro:IPR001915" FT /db_xref="UniProtKB/TrEMBL:Q6NCI5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25931.1" FT /translation="MSSRVNWGAARRNFRKGRRQVAAWLLLGAALTLAGCGDPSRFETG FT PVTAAPSAKSVRPPVQSQAAEREHERILATYGGAYDDPKLEALISGIVDRLVAASDRPD FT LTYKVTILNSGAVNAFALPTGQLYVTRGLIALATDTSELSSVLSHEMAHVLAKHAAIRE FT DQARQAALVARVVTDMGNDPSMTALALAKTKLSMASFSRQQELEADGIGIGISARAQFD FT PYGAARFLTAMERNAALKANRGTGDSRTDFLSSHPATPERVSNAQNNARQYTAPQGGWR FT GERGERDREAYLNAIDNIVYGEDPSEGFVRGRRFLHPKLGFTFQVPDSFTLDNTAQAVI FT GLREGGNQAMRFDVVRVPAEQSLADYLNSGWMENVDKSSTEELTVNGFPTASVTARGEQ FT WQFRVYALRFGSDVYRFIFATRQRTAESDRNARETVNSFRRLSLDEIQAARPLRIKVIS FT VQPGDTVESLSHRMSGVDRPLERFRVLNGLDAHAQVKPRELVKIVID" FT sig_peptide 188451..188600 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.995) with cleavage site probability FT 0.924 atresidue 50" FT misc_feature 188511..188564 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT terminator complement(190024..190044) FT /note="TransTerm prediction, 98+%" FT CDS complement(190073..190735) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0488" FT /product="possible CarD-like transcriptional regulator" FT /function="InterPro IPR003711 COGs COG1329" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCI4" FT /db_xref="InterPro:IPR003711" FT /db_xref="UniProtKB/TrEMBL:Q6NCI4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25932.1" FT /translation="MKQPVAAAKPAAPAPARVEEPKKAVTQRQGFKANEFVVYPAHGVG FT QILAIEEQEIAGAKLELFVINFIKDKMTLRVPTAKVGNVGMRKLSDPALVKKALETLKG FT RARVKRTMWSRRAQEYEAKINSGDIVAIAEVVRDLYRSESQPEQSYSERQLYEAALDRL FT SREIAVVQHITETEAVKEVESQLAKSPRRGAKAEAEAEADADLDGDSDDEAVTDEAA" FT CDS complement(191432..191770) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0489" FT /product="ferredoxin II" FT /function="InterPro IPR000813:IPR001450 COGs COG1146" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCI3" FT /db_xref="HSSP:1AXQ" FT /db_xref="InterPro:IPR000813" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:Q6NCI3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25933.1" FT /translation="MTYVVTENCIKCKYTDCVEVCPVDCFYEGDNMLVIHPDECIDCGV FT CEPECPAEAIKPDTEPGLEKWLELNSEYAKTWPNLTQKKDAPADAKEFDGQAGKFEKYF FT SSEPGSGD" FT CDS complement(191845..192072) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0490" FT /product="conserved hypothetical protein" FT /function="COGs COG1188" FT /db_xref="GOA:Q6NCI2" FT /db_xref="InterPro:IPR002942" FT /db_xref="UniProtKB/TrEMBL:Q6NCI2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25934.1" FT /translation="MVRARTSAAALVERGHVRINGMRETSPGHGIKVGDVLTIALDRGV FT RVLKVVGFTERRGDAESVTGLYADLGMPRE" FT CDS complement(192145..195426) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0491" FT /product="possible MgpS, ATP-dependent helicase" FT /function="InterPro IPR001410:IPR001650:IPR001687 COGs FT COG0513" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCI1" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/TrEMBL:Q6NCI1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25935.1" FT /translation="MPNLYSEAFTADRVPGAGVTAVLGPTNTGKTHLAIERMVAHPSGL FT IGLPLRLLAREVYNKIVDKVGANAVALVTGEEKIKPSKPRYWVSTVEAMPRDLDVSFLA FT VDEIQIAADLERGHVFTDRILRRRGRDETLLLGAATMRPMIQRLLPGASIVTRPRLSQL FT EYAGDRKLTRQPRRTAIVAFSADEVYAIAELIKRQHGGAAVVLGSLSPRTRNAQVAMFQ FT SGDVDYLIATDAIGMGLNLDVDHVAFASDRKFDGYQFRRLTPAEFAQIGGRAGRATRDG FT TFGTTGRCAPFEPELVNALQNHSFEPVKMLQWRNAELDFASIGALQVSLAESPRHEALT FT RAPVAEDLRVLDHVARDAEVREIAQGKAAVERLWDVCQVPDYRKIAPAAHAELVITLYR FT FLMQKGRIPDSWFAAQVDQADRTDGGIDTLSARIAQIRTWTFVANRPDWLADPEHWQGI FT SRDVENKLSDALHERLTERFVDRRTSVLMRRLRENTMLNTEIGKTGEVIVEGHVIGRLD FT GFTFAPDAAEAGSDAKALQATAQKALAGEIDARAEKLSNAPDDQFILTSDGTIRWTGDA FT VARLVGSDDVLRPRLRIIADDRLAGAPREAVQTRLDLWLKTHVEKILGPLFELGKAEDV FT SGIARGIAFQLIESLGVLERAKIATEMKDLDQPSRATLRKYGVRFGAYHIYFPSLLKPA FT ARALASLLWAQKQDNVDLAALSSAQHLAGSGRTSFPADKALDRDAYRTLGYRLCGERAV FT RVDILERLADLIRPALAWREGASGEKPAGAFDGRSFVVTQAMTSLTGSAGEDFASILKA FT LGYRMERRPAPPPAPKAAETASPATEEAAATSDMSAEDQAILAGAIAFEPSPTAEGDVA FT EAASTVDEQPAADEPAAVDQPVATAAEPAAEPAAAETAEQPAADASEAPASEVTTAEAS FT SEAASAEAAPAAKAEPELVEVWRPGGRSDEHRPRHDRNRHRNRPQHGAPAGANEGESAE FT AKGDRSGGRRGKGEFRRDRRDQEGEGVRREASAEGRPPRERFKGRDKFQDKHQGGKGGR FT DNQGGGSHRQVHSSAPRERDRPMDPNSPFAKLAALKEQLTAGRKD" FT CDS complement(195729..196766) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0492" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCI0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25936.1" FT /translation="MANRELPEGAPRYADLYAPSSIWHHIKDVIGSDTNRSARCELTID FT GASAPGRTSFVNISSRHFANVIPAVIRYAGLGGLLAGAAVLTAAPVAAQGKLDARYEAS FT LAGIEVGKGAWVIQVDDDFYSASATGTTSGVMQAFSGGHGRGEAQGRVINGQLVPGNYM FT ASITGGKKTETIRITLANGNVKESSIEPEPPPDDDRIPVTDAHRRGVIDPMTASFLRVP FT GTGDVLSPDSCRVSTPIFDGRMRYDLRMEYKRTETVKAEKGYRGPALVCAVYFNPVSGY FT IPDRAAIKYLIKQRDMEVWLAPIAGTRVLAPFRLKIPTPVGNAMLEATQFISQATPPKS FT ASRAQ" FT CDS 196902..197207 FT /codon_start=1 FT /transl_table=11 FT /gene="rpmB, L28" FT /locus_tag="RPA0493" FT /product="50S ribosomal protein L28" FT /function="InterPro IPR001383 COGs COG0227" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCH9" FT /db_xref="InterPro:IPR001383" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCH9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25937.1" FT /translation="MSRRCELTAKGAQVGHKVSHSNIKTKRRFLPNLVNVTFLSDTLGR FT AVRLRVSTNALKSVDHRGGLDAYLLKAREAELSPKAVELKRAIAKKMAGEPVAAAS" FT terminator 197245..197268 FT /note="TransTerm prediction, 98+%" FT CDS 197496..200777 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0494" FT /product="sensor histidine kinase with PAS/PAC and Response FT regulator receiver domains" FT /function="InterPro FT IPR000014:IPR000700:IPR001610:IPR001789:IPR003594:IPR003660 FT :IPR003661:IPR004358:IPR005467 COGs COG0642" FT /db_xref="GOA:Q6NCH8" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000700" FT /db_xref="InterPro:IPR001610" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR013767" FT /db_xref="UniProtKB/TrEMBL:Q6NCH8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25938.1" FT /translation="MRVGAVAIAGAFMKLSTRLTLAMVALVLVTTAVLGFLNYQNVVDL FT VMPRALMRLHTHAQLNALLIETSLQNTHADAVGAQSSAALRDLLTARRDGLQSGGEEPA FT NWRKRIEARFIAEMVAKPSCAILRIIGPEDDGRELVRVDRRGPNNSIRAVPPSELARRG FT DRTYFKEGMALPPNRVAMSKVELNKTAAGLETPYVPTVRTMAPIDAADGTRLGLLVINT FT DLSGLLERIRESSDGSNIIYVVNADGDYLLHPDRSREFGFDIGKPSRIQDDFPRMSELL FT LLRKGGDTPTLVADSAGDRFGAGWDWAELPNGPRLAVVEMRPYVSLTSVQTAVRNSTIL FT GGTVAILVAMLMAFPLARSLTRPLVRITNSIVAFSSSGVPVKVKTGGGHEINMLAEAFT FT RMASESQRKAVALASEVEQRSRIAEVLQNTIDNMVDPVLVADANGMVILTNPAARETFG FT QLSGVGMLNTTRSFDRFDADGNPMAQDQSPLLRAYHGETIINFEFAVQPIGSARRSYLI FT ANGRPLRNETGEIQGAVMVYHDITKTKKAEDALRRSEQMSRAIIDTALDAFVQLDAQGR FT ITDWSPHAESMLGWSREEAIGQDFGELALPPDQTREIKTGYRRFIEAIEHDMSVIQGHR FT IEIEAVRRDGSPIALEVSMTALPVEGRFVVNVFMRDLTEKIAFEEQLRQSQKMESIGQL FT TGGIAHDFNNMLTVITGTIDIISDGVADQPHLAAIAKLISEAADRGAELTRLLLAFARK FT QPLRPDETEVNALLSGLQSLLRPTLGEPIEVETVLAPDTWSIYVDRGQLESALVNLAVN FT ARDAMPKGGKLTIETSNVVVDPDLGKRFGDLAPGDYVMIAITDSGCGIPETIRSKVFDP FT FFTTKEVGKGTGLGLSMVYGFIKQSGGHITLDSEEGQGTTFRLYLPRAQIQVDAEAAPA FT IEQNAVGGTETILVVEDDAMVRSYVNAQLKSLGYTTLSVGNAAAALSIGESDTAFDLLF FT TDVVMPGPMNGVQLAAEMIKRRPGLRVLYTSGYSENALIHNDRIDSDVLLLSKPYRRSD FT LARMIRRALAASQEVEAARSTTTTTTTTTAAEPAKPSRAAAARPA" FT misc_feature 197556..197624 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(200801..201949) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0495" FT /product="conserved hypothetical protein" FT /function="InterPro IPR000104:IPR001687:IPR006311" FT /db_xref="InterPro:IPR006311" FT /db_xref="InterPro:IPR014567" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q6NCH7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25939.1" FT /translation="MNAPRGEAGKQSDHTATDDSRAAAAAQDFATTTRRHLLAGGLSLG FT AAAGLTAFAPTLALAQTKPVEADELTPPAPRSIEVRARQIDHFDLRDRAHRQFGALQFR FT SGLILTSGFRGFGGLSALRLDPRGERFVAISDKATWFTGRIVYDGAAMSGLADVEAAPL FT LGPDGKPLRSRKWYDSESLAFDGGTAYVGFERVNQIVKFDFGRDGIRARGQPIAVPPAL FT RKLPNNKGIESLVMVAKPHPLAGTLIALSERGLDAERNTIGFLIGGKSPGQFSVRRTEN FT YDIADAALMHGGELLILERKFSWFEGVHIRIRRIALSTIVPGATVDGPSIFEADLGNEI FT DNMEGLDVHIDAGGAIVLTMVSDDNFSMLQRTLLLQFTLEAD" FT misc_feature complement(201773..201838) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(201974..203878) FT /codon_start=1 FT /transl_table=11 FT /gene="cobT2" FT /locus_tag="RPA0496" FT /product="cobT protein" FT /function="InterPro IPR002035" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR002035" FT /db_xref="InterPro:IPR006538" FT /db_xref="UniProtKB/TrEMBL:Q6NCH6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25940.1" FT /translation="MSTTTNSKLRTGSKEAPTEPFKRAVTSCLRAIAKAPELEVTFAAE FT RPGLAPGKARLPEPARKMSKRDAAIVRGHADSIALKLACHDPKVHRKLMPGNPQARGVF FT EAVEQARVEALGARRMAGVAKNLTAMLDDHFHRGKFDEITDRADAPLSDALAMLVRERL FT TGLAPPTAAKKLVDLWRPVLEDKLGARLDQLEHFADNQAKFGDVIHDMLDALELGDDRD FT TETDEDENQDDKQEGENDQSGAEGEPQGEAAQEMSAEQAEATSDEVSDSQMESAQASTS FT DAFDDSELGEDETPGEATRPHNRGANEPRGPEYHAFAPKFDEIVAAEDLCDHDELERLR FT SYLDKQLAHLQGIVARLANRLQRRLMAQQNRAWDFDLEEGILDPARLSRVVIDPFHPLS FT FMSEKEATFRDTVVTLLLDNSGSMRGRPITVAATCADILARTLERCGVKVEILGFTTRA FT WKGGQSREAWLAAGKPANPGRLNDLRHIIYKSADAPWRRARKNLGLMMREGLLKENIDG FT EALDWAHKRLLGRPEQRKILMMISDGAPVDDSTLSVNPGNYLERHLRHIIEEIETRSPV FT ELIAIGIGHDVTRYYRRAVTIVDAEELGGAITEKLAELFSETATPAATPGPRRRRLHS" FT CDS complement(203875..204285) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0497" FT /product="GCN5-related N-acetyltransferase" FT /function="InterPro IPR000182 COGs COG0454" FT /db_xref="GOA:Q6NCH5" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6NCH5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25941.1" FT /translation="MPSVSVDRTYGKTKKAVLDGLKAYNKERWGRQKYKRFAVSLRNGE FT QIVGGVVGEMWSTVLFIQYFWIEQAYRGKRHGRKLLAAIEDEARKFGATRSYLDTMSFQ FT APGFYSTCGYKKFGVIDGYPDDVTRHWFMKAL" FT CDS complement(204290..205285) FT /codon_start=1 FT /transl_table=11 FT /gene="cobS2" FT /locus_tag="RPA0498" FT /product="cobS protein" FT /function="InterPro IPR001687:IPR006537 COGs COG0714" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCH4" FT /db_xref="InterPro:IPR006537" FT /db_xref="InterPro:IPR011704" FT /db_xref="UniProtKB/TrEMBL:Q6NCH4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25942.1" FT /translation="MTAATTTAPEITGLPDMKVSVRQVFGIDSDLEVPAYSEVDPHVPD FT VDPDYRFDRATTLAILAGFAKNRRVMVTGFHGTGKSTHIEQVAARLNWPCVRVNLDSHI FT SRIDLVGKDAIVVRDGKQVTEFRDGILPWALQHNVALVFDEYDAGRPDVMFVIQRVLEV FT SGRLTLLDQNKVIKPHPAFRLFATANTIGLGDTSGLYHGTQQINQGQMDRWSIVTTLNY FT LPHDEEVEIILAKAKHYRNAEGRDIVNKMVRLADLTRNAFANGDLSTVMSPRTVITWSE FT NADIFGDIGFAFRVTFLNKCDELERPLVAEFYQRCFNAELPESSVNIAMS" FT CDS 205565..206182 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0499" FT /product="DedA family" FT /function="InterPro IPR000252 COGs COG0586" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:Q6NCH3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25943.1" FT /translation="MSSLLDSLVHLAASHSGLAYLALFMAALLEAVPVVGSLVPGSTVI FT LALSALIPGGELSLAGVLASAIAGALIGDGAAYWVGHRAQRSILSAWPLSNYPYVVAQA FT EAFFVRYGTWAVLFGRFVPPIRAFVPVTAGALQMTPQRFFAVDVPAILLWAPAHVLPGV FT VAATALEHNHATLHHWLPVLAGVAGTLLLGLWAYRRWRGTPA" FT misc_feature order(205622..205717,205736..205804,205862..205930, FT 205991..206059,206087..206155) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(206247..206891) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0500" FT /product="Heat shock protein DnaJ, N-terminal" FT /function="InterPro IPR001623 COGs COG2214" FT /db_xref="GOA:Q6NCH2" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR015609" FT /db_xref="UniProtKB/TrEMBL:Q6NCH2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25944.1" FT /translation="MPIDSSKFFDKIRVKPRAAEAAREAVREQVRMCDAPGCTSRAAHR FT APKGRGYEKDYWHFCLNHVREFNQGYNFFEGMNPDDVARYQKDALTGHRPTWKMGQNGA FT KSRARSPEDLEGAADPFNVFNEFTGSRRRRRGPDPADEARAEPRKVFNAERKALQVMGL FT DSDATLEVVKAKYKALVKQHHPDANGGDRSTEDRLIEIIKAYNYLKTVVRS" FT CDS 207012..207281 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0501" FT /product="BolA-like protein" FT /function="InterPro IPR002634 COGs COG0271" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR002634" FT /db_xref="UniProtKB/TrEMBL:Q6NCH1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25945.1" FT /translation="MGTQDTITQKLREAFTPESLAVIDESNLHEGHAGHSGRSETHFRV FT NIVSAAFAGKSRVDRHRMVNDLLAPELKGGVHALAIKAKAPGEA" FT CDS complement(207299..208660) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0502" FT /product="probable HlyC/CorC family of transporters with 2 FT CBS domains" FT /function="InterPro IPR000644:IPR002550:IPR005170 COGs FT COG1253" FT /db_xref="GOA:Q6NCH0" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR002550" FT /db_xref="InterPro:IPR005170" FT /db_xref="UniProtKB/TrEMBL:Q6NCH0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25946.1" FT /translation="MNSTLSNVLIAVLLLIANAFYVAAEFALVRSRGFRIKAMVEKQRF FT GAELVQHILGNVEAYLACCQLGITMASLGLGWVGEPTVSALLAPVLQPMGLSESAQHFI FT AFLGGFLFFSSLHIVIGEQVPKTLAIRQPEPVSQWIAYPLHISFILLYPLNWLLNQASR FT GVLKLLGVEENSEHEILTDVEIEGLVGESAEHGKIESGEAEYIQNVFRFGELVVSDVMV FT HRTAMVTVNADQPSEQLVKEVLATEYTRVPLWRDKPENIVGVLHAKDLLRALRAADGDA FT SKLDIGKIALQPWFVPEMRPVSEQLKAFRTRKTHFALVVDEYGEVEGMVTLEDILEEIV FT GDISDEHDVVVAGVRTQPDGSVVVDGSVPIRDLNRAMDWNLPDEEATTVAGLVIHEARS FT IPDRGQNFTFHGFRFRVLRRERNRITALRISPVPRDGEADLIEKKSRKTRAGSV" FT misc_feature complement(order(208187..208252,208298..208354, FT 208574..208630)) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT sig_peptide complement(208589..208660) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.999) with cleavage site probability FT 0.497 atresidue 24" FT CDS complement(208708..209853) FT /codon_start=1 FT /transl_table=11 FT /gene="aroB" FT /locus_tag="RPA0503" FT /product="putative 3-dehydroquinate synthase" FT /function="InterPro IPR002658:IPR006265 COGs COG0337" FT /EC_number="4.2.3.4" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCG9" FT /db_xref="InterPro:IPR002658" FT /db_xref="InterPro:IPR016037" FT /db_xref="InterPro:IPR016303" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCG9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25947.1" FT /translation="MNAPQKHSAPITVEVALGDRAYEIVIGRDVIASLGERIAKLRPGA FT RTAIVTDRTVAKTWLKRTEEVLDQAGIAHASVIVGEGESSKSYAGLEQVCEALIAAKIE FT RNDLVIALGGGVIGDLAGFSASLLRRGVDFVQVPTSLLAQVDSSVGGKTGINSPQGKNL FT IGTFHQPVLVLADTAILDTLSPRQFRAGYAEVAKYGALGDEAFFAWLEANHAELFSGGA FT AREHAVATSCRAKAAIVARDERETGDRALLNLGHTFGHALEAATGFSDRLFHGEGVAIG FT MVLAAEFSAERGMMPATDAERLAKHLAEVGLPTRLQDIAGFTQEGLADADRLMALMAQD FT KKVKRGELTFILMEGIGRAVIASKVEPAPVRDFLQRKLAQA" FT CDS complement(209864..210475) FT /codon_start=1 FT /transl_table=11 FT /gene="aroK" FT /locus_tag="RPA0504" FT /product="putative shikimate kinase" FT /function="InterPro IPR000623:IPR001687 COGs COG0703" FT /EC_number="2.7.1.71" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCG8" FT /db_xref="InterPro:IPR000623" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCG8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25948.1" FT /translation="MPRMSETVPTAAAGRSPQEAEIVAALGDRPVVLIGMMGAGKSTVG FT RRLALRLGLPFLDADTEIESAAAMTIPEIFETHGEPHFRDGEARVISRLLDGGTKVLAT FT GGGAFMREETRDRIREKAISMWLEAEADVILRRVKRRADRPLLKTPDPAGTIARLIAER FT YPLYREADITIASRDVPHEKIVDECVAALHDYLCAAPPQP" FT CDS 210605..210751 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0505" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCG7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25949.1" FT /translation="MPTLFRFLTVIGVVGGIIYGTIFALANFVGPNSREMTVTIGPDKF FT LKK" FT misc_feature 210623..210691 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 210768..211784 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0506" FT /product="site-specific integrase/recombinase XerD" FT /function="InterPro IPR002104:IPR004107 COGs COG0582" FT /db_xref="GOA:Q6NCG6" FT /db_xref="HSSP:1A0P" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR011932" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q6NCG6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25950.1" FT /translation="MRRPRTISRAAPLREPEAQAATLRPASYSDAGLTELFLDMIAAEQ FT GASANTLDAYRRDLADLSHFLSRRRLSIGSADTAALRSYLADLDNRGFATSSVARRLSA FT LRHLFRFLLSERIRADDPAAILAGPKRGRSLPKVLSIADVDQLLACARQEIDAAEGGAR FT LRAARLNCLLEVLYATGLRVSELVSLPLSAARRDARMIVVRGKGDKERLVPLNAGAKQA FT MARYLEEMAAAKAPKDGPAPKWLFPSFGESGYLTRQHFARDLKDLAARAGLAPRLVSPH FT VLRHAFASHLLHNGADLRIVQTLLGHSDISTTQIYTHVVEERLKSLVRDLHPLGEGR" FT misc_feature 210768..211784 FT /note="IS element" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(211791..212366) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0507" FT /product="possible cytochrome b561" FT /function="InterPro IPR000516 COGs COG3038" FT /db_xref="GOA:Q6NCG5" FT /db_xref="InterPro:IPR011577" FT /db_xref="InterPro:IPR016174" FT /db_xref="UniProtKB/TrEMBL:Q6NCG5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25951.1" FT /translation="MTASDDAPISTDRFMFGRAQRWLHWSMALLIFAAIGLGIVAAYYP FT SGQQPRQGLLELHKSIGFTILALLVVRIVLRLISGEPPYRRPLGHLTEMAARAGHLALY FT GLMLLMPLSGYLFSGAGGYSLPWFGLFQWPRLVPRDHALSEWGQVLHDRGAWVLGAVLA FT LHLAAVCWHQFVKRDEVLSRMTGRASES" FT misc_feature complement(order(211842..211907,211998..212063, FT 212127..212192,212238..212303)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 212630..213592 FT /codon_start=1 FT /transl_table=11 FT /gene="accA" FT /locus_tag="RPA0508" FT /product="acetyl-CoA carboxylase carboxyltransferase alpha FT subunit" FT /function="InterPro IPR001095 COGs COG0825" FT /EC_number="6.4.1.2" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCG4" FT /db_xref="InterPro:IPR001095" FT /db_xref="InterPro:IPR011763" FT /db_xref="InterPro:IPR020582" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCG4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25952.1" FT /translation="MSGPMRSYLDFEKPVAELDSKIDELRTLAASGSDIHEEIEKIEEK FT AQQALQDLYAALTPWQKTQVARHPQRPHCVDYIEGLIAEFTPLAGDRKFGDDEALVGGF FT GRFRGEAVCVIGQEKGSTTETRLRHNFGMARPEGYRKAVRLMEMADRFDLPVLSLVDTA FT GAYPGIGAEERGQAEAIARSTDACLQLGVPNVALVIGEGGSGGAIAIATANKVLMLEHA FT VYSVISPEAASSILWRDGTKAQEAANSMKITAQDLLKFGVIDQILAEPKGGAHRDPEAM FT IATAGDAIAAAFAELKGQGRDAIRAKRRQKFLDIGRKLA" FT CDS 213925..215400 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0509" FT /product="conserved hypothetical protein" FT /function="InterPro IPR003993 COGs COG3034" FT /db_xref="UniProtKB/TrEMBL:Q6NCG3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25953.1" FT /translation="MGCGFAGRRGSFVVKKSPLVRALMLTAALATMPLLAGCNSDQMAL FT ATNAKANQPVSPKLVAAMQEKNMDLQSPILVRLFKQEAELEVWKQDRTGVFQLLKSYPI FT CRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQL FT MVHGDCSSRGCYAMTDEQIAEIYALGRESFFGGQRAFQLQAYPFKMTPVNFAKHRNNPN FT MPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVFDAAPPPGSSRPLQFNASAKCPTYEVRP FT DIAEAVREKDKQDNIRIAELVAKGTPVARLNTGIDGGMNHVFASKIPDASTGLSEVPED FT KSLAVASFDRAPGTIPPTVNPPRPSDNLLVAAPAESSASVAKARVASASKDDIGGLLAG FT SRKPGNESTASARPAPSAPVSTAARHEPAPRPQGGAPKAAETKQAAASRPPLKPSVDAE FT TTSSAPARPSGMISGGAPVVSSNSFDSRFSAFR" FT sig_peptide 213925..214080 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.767) with cleavage site probability FT 0.250 atresidue 52" FT CDS complement(215610..218450) FT /codon_start=1 FT /transl_table=11 FT /gene="secA" FT /locus_tag="RPA0510" FT /product="preprotein translocase secA" FT /function="InterPro IPR000185:IPR001687:IPR004027 COGs FT COG0653" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCG2" FT /db_xref="HSSP:1OZB" FT /db_xref="InterPro:IPR000185" FT /db_xref="InterPro:IPR004027" FT /db_xref="InterPro:IPR011115" FT /db_xref="InterPro:IPR011116" FT /db_xref="InterPro:IPR011130" FT /db_xref="InterPro:IPR014018" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCG2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25954.1" FT /translation="MIGALARKLFGSANDRRVKGYQTRVAAINALEPEVAALSDEALRA FT RTAEFRAELAAGKTLDDLLVPAFATVREAAKRTLGQRHFDVQLIGGMVLHEGDIAEMKT FT GEGKTLVATLAVYLNALAGKGVHVVTVNDYLAKRDSGWMGQIYGFLGMTTGVIVHGLDD FT AQRQAAYACDITYGTNNEYGFDYLRDNMKYRLEDMVQRGHNFAIVDEVDSILIDEARTP FT LIISGPLDDRSDFYNTIDTFIPRLDKSDYDVDEKQRTVTLTEAGMEKIETLLRDAGQLR FT GESLYDVENVSVVHHVNQALRAHALFQRDKDYIVRNDEVVIIDEFTGRMMQGRRYSEGL FT HQALEAKEHVTVQPENQTLASITFQNYFRMYDKLAGMTGTASTEADEFFDIYKLEVVEI FT PTNLPIARLDEDDEVYRTQQEKYAAILAEVERANKRMQPVLVGTASIEKSEVLAEYLKK FT NGYKQIDFTDPKGMDKLYAAARAGKPAKLFAVLNARFHEQEAYIVAEAGVPGAITIATN FT MAGRGTDIKLGGSLEMRIQQEAAHITDEAERAAKITEIKADIERFRDIVLKAEDEIEIE FT PAKGNKPAKTAKRPGGLYIIGSERHESRRIDNQLRGRSGRQGDPGRSKFFLSLEDDLMR FT IFGSDKLDTMLTRLGLKEGEAIIHPWINKALEKAQQKVEARNFDIRKNLLKFDDVQNDQ FT RKVIFDQRIELMKEDSVAETVTDMRHTYIEDLVAKYVPEHAYAEQWDVAGLKAEVERVV FT GLDIPVDEWAKEEGIADEELITRLERVFDEHMAAKVGQWGSDVMRYAEKSILLQTLDHL FT WREHLVMLDHLRQVIGLRGYGQRDPLQEYKSEAFNLFQEMSSHLREAVTAQLMRVEIIP FT PDQPQELPPMEVHKMDPDTGQDEMALANVTLAPAQTTDKADRDPNKPETWGKVGRNEDC FT PCGSGKKYKHCHGRYA" FT CDS 218793..219728 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0511" FT /product="PpiC-type peptidyl-prolyl cis-trans isomerase" FT /function="InterPro IPR000297 COGs COG0760" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCG1" FT /db_xref="InterPro:IPR000297" FT /db_xref="UniProtKB/TrEMBL:Q6NCG1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25955.1" FT /translation="MTPASNAVTSGLRAGLLSAAVTGCLAFALLAAPAARAQDANPVLA FT KVNGAEIRQSDVDLAEQELGPSLAQLDPASRKENVLAFLIDMKIVAKAAEDKKIQDNAD FT FKKRLDFARNRLLMDDVLAAEGKAATTDEAMKKVYDEAAKQISGEQEVHARHILVETED FT EAKAVAEELKKGADFAELAKKKSKDPGASDGGDLGFFTKDQMVPEFSAAAFALEPGKIS FT DPIKTQFGWHIIKVEEKRNRKPPSFDQVKAQIEQYVTRKAQSDYVSKLRQAAKIERLDQ FT PAAKPDAAKPADAAKPADAAKPATPAPAKK" FT sig_peptide 218793..218906 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.843 atresidue 38" FT misc_feature 218826..218894 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(219821..222544) FT /codon_start=1 FT /transl_table=11 FT /gene="mutS" FT /locus_tag="RPA0512" FT /product="DNA mismatch repair protein mutS" FT /function="InterPro FT IPR000432:IPR001638:IPR001687:IPR002863:IPR005748 COGs FT COG0249" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:P61670" FT /db_xref="InterPro:IPR000432" FT /db_xref="InterPro:IPR005748" FT /db_xref="InterPro:IPR007695" FT /db_xref="InterPro:IPR007696" FT /db_xref="InterPro:IPR007860" FT /db_xref="InterPro:IPR007861" FT /db_xref="InterPro:IPR016151" FT /db_xref="UniProtKB/Swiss-Prot:P61670" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25956.1" FT /translation="MTIRPDIALPPDAAPPPEAPAKMSPMMEQYHEIKAANPGLLLFYR FT MGDFYELFFEDAEIASRALGITLTKRGKHLGADIPMCGVPVERSDDYLHRLIALGHRVA FT VCEQTEDPAAARARKSVVRRDVVRLITPGTLTEDTLLDARANNYLLAIARARGSAGADR FT IGLAWIDISTGEFCVTECSTAELAATLARINPNEAIVPDALYSDTELAPTLRELAAVTP FT LTRDVFDSATAERRLCDYFAVATMDGLAALSRLEATAAAACVTYVDRTQLGKRPPLSPP FT AREATGSTMAIDPATRANLELTRTLAGERRGSLLDAIDCTVTAAGSRLLAQRLAAPLTD FT AATIARRLDAVEAFAVDSGLREQIRSSLRAAPDMARALARLSLGRGGPRDLANLRDGIR FT AADEVLVQLAQLASPPQEIASAMAALQRPSRELCAELGRALADDLPLLKRDGGFVREGY FT EPALDETRKLRDASRLVVASMQARYADDTGIKALKIRHNNVLGYFVEVSAQHGEKLMAP FT PLNATFIHRQTLAGQVRFTTAELGEIEAKIANAGDRALGLELEIFDRLAGSIDAAGDDL FT RAAAHAFALLDVATALAKLASDDNYVRPEVDESLAFAIEGGRHPVVEQALKRAGEPFIA FT NACDLSPGPAQKNGQIWLLTGPNMAGKSTFLRQNALIALLAQVGSFVPAIRARIGIVDR FT LFSRVGAADDLARGRSTFMVEMVETAAILNQASERALVILDEIGRGTATFDGLSIAWAA FT IEHLHEQNRCRSLFATHYHELTALSAKLPRLFNATVRVKEWRGEVVFLHEVLPGSADRS FT YGIQVAKLAGLPPSVVSRAKAVLAKLEANDRGQPKTLIDDLPLFAITARAPAEAAPPSE FT AEQLIDAVKALHPDEMTPREALDALYALKAKLPKAD" FT CDS 222720..223928 FT /codon_start=1 FT /transl_table=11 FT /gene="pcaF" FT /locus_tag="RPA0513" FT /product="putative acetyl-CoA acetyltransferase" FT /function="InterPro IPR002155 COGs COG0183" FT /EC_number="2.3.1.9" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCF9" FT /db_xref="HSSP:1AFW" FT /db_xref="InterPro:IPR002155" FT /db_xref="InterPro:IPR012793" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR020610" FT /db_xref="InterPro:IPR020613" FT /db_xref="InterPro:IPR020615" FT /db_xref="InterPro:IPR020616" FT /db_xref="InterPro:IPR020617" FT /db_xref="UniProtKB/TrEMBL:Q6NCF9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25957.1" FT /translation="MADVFVCDAVRTPIGRYGGSLAKVRTDDLAAVPIKALMAKHPDMD FT WSAVDEVFFGCANQAGEDNRNVARMAALLAGLPDSVPGQTLNRLCASGLDAVGAAGRAI FT RGGEIDLAITGGVESMTRAPFVQGKATEAFARSADIFDTTIGWRFINPLMKQQYGVDSM FT PETGENVAEEFQISRADQDAFAIRSQQRAGAAIAAGYFAEEIAPVTYAGGKAGPITVDK FT DEHPRPETTLEGLAKLKPIVRNPGTVTAGNASGVNDGAAALLIASEAAVKKYGLTPRAK FT ILGLASAAVPPRIMGIGPVPATRKLMERLGLKISDFDLIELNEAFASQGIACLRQLGVA FT DDADFVNPHGGAIALGHPLGMSGARLALTAVHGLEKRGGKLALATMCVGVGQGVAMAIE FT KLN" FT CDS complement(224107..225669) FT /codon_start=1 FT /transl_table=11 FT /gene="FarB" FT /locus_tag="RPA0514" FT /product="putative efflux pump protein FarB" FT /function="InterPro IPR001064:IPR004638:IPR005828:IPR007114 FT COGs COG0477" FT /db_xref="GOA:Q6NCF8" FT /db_xref="InterPro:IPR001411" FT /db_xref="InterPro:IPR004638" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6NCF8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25958.1" FT /translation="MAGAAQSHAVPGFRRNMVTICAMTATIMQALDTTIANVALPYMQG FT SLSASQDQINWVLTSYIVAAAIMTAPVGWIANRFGRKRIFIICSAGFTIASVMCGLAQD FT ITQMVVFRLLQGVFGAALVPLSQAVMLDSYALHERAKAMSIWGMGVMMGPIMGPSLGAW FT LTETYSWHWVFFVNLPFGAITVLGLAMFMDETDKNQELKFDWFGFAALAVGIGAMQLAL FT DRGEQLDWFNSPEIIIESIVSVVGFYYFFAHSFTTERPFIQFAIFKDRNFVGGVVFMTV FT MGLVLFSTMALSSPFLQNVEGYPIMTAGLLLASRGCGTFVAMMIVGRIMRYIEARTLIA FT TGLSLTCASLYVMTGWTDQTSVSSVVVTSIIQGFGFGLVFVPLSTVAFMTLPGQLRTDG FT TAMLTLVRNVASSVGISVVIAKLSSGTTTAHAILTEHINPFNNALQMPNVTGMIDLSTT FT TGKAMMDAIVTMQAQIIAFSHDYAMVMFLTAAAVPMAIIIGSTKAALRKQSEAPADHAA FT VME" FT misc_feature complement(order(224170..224226,224368..224433, FT 224494..224559,224605..224670,224692..224757, FT 224788..224853,224914..224964,225004..225054, FT 225094..225159,225175..225240,225277..225342, FT 225355..225420,225442..225507,225553..225618)) FT /note="14 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(225673..226842) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0515" FT /product="possible efflux pump protein FarA" FT /function="InterPro IPR006143 COGs COG1566" FT /db_xref="GOA:Q6NCF7" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q6NCF7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25959.1" FT /translation="MAEPALKFPIEQKEPAGDPAVATSGGPRRGIGGTLRRYRRPLLLI FT VLPLVALIGGVAFYLEGGRYVTTDDAYVGAQKVLITPDVAGKIVEVTVKEGQRVQPGDE FT LFQIDPVPFRLAVAQAQAKLADAKTSHANLVANVKLYGQTIDLVNAGIALKQRDVERKT FT SLVQSRAGSQLDLDNSTAALVTAQAQLQLVKQQQSTALNQLLGDPELPLEKFPAYAQAK FT AALDDAERNLRLSTVRAPMSGTATQVDNIQLGRFVAAGTPVFSVIDTTQPWVDANPKES FT DFTYVAVGQTVTLDVDAFPDHQFKGRVSSLSPGTGAQFAVLPPQNATGNFVKVVQRVPL FT RIALDETDPMIKRLKAGMSVNVAIDTHHRRSLAGLLGFGHAAAATPEHN" FT misc_feature complement(226663..226719) FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS complement(226835..227320) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0516" FT /product="transcriptional regulator, MarR family" FT /function="InterPro IPR000835 COGs COG1846" FT /db_xref="GOA:Q6NCF6" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NCF6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25960.1" FT /translation="MTRGPEDQNFIFAFAEAQRLLRAYADKQASRHGITRAQWAVLAKV FT ERAEGLKQSELAEQMELQPITLTRLIDKLCDHGWLERRSDDSDRRCKRLYLREAARPLL FT GKLAGLRAELTDTALAGLTPEDAQRLVRQMQIIKENLRGAIQHHCHREEKRREEHYG" FT CDS 227510..228007 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0517" FT /product="transcriptional regulator, Fur family; probable FT zinc uptake regulator ZUR" FT /function="InterPro IPR002481 COGs COG0735" FT /db_xref="GOA:Q6NCF5" FT /db_xref="InterPro:IPR002481" FT /db_xref="UniProtKB/TrEMBL:Q6NCF5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25961.1" FT /translation="MGPMTALKPTFPAPGHDHDRCSAEGLEHAERVCAGRSQNLTPIRR FT QVLRALLSSHRPLGAYEVIEELARVMPRPAPITVYRALDFLMQNGLVHRIESRNAFLAC FT GHDHGDAATVAFLICECCGSVAEVPASEVTQRLNEAARQTGFTPKMSVVEITGVCGHCQ FT AA" FT CDS 228172..229095 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0518" FT /product="Permeases of the drug/metabolite transporter FT (DMT) superfamily" FT /function="InterPro IPR000620 COGs COG0697" FT /db_xref="GOA:Q6NCF4" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q6NCF4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25962.1" FT /translation="MGRPLSAGAIALMLLCCLSWGFNQIAVKLVLPDIPPFLQAAIRSA FT GALIVILIIATSRRVKLFQRDGTLRAGLFAGVLFGLEFVLIYHGLTLTTASRAVVFLYT FT APFFVALGSYRLLGERLRRMQWAGLALSFAGVALAIGVPQADVDASVLLGDLLLVGGGA FT LWAATTLIVKGTRLQRAPAEKGLAYQVAISVPILTGAALLSGETITKMPSTLSLGLMAY FT QTIWVVGLTFLLWFGLVKTYSASKLSAFTFITPLFGVAAGYLIMHDPLTPAFGAAAVLV FT IAGLYLVNRPAPVPAPNDPLLNVTKT" FT sig_peptide 228172..228237 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.980) with cleavage site probability FT 0.434 atresidue 22" FT misc_feature order(228184..228252,228280..228339,228376..228444, FT 228454..228522,228547..228606,228619..228687, FT 228724..228792,228820..228888,228901..228969, FT 228979..229038) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 229079..230404 FT /codon_start=1 FT /transl_table=11 FT /gene="gcpE" FT /locus_tag="RPA0519" FT /product="gcpE, Essential bacterial protein, involved in FT density-dependent regulation of peptidoglycan biosynthesis" FT /function="InterPro IPR004588:IPR006705 COGs COG0821" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCF3" FT /db_xref="InterPro:IPR004588" FT /db_xref="InterPro:IPR011005" FT /db_xref="InterPro:IPR016425" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCF3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25963.1" FT /translation="MSPKPDIRTAMNKLENPLRDDVAGPAPRHQTTQVMVGDVAVGGGA FT PIVVQSMTNTDTADVEGTIKQIAALARAGSEMVRITVDREEAAAAVPHIRDGIRKLGLT FT TPIIGDFHYIGHKLLAEYPACAEALDKYRINPGNVGFKNKRDTQFADIVEIAIKNNKAV FT RIGANWGSLDQELLTKLMDENAASANPRDVRAVTREAMVQSALLSAARAEEIGLPKNKM FT ILSAKVSAVQDLIAVYQDLASRSDYAIHLGLTEAGMGSKGIVASSAALGILLQQGIGDT FT IRISLTPEPGGDRTREVQVGQELLQTMGFRTFVPLVAACPGCGRTTSTTFQELARSIQD FT FIRDEMPEWRSRYPGVENLNVAVMGCIVNGPGESKHANIGISLPGTGETPAAPVFVDGE FT KFRTLRGENIAADFKALVIDYIEQRYGATPKPDAAQMVPAAE" FT CDS complement(230647..232299) FT /codon_start=1 FT /transl_table=11 FT /gene="nha" FT /locus_tag="RPA0520" FT /product="possible sodium/hydrogen antiporter" FT /function="InterPro IPR004705:IPR006153 COGs COG0025" FT /db_xref="GOA:Q6NCF2" FT /db_xref="InterPro:IPR004705" FT /db_xref="InterPro:IPR006153" FT /db_xref="InterPro:IPR018422" FT /db_xref="UniProtKB/TrEMBL:Q6NCF2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25964.1" FT /translation="MQAVAGRFTQNQRGDVEAKFQIFLTLLAVLAGTALLARRVNIAPA FT ILLLIAGITLAFIPGMPAIELPPDLILLLVLPPLIYSASVAMSWREFCANLRAIGLLAI FT GCVIFTACAVAAASHYLIGLPWSVGFLLGAIVAPPDVVAPLAIARKLGLPRRIVVVLEG FT EGLANDATALILYRFAVAAIMTGAFSLTKASGTFVAIMAGELAFGVAVGWLSLRARHWV FT RDPQIEITLSLLTPYIAYWIPEHHGGSGVIATVACGLYISWNGPLLISAATRLQGIFFW FT DLVIYLIEGMLFLLTGFQLRALLERSKEFAFGDILSATLLVAAIVIAARFIWVYPAFYL FT PRFLSRRLRASDPYPSWRTVFVIGFTGVRGAVSLAAALALPYALPGGETFPYRDLILFV FT TFGVILITLVGLGLTLPAVVKLLGVTRVGHREQIAEHDDEITARREALAAAQASLKKIT FT DNRELTDEVLKLLHARHQTRASLLPDPIGSPEHEASAVGIALVRELIAVERKFIHAQLR FT AGKITDEARRRIERDLDLEEASLANRESGPAPL" FT misc_feature complement(order(231049..231114,231160..231225, FT 231289..231354,231400..231465,231487..231552, FT 231652..231717,231856..231921,231937..232002, FT 232024..232089,232102..232167,232189..232239)) FT /note="11 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 232482..234191 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0521" FT /product="putative diguanylate cyclase FT (GGDEF)/phosphodiesterase (EAL)" FT /function="InterPro IPR000160:IPR001633 COGs COG2200" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q6NCF1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25965.1" FT /translation="MGVVSVIRTADLLEPQASGNAPGGAADHDPSHRTAQLTLAAFMAI FT DIGLALISPEGEIVMTNPMFDLAFGAIPHEQLLSRFGFDACREGGKVARPAIFPGDRIY FT WVDITSFPDGWLISAADISERLRQGIVGAELARTDRLTQLANRLVFHERLADLLAQPAD FT VRRDAAVLTIDLDRFKAINDSLGRNIGDALLCLVAKRISSALTPSDVLARIEADEFGVI FT QVGRDQPDAAVILAKRLVDLLSRPYLLEGQLINVSAFVGIALPIDDELDVDGVLKNADL FT ALHRAKQERYAGYRVFESAMDESMRARRALETDLRRALALREFSLVYQPQVNLQSRRVA FT GFEALLRWRCPRRGPVSPLDFIPIAEETGIIGPIGEWVLRTACRDAASWPGDYTVAVNI FT SAIQFTNRSLVATVVSAIADSGLDPRRLELEITESVMLDARGNALAVLQQLRGLGVRVS FT LDDFGTGYSSLGYLRSFPFDKIKIDQSFVREASDDRGNRAIVRAIASLGASLGMATVAE FT GVETEDQLARVAADGCTDVQGYLISRPIPPGEIEHFLAESRNVIDAATEVSL" FT CDS 234209..234652 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0522" FT /product="possible activator of photopigment and puc with FT BLUF domain" FT /db_xref="InterPro:IPR007024" FT /db_xref="UniProtKB/TrEMBL:Q6NCF0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25966.1" FT /translation="MPSELYRCVYYSKNLIAGGPARIAEEIESILAAARRNNPTLQVTG FT ALVFNRGLFAQVLEGPCPSVESLFEKISRDERHGDIQVLAFRAVPERLFSNWSMAFLGR FT SREDENLFGHIGPQTGFSTERLEGDRLLEIVRNLAFEEEARAA" FT CDS complement(234663..235349) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0523" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009781" FT /db_xref="UniProtKB/TrEMBL:Q6NCE9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25967.1" FT /translation="MTEHPDDDPLLLRFRKLPRIVRLVYSRPRLFASIAIGVVAFALLP FT GWLRPVTRALIGWDVSIIVYLALAYTMMARCGVAYIRRNAVLQDDGRFLILMVTAIGAY FT ATIAAIVTELGTAHRGAAELALATFTIALSWAAVHTTFALHYAHEYYRGDREGGLAFPG FT SDEHTEPDYWDFVYFSFVIGMTAQVSDVGITDRTIRRTATAHGVVSFVFNTALVALMVN FT IAASAI" FT misc_feature complement(order(234669..234734,234909..234974, FT 235005..235070,235107..235163,235194..235259)) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(235357..236283) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0524" FT /product="putative geranyltranstransferase FT (farnesyl-diphosphate synthase)" FT /function="InterPro IPR000092:IPR001092:IPR001687 COGs FT COG0142" FT /EC_number="2.5.1.10" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCE8" FT /db_xref="InterPro:IPR000092" FT /db_xref="InterPro:IPR008949" FT /db_xref="InterPro:IPR017446" FT /db_xref="UniProtKB/TrEMBL:Q6NCE8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25968.1" FT /translation="MATGTSTIDFAKRLDTTAEETEALLGRLLSDELMSDEIARPRRLM FT DAIRYSTLGGGKRLRPFLAVESAAVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNS FT DLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLG FT GMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASPDQYRALDD FT YGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRLRDLVAR FT ADQALAPFGERGEVLRAAARFVAERKS" FT CDS 236385..237095 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0525" FT /product="possible peptidoglycan transglycosylase" FT /function="InterPro IPR001264 COGs COG0744" FT /db_xref="GOA:Q6NCE7" FT /db_xref="InterPro:IPR001264" FT /db_xref="InterPro:IPR011812" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCE7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25969.1" FT /translation="MSDPVASAPRTKRVVRIVILVALALLALPYLLTILYGGGQPVSTL FT MLWRWATGAPVSRTWIDIENISPALPRSVVAAEDAKFCSHHGIDWDSVRDVIDDMQDGE FT ASRGGSTITQQVAKNLFLWPGRSMIRKALEAPLALWIDFVLPKQRILEIYLNIAEWGPD FT GQFGAMAGADYAFGRSAAQLSAKEAATLAAILPNPRVRSAKAPGPGVRRLAATYVARAR FT AAELRQCWRENRES" FT misc_feature 236433..236501 FT /note="1 probable transmembrane helix predicted byTMHMM2.0" FT CDS 237257..237439 FT /codon_start=1 FT /transl_table=11 FT /gene="rpmF, L32" FT /locus_tag="RPA0526" FT /product="50S ribosomal protein L32" FT /function="InterPro IPR005718 COGs COG0333" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCE6" FT /db_xref="InterPro:IPR002677" FT /db_xref="UniProtKB/Swiss-Prot:Q6NCE6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25970.1" FT /translation="MAVPRRKTSPSRRGMRRSADAIKRPTYVEDKDSGELRRPHHLDLK FT TGMYKGRQVLKKKDS" FT CDS 237682..238314 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0527" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCE5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25971.1" FT /translation="MSIIGFPLLLIPVAICNIIVFLMPGLAFDAALTRVVLPSGATWTI FT ALGDTLVALGVLLLLPEVMKAARPGAKYLTDHLLSLLVLGGITAEFVMLPQFANATVAL FT LSLLALVDFLSGIALRSRHKREARAARSAAAKSSAETIEDEPEQPATVAEPAPVVVPAT FT ELAPQTVEPASASAASAASIAEAVLLDRPEPVKPAETAKNEEKSPAR" FT misc_feature order(237685..237753,237796..237864,237898..237957, FT 237970..238038) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(238331..238792) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0528" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCE4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25972.1" FT /translation="METNSDSGTGTDGRPSAYYQVSASGTRLAMTPTGWGQPSRNETIN FT AGATMAKVWIDDGSDVYSASAEPDCAEAELIEPLPVPVTPPPMRTRYTDRLVRPSSNFV FT AQLMAIDGGYPQTRDCNRAEPGQANAAYRSTTGHAHTAPPTGFKTQRMS" FT CDS 238884..240626 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0529" FT /product="putative diguanylate cyclase FT (GGDEF)/phosphodiesterase (EAL)" FT /function="InterPro IPR000160:IPR001633 COGs COG2200" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:Q6NCE3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25973.1" FT /translation="MSSAAPAPRSSTAQTVTAPDSLLLSLLGQAAFVWDLASDTLSWTG FT RAAELFQDIPAETLATGASFAALLEPSRHVRSDALLNGAATAGPGCVPYRIEYGIRAST FT AAPVSWIEETGVWFAGPDGRPARVEGIVRINNERHARDEQLLKLSQHDPLTGELNRTHL FT IGALAEAIEEATRFRTSLSFMLVGLDHLARVNDSFGFDVADEVISTIAGRIRNRLRAGD FT QLGRFSGNKFGLVLKNCTVDDAHIAAERFLAAVRDEIVPTKSGPVSLTASIGAVSAPRH FT ARTADEAINRAQEALAAAKHRRSGSFAMWRPNVERDTQRRVNIRVTDEIVTALNERRIV FT LAYEPVVDASSRAPAFHECLVRMKTDDGQVLFAPDIVPVAERLGLIRLVDHRVLELVVA FT ELAAAPGVTLSLNISPDTTIDADWWAGIESLMLAHPGIAERLIVEITETVAIPDLDEVR FT GFVNRLKTLGAKIAIDDFGAGYTSFRNLRALGVDIVKIDGAFVQNIARSADDRAFVQTL FT IDLARRLGIKTVAEWVQDDESAQLLRDWGCDYIQGRLIGLASQQRPWPLAAEAAARLAG FT KAVN" FT CDS complement(240757..241425) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0530" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR007897" FT /db_xref="InterPro:IPR010134" FT /db_xref="InterPro:IPR012909" FT /db_xref="UniProtKB/TrEMBL:Q6NCE2" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25974.1" FT /translation="MLTLLHCVSACCREAAGSLSSVCVGDMAKSDQPTTIKKYANRRLY FT NTGTSTYVTLEDLATMVKDGEDFLVYDAKTGDDITRSVLAQIIFEQENKAGQNLLPTTF FT LRQLIRFYGDSMQMVVPKYLEQSIDSLTREQEKFRKQMASTFSLTPFAPLEETVRRNME FT LFQQTFSMFVPRPPSHESTDEVPAETSGGADSIEDLRRQMKEMQDRLERMSLEQPKKDE FT " FT CDS 241629..242807 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0531" FT /product="beta-ketothiolase, acetoacetyl-CoA thiolase" FT /function="InterPro IPR002155 COGs COG0183" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCE1" FT /db_xref="HSSP:1AFW" FT /db_xref="InterPro:IPR002155" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR020610" FT /db_xref="InterPro:IPR020613" FT /db_xref="InterPro:IPR020615" FT /db_xref="InterPro:IPR020616" FT /db_xref="InterPro:IPR020617" FT /db_xref="UniProtKB/TrEMBL:Q6NCE1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25975.1" FT /translation="MSDDVVIVSAARTAVGSFNGAFANTPAHELGAVAIKAALERGGID FT PAQVSEVIMGQILTAGQGQNPARQASIAAGIPVDSPAWGINQLCGSGLRSVALGYQALM FT NGDSDIVIAGGQESMSMAPHAQYLRGGVKMGAVELVDTMLKDGLWDAFNGYHMGNTAEN FT VARQWQITRDQQDEFAVASQQKAEAAQKAGKFKDEIVPVTIKTRKGDIVVDTDEYPRHG FT ATLEAMAKLKPAFEKDGTVTAGSASGINDGAAAVVLMTAKQAEKLGKKPLARIVSWGQA FT GVDPKIMGSGPIPASRAALKKAGWSVGDLDLIEANEAFAAQACAVNKDLGWDTSKVNVN FT GGAIAIGHPIGASGARVLVTLLHEMQKRDSKKGLATLCIGGGMGIAMCLARD" FT terminator 242877..242897 FT /note="TransTerm prediction, 98+%" FT CDS 242990..243715 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0532" FT /product="beta-ketothiolase, acetoacetyl-CoA reductase" FT /function="InterPro IPR002198:IPR002347:IPR003560 COGs FT COG1028" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCE0" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR011283" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NCE0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25976.1" FT /translation="MTRVALVTGGTRGIGAAISKALKAAGYKVAASYAGNDSAAEKFKN FT ETGIPVYKWDVSSFDACAEGVKKVEAELGPVDVLVNNAGITRDGAFHKMTLEQWNAVIN FT TNLGSLFNMTRQVIEGMRTRKFGRIVNISSINGQKGQFGQVNYSAAKAGDIGFTKALAL FT ENARGGITVNVICPGYINTEMVQAVPKDVLDKAILPLIPCNRLGEAEEIARAVVFLAGD FT DAGYITGSTLTINGGQYMV" FT CDS 243792..244658 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0533" FT /product="possible transmembrane protein" FT /function="InterPro IPR000620" FT /db_xref="GOA:Q6NCD9" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q6NCD9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25977.1" FT /translation="MTSRVATLIGLSAILMWSLLAVMTVATGTIPPFQLAAMTFAIGAL FT AAAVGWIVRPQAVRALRQPPLVWAVGVGGLFGYHALYFLALRLAPPAEAGLLNYLWPLL FT IVLFSSLLPGERLKLHHLAGALLGLAGTVLLFTGNGAAIERAYLPGLAAAFVAAFVWAS FT YSVLSRRLSAVPTDAVAGFCFVTALLAAAVHVLIEPTVWPDDALQWTSIVALGIGPVGA FT AFYAWDIGMKRGDIRVLGAASYATPLLSTAFLIVAGYARPSTALAVAALLIAGGGLLAA FT KDMLKRG" FT sig_peptide 243792..243932 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.588 atresidue 47" FT misc_feature order(243804..243872,243882..243950,243987..244046, FT 244074..244127,244146..244214,244227..244295, FT 244329..244397,244407..244466,244503..244571, FT 244581..244634) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(244678..245199) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0534" FT /product="conserved hypothetical protein" FT /function="InterPro IPR001969 COGs COG3577" FT /db_xref="GOA:Q6NCD8" FT /db_xref="InterPro:IPR001969" FT /db_xref="InterPro:IPR009007" FT /db_xref="InterPro:IPR011969" FT /db_xref="UniProtKB/TrEMBL:Q6NCD8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25978.1" FT /translation="MRSILIFAAALVVLGTAMAQIADRITPAPAQAHAAPHATVGMAAV FT TSENYGRSISIDRDPRGHFRTDGRIDGQRLSFMVDTGASVVALNESSAARFGLRPSRGD FT YKTKVSTANGQVKAARARIAMLDVGGLIVRDVDALVLPDEALSENLLGLSYLSKLKRFA FT YADGRMVLEQ" FT sig_peptide complement(245140..245199) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.822 atresidue 20" FT CDS complement(245329..247806) FT /codon_start=1 FT /transl_table=11 FT /gene="hrpB" FT /locus_tag="RPA0535" FT /product="putative ATP-dependent helicase" FT /function="InterPro IPR001410:IPR001650:IPR001687 COGs FT COG1643" FT /db_xref="GOA:Q6NCD7" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR007502" FT /db_xref="InterPro:IPR010225" FT /db_xref="InterPro:IPR013689" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/TrEMBL:Q6NCD7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25979.1" FT /translation="MTRTFDTPLPIDDALDELTAALEASNTAVLVAPPGAGKTTRVPLA FT LLDAPWLRNQKIIVLEPRRIAARASAERMAKTLSEKAGERIGYRVRFGSKVSRATRIEV FT VTEGIFTRQILDDPELNGVAAVLFDEFHERSLDADLGLALARDAQQGLREDLRILVMSA FT TIDGARVARLLGDAPVVESLGRAFPVETRYLGRRSDAPLERQMAEAIAQALRAETGSVL FT AFLPGAAEIRRTETMLRERVQDPAVEIVPLFGALDAAVQDRAIQPAPKGQRKVVLATSI FT AETSLTIEGVRIVVDCGLSRVPRYEPDLGLTRLETVRASRAAVDQRRGRAGRIEPGVCY FT RLWDEPQTASLPAYTQPEILSADLSSLLLDLAQWGVADPSSLAFLDPPPQPALKEAREL FT LGELGALDPDGRITDEGRSLRAMALPPRLARMIVDAARHDCAKDAAEVAAILTERGLGG FT DSADLDNRRDQFRRDRSQRASSARQMAQRWATQAASSSPSPQDAGELSSGVLLAFAFPD FT RVAKNRGNGSFTLANGRGAAVEQTSALARAPYLAVGELTGSAAQGRILLAAPIALSEIE FT LHFGDQITDADEVSFDRSAMALRARRRRALHAITLSEAPLALTPSEQTARVLAEGLVVA FT GLDRLPWSKQLQQWRGRVMFLRKAEGDPWPDLSDAALAETRENWLVPALFDKTGLKDFS FT ASDLSDALMNLLPWELRARLDREAPTHFEAPTGSKLPIDYEAEQGPTIAVRLQELFGLT FT THPSVAGGAVPLVLELLSPAHRPVQVTRDLPGFWRGSYAGVRADLRGRYPRHPWPEDPA FT SAPPTRRAKPKGT" FT CDS 247980..249032 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0536" FT /product="Acyltransferase 3 family" FT /function="InterPro IPR002656" FT /db_xref="GOA:Q6NCD6" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:Q6NCD6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25980.1" FT /translation="MTANGTLAPRMHGGRVDWVDYAKGICIIMVVMMHSVLGVEAAAGQ FT TSFMHYVVEFARPFRMPDFFLISGLFLSVVIDRGWRTYLDRKVVHFAYFYVLWVTIQFA FT FKAPSFAAEMGWAGVAKLYALSFIDPFGTLWFIYLLPIFFVVTKLTRRLPPLLIWGVAA FT LLESLHVATGWMVPDEFCARFFYFYTGYLFARHVFAFSDAARARPALALFGLAVWAVVN FT AVLVHVGAADLPVISLLLGLAGACAIITVGTLLAEKRWLDGLRFCGEHSIVIYLAFFLP FT MAISRSLLLKYAPFLDLGVIAIIVNIAGVVGALIIWKLAMKSGATFLFERPDAFWIAPR FT KQATRLQAAE" FT misc_feature order(248040..248108,248151..248207,248241..248294, FT 248352..248420,248439..248507,248517..248576, FT 248601..248669,248679..248747,248766..248834, FT 248862..248930) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(249150..250709) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0537" FT /product="coenzyme A transferase" FT /function="InterPro IPR001865:IPR003702 COGs COG0427" FT /db_xref="GOA:Q6NCD5" FT /db_xref="InterPro:IPR003702" FT /db_xref="InterPro:IPR017821" FT /db_xref="UniProtKB/TrEMBL:Q6NCD5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25981.1" FT /translation="MVNAERILAPHLRSKVMTAADAAALIPSGAHVGMSGFTGAGYPKL FT LPLALAERINAHHARGQKFKVSVWTGASTAPELDGALAKVDGIEMRLPYQSDPTCRKRI FT NAGRMEYIDIHLSHVAQHAWFGFLGKLDIAVVEVAGIREDGSLIPSSSIGNNKTWLDLA FT DKVILEVNAWQDIRLEGMHDVYYGTQLPPNRKPIPIIASGDRIGEQYLRCDSAKIVAIV FT ETNLPDRNSAFSPPDDTSQAIAGHILDFLGHEVKKGRLPHNLLPLQSGVGNVANAVMAG FT LEDGPFDNLTAYTEVLQDGMLHLLRKGKLAHASATALSLSPEGYDEFLRNLDFYRERIV FT LRQQEISNHPEVIRRLGVIAMNGMIEADIYGNVNSTHVMGTSIMNGIGGSGDFARNSFL FT SFFMTPSAAKGGKISCIVPMTSHVDHTEHDVQVIVTEQGLADLRGLSPKQRAKVIIENC FT AHPTFRPALKEYFKRALEYSPGLHTPHILDEALTFLPNWMANKAAREAWRDDAVVQADA FT WR" FT terminator complement(251396..251417) FT /note="TransTerm prediction, 98+%" FT CDS complement(251449..252903) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0538" FT /product="putative Omp2b porin" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCD4" FT /db_xref="InterPro:IPR003684" FT /db_xref="UniProtKB/TrEMBL:Q6NCD4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25982.1" FT /translation="MNIIKQLALGTAAAVIAVGSAQAADLPLKAKAVEYVKVCSIYGAG FT FYYIPGTDTCIKLGGYLRADVTMFGSGGYNAPAWNGNAGQKNRLSNDYIFRSRQDINID FT TRTATEYGVVRTYFDATFNWTTGSDTIANGSLGVYYAFIQFAGFTFGKAVSQFDTPWTG FT YPGNNTSFLIGGYDDVTGINQVSYTAEFGNGVSASISLEDQSSYLQSALYNVSSAPNFL FT AYGANSYAGTSIPDIVGKIRVDQAWGLFQVSAAAHQVRASYYNPALETSGHPSDTWGYA FT VQGALSLKNLPTGPGDSINITATYSNGATRYVLGGVSPNSFAIYGNNSVPGTYQSVAFG FT VAADGVFAGLNNLTGTGIEKTSAWGVRGAFNHNWNPYWSTSLFGSYTKIDYNGTATALI FT CNGLGAANVAGFNCNPDFAIAQVGTVTRWTPVKNLTLSGEVMYTYLDQASSGVLPLTAS FT ATKPAANYEFKDQGVWSGNLRVQRNF" FT sig_peptide complement(252832..252903) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.999 atresidue 24" FT CDS 253472..254005 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0539" FT /product="transcriptional regulator, MarR family" FT /function="InterPro IPR000835 COGs COG1846" FT /db_xref="GOA:Q6NCD3" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NCD3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25983.1" FT /translation="MRDNDRTMQTKSKAEARAPRGSTIDPDLARRFATTVASVTVFLDE FT IRQFRAKSLGISGPQFALLMAVMDLEQGDGVSIRHVAKAVHVDPSFITTQSKLLEKKGL FT VRRQVDSHDARVVKLSLSDKAYKQIAALATDERDLNSFIFEDISGEALEQLTSQLGDLQ FT NRLEKATVKLASGL" FT CDS complement(254000..255025) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0540" FT /product="hypothetical protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6NCD2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25984.1" FT /translation="MAQNEGVSFSECVAAAKLIRSSNGPGWRQAWEELARSHVQRAEEA FT RRTGNEPEAQKSWLHAANYFMAAAIESCPEGAEPALGALARSCLHNYLAHLTPQGETVA FT IPWLEPRSLEGFYLPVGTYSAETGPVVVCIAETRRTKEEILSLVLRSARKRGMTLLCVD FT LPDEPPSSRAGPETGIPAILDYLIDGRGIDAKRIAVISDGSPSSLVTRGIALDGRIAAA FT VCDGGLWDLWVARQTEACGAALGMVQGCARRPAVSCPMLVPLLASEGIEPGHARQLLTE FT HHPGNRDILLKVFGETSSGPWTLNGYDPILVADFVFDWVGQQLKAATGDADCIRRLESR FT L" FT tRNA complement(255334..255418) FT /gene="tRNA-Leu5" FT /locus_tag="RNA_37" FT /product="tRNA_Leu" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 255589..256137 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0541" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCD1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25985.1" FT /translation="MSADLIDHRDTLSETGRPERIAGGVGLTVAVVAVAALGLAWFSQL FT VLELAPCKLCLEQRYAYYLDIPLGLLIAFAAWRRAPVGLLAAGLVVLGLMALGNAGLAA FT YHAGVEWRFWAGPSDCSGPILDLSKAGGLLAQLDTVKVVRCDEVQWRFLGLSFAGYNVL FT ASLALAALCGWGLVRLKRR" FT misc_feature order(255649..255717,255760..255819,255832..255900, FT 256051..256119) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(256140..257192) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0542" FT /product="conserved hypothetical protein" FT /function="COGs COG3180" FT /db_xref="InterPro:IPR007820" FT /db_xref="InterPro:IPR017516" FT /db_xref="UniProtKB/TrEMBL:Q6NCD0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25986.1" FT /translation="MTLRSKTLQVIETIAIGSAGGALFYWAQLPGGLITGAMIAVGAAG FT LAGRKMGLPPPLSHIVLMALGVSLGSVVSPTMVHNLASYPVTIGLLAVATFCATFGSSI FT YLQRVHGWDRTSALLAGSPGALSQIIMLATERKADVPGIAVVQVMRVIILTSAVPMLLA FT LIGMAGHGALPSRGPEATPLVLAVLIAVAVGVALLLRLVNFPASWMFGAMLGSSVLHGG FT GWVEGTLPQWAYLAALVGIGTLIGARFGAIKPRTILSYIGAALGSFAVAIAISAVFVVA FT IMLTTPVKLNDLVVAFSPGAMDAMMALALTLHIDPVFVGAHHLSRFIYVSIVTPGIVHW FT FGHSPDDVDD" FT misc_feature complement(order(256161..256211,256233..256289, FT 256335..256400,256437..256502,256518..256574, FT 256596..256652,256698..256763,256875..256940, FT 256956..257021,257049..257114)) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 257387..257914 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0543" FT /product="unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="UniProtKB/TrEMBL:Q6NCC9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE25987.1" FT /translation="MRVLRYETRAALLTAAALLTWSAATPAQALTAQECSAKYQAAKTD FT GTLNGQGWNDFRKEHCGAAASADSKAAEAKPADAKPDAKPEAKSEAKPADSKPESKSKA FT KSAAVPSVPQGPAVYPSAIDAKFAQEKPTLARLHTCAQQWKANKAANTTGGLRWIQKGG FT GYWSECNKRLKG" FT sig_peptide 257387..257476 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.967 atresidue 30" FT CDS 258068..258451 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0544" FT /product="LrgA family holin protein" FT /function="InterPro IPR005538 COGs COG1380" FT /db_xref="GOA:Q6NCC8" FT /db_xref="InterPro:IPR005538" FT /db_xref="UniProtKB/TrEMBL:Q6NCC8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25988.1" FT /translation="MIASVGLILLCQLVGEVIARGLGLPLPSPVLGLLLLFVLLVVRDY FT IKPLAIGPLGNGGVEDASKGMLAHLSLLFVPAGVGVIQQLDMITTHGIAIMLVLAGSVL FT ITLVVTVVTFVVVARLLAMWVPR" FT misc_feature order(258128..258196,258260..258313,258350..258418) FT /note="3 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 258448..259170 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0545" FT /product="conserved hypothetical protein" FT /function="COGs COG1346" FT /db_xref="GOA:Q6NCC7" FT /db_xref="InterPro:IPR007300" FT /db_xref="UniProtKB/TrEMBL:Q6NCC7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25989.1" FT /translation="MNANPFSLWVYLSQTPLLWLTVTLLVYAATDAVSQATGRNPLVNP FT VLHAMWIIGVFLWATGTSYTTYFSGAQFVHFLLGPATVALAVPLYENRKLVLAAILPMA FT LALVVGCVTAIVSVVWLAQLAGLPETVVLSLAPKSVTAGVAMGISESLHADPSLTAVAV FT ILTGILGAIVVSPLMNRLGIRDYRARGFAVGLASHGIGTARAFQVDAIAGVFAGIAMSL FT NALITALLVPVLVTLLVR" FT sig_peptide 258448..258534 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.727) with cleavage site probability FT 0.658 atresidue 29" FT misc_feature order(258475..258534,258571..258630,258658..258717, FT 258736..258804,258928..258996,259015..259068, FT 259096..259164) FT /note="7 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 259265..259729 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0546" FT /product="hypothetical protein" FT /function="InterPro IPR000104" FT /db_xref="UniProtKB/TrEMBL:Q6NCC6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25990.1" FT /translation="MSDASVLSAAHAAAPPLRWAMPRPILAIVAALIAAAAAALAVPDA FT ATAANAQSDAELVLLLRFMAGVKAVLALAALGAVVWRLGYAASPFLSAVYLLAPALMVA FT APVLIWQIAPTALGAGLFHGGLALLLLALFADRGQTSELVRHTLLARHTA" FT sig_peptide 259265..259420 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.933) with cleavage site probability FT 0.402 atresidue 52" FT misc_feature order(259325..259393,259436..259504,259523..259591, FT 259601..259669) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(259733..260809) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0547" FT /product="conserved hypothetical protein" FT /function="InterPro IPR000379 COGs COG0400" FT /db_xref="GOA:Q6NCC5" FT /db_xref="InterPro:IPR003140" FT /db_xref="UniProtKB/TrEMBL:Q6NCC5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25991.1" FT /translation="MSEAVIDDIVALLPPLLQSLESLGFVARYLHPPEFGDLLKLAGTP FT DEALQTELPRLANWPETFAHLRGPLQTAGEQALTAFAGLRAVDAGQGDLGDVFRALRHL FT PQALEALYPLAANLPPVSSFFLDPDNQQNEALLARLTQPKHPDSGVFHRFNEPGSRSGY FT SLYVPEYYDPDREWPLVMALHGGSGHGRLFLWSWLRDARARGAIVVAPTATGRTWALMG FT EDVDSPNLARILDEVRGHWRIDPSRLLLTGLSDGGTFCYVSGLTSDSPFTHLAPIAASF FT HPLLAGAADSARLRGLPIQIVHGRHDWMFPVEVARQAHEALVSAGADVSYREIADLSHS FT YPREANVALLDWLKVPAA" FT CDS 260992..262152 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0548" FT /product="Protein of unknown function UPF0118" FT /function="InterPro IPR002549 COGs COG0628" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:Q6NCC4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25992.1" FT /translation="MPASENKFFILLLVVATGLFGWILWPLYSAVLWGMVIAILFAPLN FT RGLNRAFGFRRNLAALMSVTIIVLMVLLPMSLLGAALAREAAGMYTKIESGNLDLLKTM FT RELLAARPDWLGDLLSRFGVGNLADIQQRLSAALLRGSQYLAGQALDIGQSTFDFTVNL FT FVMVYLLFFLLRDGDLLAARIRRATPLGVDHQTRLLDKFTVVIRATVKGNMLIALIQGA FT LGGLAFYVLGISGALMWAVVMAFLSLLPAVGAGIVWLPMALYLIASGSVWHGVGLIVWG FT MLVIGMVDNFLRPILVGKDTRMPDYVVLISTLGGLEVFGLNGFVIGPVIAAMFIATWDI FT YSIAREDAGDTPRIGTGAGTGLAAVAPSEPAGPVPVRSDSGTTPVA" FT misc_feature order(261010..261069,261082..261135,261172..261240, FT 261445..261513,261631..261690,261700..261768, FT 261787..261855,261913..261981) FT /note="8 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(262149..262811) FT /codon_start=1 FT /transl_table=11 FT /gene="ChrR" FT /locus_tag="RPA0549" FT /product="sensor protein ChrR, cytochrome cycA regulator" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012807" FT /db_xref="UniProtKB/TrEMBL:Q6NCC3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25993.1" FT /translation="MTVRHHIGDDLLLSYAAGTLDEASSLLVATHLALCPHCRARAAAA FT DALGGEMLDALPAAAVTPELWQNVLARTQDQPETPPAILATALRPRSDIVIPEPLRSYL FT GTDLAGLRWTRLAPRVQQITIDIPGCRPRARMLRFEAGTRVLEHGHSGRELTLVLHGSL FT CDGAAVMRRGDVAETDEGTEHQPQAGPDGDCICLAVTDAPLRFKSRFARLLQPWFGI" FT CDS complement(262808..263395) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0550" FT /product="RNA polymerase ECF-type sigma factor" FT /function="InterPro IPR000838 COGs COG1595" FT /db_xref="GOA:Q6NCC2" FT /db_xref="InterPro:IPR000838" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR007630" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q6NCC2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25994.1" FT /translation="MDQLRDGPRPPSAEMADCIVRIAAAQDRAAFETLFRHFAPRLKSY FT FARRGGDPALAEEITQETMVSVWRNAAQFDPARASASTWIFTIARNLSIDRLRQAKRPG FT FDPHDPAFVPDEEEPPDRRLERTETEQRVREVMETLSFNEKSVLMLSFYENQSHSEIAE FT QLGLPVGTVKSRIRLAFGKLRAALDAPAGELR" FT CDS complement(264024..264905) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0551" FT /product="transcriptional regulator, LysR family" FT /function="InterPro IPR000847:IPR005119 COGs COG0583" FT /db_xref="GOA:Q6NCC1" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NCC1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25995.1" FT /translation="MEIRHLRYFAAVARHLNFTAAAESLGVAQPPLSQQIRDLEAEIGT FT PLFERTTRRVALTRAGEDFLKQALAILERADNAVQRARSIGAGTAGILNVGLTGSVLTG FT PLGRAIQQFALNYPNVDLRIHEMSPDRQVAALKSGQTDVSFLRCPPQDAEIASELAWRE FT SVRLVLPKGHALSARKVTLADLRDESFVFLRLEDSLFAKYLWQCCFEAGYAPRVTHQAI FT ESTSLTSLVAAGLGVAIIPEFVSKLAHPDVVYRPIAGPPISADVHALTTAANNPLASQF FT IALVQTLSGKAS" FT CDS 265011..266318 FT /codon_start=1 FT /transl_table=11 FT /gene="dctA1" FT /locus_tag="RPA0552" FT /product="dicarboxylate transport protein" FT /function="InterPro IPR001991 COGs COG1301" FT /db_xref="GOA:Q6NCC0" FT /db_xref="InterPro:IPR001991" FT /db_xref="InterPro:IPR018107" FT /db_xref="UniProtKB/TrEMBL:Q6NCC0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25996.1" FT /translation="MKRFFASLFGQVVTALVLGVVVGALWPEVGVALKPLGDLFIKLIK FT FAIAPLVFGVVVNGIVGAGDLKKVGRVGLKSLIYFEAVTTLALALGIALAYVFQPGAGM FT NVNTATLDGSALAGYSSHVKEVTGFTDFIMRLVPTTFIDAFAKGDVLQVLIIAILFGAG FT LSLLGERGKPLADSIERITEVLFKIIGIIVKLAPLGVLGAVSFTVAKYGIGSLKQLGLL FT VGLFYVGVALFVFVILGGIMRLAGFSLIKLLAYLREELTVVAGTASSDSVLPQVMRKLE FT RLGIKDSTVGLVIPTGYSFNLDAFSLYLTLATVFIAQATNTPLSFGHLLVILGIALLTS FT KGAHGVPGSAIVVLAATLSAVPDIPLIGLVLVLSVDWFVGIARALGNLVGNCVATVVIA FT AWEGDIDRAQAKRVLNGEVTTDTAAILDAPVAEASV" FT sig_peptide 265011..265082 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 0.859) with cleavage site probability FT 0.512 atresidue 24" FT misc_feature order(265020..265088,265125..265193,265236..265304, FT 265458..265517,265560..265628,265665..265733, FT 265890..265958,265977..266030,266058..266126, FT 266145..266213) FT /note="10 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 266356..267195 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0553" FT /product="conserved hypothetical protein" FT /function="COGs COG3257" FT /db_xref="InterPro:IPR008579" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR013096" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR017627" FT /db_xref="UniProtKB/TrEMBL:Q6NCB9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25997.1" FT /translation="MNAPTYNPACGGLPPQTALHTGRAVFTEAYAVIPHGVMSDIVTSL FT LPGWTNTRVWILARPLSGFAETFAQYLVEVAPGGGSDHPEPDPQGEGVLFVVGGTPSLD FT LGGNTHALRPGSYAYLPPGCGWRLRNAGSEPARFHWVRKAYEAVPGLDAPDAFVTHESE FT IEPAGMTGTGGSWATTRFVSPEDLRHDMHVNIVTLQPGASIPFEETHVMEHGLFVLEGK FT AVYRLNRDWVEVEAGDFMWLRAFCPQACYAGGPAPFRYLLYKDVNRHPALGRRGLGR" FT CDS 267192..267704 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0554" FT /product="putative ureidoglycolate hydrolase" FT /function="COGs COG3194" FT /db_xref="GOA:Q6NCB8" FT /db_xref="InterPro:IPR007247" FT /db_xref="UniProtKB/TrEMBL:Q6NCB8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25998.1" FT /translation="MTDTARKIVAQPLSAAAFAPFGQVIDTAQVASRPMNDGRARRFHD FT LAEIEVIGNGARVVVGLVEAEPYAVPLWLNLVERHPLGAQAFVPLNAAPFLVVVCPDES FT GKPGAPQAFITAPHQGVCYARNTWHSVLTPFGAAQDFVVIDRGGPGVNLEEHLFDEPWI FT VHLSTSG" FT CDS complement(267753..268349) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0555" FT /product="possible methyltransferase" FT /function="InterPro IPR000051:IPR001601 COGs COG0500" FT /db_xref="GOA:Q6NCB7" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q6NCB7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE25999.1" FT /translation="MPPALWIGWRMASRRTVLPCPSEIAWLVEMENPLARATRSEQVVA FT QLQLGPGDQAIDIGCGPGRVTLPLARAVGPNGQVTALDVQDGMLAKVAAKAAAEALTNI FT RLLRADVREAAVVAGSLDAAVMVMALGEFPSGTEIFPSVHRMLRPGGRLLVAESVFDPH FT YVSRRRVRERVSAAGFRELRCVGNAFGYSITFERT" FT CDS complement(268493..269050) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0556" FT /product="HNH endonuclease:HNH nuclease" FT /function="InterPro IPR002711:IPR003615 COGs COG1403" FT /db_xref="GOA:Q6NCB6" FT /db_xref="InterPro:IPR002711" FT /db_xref="InterPro:IPR003615" FT /db_xref="UniProtKB/TrEMBL:Q6NCB6" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26000.1" FT /translation="MNAHVSHGGWPVLVLNADFRPLSYYPLSLWSWQDAVKAVFLDRVN FT IVAHYDRAVHSPNLEFRLPSVVSLKSFVKPTTNPAFTRFNVFLRDRFVCQYCGAPDDLT FT FDHIIPRSKGGQTTWENVVAACSPCNLRKGNLTPEQAKMFPRQTAFAPTVHQLHRNGRL FT FPPNYLHESWLDYLYWDTELDP" FT CDS 269331..270329 FT /codon_start=1 FT /transl_table=11 FT /gene="cysK" FT /locus_tag="RPA0557" FT /product="cysteine synthase, cytosolic FT O-acetylserine(thiol)lyase" FT /function="InterPro IPR001216:IPR001926:IPR005856:IPR005859 FT COGs COG0031" FT /EC_number="2.5.1.47" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCB5" FT /db_xref="HSSP:1O58" FT /db_xref="InterPro:IPR001216" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR005856" FT /db_xref="InterPro:IPR005859" FT /db_xref="UniProtKB/TrEMBL:Q6NCB5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26001.1" FT /translation="MSSAATASIKAVAEAPAHRPGRGRVYESIADAYGDTPLVRLNRLP FT QQHGVKATIYAKLEYFNPASSVKDRIGAAMIAALEQEGIIKPDTVLIEPTSGNTGIALA FT FVAAAKGYRLKLVMPESMSIERRKMLAFLGAELVLTEAAKGMKGAVAKAEELVAATPNA FT VMPQQFKNLANPAVHRRTTAEEIWNDTDGAVDIFVAGVGTGGTVSGVGQVLKPRKASLK FT VVAVEPEESPVLSGGAPGPHKIQGIGAGFVPDILDRSVIDEVVKIPSATAIETSRALAR FT HEGIPGGISSGAAIAAAIELGKRPENAGKTIVAIVPSFSERYLSTVLFEGV" FT CDS complement(270401..271318) FT /codon_start=1 FT /transl_table=11 FT /gene="purC1" FT /locus_tag="RPA0558" FT /product="putative FT phosphoribosylaminoimidazole-succinocarboxamide synthase" FT /function="InterPro IPR001636 COGs COG0152" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCB4" FT /db_xref="HSSP:1A48" FT /db_xref="InterPro:IPR001636" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR018236" FT /db_xref="UniProtKB/TrEMBL:Q6NCB4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26002.1" FT /translation="MTTMLSSDLPLTKIGRGKVRDIYAVDDDRLLLVTTDRISAFDVVM FT GETIPMKGAVLTQVSAFWFGQLGGVVPHHMISADIDEIIAAVPALQGHRAALAGRTMLC FT RRTTVFPIECVIRGYITGSAWKEYAASGTLAGEKLAAGLTESERLEPPIFSPATKAETG FT HDENITIARMREIVGDEAAYTLESMTRAIYTQGEEVAREQGIIIADTKFEFGRDKDGRI FT ILIDEVMTPDSSRFWAADTYAPGRSQPSFDKQPLRDYLDAERRAGRWNGEAPPPKLPAE FT IVEATSKRYLDAYRRLTGTDLVVT" FT CDS complement(271389..272306) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0559" FT /product="putative pirin" FT /function="InterPro IPR003829 COGs COG1741" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR003829" FT /db_xref="InterPro:IPR008778" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012093" FT /db_xref="UniProtKB/TrEMBL:Q6NCB3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26003.1" FT /translation="MSWMPTNDPVLGDPTTCDALELIIVPRTRDLGDGFAVRRALPHGK FT RQMVGPFIFFDHFGPVQFIAGKGMDVRPHPHIGLATVTYLFDGKIMHRDSEGNIQEIAP FT GAMNLMTAGRGIAHSERTPDVERSVGQSMLGLQSWIALPQAAEEIAPSFQHFAAATLPM FT VQDTGFTARVIAGSAFGKASPVTMVSPWFYVEVNAKAGTAVPLDPDHEERAIYVVDGEV FT EIAGERHVGPTLLIFRPGDRITVRAKTDTRMMFLGGDALEGPRHIWWNFVSSSKERIEQ FT AKQDWKTGRFAAVPNESEFIPLPE" FT CDS complement(272436..273866) FT /codon_start=1 FT /transl_table=11 FT /gene="MLYCD, MCD" FT /locus_tag="RPA0560" FT /product="malonyl-CoA decarboxylase" FT /EC_number="4.1.1.9" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCB2" FT /db_xref="InterPro:IPR007956" FT /db_xref="UniProtKB/TrEMBL:Q6NCB2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26004.1" FT /translation="MKLMPIATTADRASEFLGGLFNSLTERGRSLFGLTSSQPMSGDEL FT IALSETLLSRRGEASGVALAASLLAGYEAADEDDKLAFLDALAEQFGPDLAELNTAIEA FT FRADASAEATGELLRAAEPRRQELIRRLNHAPGGTAALVKMREAVLARIAAHPQLRHVD FT DDFVHLFTSWFNRGFLVLQRIDWTTPANILEKIIRYEQVHTIHDWDDLRARLAPPDRRC FT YGFFHPRLVDEPLIFVEVALTKDSPAAIAPLLDLEREPIAASDATTAVFYSISNTQQGL FT AGISFGNFLIKQVVEEIKRELPNVQTFVTLSPVPGFAKWLKRERDNPDSTLLDASARTA FT LEALDTPNWFDDADTADRLKPIVLQLAAAYFLQAKGPNGRPLDPVARFHLGNGARLDRL FT NFLGDRSPNGMRQSHGLMVNYLYALGDIEANHEALFERGQIAAASAVRKLVPTKPVTSE FT PRKGNGKTASAPQAAPTA" FT CDS complement(274032..274637) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0561" FT /product="hypothetical protein" FT /db_xref="GOA:Q6NCB1" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR013656" FT /db_xref="UniProtKB/TrEMBL:Q6NCB1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26005.1" FT /translation="MQRFVCEQNIAHFQKLLETAEDEKLRRTLLGLLSSAKRELALLHS FT RLSGADLSPLAYRNRGGDLNSVLAQIRAGFDASDHPYMLIDAGPGLKIIDINDAYARAT FT FTAREAIVGKPLFEIFPDNPAIDTADGVSNVYNSLRAVVETGEPHALAVQRYDMRNTEG FT VFVERYWQSINTPVRDAGGKLICLLHNVEDVTAEVLAN" FT CDS complement(274713..276077) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0562" FT /product="MmgE/PrpD family" FT /function="InterPro IPR005656 COGs COG2079" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCB0" FT /db_xref="InterPro:IPR005656" FT /db_xref="UniProtKB/TrEMBL:Q6NCB0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26006.1" FT /translation="MANETATLAGYVAALQFTDIPQDVLARAKVLTLDFLGSAIRARRE FT AESTPSILQMLQALSLDGAGESTVFGDDKRWTPAVAALLNGALGHSLDFDDTHADSSLH FT PSAPVVPAAFAVGELVGASGRDVLTAIVAGYEVCCRLGNALDPTSHYARGFHPTATAGT FT YGAAAAAAKLFGLSQDQIVAAFGVSGSQAAGSLQFLVNGAWNKRYQVGAAAMNGVIAAT FT LAKNGFIGSTESVEGIHGLLVGYTDTPHPDKAVADLGSVYETMKIGVKPYPSCRYTHAA FT IDALIAMRREHNLTPEQITRVEVGLHKNGITLTGDAPTKRHPRSIVGGQFSMFFTGALA FT LEQGSFGWDDYTRLGDPAIDALADKFDVVRDERLEGKTHPFGARVSITTEDGVHERIYA FT DPSGEPGSFPSDQAMTQKFLQLARPVLDGRAQSFADAVLTLERFAKVSEATALGR" FT CDS 276203..277360 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0563" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NCA9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26007.1" FT /translation="MIPRQTVQPERLLPPMTSSRTRLLSQWKPRRPQWGLALRITLAAL FT LALGFAQSLHLHLPLWAVLTAIIVTQTSVGRSLKTAGDYLIGTIGGAIYGGAITIFVPH FT HSELGLLGALALAVAPLALLAAIKPNLNVATVTAIIVLLVPTITKVEPLASAIDRVLEV FT GVGAIVGLAVSFVVLPSRAQGQALAAAARSLELMADALGALLAGLTKGLDNDALHRLQD FT GIGASLVTLAEIGAEAQRERNAGLSRGPDVAPLVRTLLRLRHDLVIVGRAVTAPLPPSL FT QDRLGGAVDNLRLAATSHLSACAKALRERRAPPPLGPMEQALAAYVTEVAAVRRDGLIR FT ALPGDQAERFFALGFAMEQLHQNFRDLEMRVTEWALPGKPTARVV" FT misc_feature order(276305..276364,276452..276511,276524..276583, FT 276593..276661,276680..276748) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS complement(277365..277826) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0564" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR018729" FT /db_xref="UniProtKB/TrEMBL:Q6NCA8" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26008.1" FT /translation="MYDVFKFLHVVGVVVLVGNVTITAFWKAFSDMTRDPKIVAHAQRG FT VTVSDFIFTLTGIALIIIGGYGAALVKDMPLFNSFWLVAGQILFVISGLMWFGILIPLQ FT IRQARTARSFAQGGEIPAQYWRDAKTWLIWGITATVPLVAAVFVMIYKI" FT misc_feature complement(order(277374..277430,277518..277583, FT 277614..277679,277740..277796)) FT /note="4 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 278630..279817 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0565" FT /product="putative polyhydroxybutyrate depolymerase" FT /function="InterPro IPR000379 COGs COG3509" FT /db_xref="GOA:Q6NCA7" FT /db_xref="InterPro:IPR010126" FT /db_xref="UniProtKB/TrEMBL:Q6NCA7" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26009.1" FT /translation="MSLKNPIDFLGQLRKMQSMNGLGWGEVPTDNRLIETVSFGTNPGD FT LRMFSFVPKGATQRLPLVVVLHGCTQNAAAYEIGAGWCTLAQRYGFALLLPEQTRTNNP FT NTCFNWFSPDDIRRDSGEVGSIHQMIEHMTRTHQIDQARIFATGLSAGGGMTAALLATY FT PDVFAGGAVIAGLPYGVAHNVRQALKEMRHATPRSGHELGELVRDTTAHQGPWPKLAVW FT HGDADRTVDPANADALVRQWLDLHGLAEAPTAQNEVCGYPHRAWRNSSGETVVESYTVT FT GMAHGTPLGAGAGDERYGVAGAYLLDVGISSSYHIAQFFGLTSRIHQPRSADTSAKDRP FT AHDGHRELTTDVARRSRKSAGTGHAEGAAAPPHGKRGIDVGAVITRALTAAGLMK" FT CDS 279946..280365 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0566" FT /product="conserved unknown protein" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR009642" FT /db_xref="UniProtKB/TrEMBL:Q6NCA6" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAE26010.1" FT /translation="MINRFAGTAIVVLALAAPAVAHAQGVPGGIERGARDGERAAGPVG FT AVVGGTIGGVVGGVAGILGVDDRPQFRSYVVEQRHPSYRYRDEVRVGVVLPGDGVTYYE FT VPDRFGRASEYRYTVVNDRTVLVDPRTHKVVEIIE" FT sig_peptide 279946..280017 FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.961 atresidue 24" FT misc_feature order(279958..280026,280069..280137) FT /note="2 probable transmembrane helices predicted FT byTMHMM2.0" FT terminator 280402..280433 FT /note="TransTerm prediction, 98+%" FT CDS complement(280442..281419) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0567" FT /product="probable transcriptional regulator, AraC family" FT /function="InterPro IPR000005 COGs COG2207" FT /db_xref="GOA:Q6NCA5" FT /db_xref="InterPro:IPR000005" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q6NCA5" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26011.1" FT /translation="MTVELLNEPLSRYPAFDTADPEELRQALSSVYGAKLVEGPIAADF FT HARSNFVQLDDIALAFGVGTGSIAVEFPEGECARLQIALSGQFTTRSGGTSTAINARQA FT GIISPGRNARTEYGQNYSFTLLRVSTSALERKLTTLLGCKPKASLEFEPAANNEAPQVV FT NLRRMLCFLANQLNCSPLPPVVLAELQEAITLLFLSAFRHNYSRQLERESHGIAPKHVR FT QVEEYIEANWMRPITIEKLTALTGISSRGIFKAFQRSRGYSPMAFAKRVRLQHAHNLLS FT DGATPTTVTAAALSCGFSNLGHFARDYRDMFGEKPSETLQRARP" FT CDS complement(281680..282345) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0568" FT /product="probable hydrolase" FT /function="InterPro IPR001279 COGs COG0491" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCA4" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q6NCA4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26012.1" FT /translation="MSETQTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVP FT EILAAIEKTKVDVGAIWLTHGHIDHVGGAADLRDALKVEVIGPHRDDQFLLDNVVNSGR FT SFGIDGVRDVTPDRWLDDGDSVSIGELNFQILHCPGHSPGSVVFFNDAMRFAFVGDVLF FT AGSVGRTDLPGGSHATLIQSITQKLLPLGDDVGFICGHGPGSSFGQERRTNPFLTGEA" FT CDS complement(282435..283553) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0569" FT /product="conserved hypothetical protein" FT /function="InterPro IPR002035" FT /db_xref="InterPro:IPR002035" FT /db_xref="UniProtKB/TrEMBL:Q6NCA3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26013.1" FT /translation="MKRITFQTALTLAALALPLSFATAAQARPSVEVAFVLDTTGSMSG FT LIEGAKRKIWSIATTILDDNPDADIRMGLVAYRDIGDDYVVRSVDLTTDIQDLYGQLLQ FT LQARGGGDWPESVNEALDTAINKLHWRQGGDTRRIVFLVGDAPPHMDYAQDTKYPETLA FT VARQKDIIVNAVQAGDARDTARVWHEIADGGRGRYIPIPQDGGQIVVIQTPYDDDIIIL FT QKQINGTVIPYGPAPMQRRTEEKTGQLAKVAASAPASASDMASYINKRARSSSEAVTGG FT GDLVSDVQAGRQKLDQVKEEDLPPELRALPAEQRAAKLDAQMTARKALNDKLAALVRQR FT DAYLLAQRDKQPKQASSFDREVEATLKAQLKR" FT sig_peptide complement(283470..283553) FT /note="Signal predicted by SignalP 2.0 HMM (Signal FT peptideprobabilty 1.000) with cleavage site probability FT 0.892 atresidue 28" FT CDS 283709..284188 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0570" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009394" FT /db_xref="UniProtKB/TrEMBL:Q6NCA2" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26014.1" FT /translation="MESNAVQMILPRDLRQSETALNIARGTQRLLRSLGFACVSELPLP FT SGRRADLVALNERGEIWIVEIKSSVEDLRADHKWPDYRAHCDRLFFAFTQDLPCEIFPA FT ETGLIAADGYGAHLHCEAPEHKLPAATRKVMMLRFALAAAQRLGRLSDPQGFADG" FT CDS complement(284314..284868) FT /codon_start=1 FT /transl_table=11 FT /gene="regR" FT /locus_tag="RPA0571" FT /product="two-component transcriptional regulator RegR, Fis FT family" FT /function="InterPro IPR001789:IPR002197 COGs COG0784" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NCA1" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q6NCA1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26015.1" FT /translation="MNAIPELNDHTDRSLLIVEDDKPFLDRLARAMETRGFAVTACDSV FT SSGLAQIGKAAPAFAVVDLRLGDGNGLDVVSALKRERPDCRAIVLTGYGNIATAVTAVK FT MGAVDYLSKPADADDVVAALLSTGTEKSEPPPNPMSADRVRWEHIQRIYEMCNRNVSET FT ARRLNMHRRTLQRILAKRAPR" FT CDS complement(284960..286282) FT /codon_start=1 FT /transl_table=11 FT /gene="regS" FT /locus_tag="RPA0572" FT /product="two component sensor histidine kinase, RegS" FT /function="InterPro IPR003594:IPR003661:IPR005467 COGs FT COG0642" FT /db_xref="GOA:Q6NCA0" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q6NCA0" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26016.1" FT /translation="MSDDLISADFRHPRRHVRLDTILRLRWLAALGQLSAIFVVSEGLE FT FDFAVMPCIVIIAVSGLVNLALQIAFNPMQRMEPIYAALLLALNISELAGLLYFTGGLQ FT NPFAFLFLGPVLISATALPTRMTISLGIFAAGCAAFLGYSHLPLPWAGEEPVALPRIYL FT VGVWLSILLAIGVTSLYTFQVTEEARKLADALSAAELVLEREQHLTQLDGLAAAAAHEL FT GTPLSTIFLISRELEKTAPPEMASDLRTLREQAQRCREILGKIAQLSSAGAPFDRMPLS FT TLIEEAVAPHRDFGIAIKIRLAQHGEPEPVVMRNPAILYGIGNILENAVDFARTAVEVN FT AWWNAETVQIVVSDDGPGIKPDVLRRIGEPYLSRRRSADDPNRERSGLGLGVFIARTLL FT ERTGAKVEFRNKTFPDHGAIVQLSWPRNRFETIEKTEETMA" FT misc_feature complement(order(285737..285802,285833..285898, FT 285914..285964,285977..286042,286082..286138)) FT /note="5 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 286390..287187 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0573" FT /product="putative ABC transporter (ATP-binding protein)" FT /function="InterPro IPR001687:IPR003439:IPR003593 COGs FT COG1131" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="GOA:Q6NC99" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6NC99" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26017.1" FT /translation="MMAIDSVGRADDPAGSSSVSAAIEVSHLVKTYKTTRAVDDISFRV FT PRGSITGLLGGNGAGKTTTIAMIMGLVLPTAGRIRVLGCAMPEQRADVLGRINFESPYV FT DMPSRLTVRQNLTVFGQLYAVPDLRGRIAELAADFDLTDFLDRASGKLSAGQKTRVALA FT KALINQPELLLLDEPTASLDPDTADWIRSHLESYRKRRGASILLASHNMLEVERLCDRV FT VIMKRGRIEDDDTPSAIMARYHRSTLEEVFLDVARGRARDAES" FT CDS 287184..288014 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0574" FT /product="possible ABC transporter" FT /function="COGs COG0842" FT /db_xref="GOA:Q6NC98" FT /db_xref="InterPro:IPR000412" FT /db_xref="InterPro:IPR013525" FT /db_xref="UniProtKB/TrEMBL:Q6NC98" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26018.1" FT /translation="MRSLVANLELGHGLAWHRISAMVLRYWYLLLSSWPRLFELVYWPA FT LQVITWGFLQSYVAQNAGFFARAGGTLIGAVILWDILFRGQLGFSISFLEEMWARNLGN FT LMMSPLKPLEFLIALMIMSLIRLAIGVVPMVVLAMTLFDFNLFGFGLPLGAFFCNLIFT FT SWALGIFVSGLVLRHGLGAESIVWSLMFGVMPLACVYYPVAVLPHWLQFVAWTLPPTYV FT FEGMRALLIDHQFRGDLMLWALGINVVLFVAAFISFLAMLNSARRHGSLIQSGE" FT misc_feature order(287262..287330,287373..287432,287529..287597, FT 287640..287708,287733..287801,287901..287969) FT /note="6 probable transmembrane helices predicted FT byTMHMM2.0" FT CDS 288153..289481 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0575" FT /product="putative intracellular PHB depolymerase" FT /note="observed by proteomics" FT /note="Citation: Proteomics from VerBerkmoes et al. (2003) FT unpublished" FT /db_xref="InterPro:IPR009656" FT /db_xref="InterPro:IPR010915" FT /db_xref="UniProtKB/TrEMBL:Q6NC97" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAE26019.1" FT /translation="MPVVIGEFGRPPDMPAEVSPALTTPMYWFYEMAHASLNPARAMSD FT ATKLAFKNPLNPWSHTEFGKSIAAACEVFERTTRRYGKPEWGLDDTEVNGMRVPIEIHN FT VWEKPFCRLLYFERKLERPLRHPQPRLLIVAPMSGHYATLLRGTVEAFLPTHEVYITDW FT ADARMVPMAAGRFDLDDYVDYVIEMLQTLGGNVHVMAVCQPSVPVLTAVSVMEANEDPF FT VPLSMTLMGGPIDTRRSPTAVNNLAAEKGIDWFRNHVITKVPFPHPGFMRDVYPGFLQL FT NGFISMNLDRHMDAHRNLFNHLVQGDGDLADKHREFYDEYLAVMDLTAEFYLQTVDLVF FT VKHALPKGEMTHRGKLVEPSKVKRVALMTVEGENDDISGLGQTEATHGLCSSIPDNRRV FT HYVQKGVGHYGVFNGSRFRSEIVPRICDFHASSTSDTSARAAE" FT CDS 289738..290571 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="RPA0576" FT |