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EBI DbfetchID BX251411; SV 1; linear; genomic DNA; STD; PRO; 299050 BP. XX AC BX251411; XX DT 17-FEB-2003 (Rel. 74, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 7) XX DE Tropheryma whipplei TW08/27, complete genome; segment 2/3 XX KW complete genome. XX OS Tropheryma whipplei TW08/27 OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Micrococcineae; Tropheryma. XX RN [1] RP 1-299050 RX DOI; 10.1016/S0140-6736(03)12597-4 RX PUBMED; 12606174. RA Bentley S.D., Maiwald M., Murphy L.D., Pallen M.J., Yeats C.A., Dover L., RA Norbertczak H.T., Besra G.S., Quail M.A., Harris D.E., von Herbay A., RA Goble A., Rutter S., Squares R., Squares S., Barrell B.G., Parkhill J., RA Relman D.A.; RT "Sequencing and analysis of the genome of the Whipple's disease bacterium RT Tropheryma whipplei"; RL Lancet 361(9358):637-644(2003). XX RN [2] RP 1-299050 RA Bentley S.D.; RT ; RL Submitted (10-FEB-2003) to the EMBL/GenBank/DDBJ databases. RL Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA E-mail: RL sdb@sanger.ac.uk XX DR EMBL-CON; BX072543. DR RFAM; RF00023; tmRNA. XX FH Key Location/Qualifiers FH FT source 1..299050 FT /organism="Tropheryma whipplei TW08/27" FT /strain="TW08/27" FT /mol_type="genomic DNA" FT /db_xref="taxon:218496" FT CDS 81..3251 FT /transl_table=11 FT /locus_tag="TW287" FT /product="class I tRNA synthetase (I, L, M and V)" FT /note="Similar to Mycobacterium tuberculosis isoleucyl-tRNA FT synthetase IleS or Rv1536 or mt1587 or mtcy48.29C FT SWALL:SYI_MYCTU (SWALL:Q10765) (1041 aa) fasta scores: E(): FT 0, 52.58% id in 1046 aa, and to Methanosarcina barkeri FT isoleucyl-tRNA synthetase IleS SWALL:Q9P9L9 (EMBL:AF208389) FT (1058 aa) fasta scores: E(): 3.3e-65, 30.23% id in 1065 aa" FT /db_xref="GOA:Q83I16" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002301" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015905" FT /db_xref="InterPro:IPR018353" FT /db_xref="UniProtKB/Swiss-Prot:Q83I16" FT /protein_id="CAD66961.1" FT /translation="MCDQGEVSSQNSSDYKEQRPTPRPNLPKIEESVLAFWSSDKTFEA FT SLEQRQHGKRWVFYDGPPFANGLPHFGHLLTGYIKDAIPRYQTMRGQYVPRVFGWDTHG FT LPAELEAMKRLGITEKSQIESMGIASFNEAARKSVLTYVDQWEEYVNRQARWVDFKNGY FT KTLDLDYMESVLWAFKTLYKKGVIYEGYKVLPYCWNDQTPLSNHELRMDDEVYKQRLDD FT SLTVTFPLIGQKAKTCGLDGVAALAWTTTPWTLPSNMALIVSPNVEYVVVSSARQNSNS FT DFLLCKSSLDSYAECLGYESGQDARASIRRTLLGKEIEGIHYKPLFDYYADLHNAFTIL FT SDNYVDVTEGTGIVHASPAHGEDDKRVCDAFGVPTVVSINDAACFTDVISNYAGMHIFD FT ANAVIRSDLSRDGRILRHESYKHSYPHCWRCRSPLIYKAVTSWFFRITDSVNRMLELNQ FT QINWVPKSVKNGQFAKWLSSAKDWSISRTRYWGTPIPVWKSDNPEYPRIDCYGSLKELE FT DDFGIKLTDLHRPEIDRLTRPNPDDPTGASTMRRVPDVLDVWFDAASMPFAQLHYPFEN FT IERFEANKSADFIVEYAGQIRGWFYLLHAMSTALFDGVAFKNAICHGIVLGDDGQKASK FT SLRNYPDVYDVFENEGSDAVRWYLISSSILRGGSLIVSRKKIQDAIRQYITPLWSSWYF FT FHIYSEAARPGGYKARFSVDSQDILDRYILSKTGLLVEDVTRFMDSFDMASAALQLRDF FT VAVLTNWYIRRSRDRFWDGSDTGAFDTLYTVLETLCRLGAVFVPMVSEHVYKCLTNSRS FT VHLSDWPDVATFPNETGLVETMDRVRKICSTGLSLRKRLGIKARQPLSSAHIRVAQVGS FT LAQYKDIISGELNVKTVSIEEGSCTQRMLKILPRVAGPRLAGDVQTVIAAARRGDWTDH FT DGHVTAGGIPLLENEYQLVAGAQDSKNSQPLPFGGSVTLDTRIDETLRSEGVARDTVRQ FT IQIARKEKDLNITDRISLEVCVPDEQVKNNLLAFSELICKETLCDRLDILVKKGIDGIT FT VSLEKFRQ" FT misc_feature 174..2094 FT /note="tRNA synthetases class I (I, L, M and V) Score = FT 626.0 E-value = 1.5e-185" FT CDS 3361..4722 FT /transl_table=11 FT /gene="fgs" FT /locus_tag="TW288" FT /product="folylpolyglutamate synthase" FT /EC_number="6.3.2.17" FT /note="Similar to Lactobacillus casei folylpolyglutamate FT synthase Fgs SWALL:FOLC_LACCA (SWALL:P15925) (428 aa) fasta FT scores: E(): 6.4e-22, 33.23% id in 343 aa, and to FT Corynebacterium glutamicum folylpolyglutamate synthase FT cgl2375 SWALL:BAB99768 (EMBL:AP005281) (458 aa) fasta FT scores: E(): 5.6e-47, 37.14% id in 455 aa" FT /db_xref="GOA:Q83I15" FT /db_xref="HSSP:1FGS" FT /db_xref="InterPro:IPR001645" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR013221" FT /db_xref="InterPro:IPR018109" FT /db_xref="UniProtKB/TrEMBL:Q83I15" FT /protein_id="CAD66962.1" FT /translation="MSRAGEALPQPRLDGTKLALSYLSNPQECAPVIHITGTNGKTTVS FT RMIACILTSLGLRVGLFTSPHITALEERIQIDMNPVQGHILEKHWFDIQFQLRLADAHL FT EKKNCPPLTFFECMTVLAFSCFADTPVDVMVLEVGMGGAWDATNVVDARVCVFTPIDFD FT HTGRLGSRLEEIAHTKAGIIKPGSFVVAAEQHQVVQECLEDYFASINIGCQSYDTELPD FT KIRFFGQDFDCDYKPVAGGQILDLRGLYGECNEVFLPLFGGYQAKNAALSLAAVESFFG FT RVEHDIVLEAFSNITSPGRLQIISKNPVVLLDAAHNPHAAKHLAIALDEFFSFGKIVFI FT LAFLSDKDIEGIIRNLMSFLHGSLRVTSDSVGYSESESTRFSNPRVTFVITQSTHPRAV FT AADVAFSIAKRVVANEGLIVCESANDAFQYSTRLNPDAIVVSGSISILSSFIPR" FT misc_feature 3385..4228 FT /note="Mur ligase family, catalytic domain Score = 34.0 FT E-value = 1.1e-07" FT misc_feature 3457..3528 FT /note="PS01011 Folylpolyglutamate synthase signature 1." FT misc_feature 3763..3810 FT /note="PS01012 Folylpolyglutamate synthase signature 2." FT misc_feature 4249..4489 FT /note="Mur ligase family, glutamate ligase domain Score = FT 27.3 E-value = 2.6e-05" FT CDS 4727..5056 FT /transl_table=11 FT /locus_tag="TW289" FT /product="putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein SCO2613 or SCC88.24c SWALL:Q9L1G5 (EMBL:AL139298) FT (118 aa) fasta scores: E(): 0.83, 28.84% id in 104 aa" FT /db_xref="UniProtKB/TrEMBL:Q83NP2" FT /protein_id="CAD66963.1" FT /translation="MNYLRTKVARVVLSFELVAFILAGVFLFTMPFDRFPSGIFIAVVV FT PMAFLALLLSSKLFGITLGWIVQIFIVTVGFFISIPIAIFGFIFGTLWAYALWSARHHN FT GHMRQ" FT misc_feature 4727..4906 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.899) with cleavage FT site probability 0.318 between residues 60 and 61" FT misc_feature order(4760..4813,4841..4909,4946..5014) FT /note="3 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 12-29, 39-61 and 74-96" FT CDS 5121..5531 FT /transl_table=11 FT /gene="ndk" FT /locus_tag="TW290" FT /product="nucleoside diphosphate kinase" FT /EC_number="2.7.4.6" FT /note="Similar to Streptomyces coelicolor nucleoside FT diphosphate kinase Ndk or SCO2612 or SCC88.23c FT SWALL:NDK_STRCO (SWALL:P50589) (137 aa) fasta scores: E(): FT 5.6e-23, 48.52% id in 136 aa, and to Dictyostelium FT discoideum nucleoside diphosphate kinase, cytosolic NdkB or FT NdkC or Gip17 SWALL:NDKC_DICDI (SWALL:P22887) (155 aa) FT fasta scores: E(): 3e-24, 48.5% id in 134 aa" FT /db_xref="GOA:Q83I14" FT /db_xref="HSSP:1NPK" FT /db_xref="InterPro:IPR001564" FT /db_xref="UniProtKB/TrEMBL:Q83I14" FT /protein_id="CAD66964.1" FT /translation="MEQTLVIIKPDGIRRGLIGQVLSRIEAKGYQIVDIRMLVPDRQSV FT EEHYLEHRDRHFYLPLVDFMTSGPIVLVRAEGHGVVDALRTLVGVSDPTLALPGTIRGD FT FGRNWGLDVIQNIVHASDSVKSAKRELDIWFP" FT misc_feature 5124..5526 FT /note="Nucleoside diphosphate kinase Score = 164.4 E-value FT = 1.3e-46" FT misc_feature 5466..5492 FT /note="PS00469 Nucleoside diphosphate kinases active site." FT CDS 5749..7398 FT /transl_table=11 FT /gene="rne" FT /locus_tag="TW291" FT /product="ribonuclease E" FT /EC_number="3.1.4.-" FT /note="Similar to Escherichia coli ribonuclease E Rne or FT Ams or Hmp1 or b1084 SWALL:RNE_ECOLI (SWALL:P21513) (1061 FT aa) fasta scores: E(): 9.7e-38, 36.25% id in 411 aa, and to FT Streptomyces coelicolor hypothetical protein SCO2599 or FT SCC88.10c SWALL:Q9L1H8 (EMBL:AL139298) (1340 aa) fasta FT scores: E(): 1.6e-58, 44.28% id in 560 aa" FT /db_xref="GOA:Q83I13" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004659" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR019307" FT /db_xref="UniProtKB/TrEMBL:Q83I13" FT /protein_id="CAD66965.1" FT /translation="MFGRCMVDTGSKRASGYKVVFQAPDFSARIVSQKKRSDITPLRQS FT KRRASRTSPAETGILRRNTQRVMLVRGSGASDVQVGILEEGILVEYYMARGASSSLVGN FT IYMGRVQNVLPGMEAAFVDIGCGRNAVLYSGEAVWEGVKAQSIENTVREGSSVLVQVTK FT DAVANKGPRVTGQLSLAGRYLVYAPGSGGVSRRIAPSERARLQKSLKAAVEDVSSLIIR FT TAAVGATSEQLGNDAKMLCEAYRAIKEKSENATAPSIIYSEPDLLIRLLRDTFNNDFKE FT LIVEGAELYERVNSYLQDVSPEMLGKVSKSSEEDLFDAYRITEQIDRSLNRKVLLPSGG FT SLVVDHTEAMTVIDVNTGKFVGTSSSLEQTVTDNNLEAVDEIVRQIRLRDLGGIVVIDF FT IDMLLQENRDLVYNRLLEALSLDRSRHKVAEITSLGLVQMTRKKLGVALEPVSELCDRC FT SGRGRVINPVPNKPRARKKHRLRQVNKEASDAAVRIISAMQDTAGYSDARSDTLSSRGA FT LAPDSQVSISVGNRRRRLVTSTIDASGDPRAS" FT CDS 7522..7836 FT /transl_table=11 FT /gene="rplU" FT /locus_tag="TW292" FT /product="50s ribosomal protein L21" FT /note="Similar to Mycobacterium tuberculosis 50s ribosomal FT protein L21 RplU or Rv2442c or mt2518 or mtcy428.04 FT SWALL:RL21_MYCTU (SWALL:P71907) (104 aa) fasta scores: E(): FT 9.8e-15, 50.5% id in 99 aa, and to Escherichia coli 50s FT ribosomal protein L21 RplU or b3186 or z4549 or ecs4065 FT SWALL:RL21_ECOLI (SWALL:P02422) (103 aa) fasta scores: E(): FT 0.00059, 29.7% id in 101 aa" FT /db_xref="GOA:Q83I12" FT /db_xref="InterPro:IPR001787" FT /db_xref="UniProtKB/Swiss-Prot:Q83I12" FT /protein_id="CAD66966.1" FT /translation="MFAVVKASGFQRLVEVGSVISIDPTNVDSGGFVHLPVLLLVDGAE FT VVSDPDKLRLARVSAKFLRKLRGPKVRIHKFKNKTGYHKRQGHRQGVYVFSVTSIERGD FT " FT misc_feature 7522..7804 FT /note="Ribosomal prokaryotic L21 protein Score = 73.3 FT E-value = 3.7e-19" FT CDS 7877..8125 FT /transl_table=11 FT /gene="rpmA" FT /locus_tag="TW293" FT /product="50s ribosomal protein L27" FT /note="Similar to Escherichia coli 50s ribosomal protein FT l27 RpmA or b3185 or z4547 or ecs4064 SWALL:RL27_ECOLI FT (SWALL:P02427) (84 aa) fasta scores: E(): 1.5e-15, 59.75% FT id in 82 aa" FT /db_xref="GOA:Q83I11" FT /db_xref="InterPro:IPR001684" FT /db_xref="InterPro:IPR018261" FT /db_xref="UniProtKB/Swiss-Prot:Q83I11" FT /protein_id="CAD66967.1" FT /translation="MAHKKGASSSRNGRDSNAKRLGVKRFAGQVVSAGEILVRQRGTRF FT HPGTNVRRGDDDTLFACASGRVRFGRSGKRRAVSVDT" FT misc_feature 7880..8117 FT /note="Ribosomal L27 protein Score = 165.7 E-value = FT 5.7e-47" FT misc_feature 7976..8020 FT /note="PS00831 Ribosomal protein L27 signature." FT CDS 8125..9462 FT /transl_table=11 FT /gene="obg" FT /locus_tag="TW294" FT /product="GTP-binding protein" FT /note="Similar to Streptomyces coelicolor Obg or SCO2595 or FT SCC88.06c SWALL:P95722 (EMBL:D87915) (478 aa) fasta scores: FT E(): 9.7e-75, 50.34% id in 441 aa" FT /db_xref="GOA:Q83NP1" FT /db_xref="HSSP:1LNZ" FT /db_xref="InterPro:IPR002917" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR006074" FT /db_xref="InterPro:IPR006169" FT /db_xref="InterPro:IPR014100" FT /db_xref="InterPro:IPR015349" FT /db_xref="UniProtKB/Swiss-Prot:Q83NP1" FT /protein_id="CAD66968.1" FT /translation="MSGITLPEFVDCVTVEFSAGRGGDGCASVRREKYKPLAGPDGGSG FT GHGGSIFLKADTSERTLISFRRKGHYSASNGAHGLSRLRNGARGKDLEVSVPCGTSVYD FT EGGRQIADLVSPGSCLQVVRGGTGGLGNAALAGYRRKTPRFALLGLPGQKRKLRLEVKS FT IADVALVGFPSVGKSSIISAISSAKPKIADYPFTTLHPNLGVVQSGPYRYTVADVPGLV FT EGASKGIGLGLNFLRHIERCSVVVHVIDCANTQQDPISGFNLIEKELSEYKVAENAIPL FT NKRPKVIVLNKIDVLQTKEEQDTLLYLQSVFKKLVTDVYAISAVTRSGLRQFTLRLGEI FT CQEYPSQVQPTSQTILIPAKNTPEFSLDRTDGVYRVTGKKPEKWILQTDFSSDEAISYL FT AERLDRLGIEDALVRAGATCGDEVEIGGVIFTWDPSVANTSFSLSV" FT misc_feature 8188..9010 FT /note="GTP1/OBG family Score = 366.1 E-value = 2.6e-107" FT misc_feature 8635..8658 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 8773..8814 FT /note="PS00905 GTP1/OBG family signature." FT CDS 9528..9767 FT /transl_table=11 FT /locus_tag="TW295" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83NP0" FT /protein_id="CAD66969.1" FT /translation="MLTVSSMWVFKLSAGSTHGVGHIPFVEPAIFLLLAFVACAVLWSY FT RNVSNRHEQYRETYDQVCSAVKRYESLYDKHTKD" FT misc_feature 9594..9662 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 23-45" FT CDS 9790..10350 FT /transl_table=11 FT /gene="nadD" FT /locus_tag="TW296" FT /product="nicotinate-nucleotide adenylyltransferase" FT /EC_number="2.7.7.18" FT /note="Similar to Escherichia coli nicotinate-nucleotide FT adenylyltransferase NadD or b0639 SWALL:NADD_ECOLI FT (SWALL:P52085) (213 aa) fasta scores: E(): 1e-11, 32.19% id FT in 205 aa, and to Streptomyces coelicolor probable FT nicotinate-nucleotide adenylyltransferase NadD or SCO2579 FT or SCC123.17c SWALL:NADD_STRCO (SWALL:Q9RDK7) (188 aa) FT fasta scores: E(): 2.1e-46, 62.36% id in 186 aa" FT /db_xref="GOA:Q83I10" FT /db_xref="InterPro:IPR004820" FT /db_xref="InterPro:IPR004821" FT /db_xref="InterPro:IPR005248" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q83I10" FT /protein_id="CAD66970.1" FT /translation="MGGTFDPIHHGHLVVASEVASRFCLDEVIFVPTGRPPHKKEVSDP FT WHRYLMAVIATASNQRFSVSKIDIERTGPTFTVDTLRELREQLQSSDLFFITGTDALAR FT IFSWKDADTLWSLAHFVAVSRPGHEVVDIPNDRISFLEVPAMAISSSNCRERVRSGLPI FT WYLVPEGVVQYIAKHGLYRSLYG" FT misc_feature 9790..10330 FT /note="Cytidylyltransferase Score = 135.4 E-value = 7e-38" FT CDS 10343..11269 FT /transl_table=11 FT /locus_tag="TW297" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83NN9" FT /protein_id="CAD66971.1" FT /translation="MDDNKHLTRRQLREILRSTRSEQIDVPSVTHDSPLPTSHMFLTEG FT TDSRLRVEHSERSVDGYTTDPSSPDFPRFMSRKMRRALESYRSSSEEPLEKKTETTPIE FT VIPSGGDHTKVHFTDSLELHNVSSKIIPQPSAPVAAGVVGTGIDKGKVLHTRRSRRFGT FT AVGSSLHESPTTTGESREFEARNHSIVATSALVISAPNGPTEMITDTGDVFHTDTVGLP FT QLISQTGGYTGVLDTSEMQETCDTQNFAIAPVSASRAVCASQTPKNLFYKPKKRIFWGF FT FISFAIATAVSIGVGLFAIGVILQNSR" FT misc_feature 11174..11242 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 278-300" FT tRNA 11403..11478 FT /note="tRNA Ala anticodon GGC, Cove score 84.05" FT CDS 11653..12300 FT /transl_table=11 FT /locus_tag="TW298" FT /product="conserved hypothetical protein" FT /note="C-terminal portion similar to that of FT Corynebacterium glutamicum hypothetical protein Cgl1342 FT cgl1342 SWALL:BAB98735 (EMBL:AP005278) (285 aa) fasta FT scores: E(): 2.1e-09, 40% id in 120 aa" FT /db_xref="UniProtKB/TrEMBL:Q83I09" FT /protein_id="CAD66972.1" FT /translation="MMNPKRPCMITPVPVMLNLDDGLYCSGVFMKRILMLLSLFGFQPV FT MSAERASLSDLSGLPLSGPGIGGRFSSSTKDLSVRYDSPGNALELGFCSFLFSSFLSSS FT FLSRVINCIKAKSAANDAVSRAAGKFPGSTLIGGKGDAFRHCYWSARMTIDMGEAKGFG FT DRHEAFSHGPERYMDLKNNEIGRSVGAVYRSYESASRRCEFLAHTDQLVTRA" FT CDS 12318..13370 FT /transl_table=11 FT /locus_tag="TW299" FT /product="putative integral membrane protein (possible FT nuclease activity)" FT /note="Similar to Streptococcus pneumoniae R6 hypothetical FT 37.7 kDa protein spr0510 SWALL:AAK99314 (EMBL:AE008430) FT (333 aa) fasta scores: E(): 4.6e-13, 26.08% id in 322 aa" FT /db_xref="InterPro:IPR005135" FT /db_xref="UniProtKB/TrEMBL:Q83MI5" FT /protein_id="CAD66973.1" FT /translation="MSSPVPSELPCTPRRSRKYSLLLTCALILSGLLGVAFFALVLFPW FT TPFARALSMRSFIAQALAFPHIFGACVVAVSALVLFFARRLSSLWIAASTQGVWALSGV FT LLIIFPSTITAESSPIQKQSIAGITLNIVAFNTQNSFTHADMATLISAFDPDIVVLPET FT TKSDATRAAGGTAFANSVYGYGDLYSNGIALTTIMVHPRLGGVTPITEVPEVTFGTVGL FT KINSRHQFRIFGVHTYPPVPNVFNSWEWDLDRVISFGENNREGPLILAGDFNATLRHGP FT LANRQRLVDTARRCSRAPAGTWPSNLPFWLRTPIDHVFVTPEFEVLKCSTMMVGTSDHL FT AYAATVRLSE" FT misc_feature 12318..12470 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.999) with cleavage FT site probability 0.504 between residues 51 and 52" FT misc_feature order(12378..12446,12489..12557,12576..12644) FT /note="3 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 21-43, 58-80 and 87-109" FT misc_feature 12705..13353 FT /note="Endonuclease/Exonuclease/phosphatase family Score = FT 36.3 E-value = 5e-08" FT CDS complement(13674..14228) FT /transl_table=11 FT /locus_tag="TW300" FT /product="putative DNA-binding/repair enzyme" FT /note="Similar to Bacillus subtilis FT methylated-DNA--protein-cysteine methyltransferase Ogt or FT Dat or Dat1 SWALL:OGT_BACSU (SWALL:P11742) (165 aa) fasta FT scores: E(): 4.4e-12, 44.62% id in 121 aa" FT /db_xref="GOA:Q83I08" FT /db_xref="HSSP:1QNT" FT /db_xref="InterPro:IPR001497" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR014048" FT /db_xref="UniProtKB/TrEMBL:Q83I08" FT /protein_id="CAD66974.1" FT /translation="MSSVEFAVRMRACAFRVKVYSSQTHIIRVKIFRYASVIDDAHKNT FT RYKTRSLSEGSCDCHASNKNSSLTTDLTAEARREILAYFSGTLKTFSVPISLEKASAKQ FT ADVLNMLLKIPYGGCVSYGEIASKVNSSPRAVGAYCAKNPLPFFVPCHRVIRSNGEVGG FT YCGSSNNLIKHSLIEIEQKNS" FT misc_feature complement(13682..13931) FT /note="6-O-methylguanine DNA methyltransferase, DNA binding FT domain Score = 82.2 E-value = 7.7e-22" FT misc_feature complement(13764..13784) FT /note="PS00374 Methylated-DNA--protein-cysteine FT methyltransferase active site." FT misc_feature complement(13806..13871) FT /note="Predicted helix-turn-helix motif with score FT 1060.000, SD 2.80 at aa 120-141, sequence FT VSYGEIASKVNSSPRAVGAYCA" FT CDS complement(14230..15285) FT /transl_table=11 FT /gene="lipA" FT /locus_tag="TW301" FT /product="lipoic acid synthetase" FT /note="Similar to Streptomyces coelicolor lipoic acid FT synthetase LipA or SCO2194 or SC5F7.07 or SC3H12.02 FT SWALL:LIPA_STRCO (SWALL:Q9S2P2) (317 aa) fasta scores: E(): FT 4.3e-85, 68.59% id in 312 aa, and to Escherichia coli, and FT Escherichia coli O157:H7 lipoic acid synthetase LipA or Lip FT or b0628 or z0773 or ecs0666 SWALL:LIPA_ECOLI FT (SWALL:P25845) (321 aa) fasta scores: E(): 4.9e-43, 41.31% FT id in 305 aa" FT /db_xref="GOA:Q83NN8" FT /db_xref="InterPro:IPR003698" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:Q83NN8" FT /protein_id="CAD66975.1" FT /translation="MNDSGNSSKVNVRPPSAGLGAPSPGKRKMLRLEVRNSQVPIERKP FT SWIRARATIGTEYRKVQERVKKQNLRTVCQEAGCPNIYECWEDREATFLIGGSQCTRRC FT DFCQIDTGKPAELDLDEPKRVGQSVAQMKLRYATVTGVARDDLPDGGVWLYAETIREIH FT KQCPGSGVEILIPDFNGKPELLQQIFEAQPEVYAHNIETVPRIFRRIRPAFRYDRSLDV FT ISQGQKAGMITKSNLILGMGETGEEVTQALRDLKSAGCDIVTITQYLRPSPRHLPVARW FT VKPQEFIEYKEQAKEIGFSGVLAGPLVRSSYRAGKLWAQSVKAKMVEIPERVRKLINEI FT EMQETSFRQAV" FT misc_feature complement(14523..15006) FT /note="Radical SAM superfamily Score = 63.6 E-value = FT 3.1e-16" FT CDS complement(15304..15981) FT /transl_table=11 FT /gene="lipB" FT /locus_tag="TW302" FT /product="lipoate-protein ligase B" FT /EC_number="6.-.-.-" FT /note="Similar to Escherichia coli lipoate-protein ligase B FT LipB or b0630 SWALL:LIPB_ECOLI (SWALL:P30976) (213 aa) FT fasta scores: E(): 2.4e-13, 30.08% id in 226 aa, and to FT Mycobacterium tuberculosis lipoate-protein ligase B LipB or FT Rv2217 or mt2274 or mtcy190.28 SWALL:LIPB_MYCTU FT (SWALL:Q10404) (230 aa) fasta scores: E(): 6.1e-32, 48.24% FT id in 199 aa" FT /db_xref="GOA:Q83I07" FT /db_xref="InterPro:IPR000544" FT /db_xref="InterPro:IPR004143" FT /db_xref="InterPro:IPR020605" FT /db_xref="UniProtKB/Swiss-Prot:Q83I07" FT /protein_id="CAD66976.1" FT /translation="MYSIRVLAIECIRLAPEYLPFEEGWRMQQELHKKITESQTNKNRQ FT ASMIFCEHEPVYTAGARTRSWEMPQNEKVIRVGRGGKITWHGPGQLVGYPILSLGATPD FT VLRYVRQIEEGLINALQSVGINGFRIAGRSGVWVRNGVSDEKVAAIGVRVQKNVTLHGF FT ALNCSNDLAPFEKIVPCGISDAGVTTISRILKRTITPKEILDSVFNSICSALEYINTCR FT GNV" FT misc_feature complement(15465..15819) FT /note="Biotin/lipoate A/B protein ligase family Score = FT 113.2 E-value = 3.6e-31" FT misc_feature complement(15700..15747) FT /note="PS01313 Lipoate-protein ligase B signature." FT CDS 16094..17434 FT /transl_table=11 FT /gene="ffh" FT /locus_tag="TW303" FT /product="signal recognition particle protein" FT /note="Similar to Escherichia coli signal recognition FT particle protein Ffh or b2610 or z3904 or ecs3473 FT SWALL:SR54_ECOLI (SWALL:P07019) (453 aa) fasta scores: E(): FT 1.1e-33, 34.89% id in 447 aa" FT /db_xref="GOA:Q83NN7" FT /db_xref="HSSP:1HQ1" FT /db_xref="InterPro:IPR000897" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004125" FT /db_xref="InterPro:IPR004780" FT /db_xref="InterPro:IPR013822" FT /db_xref="UniProtKB/TrEMBL:Q83NN7" FT /protein_id="CAD66977.1" FT /translation="MFETVSGRFLNALSTLRGRGSLVKRDIDVVLSEVYKTLLDSDVSF FT EIAQAFVHRVRGRSMSQESLRAINPHKRVTQIVWEELVDLLGHQKTALKFSRTFPTIIM FT LVGLQGSGKTSFAGKLAKWLMERGHTAALGACDLQRPAAASQLQAVAEQAGASVLIPKS FT GNVLDAVKTVVKTAREKQFSVLIIDTAGRMNADSDMMDQLSEIDRLAKPHQTLLVVDSA FT TGQEALNITRVFCQHLSVTGVVMSKLDSDVKAGAALSVSSLRPIIFSCIGEGVDDLEQF FT NPDSVARRMLGMQGPLEELDDVLRLSDKTPDSHSPITLEDFLDSIQKIKNMRHKLLAFF FT PNSGDLESMLDSSETIRMQAIVRSMTPQERAQPRMLNASRRLRIATGSGTTVNDINRLI FT QKFEHVLKVLSSGNSMKHMTFMNGRFPSFGMRRNNSKTAKSKRRKHR" FT misc_feature 16097..16352 FT /note="SRP54-type protein, helical bundle domain Score = FT 65.4 E-value = 8.8e-17" FT misc_feature 16385..16970 FT /note="SRP54-type protein, GTPase domain Score = 269.3 FT E-value = 3.6e-78" FT misc_feature 16412..16435 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 17039..17318 FT /note="Signal peptide binding domain Score = 77.6 E-value = FT 1.8e-20" FT CDS 17630..18076 FT /transl_table=11 FT /gene="rpsP" FT /locus_tag="TW304" FT /product="30s ribosomal protein S16" FT /note="Similar to Bacillus subtilis 30s ribosomal protein FT S16 RpsP SWALL:RS16_BACSU (SWALL:P21474) (89 aa) fasta FT scores: E(): 1.9e-10, 52.43% id in 82 aa, and to FT Streptomyces coelicolor 30s ribosomal protein S16 RpsP or FT SCO5591 or SC2E1.08 SWALL:RS16_STRCO (SWALL:O69879) (139 FT aa) fasta scores: E(): 6.5e-19, 53.78% id in 119 aa" FT /db_xref="GOA:Q83I06" FT /db_xref="InterPro:IPR000307" FT /db_xref="InterPro:IPR020592" FT /db_xref="UniProtKB/Swiss-Prot:Q83I06" FT /protein_id="CAD66978.1" FT /translation="MAVRIRLKRIGKVKRPFYRIVVADSRTKRDGKVIEQVGKYHPVQN FT PSFIEIDSPRAQYWLSVGAKPTQQALALLKLTGDWARFCGEENPVSRVEQPVSIEAGKS FT APKSCRRSAPVAAGEATPTVSDRPDLPSVSDAPQDVPEDVRGQA" FT misc_feature 17696..17828 FT /note="Ribosomal protein S16 Score = 57.4 E-value = FT 2.2e-14" FT CDS 18073..18303 FT /transl_table=11 FT /locus_tag="TW305" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv2908c or mt2976 or mtcy274.40C SWALL:YT08_MYCTU FT (SWALL:Q10826) (80 aa) fasta scores: E(): 1.4e-07, 46.91% FT id in 81 aa" FT /db_xref="GOA:Q83I05" FT /db_xref="InterPro:IPR004044" FT /db_xref="InterPro:IPR004088" FT /db_xref="InterPro:IPR009019" FT /db_xref="UniProtKB/TrEMBL:Q83I05" FT /protein_id="CAD66979.1" FT /translation="MTGTAIEALVHLIRGIVLNPDDVRVEAFEDGVRVFVHPSDCGRVI FT GRQGNTVKALRTVARALNRGPFMLEIVSDEE" FT misc_feature 18169..18241 FT /note="KH domain Score = 21.4 E-value = 1.1e-05" FT CDS 18303..18851 FT /transl_table=11 FT /gene="rimM" FT /locus_tag="TW306" FT /product="probable 16s rRNA processing protein RimM" FT /note="Similar to Mycobacterium tuberculosis probable 16s FT rRNA processing protein RimM or Rv2907c or mt2975 or FT mtcy274.38C SWALL:RIMM_MYCTU (SWALL:Q10824) (176 aa) fasta FT scores: E(): 1.5e-10, 30.72% id in 179 aa" FT /db_xref="GOA:Q83NN6" FT /db_xref="InterPro:IPR011961" FT /db_xref="UniProtKB/TrEMBL:Q83NN6" FT /protein_id="CAD66980.1" FT /translation="MLLRVGVLLRPYGLHGGLFVSVTTDLPDVRFAVSATLFCSRQLTD FT ASDTCSVLTVRALQKKVGAVTARNRWVIFFEEVRDRTLASTLSGSLLLAEPIEDSRDSE FT LWYDSHLVGMKVTLECRKELGRVVGVEHLPMQDLLVVETKAGSVLLPFVKSIVTSVSDG FT EIMVNPPGGMFVSQVDSAS" FT misc_feature 18312..18819 FT /note="RimM Score = 51.0 E-value = 1.9e-12" FT CDS 18884..19588 FT /transl_table=11 FT /gene="trmD" FT /locus_tag="TW307" FT /product="tRNA (guanine-N1)-methyltransferase" FT /EC_number="2.1.1.31" FT /note="Similar to Escherichia coli tRNA FT (guanine-N1)-methyltransferase TrmB or b2607 or z3901 or FT ecs3470 SWALL:TRMD_ECOLI (SWALL:P07020) (255 aa) fasta FT scores: E(): 4.3e-30, 42.29% id in 227 aa, and to FT Mycobacterium tuberculosis tRNA FT (guanine-N1)-methyltransferase TrmB or rv2906c or mt2974 or FT mtcy274.37C SWALL:TRMD_MYCTU (SWALL:Q10797) (230 aa) fasta FT scores: E(): 7.9e-41, 49.55% id in 226 aa" FT /db_xref="GOA:Q820Z0" FT /db_xref="InterPro:IPR002649" FT /db_xref="InterPro:IPR016009" FT /db_xref="UniProtKB/Swiss-Prot:Q820Z0" FT /protein_id="CAD66981.1" FT /translation="MFVMRCDFVSIFPEYFDVLDISLIGKARRNGLLDLRVHNLREYSE FT AGRVDSSPYGGGPGMVMSAEPWARAIEHIATGESLVVFPSPSGQPYSHDLAQSLSSEMH FT IVFCCGRYEGIDNRIYEWTATRLRSSGISIGDYVLNGGEIAALVILEGFVRFIPGVLGN FT PESLVEESYQYNLLEYPVYTKPAVWRGLEVPDILLSGNHDLIREWRYKKQLEITQKTRP FT DLYSTHIYETDS" FT misc_feature 18884..19138 FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT misc_feature 18953..19580 FT /note="tRNA (Guanine-1)-methyltransferase Score = 350.8 FT E-value = 1.1e-102" FT CDS 19681..20028 FT /transl_table=11 FT /gene="rplS" FT /locus_tag="TW308" FT /product="50s ribosomal protein L19" FT /note="Similar to Escherichia coli 50s ribosomal protein FT L19 RplS or b2606 or z3900 or ecs3469 SWALL:RL19_ECOLI FT (SWALL:P02420) (114 aa) fasta scores: E(): 4.3e-18, 50.94% FT id in 106 aa" FT /db_xref="GOA:Q83I04" FT /db_xref="InterPro:IPR001857" FT /db_xref="InterPro:IPR018257" FT /db_xref="UniProtKB/Swiss-Prot:Q83I04" FT /protein_id="CAD66982.1" FT /translation="MHALDALDALSIKADIPDFSPGDTVRVYVNITEGDRSRVQVFQGV FT VIARRGFGVRQTFTVRKISFQVGVERIFPLHSPSINRIEVVTKGSVRRAKLYYIRKLRG FT KKAKVKQKREL" FT misc_feature 19681..20017 FT /note="Ribosomal protein L19 Score = 189.8 E-value = FT 3.1e-54" FT CDS 20025..20717 FT /transl_table=11 FT /gene="sipS" FT /locus_tag="TW309" FT /product="signal peptidase I" FT /EC_number="3.4.21.89" FT /note="Similar to Bacillus subtilis signal peptidase I SipS FT SWALL:LEPS_BACSU (SWALL:P28628) (184 aa) fasta scores: E(): FT 1.5e-06, 29.64% id in 199 aa, and to Streptomyces lividans FT signal peptidase I sipX SWALL:O86869 (EMBL:Z86111) (320 aa) FT fasta scores: E(): 8.4e-30, 46% id in 213 aa" FT /db_xref="GOA:Q83I03" FT /db_xref="HSSP:1KN9" FT /db_xref="InterPro:IPR000223" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019758" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:Q83I03" FT /protein_id="CAD66983.1" FT /translation="MNVVLHSSLRSLWEKFRGTLFTLLVVVTIVVIVRTFLFGVYYIPS FT GSMLNTLQLGDRIFVSRLHPTLFPLKRGDVVVFRDKNHWIPDDDTSSRSGLLDLILGFI FT EGREPHKLLIKRVIGLPGDRVTCCSEAGRIVVNGRELDETPYLYDATPPASSIVFDVVI FT PEGRLWVMGDNRNNSADSRLHIGLPGGGFVPIADVVGRALLVFWPFGHWKILHNYHDST FT FKGVSRVS" FT misc_feature 20043..20622 FT /note="Signal peptidase I Score = 55.6 E-value = 7.9e-14" FT misc_feature 20085..20153 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 21-43" FT misc_feature 20526..20567 FT /note="PS00761 Signal peptidases I signature 3." FT CDS 20979..21098 FT /transl_table=11 FT /locus_tag="TW311" FT /product="hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83I02" FT /protein_id="CAD66984.1" FT /translation="MGKDPGLDRFVGVNADIECLLLQVYTPGKTVLSNLRAML" FT CDS 21350..21712 FT /transl_table=11 FT /locus_tag="TW312" FT /product="conserved hypothetical protein" FT /note="Similar to Thermotoga maritima hypothetical protein FT Tm0253 SWALL:Y253_THEMA (SWALL:Q9WY95) (108 aa) fasta FT scores: E(): 9.1e-09, 41.5% id in 106 aa" FT /db_xref="GOA:Q83I01" FT /db_xref="InterPro:IPR003509" FT /db_xref="InterPro:IPR011335" FT /db_xref="UniProtKB/Swiss-Prot:Q83I01" FT /protein_id="CAD66985.1" FT /translation="MTHDVSKYALGRIAEDKACNYLSVNGYIVLDRNWYCRFGELDIIA FT RKNGVIVAVEVKGGKRNADYPICNITVKKLSKLTFLLKAWLHENKLNEFCIDLRIDAVS FT VTFIPELQIRHFVGIL" FT misc_feature 21386..21665 FT /note="Uncharacterised protein family UPF0102 Score = 72.7 FT E-value = 5.4e-19" FT CDS 21709..23244 FT /transl_table=11 FT /locus_tag="TW313" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv2897c or mt2965 or mtcy274.28C SWALL:YS97_MYCTU FT (SWALL:Q10818) (503 aa) fasta scores: E(): 1.9e-61, 43.77% FT id in 514 aa" FT /db_xref="GOA:Q83I00" FT /db_xref="InterPro:IPR000523" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004482" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q83I00" FT /protein_id="CAD66986.1" FT /translation="MIAKTYSVALNGLQSSMVELEADIGNGLPIFTLVGLPDAALLEAR FT ERIRAACKNSDLPLSNRKITVNLSPASIPKHGSGFDLAIAIACLSAMGKVDRSLVSQTV FT HIGELGLDGMLRPVPGILPSVLAARTYGYRRVMLPVENVHEARLVPEIEAIPVPSLAHA FT AVAYGADVTVPKTKTVPVQAVLDNSEYEGDLSDISGNQLGIEALQIAAAGGHNLFFYGP FT AGSGKTMLASRLPALLPDLSPQASLEVSSVVSLSGTGLKDGLITRPPFEAPHHSITASA FT LVGGGAKRIIPGAVSRASHGVLFLDEAPEFSPRVLNMLRQPLETGQISIHRSTTTATFP FT ATFQLILAANPCPCGNFGIKDAECVCSSSARRKYMGRIHRPIIDRIDIQLMINRISIAE FT LRSGLSGSSGMTTESVRNTVLLARERTLYRMKDTPWSTNSQASSDWLQRQPILPGATDS FT LDIAFQRGLLSMRGYHKVIRLAWTIADITGVSKLTKSEIDKALIFRTSGQYGG" FT misc_feature 21760..22750 FT /note="Magnesium chelatase, subunit ChlI Score = 159.0 FT E-value = 5.7e-45" FT misc_feature 22369..22392 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 23316..24461 FT /transl_table=11 FT /locus_tag="TW314" FT /product="putative DNA processing protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv2896c or mt2964 or mtcy274.27C SWALL:YS96_MYCTU FT (SWALL:Q10817) (389 aa) fasta scores: E(): 9.6e-28, 40.07% FT id in 272 aa, and to Haemophilus influenzae Smf protein or FT DprA or hi0985 SWALL:SMF_HAEIN (SWALL:P43862) (373 aa) FT fasta scores: E(): 8e-16, 30.63% id in 284 aa" FT /db_xref="GOA:Q83NN5" FT /db_xref="InterPro:IPR003488" FT /db_xref="UniProtKB/TrEMBL:Q83NN5" FT /protein_id="CAD66987.1" FT /translation="MKPLCFSEELSEDQAVDYFARAAWSLISEPGDRIAGRLISCMTAP FT RALGWLLGNISLPFTLDEFESQQLEKHRSVWKMRADYQQLLKSFQAAHHTGAKLVVTDK FT YNKLQDEKPHILWVKGNSPSILLDTSQKVSIVGTRCCSYYGKSVTADISYSLARKNYVI FT VSGGALGIDGTAHMSALSAGKSTIVFFAGGVDWIYPRGNEALFSKICESGIIVSEMPCG FT SRPTKWRFLRRNRLIAAIPSAVVVTEAAARSGSISTAYHAADVQVPVGAVPGPINSPLS FT EGCNRLIRDRIAESVTCADDVVGLFAPLVVSPIQKDSFGLQASRIRVIDALSKKYDRDI FT SEICRLSGMLFDDVSSLMRLLELSGQVIRSGSGWRLSGRLR" FT misc_feature 23586..24204 FT /note="SMF family Score = 217.7 E-value = 1.2e-62" FT CDS 24498..25418 FT /transl_table=11 FT /locus_tag="TW315" FT /product="putative DNA recombinase" FT /note="Similar to Mycobacterium tuberculosis probable FT integrase/recombinase XerC or Rv2894c or mt2962 or FT mtcy274.25C SWALL:XERC_MYCTU (SWALL:Q10815) (298 aa) fasta FT scores: E(): 2.2e-35, 43.18% id in 301 aa, and to FT Pseudomonas fluorescens Sss/XerC protein SWALL:O05324 FT (EMBL:Y12268) (299 aa) fasta scores: E(): 4.6e-29, 36.11% FT id in 288 aa" FT /db_xref="GOA:Q83NN4" FT /db_xref="HSSP:1A0P" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR011931" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q83NN4" FT /protein_id="CAD66988.1" FT /translation="MCPCGDTLNEGFCCLIREFIIYLENVRGYSSHTCRAYYRDLMCFG FT EYIITHDSRENVKSLRDVSIQDLRSWLYSQSHKSARSIRRAVSSLKSFFRWAYDRKITA FT QNTAAALRAPKSTSQLPSVLSEKRIAQILGNFSHTVPVIQLRNTAIFELLYASAIRVSE FT LVSLDLDSIDHDLCTVRVDGKNGKQRVVLFGKPASHALDLYLNMRHTLLSDRSSKALFL FT GSRGRRINPRVVYRLVSELLEMPKGPRGPHVLRHSAATHMLDNGADLRSLQEILGHSSL FT STTQIYTHVSLERLISSYNQAHPRA" FT misc_feature 24537..24801 FT /note="Phage integrase, N-terminal SAM-like domain Score = FT 58.6 E-value = 9.7e-15" FT misc_feature 24867..25386 FT /note="Phage integrase family Score = 137.8 E-value = FT 1.4e-38" FT CDS 25918..26202 FT /transl_table=11 FT /locus_tag="TW316" FT /product="hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83HZ9" FT /protein_id="CAD66989.1" FT /translation="MSGGLEPVPWIIRCLSKMNRSDEAVAVGNDVYALPAKPSVRQEIA FT LAMAEARIKQGRPDLALLELQQVQFRVPYRDEALRLMHRLGALQESHNV" FT CDS complement(26217..26912) FT /transl_table=11 FT /locus_tag="TW317" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="GOA:Q83HZ8" FT /db_xref="InterPro:IPR002886" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:Q83HZ8" FT /protein_id="CAD66990.1" FT /translation="MYSLPSTASINTQFVNFDDDYIDQIKKIITSIVDLNKKNWKWPVS FT SSKKVIRGFKPPRNKKEKYLSGFHRGIDIAAKENESVYAPADGVIKFSGFLANRYVISI FT THANGLVSSFEPVKASVIKGQRVARGQQLGQVQTGLHTNIILGSVKKGLREALNTAVQL FT LGEYAGSVAAGPVGAKIGKELAKFVVSSVTKNSALGDGIHIGVRKNGIYINPLLFFGKI FT KPSVLLPNN" FT misc_feature complement(26261..26666) FT /note="Peptidase family M23/M37 Score = 36.2 E-value = FT 5.3e-08" FT CDS 27125..27988 FT /transl_table=11 FT /gene="rpsB" FT /locus_tag="TW318" FT /product="30s ribosomal protein S2" FT /note="Similar to Streptomyces coelicolor 30s ribosomal FT protein S2 RpsB or SCO5624 or SC2E1.41 SWALL:RS2_STRCO FT (SWALL:O31212) (310 aa) fasta scores: E(): 1.5e-50, 51.56% FT id in 287 aa, and to Spirulina platensis 30s ribosomal FT protein s2 rpsB SWALL:RS2_SPIPL (SWALL:P34831) (251 aa) FT fasta scores: E(): 1.1e-39, 45.71% id in 245 aa" FT /db_xref="GOA:Q83HZ7" FT /db_xref="InterPro:IPR001865" FT /db_xref="InterPro:IPR005706" FT /db_xref="InterPro:IPR020589" FT /db_xref="UniProtKB/Swiss-Prot:Q83HZ7" FT /protein_id="CAD66991.1" FT /translation="MFWRGGLPLVTIRNLLDNGVHFGHTTQRWNPKMKGFILTERCGSY FT ILDMRETIRGIVTAVDFIRDTVARGGEVLFIGTKRQAQQVIFKQASRVGQHYIAHRWLG FT GLLTNFSTVSKSLVRMKELEEARLDDSVSTKKEQLIRGRELQKLRRSLGGIRNMTKLPA FT LLWVVDTNREGIAVEEARKLGIPVVAILDSNCDPDLVQFPIPGNDDSIRSIELLTGIVA FT DAVAQGLVERHKAPQDDIEPMAEWEKQLLQSGDSSGETRPISGTDRPLDGDLSKGPAPQ FT DEELSD" FT misc_feature 27167..27809 FT /note="Ribosomal protein S2 Score = 273.4 E-value = FT 2.1e-79" FT CDS 28019..28840 FT /transl_table=11 FT /gene="tsf" FT /locus_tag="TW319" FT /product="elongation factor Ts" FT /note="Similar to Streptomyces coelicolor elongation factor FT Ts Tsf or SCO5625 or SC2E1.42 SWALL:EFTS_STRCO FT (SWALL:O31213) (278 aa) fasta scores: E(): 3e-39, 45.48% id FT in 277 aa" FT /db_xref="GOA:Q83NN3" FT /db_xref="InterPro:IPR000449" FT /db_xref="InterPro:IPR001816" FT /db_xref="InterPro:IPR009060" FT /db_xref="InterPro:IPR014039" FT /db_xref="InterPro:IPR018101" FT /db_xref="UniProtKB/Swiss-Prot:Q83NN3" FT /protein_id="CAD66992.1" FT /translation="MVDISMADVRLLRERLGVGVMDSRNALIEAGGDIERAVEILRLKG FT LKSAEKREGRSVSEGLVVSRQFATHAVLAELCCETDFVAKSDRFLALSERVADLVSDAD FT SLETALRVRCDEGSVADLIALEAAVLGENVALRRFARVEGSRFSVYMHRTSSDLPPQVG FT VILAYEGHDDATARFIAQHIAFAAPEYLSVGDIPQGILQRERDLLTEISRGEGKPEEVL FT PQIVEGRLVKLYKQNVLLEQDYVRDNKVTISKVLEATGLRVISFARFRVGT" FT misc_feature 28028..28148 FT /note="UBA/TS-N domain Score = 32.0 E-value = 9.5e-07" FT misc_feature 28187..28835 FT /note="Elongation factor TS Score = 216.4 E-value = FT 2.9e-62" FT CDS 28851..29546 FT /transl_table=11 FT /gene="pyrH" FT /locus_tag="TW320" FT /product="uridylate kinase" FT /EC_number="2.7.4.-" FT /note="Similar to Escherichia coli uridylate kinase PyrH or FT SmbA or b0171 or z0182 or ecs0173 SWALL:PYRH_ECOLI FT (SWALL:P29464) (240 aa) fasta scores: E(): 1.2e-29, 44.63% FT id in 233 aa, and to Streptomyces coelicolor uridylate FT kinase PyrH or SCO5626 or SC2E1.43 SWALL:O69913 FT (EMBL:AL023797) (253 aa) fasta scores: E(): 1.5e-46, 61.3% FT id in 230 aa" FT /db_xref="GOA:Q83HZ6" FT /db_xref="HSSP:1Z9D" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR011817" FT /db_xref="InterPro:IPR015963" FT /db_xref="UniProtKB/Swiss-Prot:Q83HZ6" FT /protein_id="CAD66993.1" FT /translation="MASRRVLLKLSGESFGGGAPLVDPDVVSAIASEIVRVSKTIQIAI FT VVGGGNYFRGAELSRRGMARDRADYMGMLGTVINALALQDFLEQAGGDTRVQSAISMSQ FT VAELYVPRRAERHLTKGRVVIFAAGAGMPYFSTDTVAVQRALEIKADIVLIAKNGVDGV FT YTDDPQINPNAKKIYKITYREALERGLRVVDSAALGLCMEHGLPMRVFGMESLRDAVSG FT LKVGTELSQ" FT misc_feature 28860..29484 FT /note="Amino acid kinase family Score = 203.3 E-value = FT 2.7e-58" FT CDS 29710..30255 FT /transl_table=11 FT /gene="frr" FT /locus_tag="TW321" FT /product="ribosome recycling factor" FT /note="Similar to Pseudomonas aeruginosa ribosome recycling FT factor Frr or pa3653 SWALL:RRF_PSEAE (SWALL:O82853) (185 FT aa) fasta scores: E(): 9.4e-15, 35.59% id in 177 aa, and to FT Streptomyces coelicolor ribosome recycling factor Frr or FT SCO5627 or SC6A9.40C SWALL:RRF_STRCO (SWALL:O86770) (185 FT aa) fasta scores: E(): 2.1e-21, 42.45% id in 179 aa" FT /db_xref="GOA:Q83HZ5" FT /db_xref="InterPro:IPR002661" FT /db_xref="InterPro:IPR015998" FT /db_xref="UniProtKB/Swiss-Prot:Q83HZ5" FT /protein_id="CAD66994.1" FT /translation="MGIMCSGDVSERMNKTIELLKEQFLSIHSGRVNSGQFEKVMVDCE FT GASVPLVSLASIRVLNANTIVVTPYDSALLSQIDRALRNVPNIGTPGNDGECIKIVMPQ FT LTEARRHEYVKQARVKAEEARVSARNIRRKARASLDAMGLAKDEIVRREKELDKLTKDV FT ISVVDDLLRHKESELLRL" FT misc_feature 29764..30244 FT /note="Ribosome recycling factor Score = 158.3 E-value = FT 9.2e-45" FT CDS 30324..31133 FT /transl_table=11 FT /locus_tag="TW322" FT /product="putative integral membrane phospholipid FT biosynthetic nucleotidyltransferase" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCO5628 or SC6A9.39C SWALL:O86769 FT (EMBL:AL031035) (391 aa) fasta scores: E(): 1.7e-18, 35.44% FT id in 268 aa, and to Escherichia coli phosphatidate FT cytidylyltransferase CdsA or Cds or b0175 or z0186 or FT ecs0177 SWALL:CDSA_ECOLI (SWALL:P06466) (249 aa) fasta FT scores: E(): 1.5e-15, 33.85% id in 192 aa" FT /db_xref="GOA:Q83NN2" FT /db_xref="InterPro:IPR000374" FT /db_xref="UniProtKB/TrEMBL:Q83NN2" FT /protein_id="CAD66995.1" FT /translation="MLKQRVQARTGRDLVLAIGVGLILGGLLLISLFVFLHLFVLVCIL FT VGVTCLAEIFTATHTRGIFIVRPFLTLSTVVLPVLAFFFASWFLPSIAFFMLTILLAQF FT FLRARFSLHSLFIFLYIPITVSLFAFIAAHPTGRLWVFFMLVTVIASDTFSYVFGTLFG FT RHLLAPRISPNKTWEGLIGGFFSSLFFGTLTGILLLHKSLLFSATAASILFLFAILGDL FT AESYIKRRLGVKDMSGILPGHGGMLDRVDSMLLNIFPILLLVHMNFV" FT misc_feature order(30360..30413,30423..30491,30510..30578,30588..30647, FT 30666..30734,30744..30812,30849..30917,30930..30983) FT /note="8 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 13-30, 34-56, 63-85, 89-108, FT 115-137, 141-163, 176-198 and 203-220" FT misc_feature 30732..31128 FT /note="Phosphatidate cytidylyltransferase Score = 170.2 FT E-value = 2.4e-48" FT misc_feature 30996..31076 FT /note="PS01315 Phosphatidate cytidylyltransferase FT signature." FT CDS 31281..32120 FT /transl_table=11 FT /gene="xthA1" FT /locus_tag="TW323" FT /product="exodeoxyribonuclease III" FT /EC_number="3.1.11.2" FT /note="Similar to Escherichia coli exodeoxyribonuclease III FT XthA or Xth or b1749 SWALL:EX3_ECOLI (SWALL:P09030) (268 FT aa) fasta scores: E(): 6.8e-14, 28.96% id in 290 aa, and to FT Streptomyces coelicolor putative exonuclease SCO6341 or FT SC3A7.09 SWALL:O86610 (EMBL:AL031155) (259 aa) fasta FT scores: E(): 6.4e-24, 40.07% id in 272 aa" FT /db_xref="GOA:Q83HZ4" FT /db_xref="HSSP:1AKO" FT /db_xref="InterPro:IPR004808" FT /db_xref="InterPro:IPR005135" FT /db_xref="InterPro:IPR020848" FT /db_xref="UniProtKB/TrEMBL:Q83HZ4" FT /protein_id="CAD66996.1" FT /translation="MRVGTWNVNSIRARLERVLAWLKNECIDVAALQETKVRTGDFPVD FT AFRDAGYYSEAHGLRGFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTDIPQEARAISA FT TTGGIRLYSLYVPNGREVGSPHFEYKLAWLKALASHVRTVLRRTPGIPLMLVGDFNIVT FT CEQDTADPDFQLPNDITCSGPEREAFQAILDTGMFDLIRPFAPIGFTSWSYQRQRFQNN FT QGLRIDFMLGSDSVQRRTIWGEIDRVQRRHLFGLTPSDHAPLVSVIDPPRRTFRRDD" FT misc_feature 31281..32082 FT /note="Endonuclease/Exonuclease/phosphatase family Score = FT 131.7 E-value = 9.2e-37" FT misc_feature 31944..31979 FT /note="PS00728 AP endonucleases family 1 signature 3." FT CDS 32139..32681 FT /transl_table=11 FT /locus_tag="TW324" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR019932" FT /db_xref="InterPro:IPR019933" FT /db_xref="UniProtKB/TrEMBL:Q83HZ3" FT /protein_id="CAD66997.1" FT /translation="MRKFLFRRTSPFALGYDKRQVDTFFSAAKVAYENSDPKLRSSLIR FT NITFKLRRRGYSPKQVDAALDRLERACIFKERQAYVALHGSQAWKEHVVSRIQQIADRL FT QKPPRKRFIRENWGYEPNSVDRVLDRVLGYLRRTGTLSEDEVRSAVFRPSYRGYKTGHV FT DAYLDEVRLIIIMLEWR" FT CDS complement(32911..33549) FT /transl_table=11 FT /locus_tag="TW325" FT /product="putative secreted protein" FT /note="Similar to Streptomyces coelicolor putative secreted FT protein SCO5029 or SCK7.02 SWALL:Q9FBP7 (EMBL:AL391754) FT (238 aa) fasta scores: E(): 1.2e-14, 47.36% id in 114 aa" FT /db_xref="UniProtKB/TrEMBL:Q83NN1" FT /protein_id="CAD66998.1" FT /translation="MMRSIRYKSLAWRLPRRELRKKEALRKRRGWPVRVAVATFTMTLL FT SGTPSGAYAFDDVYRSAWQGFENLQDLKKEGQTLALGGYFVSPHAQDSRAYTSRPLGSF FT SVLYKPVATSEIQSWALERVYASGWDYRQFTCLVLLWNKESGWNPYAMNRYSGAYGIPQ FT ALPGNKMKVAGDDWRTNPKTQVSWGLRYISARFGNPCGAWEHSVRKGWY" FT misc_feature complement(33388..33549) FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.986) with cleavage FT site probability 0.797 between residues 54 and 55" FT misc_feature complement(33394..33462) FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 30-52" FT CDS 33802..35424 FT /transl_table=11 FT /gene="groEL" FT /locus_tag="TW327" FT /product="60 kDa chaperonin" FT /note="Similar to Tropheryma whipplei 60 kDa chaperonin FT groL or groEL SWALL:CH60_TROWH (SWALL:Q9KJC0) (540 aa) FT fasta scores: E(): 4.7e-183, 99.81% id in 540 aa, and to FT Streptomyces albus G 60 kDa chaperonin 2 GroL2 or GroEL2 FT SWALL:CH62_STRAL (SWALL:Q00768) (539 aa) fasta scores: E(): FT 1.1e-139, 75.37% id in 540 aa" FT /db_xref="GOA:Q83NN0" FT /db_xref="InterPro:IPR001844" FT /db_xref="InterPro:IPR002423" FT /db_xref="InterPro:IPR018370" FT /db_xref="UniProtKB/Swiss-Prot:Q83NN0" FT /protein_id="CAD66999.1" FT /translation="MAKKITFNEDARRGLERGLNTLADTVKVTLGPRGRNVVLEKKWGA FT PVITNDGVTIAKEIELDDPYEKIGAELVKEVAKKTDDVAGDGTTTSVVLAQAMVREGLK FT NVAAGADPISLRRGIEKSVAAVSKALLTSAKEVETEAEIAACASISAGDPQIGDIIAQA FT LEKVGKEGVVTVEESNTFGTELEITEGMRFDKGYLSAYFVTDAERQETVFENPYILICD FT SKISSVKDLLPVVDKVIQSGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGD FT RRKMMLQDIAVLTGGQVISEEVGLKLENATLDLLGCARKVVVSKDETTIVDGAGSSDQI FT AGRVSQIRKELENSDSDYDREKLQERLAKLSGGVAVIRSGAATEVELKERKHRIEDAVR FT NAKAAVEEGIVAGGGAALLQSGTSALKDLQLTSEEAVGRNIVRSAIEAPLRQISLNAGL FT EPGVVVGKVSSLPQGHGLDASTGEYVDMLSRGISDPVKVTRSALENAASIAGLFLTTEA FT VVAEKPEPKPAPGPADPGAGMDF" FT misc_feature 33865..35368 FT /note="TCP-1/cpn60 chaperonin family Score = 660.1 E-value FT = 8.4e-196" FT misc_feature 35008..35043 FT /note="PS00296 Chaperonins cpn60 signature." FT CDS complement(35486..36241) FT /transl_table=11 FT /locus_tag="TW328" FT /product="putative integral membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83NM9" FT /protein_id="CAD67000.1" FT /translation="MLIIIASVTILALPSRVRSNQNRLSILMVSIIAFGLLQSFYDIEA FT GITAAAIFVGIALAKFLYWKELLDAILIAIFLYCIPPTGSEMQFVSIGILAFLANYKYF FT GKIAAIILSAVCFILAPAPLPVIFSFLACTAAILARKIPKIWRVVSYIPLLSAGILLSV FT NFTENIKFTGAIGSILIFCAAISALIRTWFFATDREINDSGKMLEFRAETLFPHGACVL FT LLSLPDVSPVTVLIFAMISTKSQFCKRMT" FT misc_feature complement(order(35531..35599,35660..35728,35741..35809, FT 35846..35914,35972..36031,36050..36109,36119..36172)) FT /note="7 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 24-41, 45-64, 71-90, 110-132, FT 145-167, 172-194 and 215-237" FT misc_feature complement(36185..36241) FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.674) with cleavage FT site probability 0.179 between residues 19 and 20" FT CDS 36443..37912 FT /transl_table=11 FT /gene="hom" FT /gene_synonym="thrA" FT /locus_tag="TW329" FT /product="homoserine dehydrogenase" FT /EC_number="1.1.1.3" FT /note="Similar to Corynebacterium glutamicum homoserine FT dehydrogenase Hom or ThrA or cgl1183 SWALL:DHOM_CORGL FT (SWALL:P08499) (445 aa) fasta scores: E(): 6.7e-54, 43.56% FT id in 443 aa" FT /db_xref="GOA:Q83HZ2" FT /db_xref="HSSP:1EBF" FT /db_xref="InterPro:IPR001342" FT /db_xref="InterPro:IPR005106" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR019811" FT /db_xref="UniProtKB/TrEMBL:Q83HZ2" FT /protein_id="CAD67001.1" FT /translation="MPLRNSKISGLITKQSSLGSVYILYNRVLGACVDYRSLKLALFGA FT GRVGSCVARFLLSNADELKIRTGGLDIELIGIGVKDLSKSRELDASYYTDDLEGLILRA FT DVVIELIGGLHPAKELITRALQVGADVVSANKTLISEHGRELLALASSVGAQFLYEAAV FT CAAIPVIRPLKDSLSGDVIQKISGIVNGTTNFILDRMESTGDSLENALKVAQDLGYAES FT DPSADIEGHDAAAKATILASLAFHADIPRTLVYREGISNITQETISAARASNKFVRLLA FT ICERMANDTDISVRVHPALIDRKHPLAAVRGNKNAIFVQAKLAGPLMFYGSGAGGLETA FT SAILGDVVSIARRYKAGSIPTSEIWIDNRRKRSVKVSPIDLIKTRYQFVLFAIQSPEAL FT AQIARTFAECKVLLDSLVQSRVDCSNLHTKLSESDVIMRLVVVTEVVTDSAISSVIVEL FT KNCSHVVSIVSVMRIEQGGFEETGLALPETA" FT misc_feature 36551..36938 FT /note="Homoserine dehydrogenase, NAD binding domain Score = FT 91.8 E-value = 9.7e-25" FT misc_feature 36944..37484 FT /note="Homoserine dehydrogenase Score = 250.4 E-value = FT 1.7e-72" FT misc_feature 37082..37150 FT /note="PS01042 Homoserine dehydrogenase signature." FT CDS 37919..38971 FT /transl_table=11 FT /gene="thrC" FT /locus_tag="TW330" FT /product="threonine synthase" FT /EC_number="4.2.3.1" FT /note="Similar to Bacillus sp. threonine synthase ThrC FT SWALL:THRC_BACSP (SWALL:P09123) (352 aa) fasta scores: E(): FT 4.9e-61, 49.14% id in 350 aa" FT /db_xref="GOA:Q83HZ1" FT /db_xref="HSSP:1E5X" FT /db_xref="InterPro:IPR000634" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR004450" FT /db_xref="UniProtKB/TrEMBL:Q83HZ1" FT /protein_id="CAD67002.1" FT /translation="MYFRGIINEYRSRLGLDADLKVVTLGEGNTPLVYSEALSSLTASS FT VWLKFDGANPTGSFKDRGMTVAVSKAVNSGVRTVICASTGNTSASAAAYSAAAGIECVV FT LIPEGFVSHGKLCQAVAHGARVLQIRGNFDSCLRVARELAEIHPVHLVNSINPDRISGQ FT KTAAFEIIDALGDAPDYHYLPVGNAGNYTAYYLGYSEEKVRGNSTHIPRIFGFQASGAA FT PIVSGHIVENPQSIATAIRIGNPASWKQALHAQHACNGYFGSIDDSGILEAQKLLARTC FT GLFVEPASAISVAGLLASKPPEGSSVVCTLTGHGLKDQQLAFRKSDGTEYSLPSLPGDS FT QSIASYLNLA" FT misc_feature 37985..38858 FT /note="Pyridoxal-phosphate dependent enzyme Score = 265.9 FT E-value = 3.8e-77" FT misc_feature 38069..38110 FT /note="PS00165 Serine/threonine dehydratases FT pyridoxal-phosphate attachment site." FT CDS 39012..40019 FT /transl_table=11 FT /gene="thrB" FT /locus_tag="TW331" FT /product="homoserine kinase" FT /EC_number="2.7.1.39" FT /note="Similar to Clostridium acetobutylicum homoserine FT kinase ThrB or cac1235 SWALL:KHSE_CLOAB (SWALL:Q97JN8) (296 FT aa) fasta scores: E(): 6.2e-11, 30.18% id in 318 aa, and to FT Streptomyces coelicolor homoserine kinase ThrB or SCO5356 FT or SCBAC5H2.25 SWALL:KHSE_STRCO (SWALL:Q9ADB2) (309 aa) FT fasta scores: E(): 1e-16, 42.67% id in 321 aa" FT /db_xref="GOA:Q83HZ0" FT /db_xref="InterPro:IPR000870" FT /db_xref="InterPro:IPR006204" FT /db_xref="InterPro:IPR013750" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q83HZ0" FT /protein_id="CAD67003.1" FT /translation="MRLEGCRNLSFTVKVPATSANLGPGFDSLGLALGMYSTLKVEILD FT VPGITIETRGSSQFPSDDSNLIVRSLLHVFASRGFTAPGLRLVSDFDFPPGRGLGSSAA FT AISSAVLAAQRIMSHASYPHDSAESFILATDIEGHPDNIAAALFGGLTIAWLRGSGEKT FT VSPSYRHDSSARQGTEPAYKKLVPHRAIRPVIFVPVNQQMSTVVARGLQPFSVPYTDAV FT FNLSRSALLVAALTQSPDVLLEATEDRLHQNYRADAMPETFSLIEHLRHAKLAAVVSGA FT GPSILVLTVDPAERLKAIDVVTSHAKGQWEHFMPAIDFEGARIFDGHDPLGPFS" FT misc_feature 39039..39984 FT /note="GHMP kinases putative ATP-binding protein Score = FT 133.0 E-value = 3.8e-37" FT CDS 40090..41454 FT /transl_table=11 FT /gene="rho" FT /locus_tag="TW332" FT /product="transcription termination factor Rho" FT /note="Similar to Streptomyces lividans transcription FT termination factor Rho SWALL:RHO_STRLI (SWALL:P52157) (707 FT aa) fasta scores: E(): 1.5e-46, 39.79% id in 387 aa, and to FT Micrococcus luteus transcription termination factor Rho FT SWALL:RHO_MICLU (SWALL:P52154) (690 aa) fasta scores: E(): FT 7.1e-48, 41.96% id in 386 aa, and to Staphylococcus aureus FT transcription termination factor Rho SWALL:Q9AGF7 FT (EMBL:AF333962) (443 aa) fasta scores: E(): 1.3e-39, 39.36% FT id in 348 aa" FT /db_xref="GOA:Q83NM8" FT /db_xref="HSSP:1PVO" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR011113" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR020003" FT /db_xref="UniProtKB/TrEMBL:Q83NM8" FT /protein_id="CAD67004.1" FT /translation="MSDGEDIRNLSLSKLRTLAIQRGIKSAYRYKKSDLLERLAAADKS FT VVDAADSPGESPITLDDLANAIPEGTPERQQTGDIRRVNEPDRVSITRERRGRSRRRRI FT EEGILDSSQLVPIAGVLDVLDSCAFIRTTGYSPGDSDIYVSLSQVKKYSLRKGDAVAGE FT VARVKSIDSYKQRHFPLVSVNTVNGLEFQQVTTRPAFESGMCVPPTRRLRITPKTAPVE FT KRIVDLVSPVAKGTRGLVRGPSKSGRTTVLHEIAAGLCEQNKELHLITLLVGIRPEEAT FT HMSRTLRGEVVVSSMECSPEEQVGVAELVLERSKRLVEQGRDVLLIVDSMTHLGRAYAL FT VGAPPSRLIGSAAELSALRPITSFFLSARCIENSGSITMLATVLSESESAFDRLVEYDL FT VAVSGMQLVLDKLASERRDFPAINPIRSSSRDEFTLLSASEQSEVKRLRVRSEGS" FT misc_feature 40543..41392 FT /note="ATP synthase alpha/beta family, nucleotide-binding FT domain Score = 62.7 E-value = 5.7e-16" FT misc_feature 41347..41376 FT /note="PS00152 ATP synthase alpha and beta subunits FT signature." FT CDS 41530..42573 FT /transl_table=11 FT /gene="prfA" FT /locus_tag="TW333" FT /product="peptide chain release factor 1" FT /note="Similar to Escherichia coli peptide chain release FT factor 1 PrfA or SueB or Uar or b1211 or z1982 or ecs1716 FT SWALL:RF1_ECOLI (SWALL:P07011) (360 aa) fasta scores: E(): FT 1.3e-47, 44.41% id in 322 aa, and to Streptomyces FT coelicolor peptide chain release factor 1 PrfA or SCO5360 FT or 2SC6G5.04 SWALL:RF1_STRCO (SWALL:Q9K4E4) (358 aa) fasta FT scores: E(): 3.2e-74, 55.11% id in 352 aa" FT /db_xref="GOA:Q83NM7" FT /db_xref="HSSP:1GQE" FT /db_xref="InterPro:IPR000352" FT /db_xref="InterPro:IPR004373" FT /db_xref="InterPro:IPR005139" FT /db_xref="UniProtKB/TrEMBL:Q83NM7" FT /protein_id="CAD67005.1" FT /translation="MFETIDTLLREHSIIEDRLSRCDASPSEMKDLSLRYSKLSRVKAA FT YEEFQKISLDLSAARELADDDPGFLVEIPVLTEKLSDAQARLQSLLTRRDENDHRDVIM FT EIKGGEGGAESALFAADLLRMYAYFADSNGWKVEILSYSENTLGGYKDVQLAIRKTPSS FT THGVWELLKYEGGVHRVQRVPATESQGRIHTSTTGVLVFPEVDAPGEIEITNDEIRIDV FT FRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRESAMRILRARLIAKRQDE FT IEKTTHAARKSQIRAMDRSERIRTYNFPENRVVDHRTGYKAYNLDQVLNGDVSQLIRSC FT IEADTDV" FT misc_feature 41701..42049 FT /note="PCRF domain Score = 123.5 E-value = 2.8e-34" FT misc_feature 42139..42478 FT /note="Peptidyl-tRNA hydrolase domain Score = 212.9 E-value FT = 3.4e-61" FT CDS 42577..43434 FT /transl_table=11 FT /locus_tag="TW334" FT /product="putative peptide chain release factor FT methyltransferase" FT /EC_number="2.1.1.-" FT /note="Similar to Escherichia coli protein FT methyltransferase HemK or b1212 SWALL:HEMK_ECOLI FT (SWALL:P37186) (277 aa) fasta scores: E(): 1.1e-18, 30.03% FT id in 273 aa" FT /db_xref="GOA:Q83HY9" FT /db_xref="HSSP:1NV8" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR004556" FT /db_xref="InterPro:IPR013217" FT /db_xref="UniProtKB/TrEMBL:Q83HY9" FT /protein_id="CAD67006.1" FT /translation="MFRDLLLWGTRRLSNSLSPRVESEILLSFACNISRECVMRHTLLS FT TGSVSPIEVEKYKKLIAQRSEGYPVQYLVRTSGFYEHDILVGPGALVPRPETEILVQRV FT LTELCTTGTLIRSVWDLGTGTGCITLALASRATDIEYLAVDKSNSAIQWAEKNLRHLRN FT VTIRKADFTVDSDLLALLSEFGPPDVVVANPPYLPQSVMHEKYEPYMALCGGGPEGLDL FT LRAVARASSIVLANSGLLFLEHLPDQSQSLRVSLEAMGFCDIESFCDLNDRLRFSSAKI FT IRLD" FT misc_feature 43144..43164 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT CDS 43483..44160 FT /transl_table=11 FT /locus_tag="TW335" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO5362 or 2SC6G5.06 SWALL:Q9K4E2 (EMBL:AL359152) FT (215 aa) fasta scores: E(): 9.1e-23, 44.44% id in 189 aa" FT /db_xref="HSSP:1HRU" FT /db_xref="InterPro:IPR004388" FT /db_xref="InterPro:IPR006070" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/TrEMBL:Q83HY8" FT /protein_id="CAD67007.1" FT /translation="MPQTFNCNKDPLSAFRAAKRSISSGGVIVVPTDTVYGLAADAFQP FT EAVGRLLEIKGRTAAPPVLVGSIETFQAIVDVLPEPALALAKRFWPGPLTLVLRTRPGL FT LWGDTVAVRIPRHSFLLQLLDEIGPLAVSSANISGRRPALSVRSARGSLRDKPAMYIDG FT DRIDNPDRVPSSIVDLTDFCEDSAGRIFEGVSPKTAQPRLLRDGAIPWKSLEKAMQMKL FT VKQ" FT misc_feature 43540..44101 FT /note="yrdC domain Score = 122.0 E-value = 8e-34" FT CDS 44207..45307 FT /transl_table=11 FT /locus_tag="TW336" FT /product="putative glycosyl transferase" FT /note="Similar to Mycobacterium tuberculosis putative FT undecaprenyl-phosphate FT alpha-N-acetylglucosaminyltransferase Rfe or rv1302 or FT mt1341 or mtcy373.22 SWALL:RFE_MYCTU (SWALL:Q10606) (404 FT aa) fasta scores: E(): 3.8e-34, 34.98% id in 363 aa, and to FT Yersinia enterocolitica WbcO protein SWALL:Q56918 FT (EMBL:Z47767) (341 aa) fasta scores: E(): 1.6e-10, 27.18% FT id in 320 aa" FT /db_xref="GOA:Q83HY7" FT /db_xref="InterPro:IPR000715" FT /db_xref="InterPro:IPR018480" FT /db_xref="InterPro:IPR018481" FT /db_xref="UniProtKB/TrEMBL:Q83HY7" FT /protein_id="CAD67008.1" FT /translation="MIVYLSVALFAALVTATSVYCLLKIAPKFWALREVRPRDVHTVPT FT LRIGGIPMFVAFLFSIALARFIPYFSDVFRTADPVLTSLVIAVSVITLLGFLDDLFELH FT WLIKLLGQIFSAAIVSVMSRGIFHSFTGGDLSWLLTIASIVLIVTTMNAINFIDGLDGL FT AAGVCLIGNGVFFVYIYFFTREISPSNYFNLVGLLAAILFGICAGFIPFNWRPAKLFMG FT DSGALLLGLVMSVAATTAVAQASAVTFVRRAHYVPAFIPILLPFAVLGLPILDLLFAIM FT RRLLSFKSPFNPDKKHLHHRMLHMGHSSVATVVIFYAWSGVVSGGMLLFLFTSTIFAVL FT FLLFGVLVCLIFTFLPIVRKRSWNRN" FT misc_feature order(44216..44284,44345..44413,44441..44500,44519..44587, FT 44615..44674,44693..44752,44780..44848,44882..44950, FT 44978..45046,45134..45202,45212..45280) FT /note="11 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 4-26, 47-69, 79-98, 105-127, FT 137-156, 163-182, 192-214, 226-248, 258-280, 310-332 and FT 336-358" FT misc_feature 44447..44942 FT /note="Glycosyl transferase Score = 107.7 E-value = FT 1.6e-29" FT CDS 45348..45785 FT /transl_table=11 FT /gene="atpI" FT /locus_tag="TW337" FT /product="ATP synthase protein I" FT /note="Similar to Streptomyces coelicolor ATP synthase FT protein I AtpI or SCO5366 or 2SC6G5.10 SWALL:ATPZ_STRCO FT (SWALL:P50015) (144 aa) fasta scores: E(): 5.9, 20.63% id FT in 126 aa" FT /db_xref="UniProtKB/TrEMBL:Q83NM6" FT /protein_id="CAD67009.1" FT /translation="MAASRTNNADSVILLFRRILLVCPAFTLVSYLLLGILFFYIAGQR FT GVLGVLLSGALSVFFMSSTVLSMIVAGKFRKSPLFLSALPLAVMSGWVAKIVVSLIFVF FT SLKNQMWFDGFAFFLCTTLICVGSLVIDTLLVLRSGVFDSI" FT misc_feature order(45405..45473,45492..45560,45588..45656,45690..45758) FT /note="4 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 20-42, 49-71, 81-103 and FT 115-137" FT CDS 45786..46601 FT /transl_table=11 FT /gene="atpB" FT /locus_tag="TW338" FT /product="ATP synthase A chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase A FT chain AtpB SWALL:ATP6_STRLI (SWALL:P50012) (281 aa) fasta FT scores: E(): 9.7e-26, 34.2% id in 269 aa, and to FT Brevibacterium flavum H+-ATPase A subunit atpB SWALL:Q9ETX4 FT (EMBL:AB048368) (322 aa) fasta scores: E(): 1.5e-41, 48.88% FT id in 270 aa" FT /db_xref="GOA:Q83HY6" FT /db_xref="InterPro:IPR000568" FT /db_xref="UniProtKB/TrEMBL:Q83HY6" FT /protein_id="CAD67010.1" FT /translation="MSIVFSGGGLLLSDSCQAGEFCGPSVEEFAPSALLFHGTFLEVNR FT IILIRFLAVGLIIAFFWLSLRRPKPVPGKFQSLIELCLEFVRKNIAEDILGKDAHRFLP FT LLTGIFFLTLSMNIMGIIPGLNIAGTSVIGLPLVMALVASVSFVYAGFKRHGFRYMSMT FT LFPAGVPRPLYILVAPIEFLSVFILRPITLTLRLTMNMMAGHLLLVLCFLATDFLFFTV FT GGAFAVLGIGTLLIGLAFTLFEIAVCFLQAYIFTLLTGVYIELSLADEH" FT misc_feature order(45921..45980,46092..46160,46173..46241,46302..46370, FT 46434..46502,46521..46589) FT /note="6 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 46-65, 103-125, 130-152, FT 173-195, 217-239 and 246-268" FT misc_feature 46080..46578 FT /note="ATP synthase A chain Score = 111.9 E-value = FT 8.9e-31" FT CDS 46645..46872 FT /transl_table=11 FT /gene="atpE" FT /locus_tag="TW339" FT /product="ATP synthase C chain" FT /EC_number="3.6.3.14" FT /note="Similar to Bacillus subtilis ATP synthase C chain FT AtpE SWALL:ATPL_BACSU (SWALL:P37815) (70 aa) fasta scores: FT E(): 6.5e-07, 49.18% id in 61 aa" FT /db_xref="GOA:Q83HY5" FT /db_xref="HSSP:1WU0" FT /db_xref="InterPro:IPR000454" FT /db_xref="InterPro:IPR002379" FT /db_xref="InterPro:IPR005953" FT /db_xref="InterPro:IPR020537" FT /db_xref="UniProtKB/Swiss-Prot:Q83HY5" FT /protein_id="CAD67011.1" FT /translation="MGSVLAEVAGSLASIGYGLAAIGSAIGVGIVVGKTVESVARQPEL FT AKRLTVLMYVGVAFTEALALIGIGTYFLFR" FT misc_feature order(46672..46740,46798..46866) FT /note="2 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 10-32 and 52-74" FT misc_feature 46678..46867 FT /note="ATP synthase subunit C Score = 67.7 E-value = FT 1.8e-17" FT misc_feature 46762..46827 FT /note="PS00605 ATP synthase c subunit signature." FT CDS 46894..47412 FT /transl_table=11 FT /gene="atpF" FT /locus_tag="TW340" FT /product="ATP synthase B chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase B FT chain AtpF SWALL:ATPF_STRLI (SWALL:P50013) (181 aa) fasta FT scores: E(): 1.2e-10, 32.31% id in 164 aa" FT /db_xref="GOA:Q83HY4" FT /db_xref="InterPro:IPR002146" FT /db_xref="InterPro:IPR005864" FT /db_xref="UniProtKB/Swiss-Prot:Q83HY4" FT /protein_id="CAD67012.1" FT /translation="MKFAQPHNPLLPSVPDIVFSAIVLAIVLPFFWWFVIPRISKLLSD FT RSSLIEGKISEAASAHARALETLELRKQQLDEAKSEASQIRQEARDDAQLILQQARETA FT DETAERVMLHAREQIQAEKAAALLSLRSEIATLALAAAGKAVSEKLDDDKKSRELVSAS FT IAKMAEDAG" FT misc_feature 46936..47004 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 15-37" FT misc_feature 46939..47401 FT /note="ATP synthase B/B' CF(0) Score = 89.7 E-value = FT 4.3e-24" FT CDS 47402..48190 FT /transl_table=11 FT /gene="atpH" FT /locus_tag="TW341" FT /product="ATP synthase delta chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase delta FT chain AtpH SWALL:ATPD_STRLI (SWALL:P50008) (272 aa) fasta FT scores: E(): 3.2e-08, 27.27% id in 264 aa" FT /db_xref="GOA:Q83HY3" FT /db_xref="InterPro:IPR000711" FT /db_xref="InterPro:IPR020781" FT /db_xref="UniProtKB/Swiss-Prot:Q83HY3" FT /protein_id="CAD67013.1" FT /translation="MPGSSSRSSLAHLRNRLSECSDLQSLYEVAVLLAISRRLRSSLVS FT RSLSCVSKQKLIAELTGKDPDAFICMAVSLRWSEPIDLLYAFEEMFIRASCTRRFADCR FT DFLDELFWVSSIVDSHKILDKTLSARFLPAYSKKQLISGVFAGAHEGTLAVLEYFACYM FT QKKRAFRECVFFAEKIVADELGAQIADVTTERPLSREQRDELVDVLSRRFKRRIILREV FT INEKVFGGVRVQVNHSVIDDTVAVHLNNLALSFGALETFS" FT misc_feature 47687..48164 FT /note="ATP synthase delta (OSCP) subunit Score = -30.5 FT E-value = 2.2e-05" FT misc_feature 48050..48109 FT /note="PS00389 ATP synthase delta (OSCP) subunit FT signature." FT CDS 48201..49829 FT /transl_table=11 FT /gene="atpA" FT /locus_tag="TW342" FT /product="ATP synthase alpha chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase alpha FT chain AtpA SWALL:ATPA_STRLI (SWALL:P50001) (528 aa) fasta FT scores: E(): 3.5e-126, 64.96% id in 508 aa" FT /db_xref="GOA:Q83HY2" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR000793" FT /db_xref="InterPro:IPR004100" FT /db_xref="InterPro:IPR005294" FT /db_xref="InterPro:IPR017458" FT /db_xref="InterPro:IPR018118" FT /db_xref="InterPro:IPR020003" FT /db_xref="UniProtKB/Swiss-Prot:Q83HY2" FT /protein_id="CAD67014.1" FT /translation="MSKQPIITSEEVRGVIRNLLDSTLSAAREANEFEVGRVVDAADGV FT AHIEGLPALMASELVEFSNGTFGVTLNLDEDLAGVVVLGEFDGIVEGMDVRSTGRVLSI FT PVGDAFLGRVVDPLGRPVDGLGEVPHETYRELELQAAGVMQRRSVHEPIQTGIKAIDTM FT IPIGRGQRQLIIGDRQTGKTTIAIDTIINQKDNWSDPEKRVFCIYVAIGQKGSTIAGVK FT RVLEEAGCMEYTTIVATPASDPAGFKYIAPYSGSAIGQHWMYQGRHVLIVFDDLSKQAE FT AYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDEMGGGSMTGLPIIETKANDIS FT AYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGDAQIKSIKKVSGMLKLEL FT AQYRALEAFSMFASDLDAVSRRQLDRGARLSELLRQQQQSPYPVEDQVVSIWVGSNGYI FT DDIPLSDVLDFERDLLEYLRNRTSILDDLRTCGDLTDALLERLKEAVESFKNKVYFMRV FT DEREKDPLEDENIGQEELVRSRRAN" FT misc_feature 48291..48495 FT /note="ATP synthase alpha/beta family, beta-barrel domain FT Score = 66.7 E-value = 3.4e-17" FT misc_feature 48504..49347 FT /note="ATP synthase alpha/beta family, nucleotide-binding FT domain Score = 503.6 E-value = 1.1e-148" FT misc_feature 48726..48749 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 49302..49331 FT /note="PS00152 ATP synthase alpha and beta subunits FT signature." FT misc_feature 49353..49644 FT /note="ATP synthase alpha/beta chain, C terminal domain FT Score = 86.0 E-value = 5.2e-23" FT CDS 49849..50859 FT /transl_table=11 FT /gene="atpG" FT /locus_tag="TW343" FT /product="ATP synthase gamma chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase gamma FT chain AtpG SWALL:ATPG_STRLI (SWALL:P50007) (302 aa) fasta FT scores: E(): 4.5e-22, 43.07% id in 332 aa" FT /db_xref="GOA:Q83HY1" FT /db_xref="HSSP:1FS0" FT /db_xref="InterPro:IPR000131" FT /db_xref="UniProtKB/TrEMBL:Q83HY1" FT /protein_id="CAD67015.1" FT /translation="MGAQLRVYRGKAASASVTKKITSAMELIAASRIVRAREKCGAFAP FT YAAALSRAVSTVLSYSDERHPLITQIEHPRRSAILVFASDRGLAGSFNAQVMNEAVQLG FT DNLTERSIETDYYLIGRKAVNFFNFRKIPFVQSWIGSSERPTFEMAQEISRTIFSCFLP FT ARQDNKHDLGAQVVEAENIDMPHTPDMGDMQNNTFRRKVDEVYIVFNRFVNLVNQVPTA FT FRLIPMEVVDEVSSSSNIQREHDRPVLPLYSFEPDVTSVLDELLKEYVESRVFDTLLQS FT ATAKHAATQRAMKSASDNADKLIEKYTRLANNARQAEITQQISEIIGGAGALDSG" FT misc_feature 49855..50845 FT /note="ATP synthase Score = 294.3 E-value = 1.1e-85" FT CDS 50908..52332 FT /transl_table=11 FT /gene="atpD" FT /locus_tag="TW344" FT /product="ATP synthase beta chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase beta FT chain AtpD SWALL:ATPB_STRCO (SWALL:P50004) (477 aa) fasta FT scores: E(): 1.2e-122, 72.89% id in 476 aa" FT /db_xref="GOA:Q83HY0" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR000793" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004100" FT /db_xref="InterPro:IPR005722" FT /db_xref="InterPro:IPR018118" FT /db_xref="InterPro:IPR020003" FT /db_xref="UniProtKB/Swiss-Prot:Q83HY0" FT /protein_id="CAD67016.1" FT /translation="MTGDAVGRIVRVTGSVVDVEFSRNNLPGVFNALKTRVNRSGKEIE FT ITLEVAQHLGDDLVRTVAMQSTDGLIRGQEVLDTGGHITVPVGDATKGRVFNVVGEVLN FT SNGEDIKFDEYWSIHRKPPEFSLLESKTQLFETGIKVIDLLTPYVQGGKIGLFGGAGVG FT KTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIREMQDAGVFDKTALVFGQMDEPP FT GTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRIPSAVGYQPNL FT ADEMGVLQERITSTRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASKGL FT YPAVDPLASTSRILDPKYIGKDHYRVAVTVKQILQRDKELREIIAILGIDELSEEDRVT FT VARARRIEQFLSQNTYMAKKFTGVDGSTVPLQETIDGFDAICRGDCDHIPEQAFFNVGG FT LEDVERKWSKLQKELG" FT misc_feature 50932..51145 FT /note="ATP synthase alpha/beta family, beta-barrel domain FT Score = 94.3 E-value = 1.7e-25" FT misc_feature 51154..51976 FT /note="ATP synthase alpha/beta family, nucleotide-binding FT domain Score = 454.9 E-value = 4.9e-134" FT misc_feature 51379..51402 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 51931..51960 FT /note="PS00152 ATP synthase alpha and beta subunits FT signature." FT misc_feature 51985..52318 FT /note="ATP synthase alpha/beta chain, C terminal domain FT Score = 152.0 E-value = 7.5e-43" FT CDS 52334..52618 FT /transl_table=11 FT /gene="atpC" FT /locus_tag="TW345" FT /product="ATP synthase epsilon chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase FT epsilon chain AtpC SWALL:ATPE_STRCO (SWALL:P50011) (123 aa) FT fasta scores: E(): 7.2e-05, 35.48% id in 93 aa" FT /db_xref="GOA:Q83HX9" FT /db_xref="InterPro:IPR001469" FT /db_xref="InterPro:IPR020546" FT /db_xref="UniProtKB/TrEMBL:Q83HX9" FT /protein_id="CAD67017.1" FT /translation="MATFETKVVSAKSFSLTCSATLVVARTRAGEIGIMAGHEPLLAAL FT VPGSVKIFDSVNSVRALKTGRGFLCMNNNVLEIVASDIEVDTLEQLHGA" FT misc_feature 52340..52586 FT /note="ATP synthase, Delta/Epsilon chain, beta-sandwich FT domain Score = 24.1 E-value = 6.8e-06" FT misc_feature 52676..52744 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 15-37" FT CDS 52790..53062 FT /transl_table=11 FT /gene="rpsO" FT /locus_tag="TW346" FT /product="30s ribosomal protein S15" FT /note="Similar to Escherichia coli 30s ribosomal protein FT S15 RpsO or SecC or b3165 SWALL:RS15_ECOLI (SWALL:P02371) FT (88 aa) fasta scores: E(): 7.7e-15, 58.22% id in 79 aa" FT /db_xref="GOA:Q83HX8" FT /db_xref="InterPro:IPR000589" FT /db_xref="InterPro:IPR005290" FT /db_xref="InterPro:IPR009068" FT /db_xref="UniProtKB/Swiss-Prot:Q83HX8" FT /protein_id="CAD67018.1" FT /translation="MARKLDMDKGAIISEYGLSKGDTGSPEVQIALLTARIARLTQHLK FT EHSFDHHSRRGLMLMVGRRRRLLSYLHGVDVSRYRAILSNLGLRR" FT misc_feature 52796..53054 FT /note="Ribosomal protein S15 Score = 122.3 E-value = FT 6.2e-34" FT misc_feature 52907..52999 FT /note="PS00362 Ribosomal protein S15 signature." FT CDS 53107..55314 FT /transl_table=11 FT /gene="pnp" FT /locus_tag="TW347" FT /product="mRNA processing exonuclease" FT /note="Similar to Streptomyces antibioticus guanosine FT pentaphosphate synthetase GpsI SWALL:Q53597 (EMBL:U19858) FT (740 aa) fasta scores: E(): 1.3e-101, 60.97% id in 738 aa, FT and to Yersinia enterocolitica polyribonucleotide FT nucleotidyltransferase Pnp SWALL:PNP_YEREN (SWALL:O34275) FT (706 aa) fasta scores: E(): 1.7e-59, 42.11% id in 729 aa" FT /db_xref="GOA:Q820Y9" FT /db_xref="HSSP:1SRO" FT /db_xref="InterPro:IPR001247" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR004088" FT /db_xref="InterPro:IPR012162" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR014069" FT /db_xref="InterPro:IPR015847" FT /db_xref="InterPro:IPR015848" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018111" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:Q820Y9" FT /protein_id="CAD67019.1" FT /translation="MQFSEGVIDNGRFGTRTIRFETGRLARQAQGSVVAYLDGETMLLS FT STSVGKQPKEDCDFFPLTVDVEERSYAAGKIPGSYFRREGRPSTEAILACRLIDRPLRP FT SFNAGLRNEVQVIVTVLSIAPGEFYEALAINAASASTLVSGLPFSGPIGGVRLALIDGQ FT WVAFPRYEDLSGAVFDLTVAGRVFVNESGKEDIAIMMVEAEATEPAWDLIHSHGAKKPN FT EEVIEEGIESAKVFIRTLCDIQRDLASKLSLSHTEPDLYPDYSDSVHSFVEGLVKSDLE FT KVYRGNHDSGYAPNALSASDEIKQKAYDAFHDAVLSGRFDQDSLSQFPHAYKAVLKDVV FT RTCVLEGFARMDGRGLSDIRPLDAEVQVVPRVHGSAVFQRGETQVLGVTTLNMLKMEQQ FT IDSLAPIVSKRYIHHYNFPPYSTGEVGRVGSPKRREIGHGFLAERALVPVLPSREDFPY FT AIRQVSEALGSNGSTSMGSVCASTLSLLNAGVPLRAPVAGIAMGLISGRVDGEMRYVTL FT TDISGSEDALGDMDFKVAGTSDFITALQLDTKLDGIPAHVLSEALAHARSARLAILDVL FT TRVIDSPDQMSEYAPRVVRVKIPVQKIGELIGPKGKVINSIQDETGAEISIEDDGTVYI FT GSSQADSSEKAVAMVNSIVNPVEPCVGSQFLGTVVKNMPFGSFISLVPGKDGLLHISEI FT RKMVDGRHLESVDEVLSVGQKVLVEVSKIDDRGKLCLVAVK" FT misc_feature 53146..53545 FT /note="3' exoribonuclease family, domain 1 Score = 111.4 FT E-value = 1.2e-30" FT misc_feature 53554..53719 FT /note="3' exoribonuclease family, domain 2 Score = 20.7 FT E-value = 1.3e-05" FT misc_feature 53908..54169 FT /note="Polyribonucleotide nucleotidyltransferase, RNA FT binding domain Score = 7.5 E-value = 0.00036" FT misc_feature 54178..54577 FT /note="3' exoribonuclease family, domain 1 Score = 162.4 FT E-value = 5.4e-46" FT misc_feature 54586..54808 FT /note="3' exoribonuclease family, domain 2 Score = 82.4 FT E-value = 6.5e-22" FT misc_feature 54889..55015 FT /note="KH domain Score = 41.9 E-value = 1e-09" FT misc_feature 55078..55309 FT /note="S1 RNA binding domain Score = 39.9 E-value = FT 4.1e-09" FT CDS 55342..56280 FT /transl_table=11 FT /locus_tag="TW348" FT /product="putative cation efflux protein" FT /note="Similar to Alcaligenes eutrophus cobalt-zinc-cadmium FT resistance protein CzcD SWALL:CZCD_ALCEU (SWALL:P13512) FT (316 aa) fasta scores: E(): 8e-25, 34.72% id in 288 aa, and FT to Escherichia coli zinc transporter ZitB or b0752 FT SWALL:ZITB_ECOLI (SWALL:P75757) (313 aa) fasta scores: E(): FT 1.6e-24, 31.92% id in 307 aa" FT /db_xref="GOA:Q83NM5" FT /db_xref="InterPro:IPR002524" FT /db_xref="UniProtKB/TrEMBL:Q83NM5" FT /protein_id="CAD67020.1" FT /translation="MFGVLLHGHTHSSFDVHINVSIYKRLFIALCLTVGFTLIELLAVY FT LSASVTLASDAGHMFIDSLGLFNALIAARLVAKSNRNSHRTYGLYRVEVFSAGVSILIM FT FFLAFLIAKESIMRLVYPEEHISGWVIFVTGIAGLLVNLSAVLVLHSAKQKGINLRAAY FT MEVLSDAIASVSVMLSAILIILTGLTIIDSIAAIAIVLFICYRAAKLGKEVIRILLQAS FT PVDIQEVESSLLGIDGVISVDHLHAWTLSDEKHIATANILIHKQTDQNKVLVEAERILY FT EQYGILHTTLQISPMRLESRLACGGPVISHR" FT misc_feature order(55417..55485,55513..55572,55609..55677,55720..55788, FT 55807..55875,55888..55956) FT /note="6 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 26-48, 58-77, 90-112, FT 127-149, 156-178 and 183-205" FT misc_feature 55417..56239 FT /note="Cation efflux family Score = 222.9 E-value = FT 3.3e-64" FT CDS complement(56264..57343) FT /transl_table=11 FT /locus_tag="TW349" FT /product="conserved hypothetical integral membrane protein" FT /note="Similar to Clostridium acetobutylicum predicted FT permease cac1677 SWALL:Q97IG4 (EMBL:AE007677) (341 aa) FT fasta scores: E(): 4.9e-14, 25.91% id in 328 aa" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:Q83HX7" FT /protein_id="CAD67021.1" FT /translation="MSRIDTSNNDKRTAGVFHIYQPFLTGFRATLGVGLGILCCLLILR FT MGVLFAYIGLALFITLAIEPLISALVKLGISRGVSVVLLLLFFSAFLGVALWLIIPILT FT SETALLWKTVSSFMTEGNYRQFISLLRKAIPDFDFNELLQQGWLWIQNNVTTITGSVVN FT IGIGIVNTVTGIVIVLILTIYFSATLPTIKATGYKLVPASRREFVKDTLEDVLSSVGRY FT TAGQFLLASINGTLTLLIFSILQFKYPILMAFIAFIGSMIPLVGTISSSALISGITLFS FT AQGWTVWAVVIYYLVYMNVEAYVISPKIMKKAVSVPGSLVVISALAGGMLAGVPGAVVA FT VPAAASIVVLIKRVLIDAK" FT misc_feature complement(56281..57244) FT /note="Domain of unknown function DUF20 Score = 138.3 FT E-value = 9.5e-39" FT misc_feature complement(order(56291..56386,56423..56491,56519..56587, FT 56606..56674,56795..56863,57035..57103,57131..57199, FT 57218..57286)) FT /note="8 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 20-42, 49-71, 81-103, FT 161-183, 224-246, 253-275, 285-307 and 320-351" FT CDS complement(57354..59045) FT /transl_table=11 FT /locus_tag="TW350" FT /product="putative low complexity hydrophilic protein" FT /note="N-terminal region similar to that of Streptomyces FT reticuli AbpS protein SWALL:O07481 (EMBL:Z97071) (311 aa) FT fasta scores: E(): 3.2e-06, 26.68% id in 296 aa" FT /db_xref="UniProtKB/TrEMBL:Q83NM4" FT /protein_id="CAD67022.1" FT /translation="MNKKQSEFPQVFRGYDRDEVDRRIASLLRDLSAARAENAARKQQI FT EDRDGDISDLKQRISSLQRELDVMKESRFSGIGSHLETSLKMAEQQAQRLLSEAEAEAA FT RLRKTATEEVNNLRREAREFFESKLEQAKENAKEMVSSAEKQAQDIMAAAKTNSSRLRE FT DSLRGANSIRSAVNTEVSEMRTVAQREIESLKASAEKEASQILHNANQEFSRLQQKNLK FT IQQEITEQETRFEEELANRRGNFEAECREKESSIKELEAQTELSLNAQREALRVELEQK FT RKVFEADLASESVNRRAELSREIAELRAKEQEDIARKTALNLQIERELIENKNRMEQAM FT LQHNELMGHRKAELEAELAGLRQNFDDERRQRLQELEAELAQKRSAGEAEIEELTQRSG FT IIRAELEAELAGLRQEANNRLKLEQDEAVGQLKNYIDQASATLGSINREIADQRTYLEQ FT MKESATKESEDLRFRAKEQASQILSEAKEQASQILSEARAEKYELIAETEKQLVDLRSE FT RDSIASYFQNLSEIVQATALNSTDIPSSVSDDSCTLHEATDKQDNQ" FT CDS 59069..60745 FT /transl_table=11 FT /locus_tag="TW351" FT /product="putative integral membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83NM3" FT /protein_id="CAD67023.1" FT /translation="MYARFYCSGFGVLVLRLKISVFCLLFAGIFLLASAVLQQLFFVEL FT FGYKKDHFSTSSGYILLRENELFEQPDMSVQVSITPRGNPEPFEKSAGIYTAYSSEIQE FT WLKHYSYSVFDFAANTLSLGGSGKDPMSFLARNRDFFISQELPDKNGRIRLNPPRGVSV FT LLQIPGPAMVEVVRITPMAGLFMWLPLIVGLLLITLGLIVYVWSKFKSKRNPYGRRSTY FT ISGYTKRRPLRHFFTFITCLPLVAGTSIACGSDKDNISSLELLREMHAHKIAKRVVETL FT HVADSRLSDPQSAMAGTALRLRQAAYKVLRKNKNAKVDLPAFDTAASVRLILPENTKSW FT PRVLLLVIDSSDGPSGEKLPPLAVLLRQNNPLDNYLIEYLARLTPNIVLPKLPTAEDGS FT ILVRPESKLLAVQPSDIIAKYRAMLNTAGSSKLFDQSADILASQIRSSRSAKQKSLAGN FT SIIIFRDRQSGQIGMTTANGGALVFVDMLELERVIPSGGYSIVPQSGGEVSLLSGIVSS FT LRGIETTYSSQLLFYIPTVGSNERIALLGFTRGIASAREVR" FT misc_feature 59069..59173 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.811) with cleavage FT site probability 0.388 between residues 35 and 36" FT misc_feature order(59129..59197,59618..59686,59762..59830) FT /note="3 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 21-43, 184-206 and 232-254" FT CDS 60742..61893 FT /transl_table=11 FT /locus_tag="TW352" FT /product="putative aminotransferase" FT /note="Similar to Rhodobacter sphaeroides cysteine FT desulfurase NifS SWALL:NIFS_RHOSH (SWALL:Q01179) (387 aa) FT fasta scores: E(): 6.7e-25, 31.34% id in 386 aa, and to FT Methanosarcina thermophila probable cysteine desulfurase FT IscS or NifS SWALL:ISCS_METTE (SWALL:P57795) (404 aa) fasta FT scores: E(): 1.2e-19, 32.29% id in 387 aa" FT /db_xref="GOA:Q83HX6" FT /db_xref="HSSP:1ECX" FT /db_xref="InterPro:IPR000192" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR016454" FT /db_xref="UniProtKB/TrEMBL:Q83HX6" FT /protein_id="CAD67024.1" FT /translation="MMFGTYLDYAAHAPLMPEAAAVYQQFCNMPGNASSSHFYGRHMRA FT VIEKAKEGILAALNAPPGTEVSFTSGGTESINTCIYGTYLFRNSFVSHINDGNISKKII FT LANPADHTAQLSSIKSLPYAEIVWLPIDKYARVLPDSLEQAILQKDPNKIALFACTWVN FT SELGTISPVYDYARICQTYDIPVHIDSVAATSLIDFSRLVGKVSLSIAGHKIGAPPGTG FT AILSSFSFPPLLRGGNQQRLRSGSVDPLGSTSLSIALNRKVQSLRALRQRLVEVVLSAV FT PEAVVNSDTQDSSDAILNVSFPGCSSDTLLYLFDEAKIAISSGSACHSGVIQPSHVMSA FT VGLKPDLAKATLRFSLGWASTFDDIEVLSQNLGDIYKKALIAK" FT misc_feature 60784..61843 FT /note="Aminotransferase class-V Score = 100.2 E-value = FT 2.8e-27" FT CDS 61916..62995 FT /transl_table=11 FT /gene="trmU" FT /locus_tag="TW353" FT /product="probable tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase" FT /EC_number="2.1.1.61" FT /note="Similar to Streptomyces coelicolor probable t TrmU FT or SCO5488 or SC2A11.22 SWALL:TRMU_STRCO (SWALL:O86583) FT (376 aa) fasta scores: E(): 6.8e-81, 57.45% id in 362 aa" FT /db_xref="GOA:Q83HX5" FT /db_xref="InterPro:IPR004506" FT /db_xref="InterPro:IPR018318" FT /db_xref="UniProtKB/Swiss-Prot:Q83HX5" FT /protein_id="CAD67025.1" FT /translation="MKVLAAMSGGVDSAVAAARAVDMGHDVVGVHLALSRSASGKRGCC FT TPRDAQDAAQAAQTIGIPFYVWDFSEEFQEKVIDNFISEYSAGRTPNPCLRCNEHIKFS FT SLLRRALALGFDAVCTGHYARVFLDEDGTYQLHRASSWAKDQSYVLAVLQQAQLKHCYF FT PLGATPSKKLVRQEADERGLKVSKKPDSHDVCFIPSSNTGAWLSQRIGRRDGDIIDDLG FT QRVGSHTGAFAYTVGQRKGLRLSSPAWDGKPRYVLDIEPISNTVVVGPRESLRVDELSG FT AFTTTGWCFTSRPIECSVQVRAHSDPVSAIAFIRDDVLVVRPDEPVFAVAKGQSAAIYR FT GTRVLGQLMIDNTKKYASS" FT misc_feature 61916..62963 FT /note="tRNA methyl transferase Score = 490.6 E-value = FT 8.4e-145" FT CDS 62982..64868 FT /transl_table=11 FT /gene="ligA" FT /locus_tag="TW354" FT /product="DNA ligase" FT /EC_number="6.5.1.2" FT /note="Similar to Rhodothermus marinus DNA ligase LigA or FT Lig SWALL:DNLJ_RHOMR (SWALL:P49421) (712 aa) fasta scores: FT E(): 2.1e-36, 35.52% id in 625 aa" FT /db_xref="GOA:Q83HX4" FT /db_xref="HSSP:1V9P" FT /db_xref="InterPro:IPR001679" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR004149" FT /db_xref="InterPro:IPR004150" FT /db_xref="InterPro:IPR010994" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013839" FT /db_xref="InterPro:IPR013840" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018239" FT /db_xref="UniProtKB/Swiss-Prot:Q83HX4" FT /protein_id="CAD67026.1" FT /translation="MPHPDGDLDRRIELLTAQIIAARKAYYQENTSLMSDVEYDALEHE FT LKDAEHAKGFSDRNSPSLTVGIAAQLNLFEPVKHIEPMLSLDNVFSLDQLHSWYEKTKK FT ICPEGDQCTFVCELKIDGVGVSLRYANGYLISAATRGDGAIGEDITQNMLYVPSIPPRI FT ALPGIFEIRGEAFIKRDEFDRINQLSLERSKQFANPRNFVSGCIRTKTPNMRYLESISF FT YAHGFTQVYGYTSGGMNLHSDITASGGVKTEIEHGMFSAYSRLSECKIPVNSYNRLCTN FT FSEIESYIENIRLNRQCVPYAIDGIVVKIDSLQKQALLGSTTKAPRWAVAYKFPSESTV FT TRLLDIEVSVGRTGRVTPYAVLQPIQLDGSEVSRATLHNQKVIGDKDLLIGDYVRIRKA FT GDIVPEVLCALPEKRDGSEVLFKMPSLCPSCGAELMPSKLGDIDLRCPNMQSCLVQLAG FT RLEYIGSRGVLDIAYLAEENAYALSHLRKFGKSAEVQLFKITIDDLVALEFMYKGNMRS FT PFRKKGDSFPGFEEPTKSAQDMVDSIERAKRSPLWKFLLALNIRHIGPASAKALADHFG FT SIESIINAKIDELLKVRSLGETIAISVHDWFRDPWRVELVNTWRSDGALFGD" FT misc_feature 62997..63990 FT /note="NAD-dependent DNA ligase adenylation domain Score = FT 285.4 E-value = 5e-83" FT misc_feature 63996..64242 FT /note="NAD-dependent DNA ligase OB-fold domain Score = FT 143.6 E-value = 2.4e-40" FT misc_feature 64254..64341 FT /note="NAD-dependent DNA ligase C4 zinc finger domain Score FT = 28.3 E-value = 1.3e-05" FT CDS 65007..65309 FT /transl_table=11 FT /gene="gatC" FT /locus_tag="TW355" FT /product="glutamyl-tRNA(gln) amidotransferase subunit C" FT /EC_number="6.3.5.-" FT /note="Similar to Bacillus subtilis glutamyl-tRNA(gln) FT amidotransferase subunit C GatC SWALL:GATC_BACSU FT (SWALL:O06492) (96 aa) fasta scores: E(): 0.43, 28.86% id FT in 97 aa" FT /db_xref="GOA:Q83HX3" FT /db_xref="UniProtKB/TrEMBL:Q83HX3" FT /protein_id="CAD67027.1" FT /translation="MSISVDQVKSLARLACIDVTDSEADVLSRELSQIIDRLGFVKNGI FT SDKSITGDVSEPLSKNTGCFRHDTPGPVLDIAPVLSNGEDGMFRISAISGEDSAF" FT CDS 65299..66780 FT /transl_table=11 FT /gene="gatA" FT /locus_tag="TW356" FT /product="glutamyl-tRNA (gln) amidotransferase subunit A" FT /EC_number="6.3.5.-" FT /note="Similar to Bacillus subtilis glutamyl-tRNA (gln) FT amidotransferase subunit A GatA SWALL:GATA_BACSU FT (SWALL:O06491) (485 aa) fasta scores: E(): 3.1e-69, 44.44% FT id in 477 aa" FT /db_xref="GOA:Q83HX2" FT /db_xref="InterPro:IPR000120" FT /db_xref="InterPro:IPR004412" FT /db_xref="InterPro:IPR020556" FT /db_xref="UniProtKB/Swiss-Prot:Q83HX2" FT /protein_id="CAD67028.1" FT /translation="MLSEMPAHRLAALIRSKEVSALEVAESFIDNIEASDSRICAFLYT FT DFSYTRDVARRVDEELKSATKLSPLAGVPIAVKDMILTRDMPTTAGSKILEGWIPPYNA FT TVIERISRARMPILGKTNQDEFGMGSSTEYSAYKTTRNPWDLSRTAGGSGGGSSAAVSA FT SQAPLALGTDTGGSIRLPAHCTGTVGIRPTYGSVSRYGVIALASSFDQVGPCSSNILDA FT ALLHEVIAGYDPADAVSIKDQDLNFSQAAYEGANRGISGVRLGFVNPSNWCNSKITDLF FT GRTLKSLESEGAVLHEVQFPNFDHAVQAYYLIMQAEASSNLSRYDSIRFGPQEMAASAS FT GTVSKTRSIRFGPEVKRRILLGTHILSAGYYDDFYMSAQKIRSLVKRDFAKIFSLVDVL FT LLPTAPTPAFKLGEKIDHHTSMYKSDTATTPASLAGLPAGSIPMGVIDGLPVGLQIIAP FT GQFDSRVYSTGAAIEQIIGDIHAMKNTKHNTGQTA" FT misc_feature 65365..66694 FT /note="Amidase Score = 549.4 E-value = 1.7e-162" FT CDS 66777..68291 FT /transl_table=11 FT /gene="gatB" FT /locus_tag="TW357" FT /product="glutamyl-tRNA (gln) amidotransferase subunit B" FT /EC_number="6.3.5.-" FT /note="Similar to Streptomyces coelicolor glutamyl-tRNA FT (gln) amidotransferase subunit B GatB or SCO5501 or FT SC8D9.13 SWALL:GATB_STRCO (SWALL:Q9Z578) (504 aa) fasta FT scores: E(): 4.3e-90, 47.02% id in 504 aa" FT /db_xref="GOA:Q83HX1" FT /db_xref="InterPro:IPR003789" FT /db_xref="InterPro:IPR004413" FT /db_xref="InterPro:IPR006075" FT /db_xref="InterPro:IPR006107" FT /db_xref="InterPro:IPR017958" FT /db_xref="InterPro:IPR017959" FT /db_xref="InterPro:IPR018027" FT /db_xref="UniProtKB/Swiss-Prot:Q83HX1" FT /protein_id="CAD67029.1" FT /translation="MSEIVTYEDALKDFEPIIGLEVHVELSTQTKLFSSAPNIAGPLAS FT CASQGPNTLVTPVCLGLPGSLPTVNERAVDYGIALGLALGCSIADELIFARKNYFYPDL FT PKNYQISQFDSPLAYDGKLEVETESGDVFFVEIERAHLEEDAGKLAHKSSTGRIQGAQY FT SLIDYNRSGVPLVEIVSRPVFADRCAPQVARAFVELIREIVLSLGVSNARLERGNIRCD FT ANVSLRPRGLGAGILPNRTETKNLNSLRSIERAIRYEIQRQATLISSGELVRQETRHWR FT EDRGITLSGRVKADSHEYRYFPEPDLLPIPIPSDKVEAIRLSMPEHPLALRRRLKAEWK FT FSDLQFRDVLNSSVLKQVDETVRAGATPDGAKKWWTGEITRIASQRRCNASDLISPEAV FT AEIELLISKGILNDSLARKVLAAVIDESLSVQQAIEKYDLSLTESASVERVLEKVLSEN FT QEVVQKVISGKTQAVGVLVGSCMKTLGGKADASKLRQTILNRLLPR" FT misc_feature 66810..67584 FT /note="PET112 family, N terminal region Score = 431.1 FT E-value = 7.1e-127" FT misc_feature 67275..67322 FT /note="PS01234 PET112 family signature." FT misc_feature 67635..67839 FT /note="PET112 family, C terminal region Score = 52.0 FT E-value = 9.3e-13" FT misc_feature 67842..68277 FT /note="GatB/Yqey domain Score = 83.8 E-value = 2.4e-22" FT CDS complement(68340..69296) FT /transl_table=11 FT /locus_tag="TW358" FT /product="putative membrane protein" FT /note="Weakly similar to Streptomyces coelicolor putative FT membrane protein SCO7017 or SC1H10.06c SWALL:Q9L038 FT (EMBL:AL352956) (301 aa) fasta scores: E(): 0.034, 23.64% FT id in 313 aa" FT /db_xref="InterPro:IPR005135" FT /db_xref="UniProtKB/TrEMBL:Q83NM2" FT /protein_id="CAD67030.1" FT /translation="MIKKIFLICFFVSCSALFFISDTLPEQVRYISQDFLPWLIVPILI FT FLVPSLIRFSLIPSLVGTITVIFWATQIGISALPSGESQVPDLTIVTQDMNSEASVSEA FT QTTHRSRNNSPPDNINRDVKTLLESNPDIIALQGIKNAAIGTLVGSLSPSFPFWHIFGT FT VGIWSKKPLENAVMLQLGSKLTSAGKIDIKISKEQTVRMYVVSLRKNQLDRLAQDEYEG FT MIKDLSVYLSQENSEKLIVVGGFGMSARDSRFKKLLKNNLKDMHTASWGFDFTWPSVFP FT LIDLDHILSTGFTATGGKLIHLEGSDHKGILMGLKHT" FT misc_feature complement(order(69126..69194,69237..69284)) FT /note="2 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 5-20 and 35-57" FT misc_feature complement(69207..69296) FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.993) with cleavage FT site probability 0.381 between residues 30 and 31" FT CDS 69620..70174 FT /transl_table=11 FT /locus_tag="TW360" FT /product="putative integral membrane protein" FT /note="Similar to Corynebacterium glutamicum ABC-type FT transporter, permease components cgl1078 SWALL:BAB98471 FT (EMBL:AP005277) (196 aa) fasta scores: E(): 4.9e-17, 37.12% FT id in 167 aa" FT /db_xref="InterPro:IPR017195" FT /db_xref="UniProtKB/TrEMBL:Q83NM1" FT /protein_id="CAD67031.1" FT /translation="MIRRVVDIVYATVLSVVYALILLSLNYAYGLLSLLFSILPGISGV FT LTGLFVLGGPLGGIIVRKPGAAVFVSTLGALIESTLGVQWGWLNLLYGFAQGLAAETIF FT LICCYRIYTPFIAILSGLSAVSSGLFVEIILAALLEHTSLYIVIYVSTSLISGAAIGIF FT SWKIYLALKKSGALDPLDTFK" FT misc_feature order(69665..69733,69743..69802,69815..69883,69893..69946, FT 69965..70033,70046..70114) FT /note="6 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 3-25, 29-48, 53-75, 79-96, FT 103-125 and 130-152" FT CDS 70242..71789 FT /transl_table=11 FT /locus_tag="TW361" FT /product="putative ABC transporter ATP-binding subunit" FT /note="Similar to Staphylococcus aureus Mw0959 protein FT SWALL:BAB94824 (EMBL:AP004825) (466 aa) fasta scores: E(): FT 1.1e-17, 29.5% id in 505 aa, and to Escherichia coli FT taurine transport ATP-binding protein TauB or SsiB or b0366 FT SWALL:TAUB_ECOLI (SWALL:Q47538) (255 aa) fasta scores: E(): FT 2e-10, 30.73% id in 218 aa" FT /db_xref="GOA:Q83HX0" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q83HX0" FT /protein_id="CAD67032.1" FT /translation="MSNPNIVATQSAIREDVEISNWSFSHSGDTIINNLSLSIRQGERV FT LIIGPSGCGKSTLLLALAGLVHGFRGSILIGGEQPAPDQTAFVMQDPDSQVIFPNIGDE FT VAFPLELTMPNRRDIWEAVSMGLKSVGLSLPTTTQSDKLSHGQKQCLSIACTFASCPKI FT LLLDEPLASLDKNSTEQVLKCFDSLFDVMGSSFAYTTFITGHDVEPWINRVDRVVVFNS FT KGSLSYDLPVGAIKNNKAILQKAGVFYKHRTLGNRSGPRTLHDSNRPVIMEVTNLAVTR FT GKNNLFENVTFQVHSGECIAIIGPNGVGKTSILLTVSGLMRAKRGDIFFECCMHDSRGR FT CQYSCGMNRDILTHTSPCGSFRNMHPPARCIKKPRHMARNLRKHTAIVMQNPEHQFLAS FT SVDRELALGKGNCFGNDDLLERLNLLDAKSLNPFTLSWGQKRRLALAISVSMRPRILLL FT DEPLVGQDADISDQIVDFLIDLKLKGLGILIATHSKPLIDALADRVMELKAGEIAWK" FT misc_feature 70365..70908 FT /note="ABC transporter Score = 111.0 E-value = 1.6e-30" FT misc_feature 70386..70409 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 70668..70712 FT /note="PS00211 ABC transporters family signature." FT misc_feature 71130..71769 FT /note="ABC transporter Score = 113.0 E-value = 4e-31" FT misc_feature 71151..71174 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 71780..72508 FT /transl_table=11 FT /locus_tag="TW362" FT /product="putative ABC transporter integral membrane FT subunit" FT /note="Similar to Corynebacterium glutamicum ABC-type FT transporter, permease components cgl1080 SWALL:BAB98473 FT (EMBL:AP005277) (251 aa) fasta scores: E(): 1.9e-14, 28.8% FT id in 243 aa" FT /db_xref="GOA:Q83NM0" FT /db_xref="InterPro:IPR003339" FT /db_xref="UniProtKB/TrEMBL:Q83NM0" FT /protein_id="CAD67033.1" FT /translation="MEIRLPYISSIYVNPLTRLLAGISVTVFLLLSLNPYRSAICAILL FT LVLSGLDKQCLYFLLSVTLVSGLTFISALLYAKPTGLTYAKFSVFDATIVQITDGSLYL FT STSLFARMIAFGVISLLVFYRINFTALADGFVQLLRVPRKLVFSTLSGLRTCLLIGRDC FT RNIRYMCALRGVSFFSRGVMPLFVSAMRRAYWLSIVLKLRGIEALAKTHARSAHLGVND FT LMFFCACIAIMVVSHSVSVG" FT misc_feature order(71822..71881,71942..72010,72083..72151,72431..72499) FT /note="4 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 15-34, 55-77, 102-124 and FT 218-240" FT tRNA complement(72563..72635) FT /note="tRNA Arg anticodon TCT, Cove score 75.85" FT CDS complement(72636..72851) FT /transl_table=11 FT /locus_tag="TW363" FT /product="putative integral membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCO4848 or SC5G8.16 SWALL:Q9KZ98 FT (EMBL:AL353872) (79 aa) fasta scores: E(): 1.2, 31.74% id FT in 63 aa" FT /db_xref="UniProtKB/TrEMBL:Q83NL9" FT /protein_id="CAD67034.1" FT /translation="MGYLLPSILMVNAAWNVLVWPQFMIRVKKDKRSRDDLGKVTRFFV FT VHVLLVSVSLVIAFVSFVTALAAILS" FT misc_feature complement(order(72642..72710,72771..72839)) FT /note="2 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 5-27 and 48-70" FT CDS 72883..73437 FT /transl_table=11 FT /gene="orn" FT /locus_tag="TW364" FT /product="oligoribonuclease" FT /EC_number="3.1.-.-" FT /note="Similar to Streptomyces coelicolor oligoribonuclease FT Orn or OrnA or SCO2793 or 2SCC13.01 SWALL:ORN_STRCO FT (SWALL:P57666) (200 aa) fasta scores: E(): 8.3e-30, 51.76% FT id in 170 aa" FT /db_xref="GOA:Q83HW9" FT /db_xref="InterPro:IPR006055" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR013520" FT /db_xref="UniProtKB/Swiss-Prot:Q83HW9" FT /protein_id="CAD67035.1" FT /translation="MCVAPTPSHLVWVDCEMTGLNPERDELLEVAVIVTDKDLLPLDEG FT VNVVVSPSSEALGAMDNYVARMHRVSGLLDELSNGVPVSEAQAMVKEYITKHIKTGGIM FT SGNSIATDRLFITRYMPDVHAILHYRMIDVSSIKELAVRWAPEIYSGAPNKKGGHRAMA FT DVLESIAELAYYREHFLTGTA" FT misc_feature 72910..73420 FT /note="Exonuclease Score = 87.7 E-value = 1.6e-23" FT tRNA 73480..73552 FT /note="tRNA His anticodon GTG, Cove score 79.87" FT CDS 73571..74386 FT /transl_table=11 FT /gene="nadE" FT /locus_tag="TW365" FT /product="NH(3)-dependent NAD(+) synthetase" FT /EC_number="6.3.5.1" FT /note="Similar to Bacillus subtilis NH(3)-dependent NAD(+) FT synthetase NadE or OutB SWALL:NADE_BACSU (SWALL:P08164) FT (271 aa) fasta scores: E(): 1.1e-55, 55.26% id in 266 aa" FT /db_xref="GOA:Q83HW8" FT /db_xref="InterPro:IPR003694" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q83HW8" FT /protein_id="CAD67036.1" FT /translation="MCCDISKTLCVKPFIDPEEEISHRVSFLADYLRHSRASGYVLGIS FT GGQDSALAGRLCQIAVESVRSIGFDATLWAIRLPYGQQFDESDAQTAMQFISPDEELSF FT DIRSATDNLCVDLNRSLGSKISDFNRGNIKARLRMVVQYAVAAHHDALVVGTDHAAEAV FT TGFFTKFGDGAADILPLYGLTKGQGRALLKALGACDSIIEKVPTADLLDDLPCLPDETE FT LGLQYRDIDAFLEGKPVSEDITMAITERYKSTLHKRMPPITPHSTWWRK" FT misc_feature 73802..74363 FT /note="NAD synthase Score = 170.5 E-value = 2e-48" FT CDS complement(74438..75064) FT /transl_table=11 FT /locus_tag="TW366" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q83NL8" FT /protein_id="CAD67037.1" FT /translation="MSAGVIVSVFIASCITRSSVKKLLKRDAILARKHAAECLIDTFLE FT FRNQYSLEENKRNSDQTFERCTMHIALMPQYGAKLLVDWAGQIAGEVRRATLNGDTDAI FT TYEFRDRVALWVKNPRKATKGIREDISRFRSENPSYRPLTGKVNTNDEENWHPQEPITD FT LAGADTVKAGQDNNVASEPYRMRPGFDTAARDILRQVKDIQAGGK" FT misc_feature complement(75014..75064) FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 15-37" FT CDS 75273..75719 FT /transl_table=11 FT /gene="ssb2" FT /locus_tag="TW367" FT /product="single-strand DNA binding protein" FT /note="Similar to Streptomyces coelicolor putative FT single-strand DNA binding protein SCO2683 or SCC61A.04c FT SWALL:Q9KYI9 (EMBL:AL356595) (156 aa) fasta scores: E(): FT 2.4e-10, 41.07% id in 112 aa, and to Mycobacterium FT tuberculosis single-strand binding protein Ssb or rv0054 or FT mt0060 or mtcy21d4.17 SWALL:SSB_MYCTU (SWALL:P71711) (164 FT aa) fasta scores: E(): 1.6e-07, 30.08% id in 113 aa" FT /db_xref="GOA:P66857" FT /db_xref="InterPro:IPR000424" FT /db_xref="InterPro:IPR011344" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/Swiss-Prot:P66857" FT /protein_id="CAD67038.1" FT /translation="MRGKRMNHITVSGLVATEPRSFLTAEGVHITSFRLAAQDRHFSRN FT ANSWVSGDTNWFTVTGFRALGSNAAESISKGDRVIVYGRLRLRTWGDNKMAVEIEAESF FT GHDLRWGTSVFSKRFYQLPEASDNLRTKYDVDEAETPEIHAKAA" FT misc_feature 75288..75606 FT /note="Single-strand binding protein family Score = 20.5 FT E-value = 2.7e-06" FT CDS 75868..76374 FT /transl_table=11 FT /locus_tag="TW368" FT /product="putative secreted protein" FT /note="No significant database matches. Note possible FT alternative downstream start codons" FT /db_xref="UniProtKB/TrEMBL:Q83NL6" FT /protein_id="CAD67039.1" FT /translation="MSCRERVRSMRSVFHGLIFRKVYFLVVSMICFGVFAGCLNSESGS FT RDSGSQLHTPARANLALSAAKNKDAFDQAIKSIFVLHKKDELPSPIELAASLVRAGFSK FT KSIQVTNNRTTLGAYAYSMSVSVFLHNSCLVGQFIRSTGEYSSSILDPVGTTQLCLVGK FT TVDIE" FT misc_feature 75895..76005 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.973) with cleavage FT site probability 0.654 between residues 50 and 51" FT misc_feature 75916..75984 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 21-43" FT CDS 76381..78051 FT /transl_table=11 FT /locus_tag="TW369" FT /product="putative ABC transporter ATP-binding protein" FT /note="Strongly conserved. Similar to Streptomyces FT coelicolor putative ABC transpoter ATP-binding protein FT SCO2677 or SC6D10.20c SWALL:Q9L244 (EMBL:AL138538) (547 aa) FT fasta scores: E(): 2.2e-112, 66.23% id in 545 aa, and to FT Escherichia coli O157:H7 ABC transporter ATP-binding FT protein YjjK or b4391 or z5993 or ecs5349 SWALL:YJJK_ECOLI FT (SWALL:P37797) (554 aa) fasta scores: E(): 5.3e-84, 50.82% FT id in 547 aa" FT /db_xref="GOA:Q83HW7" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q83HW7" FT /protein_id="CAD67040.1" FT /translation="MSEYIYSMVRARKKVGDRLILDDVTMAFLPGAKIGMVGPNGAGKS FT TILRIMAGLDSPSNGEALLSPGYTVGILLQDPELDDSATVLENVQMGLGPIRHDLDRFN FT QISALLTDPSEDYDALLTEMGTLQERIDTAKAWDIDSRLSQAMHALRCPEPDQKAAHLS FT GGERRRVALCALLLTAPDLLLLDEPTNHLDAESVLWLEQHLARYQGAVIAVTHDRYFLD FT NVAQWIAEVDRGHLYPYEGNYTTYLEKKRDRLKIQGKKDEKLARRLNNEIEWVRSSPKG FT RQAKSRARLVRYETMLESAQKTGKTNFDEIQIPPGPRLGDKVLEVEDLTKLFGSRVVIN FT RLTFSLPRNGVIGVVGPNGVGKTTLFRILAGEEKDYSGRVSFGDSVVVSYVDQTRSGID FT PTRNVWQIVSNGLDYMEVGKVEIPTRAYISRFGFKGSDQQKLAKVLSGGELNRLNLALT FT LKQGGNLLLLDEPTNDLDVETLSSLESALDAFPGCAFVITHDRYFLDRVSTHILAYEGT FT PEYPGEWRWFEGNFQGYIDDRLSRLGPDSAGVHRQLVRD" FT misc_feature 76471..77080 FT /note="ABC transporter Score = 175.2 E-value = 7.6e-50" FT misc_feature 76492..76515 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 76864..76908 FT /note="PS00211 ABC transporters family signature." FT misc_feature 77425..77929 FT /note="ABC transporter Score = 121.8 E-value = 9.2e-34" FT misc_feature 77446..77469 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 77713..77757 FT /note="PS00211 ABC transporters family signature." FT CDS 78051..78527 FT /transl_table=11 FT /locus_tag="TW370" FT /product="hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO2676 or SC6D10.19c SWALL:Q9L245 (EMBL:AL138538) FT (136 aa) fasta scores: E(): 3.1e-05, 34.64% id in 153 aa" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q83HW6" FT /protein_id="CAD67041.1" FT /translation="MLVLVPVRWGDQDPYGHVNNAQMLRILEEARMRGIWGPSGAVTFD FT PGASDGRSDGQNRQDDMTVPRSINSNTMTVVARHEIDYLRPTMYQLEPLQVEMKITRLG FT GASIDMYYEVWPDDDRVGRPLVRAVSVFVLVSTKTGRSRRMSNSEREYFRRYMD" FT CDS complement(78731..81247) FT /transl_table=11 FT /gene="pepN" FT /locus_tag="TW371" FT /product="aminopeptidase N" FT /EC_number="3.4.11.2" FT /note="Similar to Streptomyces lividans aminopeptidase N FT PepN SWALL:AMPN_STRLI (SWALL:Q11010) (857 aa) fasta scores: FT E(): 8.4e-69, 39.86% id in 858 aa" FT /db_xref="GOA:Q83HW5" FT /db_xref="InterPro:IPR001930" FT /db_xref="InterPro:IPR012778" FT /db_xref="InterPro:IPR014782" FT /db_xref="UniProtKB/TrEMBL:Q83HW5" FT /protein_id="CAD67042.1" FT /translation="MIMKDITRTEAAERASVIQDCHYEIFLDLTKRERFFSRTCVKFNS FT KPGANTFIDALANAIESVSLNGIPLDVKSVFDGSRIALENLETDNEVVVEGYFEYTNTG FT EGMHEFTDPVDNETYLYTQCEVSDARRIFAVFEQPDIKASFIVSTKVPKNWHVISNSTC FT REMKDESNNTTLGTTENCPRVWNFGQTPKMSSYLFAIAAGPYVGTQSVYKGARSIPLGI FT YCRKSMNQYLDADYIFDITRSGFEYYEKRFSHPFPFEKYDQVFLPEYNMGAMENIGCVT FT LSENYIFRGRADRALKERRVVTILHELAHMWFGNLVTMRWWNDLWLNESFAEIVSTMAS FT ERVTEYKDAWATFALIEKSWAYVEDQLPTTHPVVADVNRLSDVYSNFDGITYAKGASVL FT KQLVHWIGEEKFYEGLNRYFRKYAYGNATLKDLLTELSSASGQALDEWSKQWLETPGVN FT TINAKFCVKDGKLDSFSLEQDGPQRSHRINIGLYNLESDVLKKTIQTSVLISGAKTAVR FT ELVGIKQPDLILLNDKDYGYCKVRFDIQSMDCILENLSKLKDPLSRSIIWCNLWLNVRD FT CLIDPSLFVETFVRHVESEQDTKWILERVNKCINFYTKDDKSTKASIAEKVWLMFERAQ FT PNSDNQLQFLKGYALFCSTKMQYERLLAILTGKCNVVQLDADLEWHIIAALAAGDYIDE FT DEINNFEKKDNTITGRELSARARAALPNKKADCWQKILTDRTLSNSTIRSISVGFQFVQ FT SADQLSPFVDVYFDNVLDIFKNRTFAIASAISEGMFPLRLSNTDLVQKTKSWLRDNKDA FT PVGLRRIVTDNLHEAEIAVKLKECFS" FT misc_feature complement(80065..81208) FT /note="Peptidase family M1 Score = 279.5 E-value = 3e-81" FT misc_feature complement(80312..80341) FT /note="PS00142 Neutral zinc metallopeptidases, zinc-binding FT region signature." FT CDS 81395..82006 FT /transl_table=11 FT /locus_tag="TW372" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv2466c or mtv008.22C SWALL:O53193 (EMBL:AL021246) FT (207 aa) fasta scores: E(): 1e-25, 41.91% id in 198 aa" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:Q83HW4" FT /protein_id="CAD67043.1" FT /translation="MLVCVSSSPVRVWLDPFCPWAWLVANWLEEVSLHRKIDVDQRTMS FT LALLPGNSARRNEPFMEASLEATLVLTAVAQELGSGASKRLYMSLGKKIHKEEFNLGNT FT ATLITDSLSDTGLPEDFSRRSSEYYNQLQESTSAALSLVGDQCGTPVVSVGDVAFFGPV FT ISRVPRGEDAVRFFDSIVSVCSWSGFYELKRTRSEGPQID" FT CDS 82008..82475 FT /transl_table=11 FT /gene="rpiB" FT /locus_tag="TW373" FT /product="ribose 5-phosphate isomerase B" FT /EC_number="5.3.1.6" FT /note="Similar to Escherichia coli ribose 5-phosphate FT isomerase B RpiB or b4090 SWALL:RPIB_ECOLI (SWALL:P37351) FT (149 aa) fasta scores: E(): 1e-09, 32.21% id in 149 aa, and FT to Streptomyces coelicolor putative isomerase SCO2627 or FT SC8E4.02c SWALL:Q9L206 (EMBL:AL138661) (159 aa) fasta FT scores: E(): 1.8e-28, 57.43% id in 148 aa" FT /db_xref="GOA:Q83HW3" FT /db_xref="HSSP:1O1X" FT /db_xref="InterPro:IPR003500" FT /db_xref="InterPro:IPR011860" FT /db_xref="UniProtKB/TrEMBL:Q83HW3" FT /protein_id="CAD67044.1" FT /translation="MSGRVHLATDHAGYEFSKGLLNFLADEHYQVVHHGAVNCDPEDDY FT PSFCIAAAEAVVRDITDGIPSLGVVIGGSGNGEQIAANKVKGARAALAWNECTARLARA FT HNNANVVAIGARMHAHDEGFRIVLAFLREPFSEDSRHIRRIDAISSYECQS" FT misc_feature 82209..82452 FT /note="Ribose/Galactose Isomerase Score = 127.6 E-value = FT 1.6e-35" FT CDS 82503..83387 FT /transl_table=11 FT /gene="nei" FT /locus_tag="TW374" FT /product="endonuclease VIII" FT /EC_number="3.2.-.-" FT /note="Similar to Escherichia coli endonuclease VIII Nei or FT b0714 SWALL:END8_ECOLI (SWALL:P50465) (262 aa) fasta FT scores: E(): 6.4e-06, 24.34% id in 304 aa, and to FT Streptomyces coelicolor putative DNA repair hydrolase FT SCC80.11c or SCO2626 SWALL:Q9F308 (EMBL:AL442143) (306 aa) FT fasta scores: E(): 7.3e-12, 31.26% id in 323 aa" FT /db_xref="GOA:Q83HW2" FT /db_xref="InterPro:IPR000214" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR012319" FT /db_xref="InterPro:IPR015886" FT /db_xref="UniProtKB/TrEMBL:Q83HW2" FT /protein_id="CAD67045.1" FT /translation="MPEGHSIHRSAIQFEHNFVGKKIGISSPQGRFSPGARLLDKQKMI FT SAKAYGKQLLLGFENNRFLQVHLGIYGAWQFYGNISCAPTILPGAEGIQSIGAPRRLKG FT PCITKNSGSTPGASWKDLMFKHQAQARAKLITDTAGVLLSGPAVCKVLTPEEADELISR FT LGPDPVVNPMGYNRFIKAARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNPFLTS FT NTIPEDTLKRIWDDWTVLLKCGIKTGQMITMNKAPGHWVYNHHKSPCSVCFHPIDCVNV FT AGRKLYWCVVCQA" FT misc_feature 82503..83379 FT /note="Formamidopyrimidine-DNA glycosylase Score = 88.0 FT E-value = 1.3e-23" FT CDS complement(83389..83862) FT /transl_table=11 FT /locus_tag="TW375" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO5756 or SC7C7.11 SWALL:O86816 (EMBL:AL031031) FT (156 aa) fasta scores: E(): 3.8e-12, 37.68% id in 138 aa" FT /db_xref="GOA:Q83HW1" FT /db_xref="InterPro:IPR002177" FT /db_xref="InterPro:IPR008331" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:Q83HW1" FT /protein_id="CAD67046.1" FT /translation="MTTILREKNETALRVSQFLSPIVVNLTALSVDFKQLHWHVRGGNF FT IGLHRLLDEIIDHAREAADVLAERAVSVGVPVDGRIASVAAETSTPAVPEGFINSEQAV FT DIAVAQLDAVLLVIGEAIENPSLLDAASQDAVIEVARTLDKDRWFLLAHKTVE" FT misc_feature complement(83400..83820) FT /note="Ferritin-like domain Score = 20.1 E-value = 0.00014" FT misc_feature complement(83704..83754) FT /note="PS00818 Dps protein family signature 1." FT CDS complement(83992..85074) FT /transl_table=11 FT /locus_tag="TW376" FT /product="putative ribonuclease" FT /note="Similar to Corynebacterium glutamicum ribonuclease D FT cgl1901 SWALL:BAB99294 (EMBL:AP005280) (421 aa) fasta FT scores: E(): 2.8e-23, 33.97% id in 365 aa, and to FT Escherichia coli ribonuclease D Rnd or b1804 FT SWALL:RND_ECOLI (SWALL:P09155) (375 aa) fasta scores: E(): FT 0.003, 25.5% id in 247 aa" FT /db_xref="GOA:Q83NL5" FT /db_xref="InterPro:IPR002121" FT /db_xref="InterPro:IPR002562" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q83NL5" FT /protein_id="CAD67047.1" FT /translation="MRSGFGPFAIDTERANRFKYDQEFPWLVQLYRRPTGCFIFDTSKI FT DNLSKLGDLIGSEEVVIHAAINDIKSLKRVGIHITNLFDTEIACRLLNIPKVNLSYVTE FT KFINVKLRKEYSTVNWSARPLNKKYLEYAEGDVKHLLDLSQALKTALRAENKLEIAKEE FT FSHVFMVVKHQSEIDKLDKFCHGLEDDMQRAVAKNLWKARDEIARSKDIFTPRILSNKA FT IRILAKQVPENLEILKTLLKKDKRPFRKQYINLWHNAISRARVQCRNSESQIQRKVITS FT EKQYPKERMDLAKAISQSCAEKINVPLENLITTHTLKSVIATDISSLCEMGGVLRKIGL FT RDWQIKALQQPLFDGLYGKE" FT misc_feature complement(84258..84510) FT /note="HRDC domain Score = 26.1 E-value = 1.9e-05" FT misc_feature complement(84621..85074) FT /note="3'-5' exonuclease Score = 69.7 E-value = 4.4e-18" FT CDS complement(85148..85699) FT /transl_table=11 FT /locus_tag="TW377" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO6030 or SC1C3.18c SWALL:O69860 (EMBL:AL023702) FT (238 aa) fasta scores: E(): 7.3e-15, 34.1% id in 173 aa" FT /db_xref="UniProtKB/TrEMBL:Q83HW0" FT /protein_id="CAD67048.1" FT /translation="MVVSFCMSYDFQKIERELRTATYRSGMHVWEISPSPAKATHSIAF FT GANVSEETEGKILASGNFVVLNEDQYMERWQGKIRFICFLQAPLENDMGHDPFLEEIAW FT QWTTDALDSAGARYKSLSGVVSRCTARYFGDIRDMGSKSGIELRVSWTPVTTDILPHAH FT AFSSALENLAGLMPIEKLSL" FT CDS complement(85719..86414) FT /transl_table=11 FT /locus_tag="TW378" FT /product="conserved hypothetical protein" FT /note="Weakly similar to Sulfolobus tokodaii hypothetical FT protein St0285 SWALL:Q975Z3 (EMBL:AP000982) (213 aa) fasta FT scores: E(): 0.001, 29.19% id in 161 aa" FT /db_xref="UniProtKB/TrEMBL:Q83HV9" FT /protein_id="CAD67049.1" FT /translation="MSKAIQDFISEKYKFPKDDWICANYIQSFSGNLNSDNCTSDTLSN FT PRDRMILHTIREANDAVFVGARTARVENISVKNKPLIVLTNSGNLGGISANRNTIVIAP FT KTTETQIRHTIGASVNVIWLDNFGDITRYSQTMGVLIAKAVKSLGFKRIVCEGGLTLIR FT MLLSAGAIDELCISIVDKNSTGPRIDTDTLCTPKLTQVLVDQEFYKKQRIKSVYTRWVL FT QNRRGRDEE" FT misc_feature complement(85799..86357) FT /note="RibD C-terminal domain Score = -30.5 E-value = FT 4.5e-06" FT CDS complement(86411..86809) FT /transl_table=11 FT /locus_tag="TW379" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv3284 or mt3383 or mtcy71.24 SWALL:YW84_MYCTU FT (SWALL:P96889) (143 aa) fasta scores: E(): 7.6e-19, 45.86% FT id in 133 aa" FT /db_xref="InterPro:IPR003808" FT /db_xref="UniProtKB/TrEMBL:Q83HV8" FT /protein_id="CAD67050.1" FT /translation="MTSALEKIRDDFIAIPEGERLNLLLYFSDSLPPLPDHASSLVNRE FT VPECQSPLSFLLEVKENRVYIWAYAPKEAPTTRGFASIVVQGIYGETVENALGVPSDFP FT LTLGLTRLVSPLRLRGMSAFIARVKAML" FT misc_feature complement(86416..86788) FT /note="Domain of unknown function DUF Score = 60.8 E-value FT = 2.1e-15" FT CDS complement(86908..87816) FT /transl_table=11 FT /locus_tag="TW380" FT /product="putative thiosulfate sulfurtransferase" FT /note="Similar to Mycobacterium tuberculosis putative FT thiosulfate sulfurtransferase SseA or Rv3283 or mt3382 or FT mtcy71.23 SWALL:THT2_MYCTU (SWALL:P96888) (297 aa) fasta FT scores: E(): 2.1e-65, 56.33% id in 284 aa, and to FT Saccharopolyspora erythraea putative thiosulfate FT sulfurtransferase CysA SWALL:THTR_SACER (SWALL:P16385) (281 FT aa) fasta scores: E(): 3.2e-54, 51.67% id in 269 aa" FT /db_xref="GOA:Q83HV7" FT /db_xref="HSSP:1URH" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:Q83HV7" FT /protein_id="CAD67051.1" FT /translation="MTRCLSWTGGFVKEFLSDAEKISSYADPNRLVTTDWLAKNLDRVT FT VIESDEDVLLYESGHIPGSIKVDWHTDLNDTVLRDYLSPEKFRDMCVSKGISDNDIIVF FT YGDKSNWWAAYAAWVFCLYGNDNWKLLDGGRDKWISEGRPMTKEVANRPRGTYALPVRN FT DDEIRAYRDDVAKHIGKQMIDVRSTREYTGELTHMPEYPQEGALRGGHVPSAVSIPWSS FT AVGSDGTFLPREKLEEIYFGQTGHSADKDTIVYCRIGERSSHTWFVMKYLLGVKHIRNY FT DGSWTEWGNLVRAPIVTGPNP" FT misc_feature complement(86946..87309) FT /note="Rhodanese-like domain Score = 82.2 E-value = FT 7.5e-22" FT misc_feature complement(87396..87720) FT /note="Rhodanese-like domain Score = 72.4 E-value = FT 6.6e-19" FT tRNA complement(88019..88090) FT /note="tRNA Val anticodon CAC, Cove score 84.28" FT tRNA complement(88138..88209) FT /note="tRNA Val anticodon GAC, Cove score 84.77" FT tRNA complement(88225..88295) FT /note="tRNA Cys anticodon GCA, Cove score 64.78" FT tRNA complement(88340..88411) FT /note="tRNA Gly anticodon GCC, Cove score 81.94" FT CDS complement(88536..89744) FT /transl_table=11 FT /locus_tag="TW381" FT /product="putative secreted protein" FT /note="Short C-terminal region similar to that of FT Streptomyces coelicolor hypothetical protein SCO2326 or FT SCC53.17 SWALL:Q9KXJ4 (EMBL:AL357591) (154 aa) fasta FT scores: E(): 1.6e-13, 51.54% id in 97 aa" FT /db_xref="UniProtKB/TrEMBL:Q83NL4" FT /protein_id="CAD67052.1" FT /translation="MRLHLSQSRFKKLCVCILVTSLAFFHTTYVVADESELPSWSEIEK FT AKTDIREKQKQIHAINLALNRLSQRLNEASDRVLKLSADYTVGENNLEIIDNSLSNLNL FT QRRNAQKSIVESSKQINRVITGMFQGSLIAFDLDAFKVPDGLLYGLTVMNRYTDNLSNF FT RNKMFASYNSFSYIQRQIEETRLLQKKLIVSVDAKRAEAVKSVEQLKLDMARKRDLSTR FT LLSMLASLKGTTLAKEKQLKQEEERAAIAKTEPARSTGINTKIIEIDSNTSKTGGRTRK FT NKNKKDDSNPLYLLAISGLPKREEAKRYAKKRVFDRGWNEKEWKCLEILWTRESTWRWN FT AYNLSSGAYGIPQALPGSKMANIADDWMTNQNTQIEWGLSYITSRYKTPCKAWEFWQKS FT NWY" FT misc_feature complement(89649..89708) FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 13-32" FT misc_feature complement(89649..89744) FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.995 between residues 32 and 33" FT CDS complement(89741..90856) FT /transl_table=11 FT /locus_tag="TW382" FT /product="putative integral membrane protein." FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCO0796 or SCF43.07 SWALL:Q9RD81 FT (EMBL:AL136502) (419 aa) fasta scores: E(): 6.6e-08, 22% id FT in 359 aa" FT /db_xref="UniProtKB/TrEMBL:Q83NL3" FT /protein_id="CAD67053.1" FT /translation="MRKNTKQLVLYGHKAVAAEERGSLIQPIKATCAIVIAWIASILIF FT PDSHPIVATITAFLAIQPSISQAFRFGAENTVGAILGTSVALILGIAFPGNYKLLIIAG FT GIVGITIGWILKFGYNAICQMVISTMFVAAIIPTNSGYAFVRVMESLLGAAVGFVVNLI FT IVPPIQIEPAYKKMRSLADITSSTMQGLSEALRVPDKVTDTRLFNRNIELMKHGIQSAD FT QAVEKAKESMLLNHKARKMRAKFDDDVLVLFRLERIAGHLIGMLHVYMDSFTPELSKDS FT AVKEISRQLNKAAHDTQLFKRQWKPNKSNRFMQKVIRNKVAVDTTPPTSAIPILTTPLR FT VTKPDPIHWVAIGSMLADLKRIHDLVTGRIR" FT misc_feature complement(order(90347..90406,90425..90493,90506..90559, FT 90578..90646,90689..90757)) FT /note="5 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 34-56, 71-93, 100-117, FT 122-144 and 151-170" FT CDS complement(90883..92610) FT /transl_table=11 FT /locus_tag="TW383" FT /product="putative membrane protein" FT /note="C-terminal region similar to Corynebacterium FT glutamicum hypothetical protein Cgl2257 SWALL:BAB99650 FT (EMBL:AP005281) (344 aa) fasta scores: E(): 5.7e-32, 38.72% FT id in 315 aa. N-terminal region similar to Escherichia coli FT DedA protein or b2317 or z3579 or ecs3201 SWALL:DEDA_ECOLI FT (SWALL:P09548) (219 aa) fasta scores: E(): 1.4e-09, 28.65% FT id in 178 aa" FT /db_xref="InterPro:IPR015414" FT /db_xref="InterPro:IPR019236" FT /db_xref="UniProtKB/TrEMBL:Q83NL2" FT /protein_id="CAD67054.1" FT /translation="MFDFVHTFLEVISSINPLLLIGIAFVAVVLETSILIGLVVPGDAV FT IIVASLGVKNFGEYLLLLIAVIFGSFVGETCGFLLGKFFGKSLRKIKFKNLKFDRANSL FT IQQHEWKALLISRFTPVLHSVVPVAAGIAGLKYKKFIFWTMISCTLWAVLYVTFGFLAV FT SNYRELSGKLHYAALIFFAILVGFVTLITVIKKFAKKYSDNKDSAIQNNSLHFAAIWEN FT RMHELLRKWARKRKRVEIINPVMGYGSEEWIRVLGRVLMVNPKSAKKNKDIRGWRSFFS FT IPVPGVLVKARICKCKNYAPTIGQSIGTQNASMDDSFCTCNPVEYFFRADRGGVIDAKV FT PVKLSPGMHTVYLATPRSGSFRCQIAIVSKRVKIGFVSDIDDTIVVTRLPRVLVAAWNT FT FVVNERARHPVSGMNVLFELLARANPGAPFIYLSTGAWNTAAALERFMTRNIYPQGPLL FT LTDWGPTHDRWFRNGNQHKRENIERLISEFPRIKWVLIGDSGQHDEGIYTEFALRYPKN FT VELILIRRLFAFEAFFIGRFLRRKQKKSTLKIVRYGYDGSDMLNEIRMLPKSNFTIRI" FT misc_feature complement(order(92029..92088,92125..92193,92206..92274, FT 92368..92436,92494..92562)) FT /note="5 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 17-39, 59-81, 113-135, FT 140-162 and 175-194" FT misc_feature complement(92070..92547) FT /note="DedA family Score = 53.6 E-value = 3e-13" FT CDS 92640..94070 FT /transl_table=11 FT /gene="trpE" FT /locus_tag="TW384" FT /product="anthranilate synthase component I" FT /EC_number="4.1.3.27" FT /note="Similar to Sulfolobus solfataricus anthranilate FT synthase component I TrpE or Sso0893 SWALL:TRPE_SULSO FT (SWALL:Q06128) (421 aa) fasta scores: E(): 5.8e-35, 42.96% FT id in 263 aa, and to Streptomyces coelicolor anthranilate FT synthase component I TrpE or SCO3214 or SCE8.07c FT SWALL:TRPE_STRCO (SWALL:Q9Z4W7) (511 aa) fasta scores: E(): FT 5.1e-33, 32.27% id in 474 aa" FT /db_xref="GOA:Q83HV6" FT /db_xref="HSSP:1K0E" FT /db_xref="InterPro:IPR005801" FT /db_xref="InterPro:IPR015890" FT /db_xref="InterPro:IPR019999" FT /db_xref="UniProtKB/TrEMBL:Q83HV6" FT /protein_id="CAD67055.1" FT /translation="MEEDRGVFWVDYPVDLSEDFADSCFRYLFEALFYDSENCFWLDDA FT RPLQNRRRSAIGSGPSVSLRSGSCLDPTDVESFFSKLLDCDPQPWPLGFVGWIDYEVGA FT CLLGVNYPTQQDAPATGQTNLSSWICCNRAICIDYRMGLLKIISFSKNTVDAKEWVNRA FT STLVEKLLMKGSIDREDYIPQAKSRHLANSKLMPRNSFASGLQWLHTDQQYLQLIHRVL FT EKIMRGDVYQICLANRLTIRNSGNRSPFSAFWALRQKSPTQYCAYIKIGPRHFVSSSPE FT LFLALSDNILVTEPIKGTRPRGRSPSEDSYLISELKTSEKEKAENLMIVDLMRNDFSKI FT CSSVEVDYMYRVRTYKGLHQLVSRVSGILRPGRGFFDILCATFPAGSVTGAPKIAAVKS FT IYDLERARRGVYSGAFGYISGDGKNICFAMSIRSAVFCNGEVSIGSGGGVVFDSDPEFE FT LAETKLKVAAMIDAILGR" FT misc_feature 93267..94056 FT /note="chorismate binding enzyme Score = 354.4 E-value = FT 8.6e-104" FT CDS 94111..96531 FT /transl_table=11 FT /gene="leuS" FT /locus_tag="TW385" FT /product="leucyl-tRNA synthetase" FT /EC_number="6.1.1.4" FT /note="Similar to Escherichia coli leucyl-tRNA synthetase FT LeuS or b0642 SWALL:SYL_ECOLI (SWALL:P07813) (860 aa) fasta FT scores: E(): 2.5e-64, 37.77% id in 863 aa" FT /db_xref="GOA:Q83HV5" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002302" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q83HV5" FT /protein_id="CAD67056.1" FT /translation="MHALRALDTLCENMEYNFRALEEKWAPIWERDRLFEVDENDSETP FT RKYVLDMFSYPSGDLHMGHAETYAYGDFIARYWRHRGYNVLHPVGWDSFGLPAENAAIK FT HGSDPKVWTYRNIDQQARSMRLYAASFDWSRRLHTSDPEYYRWNQWLFLKLYKHGLAYR FT KKAWVNWDPSDRTVLANEQVLPDGTSERSGALVVKKKLTQWFLRITAYADRLLDDLSML FT ENNWPERVITMQRNWIGRSEGVSIEFNIPTLKRPVMVFTTRPETIFGVTYLALAFDSEV FT TEELASKSGVLGELLELRHNIDKTHESVRGLDLKSFAIHPLTGQSIPIFAASYILSDYA FT KGAVMSVPGHDTRDERFAVRYNLPIVKIMEDNRLISSGKYSGQSVTQARENITRDLCAK FT SLGRREISYRLRDWLISRQRYWGTPIPILYDSNGSEIPVEEDDLPVLLPDSEGIDLTPS FT GLSPLGGIHDWVNLHKAGSLFRRDTDTMDTFFDSSWYFLRYLNPDCDTAPFTLEKAKKW FT GPVDQYCGGVEHAVLHLLYARFITKFLYDIGFVDFKEPFLRLINQGMVVLNGAKMSKSK FT GNIVEFSKEVSQHGVDVIRFALIFSGPPEEDIDWKDVSMTGAARFLSRCIQTAKEVPKR FT TADLSLGDIELRKHTHSLLNDIDWLVDSYRFNVIAARLMDLLNITRKKIQTIGADNPAI FT REAIETIAIALDMFSPYTAEEMWEILGNKYSVSKALFPEVDTTFLEQKTTCAIVQIDGR FT LRGRLNVLTNITTEQLVHSARSLPAIEHALSGRSVKRVICVPPKLVNFVVEPK" FT misc_feature 94180..95941 FT /note="tRNA synthetases class I (I, L, M and V) Score = FT 369.9 E-value = 1.9e-108" FT misc_feature 94276..94305 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT CDS 96613..97194 FT /transl_table=11 FT /locus_tag="TW386" FT /product="putative DNA uptake protein" FT /note="Similar to Thermoanaerobacter tengcongensis DNA FT uptake protein and related DNA-binding proteins ComEA or FT tte0926 SWALL:Q8RB96 (EMBL:AE013058) (196 aa) fasta scores: FT E(): 8.4e-06, 42.64% id in 136 aa, and to Bacillus subtilis FT ComE operon protein 1 ComEA or ComE1 SWALL:CME1_BACSU FT (SWALL:P39694) (205 aa) fasta scores: E(): 0.00054, 33.5% FT id in 197 aa" FT /db_xref="GOA:Q83NL1" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR004509" FT /db_xref="InterPro:IPR010994" FT /db_xref="InterPro:IPR019554" FT /db_xref="UniProtKB/TrEMBL:Q83NL1" FT /protein_id="CAD67057.1" FT /translation="MHKFRWTLSAATSWSFVISLVLASGLLILVYTKPFFGPDKNSKNV FT SFDAIESPAHTSFTATSSGMNMISVHVAGEIVHPGVYSLEAGSRVNNAIIAAGGFKPLS FT DTNSVNLAELLRDGQKIVVLPKDSESSPVNINTADAQRLQSIKGIGKATAKRIIDWRNK FT HGPFKRLEDLKKISGIGNKLIKSIKDKVIL" FT misc_feature 96613..96723 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.948) with cleavage FT site probability 0.625 between residues 37 and 38" FT misc_feature 96649..96708 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 13-32" FT CDS 97191..98609 FT /transl_table=11 FT /locus_tag="TW387" FT /product="putative DNA uptake protein" FT /note="Similar to N-terminal portion of Bacillus subtilis FT ComE operon protein 3 ComEC or ComE3 SWALL:CME3_BACSU FT (SWALL:P39695) (776 aa) fasta scores: E(): 4.4e-06, 24.23% FT id in 487 aa" FT /db_xref="InterPro:IPR004477" FT /db_xref="UniProtKB/TrEMBL:Q83NL0" FT /protein_id="CAD67058.1" FT /translation="MTDFRAVPLALSAWTTSVLLVQHVRLWFLVFALFVPFLFTTFRYT FT AIGCAATSIAICSIFFVIEPIREPPALLSATTTNSVHKLVVRIDSLPRSSAYASNLKCT FT LLEIDTYSDLSVPCALRGDTAYSVGSAIALNGKLKKAPPGRRESVYISPVSDPKPVRHS FT PWYLDWANYLRNGVFEKVSSIPGDGGKLLLGLSVGDTRGVGQSLDKAMKDTSLSHLTAV FT SGSNCAMVVAIIARLFSFLRVRFRVIVSILSLLLFVILVIPDSSIVRAAIMALATLCGL FT YSGRIGVGLPVLSLAVLGMLLWNPWFACDYGFLLSVAATAGILLMSKSIEIRMQSMRFL FT RLNLGPIAPLIAVPLSAQLACQPILVLITPQIPLTGVVANAISEPVVPIATILGLLAVL FT FSPIDMVSHLFLMLGYLPSEWIARVARALAFIPPLPFPGGVLGVMLLITLTLSIIFVVR FT RLTGTTVPMQKSKV" FT misc_feature order(97209..97277,97320..97379,97833..97901,97929..97997, FT 98031..98099,98109..98168,98205..98273,98316..98384, FT 98403..98462,98490..98558) FT /note="10 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 7-29, 44-63, 215-237, FT 247-269, 281-303, 307-326, 339-361, 376-398, 405-424 and FT 434-456" FT misc_feature 97770..98568 FT /note="Competence protein Score = 118.4 E-value = 9.7e-33" FT CDS 98606..99442 FT /transl_table=11 FT /locus_tag="TW388" FT /product="putative DNA uptake protein" FT /note="Similar to C-terminal portion of Bacillus subtilis FT comE operon protein 3 ComEC or ComE3 SWALL:CME3_BACSU FT (SWALL:P39695) (776 aa) fasta scores: E(): 2e-10, 24.83% id FT in 298 aa" FT /db_xref="GOA:Q83NK9" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q83NK9" FT /protein_id="CAD67059.1" FT /translation="MKKYRLAIALSAVLSAIFVYFAAFTGGQNWVVAVCDVGQGDAVMI FT RSNSSIAMVDMGASEKLLDKCMKRFSVQRINLLVISHYDRDHVGGYKSVVGKVDRVLTG FT ENDRLLASVIESTLVKGGASMSRVHKGDTGLLGQMKWEIIWPRRDNPPNLRRGNNGSVV FT IAFRGDKLSMIFLGDLGKPAQQLIFSDFTNTTHGAYDIVKVAHHGSSDQFPMLYKHISA FT KYGIISAGKQNRYGHPTKIALEILRKYGTQPLVTSVSGYISISGNRDNFEIHKEHD" FT misc_feature 98639..98707 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 7-29" FT CDS 99503..100432 FT /transl_table=11 FT /locus_tag="TW389" FT /product="conserved hypothetical protein" FT /note="Weakly similar to Corynebacterium glutamicum FT predicted DNA polymerase III delta subunit cgl2346 FT SWALL:BAB99739 (EMBL:AP005281) (325 aa) fasta scores: E(): FT 4.6e-15, 25.23% id in 325 aa" FT /db_xref="GOA:Q83HV4" FT /db_xref="InterPro:IPR008921" FT /db_xref="InterPro:IPR010372" FT /db_xref="UniProtKB/TrEMBL:Q83HV4" FT /protein_id="CAD67060.1" FT /translation="MSIDPLVLLSGKCEYSANEAIASIRKKITDSLSAPEVHVIYADNY FT SAGELHRLASPSLLFSPRLVIVKQVEECNDIFLDEAMSYIQDPFKDTCVVFRHKSGIRG FT KRLLGELRNIGVEIACPDLTPSRFVSDFFKKEKRNITQAAINLLVESFDDIPELAQFCK FT QIISDTKGTISAKGTISECEIAFLCWSRPGASVFRVVDAAMNGDEAATVLLLSRLLTEG FT GSAIPLVAAASARLRLLVKVKYGKKVTAAPWQIALAKKQLAPWTNSSFMSCILALHAAD FT RALKSTAGNPNYLVEHAMRLIARSARLD" FT CDS complement(100690..101814) FT /transl_table=11 FT /locus_tag="TW390" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83HV3" FT /protein_id="CAD67061.1" FT /translation="MPGVLVHHLSMSAEKRRSITLITPSDLDPISIAAAVGTLSLRRID FT VCYTPDQKLAFDHRLADIQYQIGYGYVPVRSTSCWLWTGRALPESHEAAILSSTRRMVT FT PQGWNIDNPLSPHYSFLTCGPMEVLSPLSTALSIMLVHPSKLTICDMRGLACLIDSELV FT TVTMTKAAINRLDRKERTRARAIWNDCNRHIDNLLINRKDEFDTCFAELLKEAARRNLD FT KRNSRVQALQAELGATESKYRDCSAMCDRMLNHFEIARSRCELQKGSVESARLGNAIKL FT LNLQGTAIKRMKIAEKIRLKILISEEIGNVSFMKTSHLQDVERIIKALTSKYSRLNFEI FT ERVARDLAAGHESSDCKCIDPDDMRSLVVDRVLL" FT CDS complement(101857..103077) FT /transl_table=11 FT /locus_tag="TW391" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR007139" FT /db_xref="UniProtKB/TrEMBL:Q83HV2" FT /protein_id="CAD67062.1" FT /translation="MCTQRLRVARDKGLKMLSDKWGFVDDARNVYLRSNGANVLIGNYP FT DGTPQEALIHYRRKYDAVRKRVEIILTRTLVLYAQPRQIEEQICGLEEEIASPKFLGDI FT TVLRDKLTLARKNLEEAQRNLAERQKKVYEDNYELVAKLEALVNEKNKNGAQRNREAKA FT ILKKWYELEKPKHAGSLHKRMKVAKMELQKDLDNYFKDQRAKNDRVVQQKRSIIQKAKS FT IKRTTDAYARYKTLLNEWKSLPKVPRSQENELWQNFRTATAELVDRHEKSLIEIQEKQN FT AAFEEKVKLLEKGRSILSIDDCRKARREYLVLVDKWEKIGSVPKDKTKSLEDDLRKLDL FT AIRKKENEAWEKNDTEKNLRSRLLLDQLEAKLLSLENSLKVETNTVNSEKIKNEIGKTK FT SFIDIIK" FT CDS 103160..103777 FT /transl_table=11 FT /gene="rpsD" FT /locus_tag="TW392" FT /product="30s ribosomal protein S4" FT /note="Similar to Bacillus stearothermophilus 30s ribosomal FT protein S4 RpsD SWALL:RS4_BACST (SWALL:P81288) (198 aa) FT fasta scores: E(): 4.9e-25, 45.4% id in 196 aa" FT /db_xref="GOA:Q83HV1" FT /db_xref="InterPro:IPR001912" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR005709" FT /db_xref="InterPro:IPR018079" FT /db_xref="UniProtKB/Swiss-Prot:Q83HV1" FT /protein_id="CAD67063.1" FT /translation="MSSCSRTRLSRALGVPLTPKAARLMEVRPYPPGQHGRFRRKGDSD FT YAVRLREKQRLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFAR FT SISQARQLVVHRHILVDGKLVDRPSYSVSPGQTVKVKPKSVPLDPFQVAASGGHADVLP FT PIPGYIEADLEGLSFRLVRRPKRSEVPVTCNVQLVVEYYAAR" FT misc_feature 103172..103427 FT /note="Ribosomal protein S4/S9 N-terminal domain Score = FT 51.1 E-value = 1.7e-12" FT misc_feature 103430..103571 FT /note="S4 domain Score = 69.1 E-value = 6.6e-18" FT CDS 103986..106628 FT /transl_table=11 FT /gene="alaS" FT /locus_tag="TW393" FT /product="alanyl-tRNA synthetase" FT /EC_number="6.1.1.7" FT /note="Similar to Escherichia coli alanyl-tRNA synthetase FT AlaS or LovB or b2697 SWALL:SYA_ECOLI (SWALL:P00957) (876 FT aa) fasta scores: E(): 2.3e-77, 36.58% id in 902 aa" FT /db_xref="GOA:Q83HV0" FT /db_xref="InterPro:IPR002318" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR012947" FT /db_xref="InterPro:IPR018162" FT /db_xref="InterPro:IPR018163" FT /db_xref="InterPro:IPR018164" FT /db_xref="InterPro:IPR018165" FT /db_xref="UniProtKB/Swiss-Prot:Q83HV0" FT /protein_id="CAD67064.1" FT /translation="MLTSDLRLLFLDFFAKRGHKVSPSASLISNDPSVMFTIAGMLPFI FT QCFLALEPPPHPRVVSVQKCIRTSDIDEVGKTPRHGTFFQMMGNFSFGDYFKKEAIEYA FT WEFLLSELDLAPDRLWVTIHGDDKESEKFWLLCGVPQERVQSLDSNFWSTGKAGPAGPC FT SEVFYDLHGGPGPGPEGDPDRYLEVWNLVFMQNLRDNDGHIISSLPKKCVDTGMGLERI FT AMITQGVGTIYDTDELKPILDEAGYISGKRYGKDRRDDISLRVLADHIRSSLMLVADGL FT RPSNEGRGYILRRLLRRSVRAAKLLGIQENCFDQLFAKAAQVMKVGYPELEGKLAEIKQ FT VACLEEQSFSRALNAGTQLLSRSMSSSKKRVSGDLAFRLHDTHGFPIDLITEIAKDSGL FT DVDMDGFFTLMKEQKDRSRAALSRSKPIVSDTTGYEGLRSNFLGYEMLQVDTKITALVK FT DGTILTSAKQGDCVDIALEQTPFYATAGGQEADRGFIESDNFSGKVVTVFSPLPGLTVH FT RCEIVSGLVVSGEVVRASVDSANRFAACQSHTATHVIHAVVREMFGSTSVQMGSYNRAG FT YLRFDFSCSYAPTDSQRIELEERANRAIQSCLEISSTYTTLEKAVASGAIALFGERYGD FT TVRMVEIGGPWSRELCAGTHLRNSSEIAVVSLVSETSVASGIRRVECLTGFDAFSHFAQ FT ERALVDTVMRTLGATRQEMEGAIDDLRENLKRSKHALQTAKDKFLSAFAPRLLQEFKSV FT SSVRILIADLSKFLSGPLFSPFEFTAEDIRAVTLRCKKLLEEPHVLLLAAVISGRVHAA FT CSIDLSSVKLSCMDDLSANNLIKVFLKTLDGSGGGRADFAQGAGWNAKLLDSALDNLKA FT CVIGKLSGV" FT misc_feature 103998..106053 FT /note="tRNA synthetases class II (A) Score = 912.9 E-value FT = 6.3e-272" FT misc_feature 104631..104660 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature 106464..106596 FT /note="DHHA1 domain Score = 18.1 E-value = 4.6e-05" FT CDS 106659..107096 FT /transl_table=11 FT /locus_tag="TW394" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO1500 or SC9C5.24c SWALL:Q9KXQ0 (EMBL:AL357523) FT (167 aa) fasta scores: E(): 1.3e-08, 38.06% id in 134 aa" FT /db_xref="GOA:Q83HU9" FT /db_xref="InterPro:IPR005227" FT /db_xref="InterPro:IPR006641" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/Swiss-Prot:Q83HU9" FT /protein_id="CAD67065.1" FT /translation="MVKSVADRFFLGLDFGSTRIGVARNCGSLAVPVGVLPRASCAEIL FT GYISRYSIDEVVIGLPLTLAGKEKQSARLAKEFSRFLVSSGVQVRFFDERFTTVIATQK FT FYSLGKGVKQIRKCVDAAAATVMLQLFLDMEVKVDPLERKP" FT misc_feature 106680..107058 FT /note="Uncharacterised protein family (UPF0081) Score = FT 73.3 E-value = 3.7e-19" FT misc_feature 107270..108248 FT /note="Uncharacterized BCR, YceG family COG1559 Score = FT 231.6 E-value = 8.2e-67" FT CDS 107279..108280 FT /transl_table=11 FT /locus_tag="TW395" FT /product="conserved hypothetical protein (possibly FT secreted)" FT /note="Similar to Neisseria meningitidis hypothetical FT protein Nmb0669 SWALL:Q9K0E0 (EMBL:AE002421) (331 aa) fasta FT scores: E(): 7e-21, 30.97% id in 339 aa" FT /db_xref="InterPro:IPR003770" FT /db_xref="UniProtKB/TrEMBL:Q83HU8" FT /protein_id="CAD67066.1" FT /translation="MLLKILSLSLAALFLFIAAVFVINVSSVQRAGDIVQVTVPSGTSG FT AKIADILAQNSVIGDKRGFIDLLVAQKVSLRAGVYRLKRGMSPREALLAMLNPENRTSN FT TVVIIEGATLTGIFSALSKKTGIPIVEFEKVASDLSNFPDLPRQASSVEGFLFPATYDI FT EEGATAKSLLLAMYKRMWAEIRTLGIPSENVWRTVVLAALIQKEGIPSDFARVSRVFVN FT RLERGMNLQSDATVLYGLKLSGQVVTTDEQREDKGNPYNTYVHAGLPPGAISNPGASAL FT KAAIYPAPGKWLFFVTWNECTGETIFSETFSEHQKGVDKWLRWRKNHPDGKC" FT misc_feature 107279..107347 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 63-85" FT CDS 108281..109228 FT /transl_table=11 FT /gene="aroE" FT /locus_tag="TW396" FT /product="shikimate 5-dehydrogenase" FT /EC_number="1.1.1.25" FT /note="Similar to Neisseria polysaccharea shikimate FT 5-dehydrogenase AroE SWALL:AROE_NEIPO (SWALL:P95399) (269 FT aa) fasta scores: E(): 0.0029, 36.73% id in 98 aa, and to FT Xylella fastidiosa shikimate 5-dehydrogenase xf0624 FT SWALL:Q9PFN3 (EMBL:AE003908) (282 aa) fasta scores: E(): FT 2e-05, 34.14% id in 123 aa" FT /db_xref="GOA:Q83HU7" FT /db_xref="InterPro:IPR013708" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q83HU7" FT /protein_id="CAD67067.1" FT /translation="MLFTNAVLGLPVSHSLSPKIHSLAYDLLGLPFRYVAKEMTIDGFR FT DFVSKIIDEDYRGLSVTMPLKFLAATCADRLSNLVRRCGAANTLVFESHSEERVGLTDQ FT YLSRISPDQKTFFGKSQLLDPNTQIPSDSEHMPDPRGLSSRILAAYNTDVYGIIRTIFH FT YGLDCSEVAILGCGATAASVLLALEELSCIGNTVIYARNLSAAKSMQKKLCLDLDILPI FT STFKGNFSCVISTLPSDVVLPIPRSVRGTLFDVNYNPWPTGIARSWPTDRVVSGRLMLV FT EQAIAQISLFCFTQLTQEMECLLRDTLYARIVTC" FT misc_feature 108338..109160 FT /note="Shikimate / quinate 5-dehydrogenase Score = 81.6 FT E-value = 1.1e-21" FT CDS 109349..110551 FT /transl_table=11 FT /gene="aroC" FT /locus_tag="TW397" FT /product="chorismate synthase" FT /EC_number="4.6.1.4" FT /note="Similar to Staphylococcus aureus chorismate synthase FT AroC SWALL:AROC_STAAU (SWALL:Q59803) (388 aa) fasta scores: FT E(): 8.8e-59, 43.04% id in 381 aa" FT /db_xref="GOA:Q83HU6" FT /db_xref="HSSP:1Q1L" FT /db_xref="InterPro:IPR000453" FT /db_xref="InterPro:IPR020541" FT /db_xref="UniProtKB/Swiss-Prot:Q83HU6" FT /protein_id="CAD67068.1" FT /translation="MLRWFTAGESHGMELVAILEGLPAGIPVSLEHIGNELSRRRLGFG FT RSARQKFEKDLVTLSAGVLHGSTLGSPVAIRITNSEWGKWEKIMTPEVPCKSDMSDAKR FT AQGLYKPRPGHADLVGMQKYGFQNSRLVLERASARETAARVACGAVAKAFLQQLDIFIL FT SHVKQIGSIKIDYEQGAYPRFCDLEAIDSSPVRCFDKNTSEKMKDELHRIKRCGDTLGG FT VFEVLAYGLPPGLGSYVHWDRRLDAMLSAAIMSIQAVKAVEIGDGLAISALPGSEAHDQ FT IVLESGLLTRMSNHSGGVEGGVTTGSALRISGSMKPISTVPRALKTVDISTRQPANADH FT QRSDICAVPAAAVVGESMVALTISCAILDKFGGDSLCEIKRNFSGYLNSIPKNLMSVIE FT R" FT misc_feature 109352..110459 FT /note="Chorismate synthase Score = 497.9 E-value = FT 5.6e-147" FT misc_feature 109370..109417 FT /note="PS00787 Chorismate synthase signature 1." FT misc_feature 109748..109792 FT /note="PS00788 Chorismate synthase signature 2." FT CDS 110582..111082 FT /transl_table=11 FT /gene="aroK" FT /locus_tag="TW398" FT /product="shikimate kinase" FT /EC_number="2.7.1.71" FT /note="Similar to Lactococcus lactis shikimate kinase AroK FT SWALL:AROK_LACLC (SWALL:P43906) (162 aa) fasta scores: E(): FT 2.1e-08, 30.81% id in 159 aa" FT /db_xref="GOA:Q83HU5" FT /db_xref="HSSP:1KAG" FT /db_xref="InterPro:IPR000623" FT /db_xref="UniProtKB/TrEMBL:Q83HU5" FT /protein_id="CAD67069.1" FT /translation="MAIVLIGPPAVGKTLLGGLVAKRLRVIFNDTDFLVEKFFGPVKEL FT LLTCESQFRDAESICLRNALSRGGVVATGAGCVQRKENQRYISRHLVIFLRTSCDNVAP FT RLCFDTRPVTGDIESWIAVYNKRKDIYSKLADIEFDVNKSSPISLADQLVRFIYNRSWH FT REF" FT misc_feature 110582..111053 FT /note="Shikimate kinase Score = 64.5 E-value = 1.7e-16" FT misc_feature 110600..110623 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 111142..112284 FT /transl_table=11 FT /gene="aroB" FT /locus_tag="TW399" FT /product="3-dehydroquinate synthase" FT /EC_number="4.2.3.4" FT /note="Similar to Escherichia coli 3-dehydroquinate FT synthase AroB or b3389 SWALL:AROB_ECOLI (SWALL:P07639) (362 FT aa) fasta scores: E(): 1e-23, 37.93% id in 290 aa, and to FT Corynebacterium glutamicum 3-dehydroquinate synthase AroB FT or cgl1621 SWALL:AROB_CORGL (SWALL:Q9X5D2) (366 aa) fasta FT scores: E(): 1.4e-40, 40.51% id in 311 aa" FT /db_xref="GOA:Q83HU4" FT /db_xref="InterPro:IPR002658" FT /db_xref="InterPro:IPR016037" FT /db_xref="InterPro:IPR016303" FT /db_xref="UniProtKB/Swiss-Prot:Q83HU4" FT /protein_id="CAD67070.1" FT /translation="MMKKYSLTTHSTETCQILFTSVSNVFKYIPSGTRRILIMYQDSVS FT QVLPIFSAASGVQCYRYLIPDSESAKQLGVAEQCWRFLAQNNFTRSDLIVSCGGGAASD FT LSGFVASSYLRGIKIIHIPTTLIGMVDAAIGGKTGINLKEGKNLVGSFYSPYIVLCDPS FT MLTTLNEEHLKSGLAEIIKCGFIQDESILSILEHNAQDHMDCSQRVCAETLPPKLLEEL FT IHKAVSVKITMVDSDFRDTHKRQFLNYGHTLAHALEAATSHKLSHGQAVSIGMVYAAQV FT AFAKGLIGRNILTRHERILETYGLPVCPPEVQWRNITPYMQRDKKNMQNNDTDSYKDSR FT EIPQISTQSKLVLLRDIANPFITSVSHTVLLEAYEAMFPQ" FT misc_feature 111199..112264 FT /note="3-dehydroquinate synthase Score = 341.6 E-value = FT 6.3e-100" FT CDS 112368..112817 FT /transl_table=11 FT /gene="aroQ" FT /locus_tag="TW400" FT /product="3-dehydroquinate dehydratase" FT /EC_number="4.2.1.10" FT /note="Similar to Actinobacillus pleuropneumoniae FT 3-dehydroquinate dehydratase AroQ SWALL:AROQ_ACTPL FT (SWALL:P43877) (154 aa) fasta scores: E(): 5.2e-19, 45.51% FT id in 145 aa" FT /db_xref="GOA:Q83HU3" FT /db_xref="HSSP:1UQR" FT /db_xref="InterPro:IPR001874" FT /db_xref="InterPro:IPR018509" FT /db_xref="UniProtKB/TrEMBL:Q83HU3" FT /protein_id="CAD67071.1" FT /translation="MSKKKIYILNGPNLAMLGSRQPEIYGTITLEQIKQELTEFSNDVI FT ELLFYQTNDEAEMLDYIYQARQDACGVIINPAAFTHYSYSLSDALILLRERGIAVIEVH FT LSNPYARESFRHKNVISRVVNAQVSGLGVDSYRLALDHIVRKIAC" FT misc_feature 112377..112812 FT /note="Dehydroquinase class II Score = 197.0 E-value = FT 2e-56" FT misc_feature 112392..112445 FT /note="PS01029 Dehydroquinase class II signature." FT CDS 112842..113399 FT /transl_table=11 FT /gene="efp" FT /locus_tag="TW401" FT /product="elongation factor P" FT /note="Similar to Escherichia coli elongation factor P Efp FT or b4147 or z5752 or ecs5128 SWALL:EFP_ECOLI (SWALL:P33398) FT (187 aa) fasta scores: E(): 9.8e-21, 37.01% id in 181 aa, FT and to Corynebacterium glutamicum elongation factor P Efp FT or cgl1619 SWALL:EFP_CORGL (SWALL:Q45288) (187 aa) fasta FT scores: E(): 2.1e-37, 54.89% id in 184 aa" FT /db_xref="GOA:Q83NK8" FT /db_xref="InterPro:IPR001059" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR011768" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013185" FT /db_xref="InterPro:IPR013852" FT /db_xref="InterPro:IPR014722" FT /db_xref="InterPro:IPR015365" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR020599" FT /db_xref="UniProtKB/Swiss-Prot:Q83NK8" FT /protein_id="CAD67072.1" FT /translation="MASTSDIRNGVVLNINGQLNTVIEFQHVKPGKGGAFVRTKLKNIL FT TGKVVDKTFNAGASVVLENVDRRDCTYLYRDADSFVFMDLADYDQIRLTASQVASAANY FT LSDNQKVVIATHNNAPLYVDLPPSVVLAVTHTEPGVQADRSTGGTKPATLETGYQIQVP FT LFITVGTRIRVDTRTGAYIGKA" FT misc_feature 112842..113394 FT /note="Elongation factor P (EF-P) Score = 334.1 E-value = FT 1.1e-97" FT misc_feature 113289..113348 FT /note="PS01275 Elongation factor P signature." FT CDS 113412..114698 FT /transl_table=11 FT /gene="pyrC" FT /locus_tag="TW402" FT /product="dihydroorotase" FT /EC_number="3.5.2.3" FT /note="Similar to Bacillus caldolyticus dihydroorotase PyrC FT SWALL:PYRC_BACCL (SWALL:P46538) (427 aa) fasta scores: E(): FT 1.7e-44, 37.46% id in 387 aa" FT /db_xref="GOA:Q83HU2" FT /db_xref="InterPro:IPR004722" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/TrEMBL:Q83HU2" FT /protein_id="CAD67073.1" FT /translation="MTRQSFFIKNVTLPGLGARTLFLSGGLIQEIICKDIEEHQFLSTK FT NTDKASCRVIDAEGFIALPGLVDLHTHLRNSRDGSIRDVTSAAIAGGYTTVSSMPNMHP FT VQDSPEAVNILKAIAKEDAVCDIRPVGAVTKGLRGNEITDMHSLLDAGVNIFSDDGNCV FT YDPGIIHQALSFAGRNNCVIAQHAQDPTLTKSAQGDTQGPIVAPKSLWPSIAESTIVAR FT DILLARAANARLHVCHVSSQESVYAIAWGKSLGVQVTAEVTPHHLLFYDSLVMTGDTRF FT KVNPPLRSKESVECLRDALIRGVIDVVATDHAPHRNKSPFWHSAPNGMTGLEFSVSVIQ FT KIFVNSGHLTWPEVVRIMSNKPAEILGMTPNTVKEGSAANFFLYNPDVTRFVTFDDSLG FT PSVNSPYAGMNLPGKVMYTFYEGRLVFEN" FT misc_feature 113568..114684 FT /note="Dihydroorotase-like Score = 247.0 E-value = 1.8e-71" FT CDS 114740..115885 FT /transl_table=11 FT /gene="carA" FT /locus_tag="TW403" FT /product="carbamoyl-phosphate synthase small chain" FT /EC_number="6.3.5.5" FT /note="Similar to Sulfolobus solfataricus FT carbamoyl-phosphate synthase small chain CarA or Sso0640 FT SWALL:CARA_SULSO (SWALL:Q59968) (367 aa) fasta scores: E(): FT 1.2e-37, 34.21% id in 380 aa, and to Streptomyces FT coelicolor carbamoyl-phosphate synthase small chain CarA or FT PyrAa or SCO1484 or SC9C5.08c SWALL:CARA_STRCO FT (SWALL:Q9KXR5) (380 aa) fasta scores: E(): 3.4e-74, 52.29% FT id in 371 aa" FT /db_xref="GOA:Q83HU1" FT /db_xref="HSSP:1CE8" FT /db_xref="InterPro:IPR000991" FT /db_xref="InterPro:IPR001317" FT /db_xref="InterPro:IPR002474" FT /db_xref="InterPro:IPR006220" FT /db_xref="InterPro:IPR006274" FT /db_xref="InterPro:IPR011702" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:Q83HU1" FT /protein_id="CAD67074.1" FT /translation="MLSFRSAVFVMEDGSCFEGVPFGAVGTAFGEAVFSTCMTGYQEVF FT TDPSYTAQILVMTAVHVGNTGINDFDNESDRMWPSGVVIRDPSPIASSFLAKMDLAKAL FT ASEGVIGISEVDTRAIVRKLRTSGAMRAGIFSQPDRPLPDLVDQIRGTQSMHMRSLTSE FT VSTTSRRFISSESHFATLLVLDLGVKKSTINLLLEQGFDIWLMPHNISFDEAMQIKPDA FT IFYSNGPGDPAASGTQVDLLRSLLRAGLPYFGICFGNQLLARALGFETKKLLFGHRGIN FT QPVFNRATKQVEITSQNHGFSVDMPIDRISVSPLNFGRVEVSHYCLNDYEVEGIRCLDI FT PAMSVQYHPESCAGPHDSRYLFREFRRMVEGHLERRYNAEP" FT misc_feature 114752..115196 FT /note="Carbamoyl-phosphate synthase small chain, CPSase FT domain Score = 205.4 E-value = 6e-59" FT misc_feature 115283..115841 FT /note="Glutamine amidotransferase class-I Score = 152.0 FT E-value = 7.3e-43" FT misc_feature 115490..115525 FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT CDS 115872..119183 FT /transl_table=11 FT /gene="carB" FT /locus_tag="TW404" FT /product="carbamoyl-phosphate synthase large chain" FT /EC_number="6.3.5.5" FT /note="Similar to Escherichia coli carbamoyl-phosphate FT synthase large chain CarB or PyrA or b0033 SWALL:CARB_ECOLI FT (SWALL:P00968) (1072 aa) fasta scores: E(): 9.4e-176, FT 49.22% id in 1099 aa" FT /db_xref="GOA:Q83HU0" FT /db_xref="HSSP:1M6V" FT /db_xref="InterPro:IPR005479" FT /db_xref="InterPro:IPR005480" FT /db_xref="InterPro:IPR005481" FT /db_xref="InterPro:IPR005483" FT /db_xref="InterPro:IPR006275" FT /db_xref="InterPro:IPR011607" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/TrEMBL:Q83HU0" FT /protein_id="CAD67075.1" FT /translation="MPNPRDIGSVLVIGSGPITIGQACEFDYSGTQACRVLKEEGIRVI FT LLNSNPATIMTDPEFSDATYIEPMTIEVLEAILDKERPDAVLPTLGGQTALNLAMQLHN FT KGLLEKYGTQLIGATPEVIARGENREMFRHIVLSSGAEVATSEVITSVEGAVLFAQKNG FT YPLVIRPSYTMGGLGSSLVHTESELVDSVKQGIEASPNGQVLLEESIVGWKEYELELMR FT DVAGNTVIVCSIENIDPVGVHTGDSVTVAPAMTLTDREYQNLRNIAIAIIRMIGINTGG FT CNIQFAVNPTDGRVVVIEVNPRVSRSSALASKATGFPIAKLAAKLALGYRLHEIKNDIT FT KKTFASFEPSLDYVAVKIPLFAFEKFPKANPELTTSMKSVGEVMAIGRNFTTALQKAMR FT SLDQPHMCFHWQPFESPGHSIASDVPDPREYYLDFIRTPLPSRLVAIQQALRFGASIDE FT VHEASRIDKWFVSQIDLINKTADSLKDLSMDCLSRAKRHGFSDRQIADLLRIDEEDVRK FT RRSALGIAPVYKTVDTCAGEFPAVTPYYYSSYDSENEAIPSPSRKVIIIGSGPNRIGQG FT IEFDYSCVHAAMALSGMGIETVMINCNPETVSTDYDTSDRLYFEPLTLEDVLEVISVEQ FT RNGDLLGVIAQLGGQIPLSLAKSIQHEGIPILGTSPESIDLAENRDLFSNLLRSLNLPT FT YEHRTVSNKDEAIIAANKMGFPVLLRPSFVLGGRGMKVIHDSQALEDYFNTFHAVDSEH FT PLLIDKFLSDAIEVDVDALYDKHELFIGGIMEHIEEAGIHSGDSSCTIPPVTLGKNIVN FT QIVSTTHAIARTLSVLGPVNIQFAIASGILYVLEANPRSSRTLPFVSKATGIPLAKAAT FT RIMLGHTIEDLQREGLLPQRDMRFFNPTDPIAVKEVILPFKRFRTKSGEFLDTLLGPEM FT QSTGEVMGIGPTFPIAFAKSQQAAFSELPRTGAIFVSVADHDKRKVVLPAMRFYKLGFK FT IFATSGTADTLRRFGIDVVTIQKFSEAKKTSSRSVVDLIREGRISLVINTPSGGVSIAD FT GYEIRVTALACEIPVFTTISEMNAAVISLESGSHEIASLQELYSSRARSAENLCG" FT misc_feature 115887..116247 FT /note="Carbamoyl-phosphate synthase L chain, N-terminal FT domain Score = 175.9 E-value = 4.8e-50" FT misc_feature 116253..116958 FT /note="Carbamoyl-phosphate synthase L chain, ATP binding FT domain Score = 360.7 E-value = 1.1e-105" FT misc_feature 116361..116405 FT /note="PS00866 Carbamoyl-phosphate synthase subdomain FT signature 1." FT misc_feature 116760..116783 FT /note="PS00867 Carbamoyl-phosphate synthase subdomain FT signature 2." FT misc_feature 117162..117516 FT /note="Carbamoyl-phosphate synthetase large chain, FT oligomerisation domain Score = 177.0 E-value = 2.1e-50" FT misc_feature 117546..117900 FT /note="Carbamoyl-phosphate synthase L chain, N-terminal FT domain Score = 72.6 E-value = 5.7e-19" FT misc_feature 117906..118530 FT /note="Carbamoyl-phosphate synthase L chain, ATP binding FT domain Score = 68.4 E-value = 1.1e-17" FT misc_feature 118014..118058 FT /note="PS00866 Carbamoyl-phosphate synthase subdomain FT signature 1." FT misc_feature 118401..118424 FT /note="PS00867 Carbamoyl-phosphate synthase subdomain FT signature 2." FT misc_feature 118761..119064 FT /note="MGS-like domain Score = 97.1 E-value = 2.4e-26" FT CDS 119180..120091 FT /transl_table=11 FT /gene="pyrF" FT /locus_tag="TW405" FT /product="orotidine 5'-phosphate decarboxylase" FT /EC_number="4.1.1.23" FT /note="Similar to Mycobacterium smegmatis orotidine FT 5'-phosphate decarboxylase PyrF SWALL:PYRF_MYCSM FT (SWALL:O08323) (276 aa) fasta scores: E(): 4.1e-22, 38.79% FT id in 281 aa, and to Myxococcus xanthus orotidine FT 5'-phosphate decarboxylase PyrF or UraA SWALL:PYRF_MYXXA FT (SWALL:P24220) (288 aa) fasta scores: E(): 3.4e-16, 30.43% FT id in 276 aa" FT /db_xref="GOA:Q83HT9" FT /db_xref="InterPro:IPR001754" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR011995" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q83HT9" FT /protein_id="CAD67076.1" FT /translation="MISFGDRLQNAFTDFGHLCVGIDPHEWILEQWGLPNSPAGAQEFA FT LRILDLSSEHVGLYKVQVAFYERFGSKGIFALEEVISAIRSTGALVIADGKRGDISSTM FT SGYAKAWLCRDSRLFSDALTVSPYVGLGSFKGSIDIARQNGAGLFFLAATSEMHAFPIQ FT SAILQDRQGTFGESSGSILSCSDITVASYIFESIGTLVGNPSDCSSFGVVLSATSDLLS FT LGIGCNLSEFSRVMPILAPGFGYQGVELKDSRKRFGSLISNLIISESRSLLASGPRRFS FT ALVNTRSEELRSLFDDSHENAG" FT misc_feature 119225..120017 FT /note="Orotidine 5'-phosphate decarboxylase / HUMPS family FT Score = 52.7 E-value = 5.5e-13" FT CDS 120443..121024 FT /transl_table=11 FT /gene="gmk" FT /locus_tag="TW406" FT /product="guanylate kinase" FT /EC_number="2.7.4.8" FT /note="Similar to Escherichia coli guanylate kinase Gmk or FT SpoR or b3648 SWALL:KGUA_ECOLI (SWALL:P24234) (207 aa) FT fasta scores: E(): 4.2e-19, 39.42% id in 175 aa, and to FT Streptomyces coelicolor guanylate kinase Gmk or SCO1479 or FT SC9C5.03c SWALL:KGUA_STRCO (SWALL:Q9KXS0) (197 aa) fasta FT scores: E(): 2e-31, 50.55% id in 180 aa. Note possible FT alternative upstream translational start sites." FT /db_xref="GOA:Q83HT8" FT /db_xref="InterPro:IPR008144" FT /db_xref="InterPro:IPR008145" FT /db_xref="InterPro:IPR017665" FT /db_xref="InterPro:IPR020590" FT /db_xref="UniProtKB/Swiss-Prot:Q83HT8" FT /protein_id="CAD67077.1" FT /translation="MQLFDLWTDLLDLLTIVAGPTAVGKGTVISHLRKCHPQVKVSISA FT TTREPRDSERDGIDYYFVTDEVFDCMVRSGQMLEWATVHGLHKYGTPKEEVERLLHTGQ FT PVILEIDLQGMRKVRKILPAVRTVILLPPAWDDLICRIKRRGSESQDEIDARLATAKKE FT LEAIGEFDYKIVNADVEIAANELWLAMNRV" FT misc_feature 120578..120631 FT /note="PS00856 Guanylate kinase signature." FT misc_feature 120581..120896 FT /note="Guanylate kinase Score = 89.2 E-value = 6e-24" FT CDS 121147..121404 FT /transl_table=11 FT /gene="rpoZ" FT /locus_tag="TW407" FT /product="DNA-directed RNA polymerase omega chain" FT /EC_number="2.7.7.6" FT /note="Similar to Thermus aquaticus DNA-directed RNA FT polymerase omega chain RpoZ SWALL:RPOZ_THEAQ (SWALL:Q9EVV4) FT (98 aa) fasta scores: E(): 2.9, 29.16% id in 72 aa, and to FT Streptomyces coelicolor probable DNA-directed RNA FT polymerase omega chain RpoZ or SCO1478 or SC9C5.02c FT SWALL:RPOZ_STRCO (SWALL:Q9KXS1) (90 aa) fasta scores: E(): FT 3e-10, 56.71% id in 67 aa" FT /db_xref="GOA:Q820D7" FT /db_xref="InterPro:IPR003716" FT /db_xref="InterPro:IPR006110" FT /db_xref="UniProtKB/Swiss-Prot:Q820D7" FT /protein_id="CAD67078.1" FT /translation="MEEDRGIADPPLDSLLSRSGSKYGLVIYAAKRARQIDQYYIDLHE FT GSFYAHVGPLVSVDADDKSLTVAMREIAEDKLDLKSSAAE" FT misc_feature 121198..121393 FT /note="RNA polymerase Rpb6 Score = 46.6 E-value = 3.8e-11" FT CDS 121401..122633 FT /transl_table=11 FT /locus_tag="TW408" FT /product="putative flavoprotein" FT /note="Similar to many predicted flavoproteins eg. FT Mycobacterium tuberculosis DNA/pantothenate metabolism FT flavoprotein homolog Dfp or rv1391 or mt1436 or mtcy21b4.08 FT SWALL:DFP_MYCTU (SWALL:P71661) (418 aa) fasta scores: E(): FT 7.4e-51, 42.05% id in 409 aa" FT /db_xref="GOA:Q83NK7" FT /db_xref="HSSP:1E20" FT /db_xref="InterPro:IPR003382" FT /db_xref="InterPro:IPR005252" FT /db_xref="InterPro:IPR007085" FT /db_xref="UniProtKB/TrEMBL:Q83NK7" FT /protein_id="CAD67079.1" FT /translation="MMQNAIGRIFLGVCGSISAYKSVYLARLFVKEGYDVRVGFTNGAS FT QFVTGEPFRVFTGHHVLNFPCDDQSHIDISRWADAIVVAPATANILAAARAGLASDIVT FT QTILSSRSPVLFVPSMHTAMWENPATRDNVNCLLERGYHVLGPVTGDLSSGDWGIGRMV FT DPCEIVQYVSRSLLNHQTGKLSGKKFLITAGGTRQPIDPVRYIGNRSSGKQAIAIAKEA FT QKRSAEVILIAANVEAVTLPTGMRVITVATAEEMRKALSDNIDTSDVVIMAAAVSDFQP FT REVASQKIKSNDGWTLQLISTDDLLRELASNKSRPRVLVGFSAETEESANCRIDIARQK FT LLSKGCDYMVVNQVGFDVGFDVSDTEVSLIDDKQVFFTARGSKDYIAKRILDFLSERVI FT VTYIDPLDRSL" FT misc_feature 121419..121755 FT /note="Flavoprotein Score = 110.4 E-value = 2.5e-30" FT misc_feature 121947..122517 FT /note="DNA / pantothenate metabolism flavoprotein Score = FT 114.7 E-value = 1.2e-31" FT CDS 122643..123830 FT /transl_table=11 FT /gene="metK" FT /locus_tag="TW409" FT /product="S-adenosylmethionine synthetase" FT /EC_number="2.5.1.6" FT /note="Similar to Bacillus subtilis S-adenosylmethionine FT synthetase MetK or MetE SWALL:METK_BACSU (SWALL:P54419) FT (400 aa) fasta scores: E(): 1.3e-77, 52.8% id in 392 aa" FT /db_xref="GOA:Q83HT7" FT /db_xref="InterPro:IPR002133" FT /db_xref="UniProtKB/Swiss-Prot:Q83HT7" FT /protein_id="CAD67080.1" FT /translation="MILTSESVTEGHPDKLCDQISDAILDGVICKDKNARAGIETIAGN FT GVVHVFGEVSNPDSVDIPGIIRKTILDIGYTSEDAGIDGNTCSIQESITSQSKEIADAV FT NFSLEYRNQQGDLGRNSFSQQGSGDQGSVFGYACRETPEMMPLPITIAHKLAYSLAFVR FT KEKILPYLLPDGKSQVTLGYDSANRPKTLETVVISAQHEDSVDLDKLRFDILERVVRPV FT ISATGLDCSKATFLINPAGRFVTGGPSADSGLTGRKIVVDTYGCAAKHGGGALSGKDPS FT KLDRFASYMARWVAKHVVAADFAESIEVQISYAIGKAHPVAFNIDTHGTSTIALDKLKC FT AILKVFDFRPAAVIDSLDLKRPIYQKTAAYGHFGRDIFTWERICPDKLNALLGAV" FT misc_feature 122643..122937 FT /note="S-adenosylmethionine synthetase, N-terminal domain FT Score = 125.2 E-value = 8.5e-35" FT misc_feature 123009..123369 FT /note="S-adenosylmethionine synthetase, central domain FT Score = 174.5 E-value = 1.2e-49" FT misc_feature 123375..123822 FT /note="S-adenosylmethionine synthetase, C-terminal domain FT Score = 227.1 E-value = 1.8e-65" FT CDS 123831..125705 FT /transl_table=11 FT /locus_tag="TW410" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis putative FT primosomal protein N' PriA or Rv1402 or mt1446 or FT mtcy21b4.19 SWALL:PRIA_MYCTU (SWALL:P71670) (655 aa) fasta FT scores: E(): 2.5e-18, 30.1% id in 598 aa" FT /db_xref="UniProtKB/TrEMBL:Q83HT6" FT /protein_id="CAD67081.1" FT /translation="MPRVAKVLLNLSGRDILLDYFVPDGLHINRGHLVTVPFRGKICEG FT YVLNIHTPESYVGHLRFIHDKPLEIPVLTRDISLLAHRIARRNCSQIGNLLHLAIPKRR FT VRVEKAFSKNLSGIKDTDPPVQSQDFALFSQRVRLTSRCRYSLCVPIGIDTQGIQPWAH FT EFAALATQCYRSGRTAILAVPDQKCQRQLIKALSKVPELRNDDIKILNSNQTSSDRYKN FT FLDCLLDRERIIVGNRSVIYAPSNNLGLIAIWDEANYAFLEHRTPYPHIRDIALIRQQI FT SGCVLLFACHIPSMPVMYLEKTGHIECVGYAYRRRPKLFVPKEPGQIPSDAIRVMRNAL FT DTGPVLVQVQQKGHIQSFSCANCGQLARCKDCSGPLTKTSFYGTSQCKWCAKIADNACS FT ICGSQKIVMLRRGSGRTAYELTQAFPGCNVLTSDSSNPIELLDVKMLKGTIVVSTCGSE FT PLVSQGYAAVLILDANTMAVRQNFETAYSTLKRWTAAISLLRHDGTLIIPGIVNRLVRA FT IGAWQLVSYLETELEHRITLKLPPAVRIFSITGRKSEIDIIALHLREFDPVRVFGPISQ FT DDSKFRLIVMNDFKDVNRVMDFVKKMLDSLRGSSIKIRCDDPEILDEI" FT CDS 125695..126654 FT /transl_table=11 FT /gene="fmt" FT /locus_tag="TW411" FT /product="methionyl-tRNA formyltransferase" FT /EC_number="2.1.2.9" FT /note="Similar to Escherichia coli methionyl-tRNA FT formyltransferase Fmt or b3288 SWALL:FMT_ECOLI FT (SWALL:P23882) (314 aa) fasta scores: E(): 1.9e-19, 32.57% FT id in 307 aa, and to Streptomyces coelicolor methionyl-trna FT formyltransferase fmt or sco1473 or scl6.30C SWALL:Q9L0Y6 FT (EMBL:AL159139) (310 aa) fasta scores: E(): 4e-26, 34.81% FT id in 316 aa" FT /db_xref="GOA:Q83HT5" FT /db_xref="HSSP:2FMT" FT /db_xref="InterPro:IPR002376" FT /db_xref="InterPro:IPR005793" FT /db_xref="InterPro:IPR011034" FT /db_xref="InterPro:IPR015518" FT /db_xref="UniProtKB/TrEMBL:Q83HT5" FT /protein_id="CAD67082.1" FT /translation="MKSSLRIVYAGTSSVALPALRCIKTSQHTLVGVLAKRVPADLCST FT DLNNVISVQAQNWQIPVIEAPILRPPKSCTKSALARYELAREKIHSLAPDIGVIVSYGV FT LLGEEILSIPRFGWINLHFSLLPQFRGAAPVQRAIMNGLDSSGFTIFRLERELDSGAIL FT ESKRYTFSRNLNSGEEILKMAEYSAPFLVEVLDSLDSKLEAAVPQKGSVTHAPKLTYNE FT CQIDWTQNSEKILRLIRAANPDPSAYFFENNKRIKVISAKQPSDCFASSLAPGELVMLD FT KKVFVGTADLPVELVLLHPEGKNKMSGYAWWCGLRTRH" FT misc_feature 125707..126277 FT /note="Formyl transferase Score = 53.1 E-value = 4.3e-13" FT misc_feature 126346..126640 FT /note="Formyl transferase, C-terminal domain Score = 50.7 FT E-value = 2.3e-12" FT CDS 126954..127613 FT /transl_table=11 FT /gene="rpe" FT /locus_tag="TW413" FT /product="D-ribulose-5-phosphate 3-epimerase" FT /EC_number="5.1.3.1" FT /note="Similar to Streptomyces coelicolor FT ribulose-phosphate 3-epimerase Rpe or SCO1464 or SCl6.21c FT SWALL:RPE_STRCO (SWALL:Q9L0Z5) (228 aa) fasta scores: E(): FT 3.3e-32, 44.97% id in 209 aa, and to Oryza sativa FT D-ribulose-5-phosphate 3-epimerase SWALL:Q9SE42 FT (EMBL:AF189365) (228 aa) fasta scores: E(): 8.5e-23, 36.57% FT id in 216 aa" FT /db_xref="GOA:Q83HT4" FT /db_xref="HSSP:1RPX" FT /db_xref="InterPro:IPR000056" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q83HT4" FT /protein_id="CAD67083.1" FT /translation="MKIRISPSILSADFCNLERDLQLISSADMVHVDVMDGHFVPNITF FT GLPVVKRICEVSPVPLDVHLMVENPDYWALQYADLGVYSVTFHFEAAKDPIATARNIRS FT NKSKVGLAVSPDTDIGECVHVLPEVDMLQVMTVYPGFGGQKLIRRVLDKFSRITRSEFE FT NLSFSVDGGVTLGNISEIASVGVDTFVAGSSVFLSQLPADSVESLRKLAKVAYKRS" FT misc_feature 126981..127548 FT /note="Ribulose-phosphate 3 epimerase family Score = 217.1 FT E-value = 1.8e-62" FT misc_feature 127041..127085 FT /note="PS01085 Ribulose-phosphate 3-epimerase family FT signature 1." FT CDS complement(127660..128754) FT /transl_table=11 FT /locus_tag="TW414" FT /product="putative sugar-1-phosphate FT nucleotidyltransferase" FT /note="Similar to Escherichia coli mannose-1-phosphate FT guanylyltransferase ManC or RfbM SWALL:RFM7_ECOLI FT (SWALL:P37741) (464 aa) fasta scores: E(): 2.1e-32, 33.51% FT id in 367 aa, and to Deinococcus radiodurans FT mannose-1-phosphate guanylyltransferase dra0032 FT SWALL:Q9RZC2 (EMBL:AE001862) (372 aa) fasta scores: E(): FT 2.4e-38, 35.09% id in 359 aa" FT /db_xref="GOA:Q83HT3" FT /db_xref="InterPro:IPR001538" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/TrEMBL:Q83HT3" FT /protein_id="CAD67084.1" FT /translation="MDCSELYSVIPAGGIGSRLWPLSRAASPKFLHKLTGTETSLLRDT FT WDRLVPISGVDRIMVVIGSDHFDAVTSQLPELKGHNVILEPEPKDSTAAICLAAAILNT FT REPDVIIGSFPADHVIKTSPLFQQSVAQAVVAANEGYVVTIAITPTEPATQFGYILCGD FT SAGIKGAPQVLSVKRFVEKPSQKDADRYLSSGKYLWNAGMFIAKACVLLEQLEKARPDI FT HSLIIDIANSPDLDSALKKNWPKMPRIAIEYSVAEPCAAEGRMVTVPAKFEWNDAGDFS FT SIARLNSRGGSDLVILGETSRVLSDSATGIVVSQTDRIISVIGTKDIVVVDTPDSLLVT FT TKDDAKKVKQIVEALRLSGRDDVL" FT misc_feature complement(127674..127806) FT /note="Mannose-6-phosphate isomerase Score = 34.0 E-value = FT 6.3e-09" FT misc_feature complement(127878..128736) FT /note="Nucleotidyl transferase Score = 156.0 E-value = FT 4.6e-44" FT CDS 128949..130019 FT /transl_table=11 FT /gene="pstS" FT /locus_tag="TW415" FT /product="ABC transporter phosphate-binding lipoprotein" FT /note="Similar to Mycobacterium tuberculosis FT phosphate-binding protein 2 precursor PstS2 or rv0932c or FT mt0959 or mtcy08d9.07 SWALL:PST2_MYCTU (SWALL:O05870) (370 FT aa) fasta scores: E(): 2.1e-28, 32.94% id in 340 aa" FT /db_xref="GOA:Q83HT2" FT /db_xref="InterPro:IPR005673" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:Q83HT2" FT /protein_id="CAD67085.1" FT /translation="MCRLDRKLFLVFASVVTLFSVSCFGNSKTSLEGSVSVTGASSQSV FT AQSVWISEFRKIHPGVTVNYEPQGSGAGRRAFLSGAVDLAATDVPFADPELTGDFKGCT FT ADGPLQLPVYISPIAIAYNLPGVSDLKLDASVIAGIFSGAITTWDSPRISALNPGIELP FT SKKITAVHRSDNSGTTENFSDYIHTNAPSDWPHKPSTKFPYTYGEAAKGTSGVAQVLKA FT TVGSIGYLDLSLARGMSLATLKVGSGFSKPSAESATLTVSDSEFPSKNPNSFSVKINRR FT TEKAGAWPLILVSYVVACVGYKKGNKDAIFSYLKFILSEKAQGQAAQQAGSAPLPESLS FT KKLLELVNKIAEKNGA" FT misc_feature 128949..129074 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.999) with cleavage FT site probability 0.256 between residues 42 and 43" FT misc_feature 128985..129017 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 129042..129975 FT /note="Phosphate-binding protein Score = 249.1 E-value = FT 4.3e-72" FT CDS 130102..131001 FT /transl_table=11 FT /gene="pstC" FT /locus_tag="TW416" FT /product="phosphate ABC transporter permease" FT /note="Similar to Mycobacterium tuberculosis phosphate FT transport system permease protein PstC-2 or Rv0929 or FT mt0956 or mtcy21c12.23 SWALL:PSC2_MYCTU (SWALL:O86344) (324 FT aa) fasta scores: E(): 2.8e-30, 40.83% id in 289 aa, and to FT Escherichia coli phosphate transport system permease FT protein PstC or PhoW or b3727 or z5218 or ecs4663 FT SWALL:PSTC_ECOLI (SWALL:P07653) (319 aa) fasta scores: E(): FT 6.4e-25, 34.01% id in 294 aa" FT /db_xref="GOA:Q83NK6" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR011864" FT /db_xref="UniProtKB/TrEMBL:Q83NK6" FT /protein_id="CAD67086.1" FT /translation="MRKDFFLYVCLLSGVCILAILSSVLIFLGLQALPVLTNPDLVLPS FT GSVGIWDYVVPLGFGSIWVSFLALLLAVPFSIYFALFTTFYIPQGLSKLVGRVVDFLGA FT VPSIVFGLWGVTVIAPAMVPVYEWLGTHFPWLPFFTGNISTTGRTVFTAAVILAVMALP FT IITALCREIFFQIPRFLIEGAFALGATRFEVMKLVVIPLSKAGIVSAAVLGLGRAIGET FT IAVALILSSSGVINFSLIAAQAPSTIAANIALQFPEAQGNLLAALIASGLVLFVVSFLI FT NLVARKITNRQIKVLRGI" FT misc_feature 130102..130212 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.998) with cleavage FT site probability 0.362 between residues 37 and 38" FT misc_feature order(130114..130182,130276..130344,130402..130470, FT 130540..130608,130777..130845,130888..130956) FT /note="6 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 5-27, 59-81, 101-123, FT 147-169, 226-248 and 263-285" FT misc_feature 130615..130837 FT /note="Binding-protein-dependent transport systems inner FT membrane component Score = 40.2 E-value = 3.3e-09" FT misc_feature 130618..130704 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 131068..131961 FT /transl_table=11 FT /gene="pstA" FT /locus_tag="TW417" FT /product="phosphate ABC transporter permease" FT /note="Similar to Mycobacterium tuberculosis phosphate FT transport system permease protein PstA-1 or Rv0930 or FT mt0957 or mtcy21c12.24 SWALL:PSA1_MYCTU (SWALL:O86345) (305 FT aa) fasta scores: E(): 6.3e-39, 43.35% id in 286 aa, and to FT Escherichia coli phosphate transport system permease FT protein PstA or PhoT or b3726 SWALL:PSTA_ECOLI FT (SWALL:P07654) (296 aa) fasta scores: E(): 1.7e-29, 37.5% FT id in 280 aa" FT /db_xref="GOA:Q83NK5" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR005672" FT /db_xref="UniProtKB/TrEMBL:Q83NK5" FT /protein_id="CAD67087.1" FT /translation="MTKLPPRKNMHKRRVRNRVFTCVVYASFVIAILPLLSLFYTTIAS FT GLGRFDIAFFTRTMDGTVNAGGGALHAIMGSFEITILAALIGIPLGLLVAIFLVEYGSG FT GFLSRTVALGVDVMAGIPSIVVGLFVYAFFSLVLDQPGIRSGFLGAVALSILMLPIVIR FT SAVEVLRLVPNDLREAAYALGTPKWRTILFIVLPTAFSGIATGSALAIARAVGETAPLL FT IVAGFTNSLNLNPFVGRMMTLPVYVYTQYSSPGVDVGAFLDRSWSAALVLIAIAVSFYI FT LAQIVSKMIAPKSTNR" FT misc_feature 131068..131205 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.390 between residues 46 and 47" FT misc_feature order(131128..131196,131296..131364,131398..131466, FT 131494..131553,131635..131703,131860..131928) FT /note="6 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 21-43, 77-99, 111-133, FT 143-162, 190-212 and 265-287" FT misc_feature 131569..131815 FT /note="Binding-protein-dependent transport systems inner FT membrane component Score = 67.2 E-value = 2.5e-17" FT misc_feature 131572..131658 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT CDS 131972..132745 FT /transl_table=11 FT /locus_tag="TW418" FT /product="phosphate ABC transporter ATP-binding protein" FT /note="Similar to Mycobacterium smegmatis putative ABC FT transporter nucleotide binding subunit Mtp1 SWALL:O68469 FT (EMBL:AF045938) (258 aa) fasta scores: E(): 4.9e-48, 57.52% FT id in 259 aa, and to Bacillus subtilis hypothetical ABC FT transporter ATP-binding protein YqgJ yqgJ SWALL:YQGJ_BACSU FT (SWALL:P46341) (269 aa) fasta scores: E(): 7.5e-40, 50.78% FT id in 256 aa" FT /db_xref="GOA:Q83HT1" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005670" FT /db_xref="InterPro:IPR015850" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/Swiss-Prot:Q83HT1" FT /protein_id="CAD67088.1" FT /translation="MTSLLEIKDLTAFYGPLRAIKDVSLSIQEGSVTALIGPSGCGKST FT LLRTLNRMHELSPGAKVKGQVLLDGRDLYQLDPVYVRQEVGMISQRPNPFPTMSIRENV FT LAGIKLNRKRIHRIQQNELMERCLRSVNLWDEVHNRLGRPGGELSGGQQQRLCIARAIA FT VSPRVILMDEPCSALDPVSTKAIEQLICKLKEKHTIVIVTHNMQQASRVSDWTAVFNVA FT RSGGSGELVEHDKTEVIFTSPKNEVTLNYISGKFG" FT misc_feature 132059..132629 FT /note="ABC transporter Score = 208.9 E-value = 5.3e-60" FT misc_feature 132080..132103 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 132413..132457 FT /note="PS00211 ABC transporters family signature." FT tRNA complement(132763..132838) FT /note="tRNA Arg anticodon CCG, Cove score 73.51" FT CDS 132981..134633 FT /transl_table=11 FT /gene="argS" FT /locus_tag="TW419" FT /product="arginyl-tRNA synthetase" FT /EC_number="6.1.1.19" FT /note="Similar to Corynebacterium glutamicum arginyl-tRNA FT synthetase ArgS or cgl1179 SWALL:SYR_CORGL (SWALL:P35868) FT (550 aa) fasta scores: E(): 1.2e-80, 40.61% id in 554 aa" FT /db_xref="GOA:Q83HT0" FT /db_xref="InterPro:IPR001278" FT /db_xref="InterPro:IPR005148" FT /db_xref="InterPro:IPR008909" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015945" FT /db_xref="UniProtKB/Swiss-Prot:Q83HT0" FT /protein_id="CAD67089.1" FT /translation="MEDLKKSVTNIVHSMYNFDCSEIVSLTRPPKPEYGDWALSLPLKL FT ASLLKSPAIDIAQSIASALLELDGVQDVYVAKPGFINLKLSREHTTGIISEVLEQGSSF FT GRNTTQSSKKINLEFVSGNPTGPLHLAHTRWAAVGDSIARILINCGADVTREYYINNVG FT NQIHLFSESVYARALSKSLPKDGYPGEYVKDIARRIQCEFPNIIDLSYEDAIKIFRKRS FT WQIQIEEIKKSCIAFRVNFDVWFSEESLHEPDRFGKSQIDKALARCKQNGYLFQKNGAF FT FIRTTEFGDDKDRAVLRSDTSYTYYAADCAYYLNKINRGFSDLVILVGADHHGYVKRFQ FT AMSNIFHVDSENNRKNVQVLLGQMVSLKNKRQSKREGNVIGLSEIIQSVGVDPLRFWFC FT RYPIDTPIDLDEQHLKKRSNDNPVYYVQYAYARTRSLIRSANLLQMEKFGFFPELLVHE FT TETALVSLLYDYKTVVIDAARFLQPHRVVRYLESLAGAYHKWYDKCRIIPRKGILDKSE FT AELVNTRLELNRAVGQVLYNALDLIGVSAPERM" FT misc_feature 132984..133233 FT /note="Arginyl tRNA synthetase N terminal domain Score = FT 52.6 E-value = 6.1e-13" FT misc_feature 133239..134211 FT /note="tRNA synthetases class I (R) Score = 236.7 E-value = FT 2.3e-68" FT CDS 134872..135096 FT /transl_table=11 FT /locus_tag="TW420" FT /product="hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83HS9" FT /protein_id="CAD67090.1" FT /translation="MSVKTVITRNPCPESSATMKIFRIRIVPRFAEAPTPAEYVIVVAA FT GVRSEQPAEANVQITKMATRIISRIFNGR" FT CDS 135221..135703 FT /transl_table=11 FT /locus_tag="TW421" FT /product="putative CarD-family transcriptional regulator" FT /note="Similar to Streptomyces coelicolor putative FT transcriptional factor regulator SCO4232 or SCD8A.05 FT SWALL:Q9L0Q9 (EMBL:AL160331) (160 aa) fasta scores: E(): FT 4.3e-32, 66.03% id in 159 aa, and to Myxococcus xanthus FT CarD protein SWALL:Q50887 (EMBL:Z56280) (316 aa) fasta FT scores: E(): 1.1e-09, 28.48% id in 158 aa" FT /db_xref="GOA:Q83NK4" FT /db_xref="InterPro:IPR003711" FT /db_xref="UniProtKB/TrEMBL:Q83NK4" FT /protein_id="CAD67091.1" FT /translation="MQFKVGQTVVYPHHGTASILEIKKRVIRGEEVTYLKLHVSDGDLM FT IEVPAEKIEAVGLRGVIDSDGARRVVEVLRENLVDEPTNWSRRYKSNLEKIASGDVTKV FT TEVVRDLSRREKTRVLSAGEKRMLTRARGILVAELALARHTNQEDAEALLDEVLAE" FT misc_feature 135224..135680 FT /note="CarD-like transcriptional regulator Score = 192.9 FT E-value = 3.6e-55" FT CDS 135710..136978 FT /transl_table=11 FT /locus_tag="TW422" FT /product="putative terpenoid biosynthesis bifunctional FT enzyme" FT /note="Fusion protein. N-terminal region similar to FT Streptomyces coelicolor 2-c-methyl-D-erythritol 4-phosphate FT cytidylyltransferase IspD or SCO4233 or SCD8A.06 FT SWALL:ISPD_STRCO (SWALL:Q9L0Q8) (270 aa) fasta scores: E(): FT 1.5e-12, 36.05% id in 233 aa Full length similarity to FT Rhizobium meliloti IspD/IspF bifunctional enzyme [includes: FT 2-c-methyl-D-erythritol 4- phosphate cytidylyltransferase FT ispdf or r01456 or smc01040 SWALL:ISDF_RHIME (SWALL:Q92Q90) FT (434 aa) fasta scores: E(): 5.7e-11, 28.7% id in 425 aa. FT C-terminal region similar to Escherichia coli FT 2-c-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF FT or MecS or b2746 or z4054 or ecs3600 SWALL:ISPF_ECOLI FT (SWALL:P36663) (159 aa) fasta scores: E(): 3.9e-10, 35.52% FT id in 152 aa" FT /db_xref="GOA:Q83NK3" FT /db_xref="InterPro:IPR001228" FT /db_xref="InterPro:IPR003526" FT /db_xref="InterPro:IPR020555" FT /db_xref="UniProtKB/Swiss-Prot:Q83NK3" FT /protein_id="CAD67092.1" FT /translation="MAVGLLLLAAGVGSRLSSSLPKAFVSVGGLDLIQWCLKNLGQLRT FT ALEVVVTVPKGFVELCERNVLQSLGTLEKIKIVTGGATRQDSVGLGIRYFSARITKLLV FT HDVARAFTPPEIYLSVIKQLETSKAVIPVIAIVDSIKKVNMQDAYREVARGPGEPFHTK FT SVLHLDRREFFSAQTPQGFDRALLEAAHERSVASNEQFADDSVMVAQIEKDITLINGHE FT ASFKVTNPCDLQRAEFAASSLLSKSNVSPVNISQPPISALSMPLPLIGVGIDFHKFILD FT ESPLFLACLEWKNYRRLQGHSDGDVVAHACTTALLSAANMGDIGSVFGVDLAATKDASG FT AYFLESTNRLLATNGFCVLNIAVQVISNTPRLADRRVEAEHAISDCLSGARISLSSVTT FT DGMGFLGRGEGIGAIAVAQIYHR" FT misc_feature 135710..135784 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.925) with cleavage FT site probability 0.894 between residues 25 and 26" FT misc_feature 135716..136433 FT /note="Uncharacterized protein family UPF0007 Score = 103.3 FT E-value = 3.4e-28" FT misc_feature 136508..136973 FT /note="YgbB family Score = 130.0 E-value = 3.2e-36" FT CDS 137063..138463 FT /transl_table=11 FT /gene="cysS1" FT /locus_tag="TW423" FT /product="cysteinyl-tRNA synthetase" FT /EC_number="6.1.1.16" FT /note="Similar to Escherichia coli cysteinyl-tRNA FT synthetase CysS or b0526 SWALL:SYC_ECOLI (SWALL:P21888) FT (461 aa) fasta scores: E(): 7.6e-57, 38.75% id in 467 aa" FT /db_xref="GOA:Q83HS8" FT /db_xref="InterPro:IPR002308" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015273" FT /db_xref="InterPro:IPR015803" FT /db_xref="InterPro:IPR015804" FT /db_xref="UniProtKB/Swiss-Prot:Q83HS8" FT /protein_id="CAD67093.1" FT /translation="MTLNLYDTLSRRIVTLDCRDRVELYVCGPTVQSPPHIGHMRSGVV FT YDCLRRWLEYKGLPVLYVRNITDIDDKILASARSTETGETWWQIAYRVSGLFNEAYKAL FT FVKPPDYEPLVTAHIPDIIKAIEILIQKNVAYRAMDGSGNVFFSIDKHPSYGELTDQKD FT LLIDDCITPGKRDPRDFTLWKEKKDTDPDLAFWESPWGPGRPGWHIECSVMATKYLGTR FT FAIHGGGVDLRFPHHENELAQARALGAHFADIWMHTGAVNVEGIKMSKSFGNSVLVQDA FT LSKVSPSALRYYFLTAHYRSTLNYTENSLSQACNTWNKLQGCIYRVYDYLEREGYENDF FT CVSQLNTDFSTSLDNDLNIPEALAIVHNKVREMNRLVDTQADMQYLGNTLSEVVEMLSI FT LCPIDHKITYTSGAQDNSKALLQVLLEARDRARSKGDFYTSDLLRELLAEADISVSDGH FT VSYGSPRG" FT misc_feature 137126..138416 FT /note="tRNA synthetases class I (C) Score = 452.2 E-value = FT 3.2e-133" FT CDS 138460..139251 FT /transl_table=11 FT /locus_tag="TW424" FT /product="putative rRNA methyltransferase" FT /note="Similar to Mycobacterium leprae putative FT methyltransferase Ml0324 SWALL:Q9CCW4 (EMBL:AL583918) (278 FT aa) fasta scores: E(): 2.3e-30, 41.29% id in 247 aa, and to FT Bacillus subtilis hypothetical tRNA/rRNA methyltransferase FT YacO SWALL:YACO_BACSU (SWALL:Q06753) (249 aa) fasta scores: FT E(): 2.1e-23, 33.19% id in 244 aa" FT /db_xref="GOA:Q83HS7" FT /db_xref="HSSP:1GZ0" FT /db_xref="InterPro:IPR001537" FT /db_xref="InterPro:IPR004441" FT /db_xref="InterPro:IPR013123" FT /db_xref="UniProtKB/TrEMBL:Q83HS7" FT /protein_id="CAD67094.1" FT /translation="MRRKNRSVSSSSRRSGLPNQIEHNTIVGINPVYEALRERVPSIKL FT LIDKSFALKHNPRVSKIMNYSDIPHIFVPRSTLDRLTDLPHQGVALLCKSYRPSRAEEL FT LKQTWPRPPLFIACDQVTDPRNLGAIVRSAAAFRASAVLIGKNRSARVTPMVWKASAGA FT VGKLPIAEVGNLTRYIVRFREYGGFVLGLDSNSKTPIDKSVFLKKEDKRALLLIVGSEG FT SGISHLVKKHCDELLTIPTDASVDSLNVSVAVSIALYELQR" FT misc_feature 138796..139234 FT /note="SpoU rRNA Methylase family Score = 136.3 E-value = FT 4e-38" FT CDS 139366..140247 FT /transl_table=11 FT /locus_tag="TW425" FT /product="putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv2969c or mt3047 or mtcy349.18 SWALL:O33272 FT (EMBL:Z83018) (261 aa) fasta scores: E(): 8.8e-05, 29.31% FT id in 249 aa" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:Q83NK2" FT /protein_id="CAD67095.1" FT /translation="MDLTKRERRDRAREKARHIRDQQVKSERRARWFIQGGVLLAIFAV FT VSAVVLVIVFSVPSQAAGPRNMVSDGIVFGPKGEPILTEGIHPEFGPTPYYESAENGKI FT NIRVYADYSCHYCKQFEETTSAYLSSLLDGGNATLSIHPIAIFGSGLNRYSVRATNAVA FT CVANYSPKYFLSVNAALFQHQESALQNRGLGNDELWTIASASGASDPKVEECIKHEMFS FT DWAVAATERATRYILPNSDNVSLRGTPTVLVNGALYTGSPGDLDSFKRFIAESQGKTFS FT TKPPSHTGARNT" FT misc_feature 139366..139548 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.999) with cleavage FT site probability 0.996 between residues 61 and 62" FT misc_feature 139459..139527 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 32-54" FT tRNA 140292..140364 FT /note="tRNA Thr anticodon TGT, Cove score 83.11" FT CDS 140516..140956 FT /transl_table=11 FT /locus_tag="TW426" FT /product="putative integral membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q83NK1" FT /protein_id="CAD67096.1" FT /translation="MTDKLLSSKDFIEINGSSFFNSSILLTLLVLSLLSRLFKLFLARI FT LLFSIAVLMPLLFVFTKHLFYAKLSESFGISGETSLENILSTASIIPQIPLLLSIVAYT FT AYLLCFSVAIFLKKKNRHSSNNEEKLQNKYIWDSLSRGVDPT" FT misc_feature order(140573..140629,140648..140716,140795..140863) FT /note="3 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 20-38, 45-67 and 94-116" FT CDS complement(141159..142622) FT /transl_table=11 FT /gene="zwf" FT /locus_tag="TW428" FT /product="glucose-6-phosphate 1-dehydrogenase" FT /EC_number="1.1.1.49" FT /note="Similar to Actinobacillus actinomycetemcomitans FT glucose-6-phosphate 1-dehydrogenase Zwf SWALL:G6PD_ACTAC FT (SWALL:P77809) (494 aa) fasta scores: E(): 8e-67, 37.96% id FT in 482 aa, and to Homo sapiens glucose-6-phosphate FT dehydrogenase G6pD SWALL:Q96PQ2 (EMBL:AF277315) (515 aa) FT fasta scores: E(): 2.2e-58, 36.67% id in 469 aa" FT /db_xref="GOA:Q83HS6" FT /db_xref="HSSP:1QKI" FT /db_xref="InterPro:IPR001282" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR019796" FT /db_xref="UniProtKB/TrEMBL:Q83HS6" FT /protein_id="CAD67097.1" FT /translation="MPKVNCATQQIALPGALAIFGATGDLSSKKLLPAVYDLFHNSLLS FT NGFVLIALNRDFSAQDFICHFRHCVKSFSRTGWSESVFLDLQKRVHHVSGDFSDPETYI FT ELSEKLETTKEETGGNCVFYLSVPPNVFTPIMKNLSASGLSRGCLHKIAVEKPFGNDLK FT SAIQLNSVLRSAFPERAIFRVDHYLGKETIQNILTFRFGNQIFDPIWNRKHVDHVQITM FT SEDIGVEGRSKYYDGIGAARDVLQNHLLQLMALITMERPSNLNNASDIRHEKQRVLECV FT SLPKNIAQNAVRGQYSSGYLRDERVVSFLQEDGVNPSSRTETFAAIKLNADNERWYGVP FT FYVRTGKRMAKRSAYISLVFKPTDMSILQNVIVIRLQPDEGVSIWFASKVPGYRSDIRQ FT VNFDFSYKSSFTESSPEAYERLILDAMRGEASLFPQQREVELCWGIIDPLEEVWENDNT FT LIPQYTPGSWGPDTSNDLLLRTSRHWRNY" FT misc_feature complement(141164..142034) FT /note="Glucose-6-phosphate dehydrogenase, C-terminal domain FT Score = 417.0 E-value = 1.3e-122" FT misc_feature complement(142040..142595) FT /note="Glucose-6-phosphate dehydrogenase, NAD binding FT domain Score = 128.8 E-value = 6.9e-36" FT misc_feature complement(142050..142070) FT /note="PS00069 Glucose-6-phosphate dehydrogenase active FT site." FT CDS complement(142665..144308) FT /transl_table=11 FT /gene="pgi" FT /gene_synonym="slr1349" FT /locus_tag="TW429" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="Similar to Synechocystis sp. glucose-6-phosphate FT isomerase pgi or slr1349 SWALL:G6PI_SYNY3 (SWALL:P52983) FT (531 aa) fasta scores: E(): 4.8e-07, 26.91% id in 353 aa" FT /db_xref="GOA:Q83HS5" FT /db_xref="InterPro:IPR001672" FT /db_xref="UniProtKB/TrEMBL:Q83HS5" FT /protein_id="CAD67098.1" FT /translation="MLRDLSRSWVVLEVLSSEKEKIRCILDTLVDKKIASRISAKDCSV FT WVESAREEASRRLGWLDVYDHSLPVAQSAKALRNDLLKNGVDRFVLSGMGGSSLASELM FT SDYFQTSLIVLDTTDPDHVFRVASEPLDRTSLILSSKSGSTLEVDSHRRLFEKHFKGSG FT IDPSSRIICITDPNSPLDLLAQEKGYRVFNADPSVGGRFSALTAFGIVPLVLCGIDVTP FT ILSAAKRALVALKEDSQANPALILGALLAVEGKAAIASESLIGNWIEQLLAESTGKDLT FT GVLPIVTNGDLSKVRLEGVSYFDVRLEDGSRNSSENSSEKSIQSETECADKEFCARITA FT GLGEQFVLWEFATAVLGHILSINPFDQPDVEKAKEATRGILGNFKKPEDEPVISLQNGI FT KTLGGACTQNLGELLDTLGRAIPPSGYLAIQAYLDPKNDDGVMDLVKYMVLRYNRPVTF FT GWGPRFLHSTGQYHKGGPRIGSFLQLVTDSDRCLEIPGLGFDFGKLIRSQAAGDAQVLR FT SIGRPVLTLFVNSLEDLTLNLPGLEPSLSN" FT misc_feature complement(143102..144299) FT /note="Phosphoglucose isomerase Score = -117.8 E-value = FT 6.2e-08" FT CDS complement(144325..145419) FT /transl_table=11 FT /gene="tal" FT /locus_tag="TW430" FT /product="transaldolase" FT /EC_number="2.2.1.2" FT /note="Similar to Mycobacterium tuberculosis transaldolase FT Tal or Rv1448c or mt1495 or mtcy493.06 SWALL:TAL_MYCTU FT (SWALL:O06812) (373 aa) fasta scores: E(): 2.6e-72, 54.14% FT id in 362 aa, and to Solanum tuberosum transaldolase FT pottal1 SWALL:O04894 (EMBL:U95923) (438 aa) fasta scores: FT E(): 5.1e-49, 44.22% id in 355 aa" FT /db_xref="GOA:Q83HS4" FT /db_xref="InterPro:IPR001585" FT /db_xref="InterPro:IPR004732" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR014634" FT /db_xref="InterPro:IPR018225" FT /db_xref="UniProtKB/TrEMBL:Q83HS4" FT /protein_id="CAD67099.1" FT /translation="MVNSLQKLSTAGVSVWLDDLSRSRITDGDLKKRIEKQCVVGVTTN FT PSIFAKSIASSRDYDSSFKNAFSRGCTLDEAVLSVISEDVSGALDLLADSYSASKGIDG FT RVSIEVDPTLAYDTEGTFRSVKSIWESINKPNLYVKIPATREGLEAISQSIASGVCVNV FT TLIFSLQRYREVIDAYLTGLERAVEAGRSIENIFSVASFFVSRFDVYVDEQLDNIGTPQ FT ALHLKGRAAVANARLAYEVYEEAFATPRYKILADKGANKQRPLWASTGVKNPRYPDTCY FT VTNLVARDVVNTMPEATLDAVNDHGEIRGDTITGTYEDSRAILSELAELGVNYTEVTDK FT LEADGVKQFIDSWNQLKSNVRSRF" FT misc_feature complement(144342..145380) FT /note="Transaldolase Score = 289.2 E-value = 3.7e-84" FT misc_feature complement(145273..145299) FT /note="PS01054 Transaldolase signature 1." FT CDS complement(145409..147505) FT /transl_table=11 FT /gene="tkt" FT /locus_tag="TW431" FT /product="transketolase" FT /EC_number="2.2.1.1" FT /note="Similar to Mycobacterium tuberculosis transketolase FT Tkt or Rv1449c or mt1496 or mtcy493.05 SWALL:TKT_MYCTU FT (SWALL:O06811) (700 aa) fasta scores: E(): 4.7e-157, 59.42% FT id in 690 aa, and to Saccharomyces cerevisiae transketolase FT 1 Tkl1 or ypr074c or yp9499.29C SWALL:TKT1_YEAST FT (SWALL:P23254) (679 aa) fasta scores: E(): 1.2e-97, 43.34% FT id in 676 aa" FT /db_xref="GOA:Q83HS3" FT /db_xref="HSSP:1QGD" FT /db_xref="InterPro:IPR005474" FT /db_xref="InterPro:IPR005475" FT /db_xref="InterPro:IPR005476" FT /db_xref="InterPro:IPR005478" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR015941" FT /db_xref="UniProtKB/TrEMBL:Q83HS3" FT /protein_id="CAD67100.1" FT /translation="MEYNVSRERRASALTVFVWDDKDDLAVNTARVLAADAVENVGNGH FT PGTAISLAPAAYLLFQKVMRHNPSDPSWAARDRFVLSCGHSSLTLYIQLFLAGYKLSLQ FT DLRGLRQWGSLTPGHPEYGHTPGVEITTGPLGQGLASAVGFAYSARFQRGLFKTDIFDH FT YVYVIASEGDIEEGVTSEACSLAGLQQLGNLLVILDRNYISIEDNTDIALSEDIKSRYL FT SYGWQVIEVPWRRAGAEYREDVLSLYEALLEAQKDTDRPSLIILETVIAWPSPGKQNTG FT AAHGAALGVNEVKDLKRILGFDPEKTFEVPDGVLQHTKGALDRGQSQQDNWENVFSSWR FT QEHPIEAALFDRLQNGVTPDIDHVLPVFSSEKPISTRAASGQVINRIAEVMPELWGGSA FT DLAESNNTTIKSANSFLPESVTVDHWKSDRYGRILHFGVREHAMAAIINGIVLHGNTRV FT FGGTFLVFSDYMRPAVRLAALMKIPSIFVWTHDSIGLGEDGPTHQPVEHLWALRAIPGL FT SVIRPADANEVAWAWKEILERRDGPVGLVLSRQNLPVLDRTCLAPASELRKGAYILADG FT SRYPRLILIATGSEVSLAIGAREVLENRGIPTRVVSAPCLEWFDQQEKSYRNHVLPPDV FT ETRISVEAGLSLGWSKYIGDKGASVSIEHYGASAAGDVLFERFGFTVENIVKTADALLG FT GCGE" FT misc_feature complement(145453..145798) FT /note="Transketolase, C-terminal domain Score = 14.2 FT E-value = 5.4e-05" FT misc_feature complement(145846..146389) FT /note="Transketolase, pyridine binding domain Score = 233.3 FT E-value = 2.5e-67" FT misc_feature complement(146431..147442) FT /note="Transketolase, thiamine diphosphate binding domain FT Score = 544.9 E-value = 3.9e-161" FT misc_feature complement(147353..147415) FT /note="PS00801 Transketolase signature 1." FT CDS 147644..148546 FT /transl_table=11 FT /locus_tag="TW432" FT /product="putative cytochrome synthase" FT /note="Similar to Streptomyces coelicolor putative FT cytochrome oxidase assembly factor SCO1934 or SCC22.16c FT SWALL:Q9XAC2 (EMBL:AL096839) (340 aa) fasta scores: E(): FT 5.1e-53, 48.11% id in 291 aa, and to Bradyrhizobium FT japonicum putative heme O synthase CoxE SWALL:Q9RM98 FT (EMBL:AJ242592) (314 aa) fasta scores: E(): 8.3e-35, 37.01% FT id in 281 aa. Note considerable overlap with downstream FT converging CDS." FT /db_xref="GOA:Q83NK0" FT /db_xref="InterPro:IPR000537" FT /db_xref="InterPro:IPR006369" FT /db_xref="UniProtKB/Swiss-Prot:Q83NK0" FT /protein_id="CAD67101.1" FT /translation="MGMQGRSFARQIRAYVSLTKPRVVELLLLTTVPTMILAQRGVPNP FT LSVLSVLLGGAMSAGAAGAFNCYIDRDIDSKMSRTRNRPLVTGALSPKASLIFAWMLCV FT ISVLWFLLFVNWLSALLSAIAVFLYAFFYSIVLKKRTPQNIVWGGLAGCMPVLIAWAAV FT TGSIDWPAIVLFAVVFLWTPPHYWPLSIHYSEDYRLTSIPMLGAIFPRKLVVLQVLLYA FT FAVVACTLLLIPVAHMTPLYGLFSAVLGAWFVYEIYRLYVRVVRGHEIKAMHIFSLSNT FT YLSLVFLSVGIDGVVSQLL" FT misc_feature 147644..147826 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.934) with cleavage FT site probability 0.599 between residues 61 and 62" FT misc_feature order(147704..147772,147782..147850,147911..147979, FT 147989..148057,148076..148144,148154..148222, FT 148280..148348,148361..148429,148466..148534) FT /note="9 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 21-43, 47-69, 90-112, FT 116-138, 145-167, 171-193, 213-235, 240-262 and 275-297" FT misc_feature 147713..148523 FT /note="UbiA prenyltransferase family Score = 210.5 E-value FT = 1.8e-60" FT misc_feature 147839..147907 FT /note="PS00943 UbiA prenyltransferase family signature." FT CDS complement(148470..149525) FT /transl_table=11 FT /locus_tag="TW433" FT /product="putative cytochrome synthase" FT /note="Similar to Bacillus stearothermophilus heme O FT oxygenase CtaA SWALL:P94346 (EMBL:D70843) (320 aa) fasta FT scores: E(): 0.00037, 26.71% id in 146 aa, and to Bacillus FT subtilis cytochrome aa3 controlling protein CtaA FT SWALL:CTAA_BACSU (SWALL:P12946) (306 aa) fasta scores: E(): FT 0.031, 20.94% id in 296 aa" FT /db_xref="GOA:Q83NJ9" FT /db_xref="InterPro:IPR003780" FT /db_xref="UniProtKB/TrEMBL:Q83NJ9" FT /protein_id="CAD67102.1" FT /translation="MHIWQLITLQALSHNPVIWFCCMVSKTGNYFPGLRNGLIPGVTVR FT IRVFLIVNALSQFFILFTGNIVRVSKSGLGCPSWPACSEKSLIAAPGYGIHGYIEFGNR FT LVALAVAVISLITLVAVWKLRKTHSTIFYLTLLSALGVPLQALIGGISVLTKLNPYVVG FT LHTLVSILLISDTCLAVFVTYTRRKIDCYPAAYRFLSVFTILFACFVFVLGILTTGNLK FT HSGDPAAVRNSLTLAPLLHGVSAVILFFLVLTVFVFSMKAGFGTKRASACLLLLLFVQI FT AIGLVQVHTNLPEYLVASHLMLAGLLAAALTFFAQQYRSSTSRKVPREAEKQHRLFQPI FT GRQAKDKYSIS" FT misc_feature complement(148571..149414) FT /note="Cytochrome oxidase assembly protein Score = -15.1 FT E-value = 5.3e-06" FT misc_feature complement(order(148581..148640,148653..148712, FT 148749..148817,148875..148943,148977..149045, FT 149073..149141,149160..149213,149316..149384)) FT /note="8 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 48-70, 105-122, 129-151, FT 161-183, 195-217, 237-259, 272-291 and 296-315" FT CDS 149664..151085 FT /transl_table=11 FT /locus_tag="TW434" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO1925 or scc22.07C SWALL:Q9XAD1 (EMBL:AL096839) FT (473 aa) fasta scores: E(): 3.4e-141, 74.13% id in 464 aa, FT and to Escherichia coli SufB protein or b1683 FT SWALL:SUFB_ECOLI (SWALL:P77522) (495 aa) fasta scores: E(): FT 3.1e-61, 38.7% id in 478 aa" FT /db_xref="GOA:Q83HS2" FT /db_xref="InterPro:IPR000825" FT /db_xref="InterPro:IPR010231" FT /db_xref="UniProtKB/TrEMBL:Q83HS2" FT /protein_id="CAD67103.1" FT /translation="MSENLIANRPDLDSLGKYEYGWHDSDRAGSDARRGLSRDVVEEIS FT ETKGEPDWMRSMRLRALEIFYRKPMPNWGADLTGIDFDQIKYFVRSTERQANSWEDLPE FT EIRNTYERLGIPDAERQRLVAGVAAQYESEVVYHQINAELERQGVVFLDTDTALKEHPD FT ILRKYFGSVIPAGDNKFAALNTAVWSGGSFVYVPEGVKVEIPLQAYFRINTENMGQFER FT TLIIADKNSYVHYVEGCTAPIYSSHSLHSAVVEILVKEGARVRYTTVQNWSTNVYNLVT FT KRAYVSKNSTMEWIDGNIGSKVTMKYPSVYLADEGAKGEILSVAFAGPGQYQDAGAKAI FT HIAPRTKSAIVSKSIARGGGRTAYRGEVRVEEGAKDSANSVRCDALLVDTISRSDTYPA FT IDIRRDDAQLAHEATVSKVNEDQLFYLMSRGLEEAESVAMIVRGFIDPIVRELPMEYAM FT ELNKLIEMSMEGAVG" FT misc_feature 150246..151005 FT /note="Uncharacterized protein family (UPF0051) Score = FT 450.0 E-value = 1.4e-132" FT CDS 151078..152226 FT /transl_table=11 FT /locus_tag="TW435" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO1924 or SCC22.06c SWALL:Q9XAD2 (EMBL:AL096839) FT (394 aa) fasta scores: E(): 1.5e-45, 37.46% id in 379 aa" FT /db_xref="GOA:Q83HS1" FT /db_xref="InterPro:IPR000825" FT /db_xref="UniProtKB/TrEMBL:Q83HS1" FT /protein_id="CAD67104.1" FT /translation="MASQSPTQTRSERFCSENPSDFPEPSNRDLAWKYAPIPIVENFLS FT KDFYPYEYHISLAGSDAGNVKPAIDRPIFRWSTKENVALGRAGLPEDRTSAFAWQRTQR FT VLLVDLEGAESIILDRRFERCTVAHTIIHVKAHADAKLFINNHGYDGLIENLEIILEDN FT AILQLISCQDWDEASVHLAYHFVYFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVE FT SLGIYFAQNKQHFEHQVYVHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSD FT SYEQNRNLMIGSGTRADSVPNLEIKNGNILGAGHASATMRFDDEHLFYLQSRGIDKNQA FT LRMVVSGFVHGMLQKSDIGCGGDVLLRLFSKKLDALVSCIGD" FT misc_feature 151387..152131 FT /note="Uncharacterized protein family (UPF0051) Score = FT 148.0 E-value = 1.2e-41" FT CDS 152251..152553 FT /transl_table=11 FT /locus_tag="TW436" FT /product="putative dioxygenase 2Fe-2S ferredoxin subunit" FT /note="Similar to Escherichia coli 3-phenylpropionate FT dioxygenase ferredoxin subunit HcaC or PhdB or HcaA3 or FT b2540 or z3811 or ecs3406 SWALL:HCAC_ECOLI (SWALL:P77266) FT (106 aa) fasta scores: E(): 3.4e-14, 45.91% id in 98 aa, FT and to Pseudomonas putida benzene 1,2-dioxygenase system FT ferredoxin component BedB SWALL:BEDB_PSEPU (SWALL:Q07947) FT (107 aa) fasta scores: E(): 7.7e-11, 39.78% id in 93 aa" FT /db_xref="GOA:Q83HS0" FT /db_xref="HSSP:1FQT" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/TrEMBL:Q83HS0" FT /protein_id="CAD67105.1" FT /translation="MKVCPVSDLTENQPARFEVDGVSVALVKLSDGSVYAVNDCCTHAD FT VPLSEGFVDGETIECWAHGAKFCLKSGEALTLPASTPVATYKVVLQNGFVFIDLP" FT misc_feature 152251..152527 FT /note="Rieske [2Fe-2S] domain Score = 65.5 E-value = FT 8.2e-17" FT CDS 152687..153436 FT /transl_table=11 FT /locus_tag="TW437" FT /product="putative ABC transporter ATP-binding subunit" FT /note="Similar to Streptomyces coelicolor putative ABC FT transporter ATP-binding subunit SCO1922 or SCC22.04c FT SWALL:Q9XAD4 (EMBL:AL096839) (254 aa) fasta scores: E(): FT 2.5e-55, 70.04% id in 247 aa, and to Cyanidium caldarium FT probable ATP-dependent transporter Ycf16 or Ycf33 FT SWALL:ABCX_CYACA (SWALL:Q9TLX1) (254 aa) fasta scores: E(): FT 8e-32, 48.19% id in 249 aa" FT /db_xref="GOA:Q83HR9" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR010230" FT /db_xref="UniProtKB/TrEMBL:Q83HR9" FT /protein_id="CAD67106.1" FT /translation="MSVLEIRDLCVTIVDDSVKKEILKGVCLKIKSGEKHAIMGPNGSG FT KSTLASVIAGHPRYTVTSGSITLDNKDVLQMSVDERARAGIFLAMQYPMEITGVSVGNF FT LRTAKAALDQKQPQIRQWIETVRGAMDRLQIERAFLERNVNEGFSGGEKKRHEILQLEL FT FKPLFAILDETDSGLDIDALRVVSEGVNRAHSENNMGILLITHYTRILRYIKPDFVHIF FT VNGRIVEEGGEGLADRLEKEGYNAYVS" FT misc_feature 152783..153359 FT /note="ABC transporter Score = 101.6 E-value = 1.1e-27" FT misc_feature 152804..152827 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 153461..153811 FT /transl_table=11 FT /locus_tag="TW438" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv1466 or mtv007.13 or mt1513 SWALL:O53157 FT (EMBL:AL021184) (115 aa) fasta scores: E(): 3.6e-18, 52.52% FT id in 99 aa" FT /db_xref="InterPro:IPR002744" FT /db_xref="UniProtKB/TrEMBL:Q83HR8" FT /protein_id="CAD67107.1" FT /translation="MNTCADDPLGLGRRPDVCEGALEALKDVIDPELGVNIVDLGLVYG FT VSLDEAGVLSVRITLTNPGCPLADVIEEQIAYSLQSVCDSYRLEWVWFPPWTPERISHD FT GREMMRALGFAL" FT misc_feature 153509..153728 FT /note="Domain of unknown function DUF59 Score = 85.9 FT E-value = 5.7e-23" FT CDS complement(153896..154753) FT /transl_table=11 FT /locus_tag="TW439" FT /product="putative membrane protein" FT /note="Weakly similar to Streptomyces coelicolor putative FT membrane protein SCO1829 or SCI8.14 SWALL:Q9RJ39 FT (EMBL:AL132644) (290 aa) fasta scores: E(): 5.4e-10, 27.75% FT id in 263 aa" FT /db_xref="InterPro:IPR002994" FT /db_xref="UniProtKB/TrEMBL:Q83NJ8" FT /protein_id="CAD67108.1" FT /translation="MLLVLNHLPVKPILKARKKNFLGYFALVCIFAIVCVMLAFWQYTR FT AENAMFENQALERNLMAPIKPVENIEKENPEWRLVEARGRYLYEKQLLLRNTWFRSDVG FT FGVLTPLRLSDGKILIVKRGWIKNAQQATPKVYDKQPEQHMILRLQKPVFQDARINNGQ FT INRLNLSVIKSYINSDVITDFYAVPNAINKNSPVYRNTGETDSLYPGSSEMVLPIEAIF FT PAKNVGMHWSYAFQWVVFAVAAFLAFFYCARKDVRARKSYVKNKIFSRRKRITDEEYED FT LLEG" FT misc_feature complement(order(153998..154066,154625..154693)) FT /note="2 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 21-43 and 230-252" FT misc_feature complement(154616..154753) FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.899) with cleavage FT site probability 0.455 between residues 46 and 47" FT tRNA 155104..155177 FT /note="tRNA Met anticodon CAT, Cove score 85.31" FT CDS complement(155180..155956) FT /transl_table=11 FT /gene="uppS1" FT /locus_tag="TW440" FT /product="undecaprenyl pyrophosphate synthetase" FT /EC_number="2.5.1.31" FT /note="Similar to Micrococcus luteus undecaprenyl FT pyrophosphate synthetase UppS SWALL:UPPS_MICLU FT (SWALL:O82827) (249 aa) fasta scores: E(): 1.8e-23, 33.47% FT id in 239 aa, and to Mycobacterium leprae possible FT undecaprenyl pyrophosphate synthetase ml2467 SWALL:Q9CB36 FT (EMBL:AL583925) (262 aa) fasta scores: E(): 9e-36, 43.24% FT id in 259 aa" FT /db_xref="GOA:Q83HR7" FT /db_xref="InterPro:IPR001441" FT /db_xref="InterPro:IPR018520" FT /db_xref="UniProtKB/Swiss-Prot:Q83HR7" FT /protein_id="CAD67109.1" FT /translation="MGGKMLRSVSELIYKVYARYLLGQINLNNLPGHVALIVDGNRRWA FT RKEKRDRISDGHRAGAGKAVDFLHWCDELDINIVTLYLLSNDNLKNRNRQELNDLVQVI FT CNLIAQVSKRWKVNHVGSCENLPELLGNSLEGVKSSTKTNRYSERSMTVNLAIGYSGRA FT EITEAVRKIVNTYPIGDLPEKITEEVISANLYTGGLSDPDLIIRTSGEQRLSDFMPWQS FT THSEFYFLEALGPDLRKVDFLRAIRDFSIRRRSFGA" FT misc_feature complement(155185..155848) FT /note="Putative undecaprenyl diphosphate synthase Score = FT 189.7 E-value = 3.4e-54" FT misc_feature complement(155297..155350) FT /note="PS01066 Undecaprenyl pyrophosphate synthetase family FT signature." FT CDS 156076..157632 FT /transl_table=11 FT /locus_tag="TW441" FT /product="putative sugar ABC transporter ATP-binding FT subunit" FT /note="Similar to Bacillus stearothermophilus L-arabinose FT transport ATP-binding protein AraG SWALL:ARAG_BACST FT (SWALL:Q9S472) (513 aa) fasta scores: E(): 5e-88, 55.07% id FT in 512 aa, and to Escherichia coli D-allose transport FT ATP-binding protein AlsA or b4087 SWALL:ALSA_ECOLI FT (SWALL:P32721) (510 aa) fasta scores: E(): 3.8e-48, 36.54% FT id in 509 aa" FT /db_xref="GOA:Q83HR6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q83HR6" FT /protein_id="CAD67110.1" FT /translation="MRESEGVMLQMTGITKSFSGVKVLEDISFSLRKGEVHAICGENGT FT GKSTLMKILSGVIPDGSYDGEIILENKKRRFKNLAASQAAGVVMIHQELTLIPEMSIAE FT NIFLGNEQRYSGPFSGQIDFTKTRTKAVELMKLVHLTESPDTLIKDLGVGKQQLVEICK FT ALGKNAKILVFDEPTAVLNESDSEHLLNLMKKFKTQGLSSIMISHKLNEVKNVADTVTV FT LRDGKKIDTIPADATTEDDIIRKMAGRSLSTRFPELSPSIGKGAWQIKDWTVIHPIRRE FT IYVSNNISLTVHDGEIVGLAGLVGAGRTELARSIFGRQFGIYTSGKICRNNKELKINKV FT SQAIGNHIAYVTEDRKSFGFNQFDDVKNTIASASLKQFLGKHHFLDDGKLHTVAEDYRK FT KLKIKTASVAAPITSLSGGNQQKVILAKWICTGPDFLILDEPTRGIDVAAKYEIYSIIG FT ELAASGKSILFISSELPELLGMTNRIYTLFEGKVTGEFKTSEASQELLMRYMTSYGNNE FT N" FT misc_feature 156175..156751 FT /note="ABC transporter Score = 154.1 E-value = 1.7e-43" FT misc_feature 156196..156219 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 156958..157543 FT /note="ABC transporter Score = 68.9 E-value = 7.5e-18" FT misc_feature 157318..157362 FT /note="PS00211 ABC transporters family signature." FT CDS 157622..158845 FT /transl_table=11 FT /locus_tag="TW442" FT /product="putative sugar ABC transporter permease subunit" FT /note="Similar to Bacillus stearothermophilus L-arabinose FT membrane permease AraH SWALL:Q9S471 (EMBL:AF160811) (407 FT aa) fasta scores: E(): 3.6e-55, 42.32% id in 378 aa, and to FT Bacillus subtilis ribose transport system permease protein FT RbsC SWALL:RBSC_BACSU (SWALL:P36948) (322 aa) fasta scores: FT E(): 2.6e-15, 29.34% id in 368 aa" FT /db_xref="GOA:Q83NJ7" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q83NJ7" FT /protein_id="CAD67111.1" FT /translation="MKIKLFSSRNFGILVAAVAVALFFQVASGGRMLTSDNVLNIVNGN FT SHIFILSIGMVLVIVSGNIDLSVGSVAAFVGIVVAVATDSFHLSAWQAIILGLLIGLVV FT GCWQAFWVAFVGIPAFIATLAGMLTFRGLNQLVGNSRSVPVPDDFTYFGAGYLPDIFTN FT TAFNVPTVILGFVVFLLLVIMQILRRRNRKLLGIQQENIPVFLLRIAIYGLAVAYLTYL FT FATGHPGTSFPIPGLIFVVIAFIYVFISERTILGRHIYAVGGNRNAAILSGVSVKRVNF FT FVMANMSILASIAGMMFVGRSGGSGPSDGVGWELDAIAAVFVGGAAVSGGVGTVIGACL FT GGVVVALLSNGLLIMGISADIAAIIKGLVLLAAVSFDVVSKNREKPSIIRLFVRRSGLS FT RDKAGGRG" FT misc_feature 157622..157699 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.999) with cleavage FT site probability 0.414 between residues 26 and 27" FT misc_feature order(157634..157702,157730..157798,157817..157870, FT 157883..157942,157946..158014,158102..158170, FT 158231..158299,158312..158371,158456..158515, FT 158573..158641,158675..158743) FT /note="11 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 5-27, 37-59, 66-83, 88-107, FT 109-131, 161-183, 204-226, 231-250, 279-298, 318-340 and FT 352-374" FT CDS 158886..159956 FT /transl_table=11 FT /locus_tag="TW443" FT /product="putative sugar ABC transporter substrate-binding FT lipoprotein subunit" FT /note="Similar to Agrobacterium tumefaciens multiple FT sugar-binding periplasmic receptor ChvE precursor or FT atu2348 or agr_c_4267 SWALL:CHVE_AGRT5 (SWALL:P25548) (354 FT aa) fasta scores: E(): 4.6e-43, 42.68% id in 328 aa, and to FT Escherichia coli D-xylose-binding periplasmic protein FT precursor XylF or XylT or b3566 SWALL:XYLF_ECOLI FT (SWALL:P37387) (330 aa) fasta scores: E(): 1.8e-10, 34.19% FT id in 310 aa" FT /db_xref="UniProtKB/TrEMBL:Q83HR5" FT /protein_id="CAD67112.1" FT /translation="MSISKGLFRAVLFTAAASLFLMSCLGGGRDESKTGGVSYTKGFPS FT DSLIGVAIAKKTSQNQVDAGNFFEELLKDAGFKSKVVFANNGVSEQQSQIDNMIASGAK FT VIVVNAVDSSLLGPQLKRARQAGVIVFDYDRLLENTKDVDFYVTYNARTVGILQANALL FT QGLEKKKPGGPWNIELFAGSPDDSNSRIFFDSAMSVLNEKIKSGKLIVVSGQTDFAKAV FT TQDWSAENAQKRMDVLLSTYYNTKQLDGVLGPNDVLARAILRSVELAGKPVPVVVGQDA FT EEPSLKLIAAGKQYSTVAKSTRALVEATVKAIKQLADKKLPETNSKSNNGEVEIPTILL FT TPKIITKENLDTIYKK" FT misc_feature 158886..158972 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.998) with cleavage FT site probability 0.459 between residues 34 and 35" FT misc_feature 158925..158957 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 159018..159927 FT /note="Periplasmic binding proteins and sugar binding FT domain of the LacI family Score = -36.0 E-value = 0.0031" FT CDS 160012..160953 FT /transl_table=11 FT /locus_tag="TW444" FT /product="putative carboxypeptidase" FT /note="Similar to Streptomyces clavuligerus Pbp2 protein or FT PbpA SWALL:O54201 (EMBL:AJ001743) (696 aa) fasta scores: FT E(): 7.8e-10, 32.36% id in 207 aa, and to Bacillus subtilis FT penicillin-binding protein DacF precursor SWALL:DACF_BACSU FT (SWALL:P38422) (389 aa) fasta scores: E(): 0.0009, 23.07% FT id in 299 aa" FT /db_xref="GOA:Q83HR4" FT /db_xref="HSSP:1J9M" FT /db_xref="InterPro:IPR001967" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:Q83HR4" FT /protein_id="CAD67113.1" FT /translation="MRLYRPLFYACLLLSFLFFILSDRYGMERTQSPHTVDISQRYFAD FT SSLSLLPHLLDPDIKHIALDVDGHPELKLRKGNKGKHPIASISKVILALMLIERYSLSE FT LNDGPNITYDTEDVSFFRNSVKDGDSYAPVYAGLTLTLKQSLIPLMLPSANNYATSLVK FT HLYGKSYPKFAREWLDKNGLYNTDIYEASGLDDRNVSTTDNLIVLAKKAYSNPVLRGIM FT RLKEASIPNIGLVRNTNKALGINGIDGIKTGSSPAAKSNLLFTAAIKTKNGLIRIYGVF FT KTEKSYASLYGKLDTLLKRVRAYFHQRNLLTD" FT misc_feature 160012..160089 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.788) with cleavage FT site probability 0.466 between residues 26 and 27" FT misc_feature 160030..160089 FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 7-26" FT misc_feature 160141..160921 FT /note="D-alanyl-D-alanine carboxypeptidase Score = -22.6 FT E-value = 5.3e-09" FT CDS complement(161059..162129) FT /transl_table=11 FT /gene="adh" FT /locus_tag="TW445" FT /product="alcohol dehydrogenase" FT /EC_number="1.1.1.1" FT /note="Similar to Alcaligenes eutrophus alcohol FT dehydrogenase Adh SWALL:ADH_ALCEU (SWALL:P14940) (366 aa) FT fasta scores: E(): 3.4e-24, 35.13% id in 370 aa" FT /db_xref="GOA:Q83HR3" FT /db_xref="HSSP:1F8F" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002328" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q83HR3" FT /protein_id="CAD67114.1" FT /translation="MRMKALVYHGPGKRSLDTVDDPTIKLGTDVILEMETTTICGSDLH FT ILKGDVAAVKPGTVLGHEGIGKIVEVGKDVKSHSVGDRVIVSPMSSCGVCRFCRANNNG FT HCLGDSEGPGGWRLGGLINGVQAQFARIPLADNSLHKLPSGLDPKVGILVSDVLPTGHE FT VGAQAGQVTLGSVVAVIGCGPVGLGAIVTSLLYSPSKVIAVDADSNRLELARKLGATDT FT VRVNRERPLDAIEDVKKLTEGGFGVDVAIEAVGVPVTFSMALGIAAPGGRVANIGVHGA FT PVDFPLQDLWDKNIAVTLGIVSTHTIPLLLAALSEGKIDASQFVTHEFDLSDLERAYDV FT FSAAAQHNVVKVAIRA" FT misc_feature complement(161067..162108) FT /note="Zinc-binding dehydrogenase Score = 238.1 E-value = FT 8.8e-69" FT misc_feature complement(161905..161949) FT /note="PS00059 Zinc-containing alcohol dehydrogenases FT signature." FT CDS 162396..163262 FT /transl_table=11 FT /locus_tag="TW446" FT /product="putative TatD-family DNase" FT /note="Similar to Escherichia coli putative FT deoxyribonuclease YcfH or b1100 or z1739 or ecs1478 FT SWALL:YCFH_ECOLI (SWALL:P37346) (265 aa) fasta scores: E(): FT 5.3e-15, 30.38% id in 283 aa" FT /db_xref="GOA:Q83NJ6" FT /db_xref="HSSP:1J6O" FT /db_xref="InterPro:IPR001130" FT /db_xref="InterPro:IPR012278" FT /db_xref="InterPro:IPR015991" FT /db_xref="InterPro:IPR015992" FT /db_xref="UniProtKB/TrEMBL:Q83NJ6" FT /protein_id="CAD67115.1" FT /translation="MPLTLPSPVYDSHTHLAPGTDYKDQLDRAEAVNVIGVLQVGTDVN FT TSHASVELAMQDQRILAAVAIHPNDAADIYKKANDATHRVEGQPHTECEKCIPPAKALE FT KSLTQIANLAGSKRVRAIGETGLDYFRTQSDLYRAAQRFSFDAHIQIAKEHNLALQIHD FT RDAHRDVIECLLRAGAPDRTIFHCFSGDEQMLEICIKNGWYMSCSGIITFKNAREMQKI FT FAKVPKELLLVETDAPFLTPSPFRGFMNSSYMLAHTVRALAEIRQENIDQLCTQLSRNT FT CEIFGKW" FT misc_feature 162435..163251 FT /note="TatD related DNase Score = 247.1 E-value = 1.7e-71" FT CDS join(163545..163586,163588..164229) FT /transl_table=11 FT /locus_tag="TW447" FT /product="putative integral membrane protein" FT /note="No significant database matches. Frameshifted at FT potentially variable G(11) tract after aa 14. Contain 6x FT PTT(S/V) repeat at residue 153-176." FT /db_xref="UniProtKB/TrEMBL:Q83NJ5" FT /protein_id="CAD67116.1" FT /translation="MIGVARKLFQNPSGGGISRISMPVCLTGVSALLLALVFITPASHA FT YAGRAAAHVFATRNYNCLGTFLFAYRQRGSSAPKPVCREFYQRKPSSKPPVPHKPVPAK FT PSSKPPAQQRPPVPHNNPRPLPAKPTSQPTSKPQRPSVPVVHPVPPAAPTTSPTTSPTT FT SPTTSPTTSPTTVTAPSEPAPTTDTTKQLSTSNGRARLPWWVMLVTGLSGLFLGSGLVA FT LPFLL" FT misc_feature 163549..163680 FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.479 between residues 44 and 45" FT repeat_region 163583..163593 FT /note="(g)11" FT misc_feature order(163591..163659,164146..164214) FT /note="2 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 15-37 and 200-222" FT repeat_region 164002..164061 FT /note="(ccaactacatca)5" FT CDS 164391..164660 FT /transl_table=11 FT /locus_tag="TW449" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO2947 or SCE59.06c SWALL:Q9L1U7 (EMBL:AL138851) FT (97 aa) fasta scores: E(): 2.5e-08, 48.27% id in 58 aa" FT /db_xref="UniProtKB/TrEMBL:Q83HR2" FT /protein_id="CAD67117.1" FT /translation="MIDVLDHFATTVIDSARSYGPCHDAIEDMVGQDDGDGLAHYARKG FT EITRSYVMGIPVIALCGKRWLPSRLPDKLPICQTCSDIYNSLSD" FT CDS complement(164661..165437) FT /transl_table=11 FT /locus_tag="TW450" FT /product="putative oxidoreductase" FT /note="Similar to Ralstonia solanacearum probable FT dehydrogenase oxidoreductase protein Rsp0305 or rs05466 FT SWALL:Q8XT12 (EMBL:AL646077) (255 aa) fasta scores: E(): FT 1.2e-07, 32.06% id in 237 aa, and to Escherichia coli FT 7-alpha-hydroxysteroid dehydrogenase HdhA or HsdA or b1619 FT or z2624 or ecs2327 SWALL:HDHA_ECOLI (SWALL:P25529) (255 FT aa) fasta scores: E(): 2.4e-05, 28.63% id in 234 aa" FT /db_xref="GOA:Q83NJ4" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q83NJ4" FT /protein_id="CAD67118.1" FT /translation="MTDLGLIVFDSDVLRDKNVLITGGSRGIGAKTAYFLAQGGAQVSI FT VYRNGAARADKVLHEIESGTGIKGCAVRADITTDQDVLRQFLKEKVEKLDILILNASGG FT MESGMPGDYPMRLNRDAQLNTVETCLPFMPAGSRVVFVTSHQAHFITTCQTLPEYEKVA FT LSKRAGEDALVQKMKDIPYIGFVVVSGDMIVGTVTAMLINRLYPGALDERRNKTGKLYD FT VSEFAAEVARAAIDPIPEGNIKFVGDISTFLADTEG" FT misc_feature complement(164693..165395) FT /note="short chain dehydrogenase Score = -3.1 E-value = FT 3e-07" FT CDS complement(165434..166156) FT /transl_table=11 FT /gene="tatC" FT /locus_tag="TW451" FT /product="sec-independent protein translocase protein TatC" FT /note="Similar to Pseudomonas stutzeri TatC protein FT SWALL:Q9AKS0 (EMBL:AJ299712) (267 aa) fasta scores: E(): FT 8.5e-12, 31.12% id in 241 aa, and to Streptomyces lividans FT twin arginine translocation pathway TatC SWALL:Q9F2H3 FT (EMBL:AJ251149) (301 aa) fasta scores: E(): 5.9e-19, 35.1% FT id in 245 aa" FT /db_xref="InterPro:IPR002033" FT /db_xref="InterPro:IPR011532" FT /db_xref="UniProtKB/TrEMBL:Q83NJ3" FT /protein_id="CAD67119.1" FT /translation="MTLLGHIAEFRSVLLISGLAILLCSVIGWIFFDQIFAALREPIRT FT LLSRKRIATLNFPVLSAAFELRIQVAFTIGVILASPVWLHQLFYFFLPALKRTERIIAI FT LFVAVNVPLFLFGAFLAWRLFPNIVQIATEFASPEDTLIMDARLYYAFALKLLLVIGAA FT FVIPSFLVFLNILRVVSAKAIVKMWRVIILVVIVFSAAVTPASDVVSMFLLAAPVIFLY FT GFACLICFGYEKIRDSLS" FT misc_feature complement(order(165464..165532,165542..165595, FT 165629..165697,165788..165856,165881..165949, FT 166061..166120)) FT /note="6 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 13-32, 70-92, 101-123, FT 154-176, 188-205 and 209-231" FT misc_feature complement(165508..166117) FT /note="MttB family UPF0032 Score = 77.0 E-value = 2.8e-20" FT CDS complement(166167..166448) FT /transl_table=11 FT /gene="tatA" FT /locus_tag="TW452" FT /product="sec-independent protein translocase protein TatA" FT /note="Similar to Escherichia coli sec-independent protein FT translocase protein TatA or MttA1 or b3836 or z5358 or FT ecs4766 SWALL:TATA_ECOLI (SWALL:O65938) (89 aa) fasta FT scores: E(): 0.11, 28.57% id in 91 aa, and to Helicobacter FT pylori sec-independent protein translocase protein TatA/E FT homolog TatA or hp0320 SWALL:TATA_HELPY (SWALL:O25088) (79 FT aa) fasta scores: E(): 0.00039, 31.25% id in 80 aa" FT /db_xref="GOA:Q83NJ2" FT /db_xref="InterPro:IPR003369" FT /db_xref="InterPro:IPR006312" FT /db_xref="UniProtKB/Swiss-Prot:Q83NJ2" FT /protein_id="CAD67120.1" FT /translation="MGNVFSGWHLLVILLVIVLLFGTSRLPKLSKSVVEALKIFRRSFN FT EASDITRSQDGHPDSQGNFAESASSVPFVKSEKQSEKRASVTEAKKSK" FT misc_feature complement(166268..166436) FT /note="mttA/Hcf106 family Score = 34.0 E-value = 2.4e-07" FT misc_feature complement(166383..166436) FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 5-22" FT CDS complement(166453..167337) FT /transl_table=11 FT /locus_tag="TW453" FT /product="putative drug-binding lipoprotein" FT /note="Similar to Streptomyces chrysomallus FKBP-33 FT precursor FkbB SWALL:Q53919 (EMBL:Z34523) (312 aa) fasta FT scores: E(): 1.8e-12, 36.29% id in 281 aa" FT /db_xref="GOA:Q83HR1" FT /db_xref="HSSP:1FKL" FT /db_xref="InterPro:IPR001179" FT /db_xref="UniProtKB/TrEMBL:Q83HR1" FT /protein_id="CAD67121.1" FT /translation="MVSLKFVVLTFGLVALLSGCADQGIKVDGKFGTPVRVSIETVVKV FT KDVTRTVIDEGDGPELKSGDLVAYQVAYFNGTTGDRIKPGEFGTARGISTYTVGQGAYL FT DKILQKVKVHSRILAQVPGALLWGSDSRPEGVGERDNAVVVLDVLNVIATKLNGPKKPS FT PPGLPTVVDSANGPKILPVTAPAPQALSVVTLIEGSGHPVKPTDKVTVHYVGALWSGKV FT FDSSWNRRAPAEFLLDGLIKGVKDGLVGAKVGSRLLIVVPPALGYGDKAQGDIPANSTL FT IFVFDILMATSRN" FT misc_feature complement(166476..166746) FT /note="FKBP-type peptidyl-prolyl cis-trans isomerase Score FT = 108.2 E-value = 1.1e-29" FT misc_feature complement(166660..166707) FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT misc_feature complement(167130..167172) FT /note="FKBP-type peptidyl-prolyl cis-trans isomerase Score FT = 0.2 E-value = 4.6" FT misc_feature complement(167257..167337) FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 0.996) with cleavage FT site probability 0.759 between residues 27 and 28" FT misc_feature complement(167278..167310) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(167355..168323) FT /transl_table=11 FT /locus_tag="TW454" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SCO1651 or SCI41.34c SWALL:Q9RJ57 (EMBL:AL132648) FT (300 aa) fasta scores: E(): 7.6e-17, 35.97% id in 303 aa" FT /db_xref="GOA:Q83HR0" FT /db_xref="HSSP:1I9G" FT /db_xref="InterPro:IPR014816" FT /db_xref="UniProtKB/TrEMBL:Q83HR0" FT /protein_id="CAD67122.1" FT /translation="MSFNNSYLFENFDWSEFVYPKNKKKLVQLVPGKRIDSSFGAINCD FT QILGHPEGVVVTTCKNHEVIAFRATLDSYTSLAKRKTAIIFPQVCAFIIAVADIRPGLN FT VLEAGVGSGALTIWLLNALAGFGTLYSFEERREFLALAKRNVSDFLGFKSRGNPLSKTS FT TQSDPTCDPSCNNIPDNWICVEGNLRENIFLNLESGSIDRVVLDMLKPWECVESVTVAL FT RPGGIFVCYATGLIQVSRLVETLRNTGFYTEPIVYETLQRKWHIEGLSIRPNHSGMKPG FT GFLIMVRRLFKKNSLRIRQKPIHKHKFDKDDIPAWLPEQIG" FT CDS 168381..169271 FT /transl_table=11 FT /locus_tag="TW455" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT Ml1306 SWALL:Q9CC38 (EMBL:AL583921) (274 aa) fasta scores: FT E(): 1.7e-30, 36.36% id in 275 aa" FT /db_xref="InterPro:IPR002766" FT /db_xref="InterPro:IPR008492" FT /db_xref="UniProtKB/TrEMBL:Q83HQ9" FT /protein_id="CAD67123.1" FT /translation="MASFLDCRVLIAAFEDWGDAGKVSTTALRMLMEIFHAKPVKEIDA FT DDYLDYHLYRPRCESKDGVRKIYWPAPTVYKMSNEPGVPSGSAEDIYFLISPEPNMRWR FT KFAVEIVDYAKANNISGIIFLGSMLTDIPHTRPFPVFLTSEEPKVRYEIGVAKPSYEGP FT VSVASAIQEAARKELIDTLSLWAPVPHYTQGLPCPKALLALLVQVENLLSSSFTDQISL FT KAEVQKWEERVTQAASSDPRLLEYIKQLEELQDRVALSSTANDHLVKSLERYLSSIRRE FT SEEFPTISRLRELPE" FT CDS complement(169213..170565) FT /transl_table=11 FT /gene="cysS2" FT /locus_tag="TW456" FT /product="cysteinyl-tRNA synthetase" FT /EC_number="6.1.1.16" FT /note="Similar to Escherichia coli cysteinyl-tRNA FT synthetase CysS or b0526 SWALL:SYC_ECOLI (SWALL:P21888) FT (461 aa) fasta scores: E(): 2e-23, 32.06% id in 315 aa, and FT to Streptomyces coelicolor putative cysteinyl-trna FT synthetase sco1663 or sci52.05C SWALL:Q9ADA4 FT (EMBL:AL590507) (409 aa) fasta scores: E(): 6e-44, 40.22% FT id in 348 aa" FT /db_xref="GOA:Q83HQ8" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015803" FT /db_xref="InterPro:IPR015804" FT /db_xref="UniProtKB/Swiss-Prot:Q83HQ8" FT /protein_id="CAD67124.1" FT /translation="MYTFEVFDSRTRSIVKLEDCLLRLYVCGITPYKSTHLGHAFTYVG FT FDTLFRLALDSGRDVLYIQNISDIDEPLFQYAEKVGIHYKDLARTQTKRFFEDMHTLEC FT LPPGYVIPVSKVLDGIKTGIEGLISRNMAYKLPNGDVYFDSTLTDPGKMFCFDRKTAMS FT LMLETDTGKNPFDPLLWRGRGAEPQWEASFGAGRPAWHISCAVLSNLQTQYENVLHIYG FT GGRDLAFPHHEFTNVLSKLIRAPKDNKQQDTVQDVFMHTGLVSYMGDKMSKSKGNLVFI FT SQLREQCEKIGLHHSVIRLALLQRHYREDWEWQDECLDRAASRFRLWKSALQEYIGAKG FT IRSTADQNKGTQGAWERIHGGVFDSNFDHRQPIHPKHSPQMRDYSEHGSAGQNGTDLDL FT SLYQAIRFHLCNDLDTPKALDAVDSYARKGTITIPEARAVEKLLGIPLTRV" FT misc_feature complement(169275..170529) FT /note="tRNA synthetases class I (C) Score = 16.7 E-value = FT 1.1e-14" FT CDS complement(170619..171458) FT /transl_table=11 FT /gene="upk" FT /locus_tag="TW457" FT /product="putative undecaprenol kinase" FT /EC_number="2.7.1.66" FT /note="Similar to Staphylococcus aureus putative FT undecaprenol kinase Upk or BacA or mw0645 SWALL:BAB94510 FT (EMBL:AP004824) (291 aa) fasta scores: E(): 6.4e-18, 27.93% FT id in 290 aa, and to Streptomyces coelicolor putative FT undecaprenol kinase 2 Upk2 or BacA2 or SCO1326 or 2SCG61.08 FT SWALL:UPK2_STRCO (SWALL:Q9K407) (291 aa) fasta scores: E(): FT 1.4e-25, 32.98% id in 285 aa" FT /db_xref="GOA:Q83HQ7" FT /db_xref="InterPro:IPR003824" FT /db_xref="UniProtKB/Swiss-Prot:Q83HQ7" FT /protein_id="CAD67125.1" FT /translation="MVLEAVLLGIVQGITEFLPISSTAHMYILAKLLNLHVPGRFFLSS FT VQLGTSFALILYFFKDVKGIISETSRSIYSFIQFGIRQKQEKRNEYTRLGLLLVTGTIP FT VVLLGFLLVRFVPDGFFSAARNLFTMGVALIVFGLLLGFADALFRRKKGNIFQITFIES FT VLIGAAQIFAIIPGVSRSGITITTARFLNFDRQLAVRFSFLLSLPVTFIGGMYGLVAGP FT DTDYYSLGYSLIGAIVSFVVGLLVVSALLRIISKTTFVLFVYYRVLFGLFLVIVSFF" FT misc_feature complement(order(170628..170687,170706..170774, FT 170802..170870,171015..171083,171111..171179, FT 171282..171350,171378..171446)) FT /note="7 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 5-27, 37-59, 94-116, 126-148, FT 197-219, 229-251 and 258-277" FT misc_feature complement(170642..171449) FT /note="Bacitracin resistance protein BacA Score = 239.2 FT E-value = 4.1e-69" FT tRNA complement(171533..171619) FT /note="tRNA Leu anticodon GAG, Cove score 55.44" FT CDS complement(171667..171918) FT /transl_table=11 FT /gene="rpmE" FT /locus_tag="TW458" FT /product="50s ribosomal protein L31" FT /note="Similar to Streptomyces coelicolor 50s ribosomal FT protein L31 type B-2 RpmE3 or SCO3427 or SCE9.34c FT SWALL:R31C_STRCO (SWALL:Q9X8K6) (84 aa) fasta scores: E(): FT 9.3e-17, 55.55% id in 81 aa, and to Guillardia theta FT chloroplast 50s ribosomal protein l31 rpl31 FT SWALL:RK31_GUITH (SWALL:O46917) (72 aa) fasta scores: E(): FT 0.00065, 35.06% id in 77 aa" FT /db_xref="GOA:Q83HQ6" FT /db_xref="InterPro:IPR002150" FT /db_xref="UniProtKB/Swiss-Prot:Q83HQ6" FT /protein_id="CAD67126.1" FT /translation="MKSDIHPEYGYVVFKDLASSEMFLTRSVLKPEKQIEWNDGNHYPL FT FEVEISSASHPFYTGQQRILDSEGRVEKFYARYKKQSQ" FT misc_feature complement(171678..171918) FT /note="Ribosomal protein L31 Score = 74.1 E-value = FT 2.1e-19" FT misc_feature complement(171700..171756) FT /note="PS01143 Ribosomal protein L31 signature." FT CDS complement(172060..172776) FT /transl_table=11 FT /gene="fabG" FT /locus_tag="TW459" FT /product="3-oxoacyl-[acyl-carrier protein] reductase" FT /EC_number="1.1.1.100" FT /note="Similar to Escherichia coli 3-oxoacyl-[acyl-carrier FT protein] reductase FabG or b1093 SWALL:FABG_ECOLI FT (SWALL:P25716) (244 aa) fasta scores: E(): 1.5e-33, 43.51% FT id in 239 aa, and to Streptomyces coelicolor probable FT 3-oxacyl- FabG or SCO1815 or SCI28.09c SWALL:Q9S274 FT (EMBL:AL096844) (234 aa) fasta scores: E(): 1.3e-42, 51.93% FT id in 233 aa" FT /db_xref="GOA:Q83HQ5" FT /db_xref="HSSP:2AE1" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q83HQ5" FT /protein_id="CAD67127.1" FT /translation="MSSKRTVFITGGNRGIGRAIAEKFKSFNYNVAIGVRQPEAFKDAG FT CLAVECDVTVSSSLTKAFKEVEERFGFVDVAIANAGIIRDTLVLRMKEDDFQHILDTNL FT TGAWRLAKLASRSMMRNKFGRIVFISSVSAGMGGIGQTNYSASKAGMIGLARALTRELA FT SFGITVNVVAPGIVQTDMVSSIPDNLREELIQRVPIRRIGLPEEVANAVFWLSSDEASY FT VSGVVLPVDGGLSMGF" FT misc_feature complement(172077..172770) FT /note="short chain dehydrogenase Score = 264.4 E-value = FT 1.1e-76" FT CDS complement(172780..173955) FT /transl_table=11 FT /locus_tag="TW460" FT /product="putative glycosyltransferase" FT /note="Similar to Methanosarcina mazei glycosyltransferase FT mm1142 SWALL:AAM30838 (EMBL:AE013343) (379 aa) fasta FT scores: E(): 3.6e-24, 29.59% id in 392 aa, and to FT Arabidopsis thaliana sulfolipid synthase Sqd2 SWALL:Q8S4F6 FT (EMBL:AF454354) (510 aa) fasta scores: E(): 2.8e-11, 27.91% FT id in 283 aa" FT /db_xref="GOA:Q83HQ4" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q83HQ4" FT /protein_id="CAD67128.1" FT /translation="MVHGKSLRVLIGTETFPPEVNGAAKFSGRLASCLIERGHIVRVVA FT PSRTRGRGGEYLEEIEGNAVLVYRLPSVKWPGHSWFRFASPLFVSRFCSKIIDDFQPDV FT IHYQSHFMIGLSLSKKGRARGVRLVGTNHFMPDNVIHYCEFLPTFLHKFLWKANWHYAS FT RCFARADVVTSPTQSAANFLERYTTIENVVPISCGIDLSGYTPSFERGSVLLYVGRITR FT EKQLDVLIRAFAKLNNKDITLKLVGIGEEVEPLRALAYSLGVSDRVVFCGYLEEGDLRK FT TYSEASVFVMPSTAELQSIATMEAMASGLPVVGADSMALPHLVRDGENGYLFSPGDPDD FT LASKLTAVIALDDADFAAMQRRSLEIVAEHEIDRTIDAFERLYAGSQVSCN" FT misc_feature complement(172860..173364) FT /note="Glycosyl transferases group 1 Score = 132.9 E-value FT = 4e-37" FT CDS complement(174160..174927) FT /transl_table=11 FT /locus_tag="TW461" FT /product="putative integral membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCO0973 or SCM11.28 SWALL:Q9RIT4 FT (EMBL:AL133278) (419 aa) fasta scores: E(): 2.9e-09, 28.63% FT id in 234 aa" FT /db_xref="InterPro:IPR008521" FT /db_xref="UniProtKB/TrEMBL:Q83NJ1" FT /protein_id="CAD67129.1" FT /translation="MQNKTGLHKFVMLFKQRLWVLGAVLLAIASILQVLSLVFAPLVVV FT QPLGALAIVISVALNSIHQKKRGRAVYSFGKMQLPVLSCVTGVGLFVLVAALFAEEKTI FT DNKKITVTILVALSICIVLLFLMKYKNFVLYIVAAGIMYGLVVTFTDTVIGRIQAGFFN FT VFALFALFALFATGIMGAYMVQKAHGIGSPDLVVAGLTVIDPIVAVVLGAIVLGEIDDM FT PVWGYILMLSAGCIAIWGVLGLCRIYLRSKSDL" FT misc_feature complement(order(174181..174249,174277..174345, FT 174382..174450,174463..174531,174550..174603, FT 174631..174690,174751..174819,174832..174891)) FT /note="8 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 13-32, 37-59, 80-99, 109-126, FT 133-155, 160-182, 195-217 and 227-249" FT misc_feature complement(174772..174927) FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.574 between residues 52 and 53" FT CDS 175172..175777 FT /transl_table=11 FT /gene="def" FT /locus_tag="TW462" FT /product="peptide deformylase" FT /EC_number="3.5.1.88" FT /note="Similar to Thermus thermophilus peptide Deformylase FT Def SWALL:DEF_THETH (SWALL:P43522) (192 aa) fasta scores: FT E(): 6.4e-15, 38.69% id in 168 aa, and to Mycobacterium FT leprae peptide deformylase Def or ml1929 SWALL:DEF_MYCLE FT (SWALL:Q9CBI2) (197 aa) fasta scores: E(): 8.2e-20, 39.6% FT id in 202 aa" FT /db_xref="GOA:Q83HQ3" FT /db_xref="InterPro:IPR000181" FT /db_xref="UniProtKB/Swiss-Prot:Q83HQ3" FT /protein_id="CAD67130.1" FT /translation="MPKISGGKILPIYITGHAVLHAPAKPVTDFSGIQEIVRDMFATMF FT AAPGVGLAGPQIGLGLRIFVYSYTEGDTLHQGVAINPDLLIPKGVPKRQTHKQQANNST FT SCDEPDREGCLSFPGYQFPLERAPQVTLSAFDENKKPFTVHATGWLARIFQHEFDHLQG FT TLYVDRLAQKYSGEVRQAVLNNKWGIPGKYWVPQEPKE" FT misc_feature 175193..175709 FT /note="Polypeptide deformylase Score = 170.8 E-value = FT 1.6e-48" FT CDS complement(175790..176608) FT /transl_table=11 FT /locus_tag="TW463" FT /product="probable prolipoprotein diacylglyceryl FT transferase." FT /db_xref="GOA:Q83HQ2" FT /db_xref="InterPro:IPR001640" FT /db_xref="UniProtKB/Swiss-Prot:Q83HQ2" FT /protein_id="CAD67131.1" FT /translation="MHFYIPPPPISGFWLGPLYVHMYSVFMLAGALVLFELTNRRFIVL FT TGNREFTAFAVTSLLIPVILGARLWHVVSHTQMYEHQPFYKVFAIWQGGLGFIGGVFSG FT LICFFVIAKIKKVPPFTFLDALAPGILVALCFARLGNYFNGEVFGTETTLPWGLKLSHE FT GFKDLNVEKYFHPIFLYEIILNVFIIVILLVLEKRVFVKTVFPKGSVFAAFLVLYGLGR FT FALEPMRYNLQQNSFGLDLNYVGAAAMIIVGVLIACRHTIASGKLRNSGD" FT misc_feature complement(order(175820..175888,175931..175987, FT 176024..176092,176192..176260,176279..176347, FT 176390..176458,176504..176572)) FT /note="7 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 13-35, 51-73, 88-110, FT 117-139, 173-195, 208-226 and 241-263" FT misc_feature complement(175822..176590) FT /note="Prolipoprotein diacylglyceryl transferase Score = FT 103.0 E-value = 4.1e-28" FT misc_feature complement(175835..175867) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 176720..177478 FT /transl_table=11 FT /gene="pgl" FT /locus_tag="TW464" FT /product="6-phosphogluconolactonase" FT /EC_number="3.1.1.31" FT /note="Similar to Mycobacterium tuberculosis FT 6-phosphogluconolactonase Pgl or DevB or Rv1445c or mt1492 FT or mtcy493.09 SWALL:6PGL_MYCTU (SWALL:O06814) (247 aa) FT fasta scores: E(): 8.5e-26, 34.41% id in 247 aa, and to FT Actinobacillus actinomycetemcomitans FT 6-phosphogluconolactonase Pgl or DevB SWALL:6PGL_ACTAC FT (SWALL:P70715) (232 aa) fasta scores: E(): 6.4e-17, 31.93% FT id in 238 aa" FT /db_xref="GOA:Q83HQ1" FT /db_xref="HSSP:1PBT" FT /db_xref="InterPro:IPR005900" FT /db_xref="UniProtKB/TrEMBL:Q83HQ1" FT /protein_id="CAD67132.1" FT /translation="MLSTHFQVRAFPNKSLLVEEVANRFLLTLENVLQKKASAHVGLEG FT GTMSELTLSRIAMYAARAKVIWNRVHFWWSDERYLPDGNSHRNYEQAKRCLFSRVKVPE FT GNIHQIPFIPGDINLAVRRYSDELERLSPDNGKVPEFDILFLGMGPDGHTASLFPNMSH FT PNVSVVPVFNAPKPPPERISMTLGAINNANRIWVQLSGLEKAKPLKSALEGADVLELPI FT AGVRGRLETIIFADKDAASLIPAEAHTQDY" FT misc_feature 176783..177455 FT /note="Glucosamine-6-phosphate FT isomerases/6-phosphogluconolactonase Score = -62.5 E-value FT = 0.00057" FT CDS complement(177475..177954) FT /transl_table=11 FT /gene="ppa1" FT /locus_tag="TW465" FT /product="inorganic pyrophosphatase" FT /EC_number="3.6.1.1" FT /note="Similar to Bacillus stearothermophilus inorganic FT pyrophosphatase Ppa or pmk2ppA SWALL:IPYR_BACST FT (SWALL:O05724) (164 aa) fasta scores: E(): 5.1e-27, 44.3% FT id in 158 aa" FT /db_xref="GOA:Q81ZK3" FT /db_xref="HSSP:1FAJ" FT /db_xref="InterPro:IPR008162" FT /db_xref="UniProtKB/TrEMBL:Q81ZK3" FT /protein_id="CAD67133.1" FT /translation="MQTLTAIVEIPRGSRSKYEIDKKTGRLFLDRVVSTAFGYPTNYGF FT IENTLALDGDPIDALILVQNQLFPGVALHIRPVGVLHMTDDGGEDDKVLCVALKDPYCD FT HINDLDDVPKHVLNQIEHFFQHYKDLEEGKWVKLGAWNGKDKAMEIITEGLSRFN" FT misc_feature complement(177480..177942) FT /note="Inorganic pyrophosphatase Score = 199.5 E-value = FT 3.6e-57" FT misc_feature complement(177778..177798) FT /note="PS00387 Inorganic pyrophosphatase signature." FT CDS complement(177957..178484) FT /transl_table=11 FT /locus_tag="TW467" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q81ZR0" FT /protein_id="CAD67134.1" FT /translation="MKKALVTLSFLTLIVTTQQSAFASPRHAGLGDALGNVFNHIGHTV FT KKKANELKNTVQREANNFKHTVQREANKFENTLKRAGQSVLQAGADAVVKAGVKVAQQA FT VAQNAQTIQTQVQAVSDQASTVATSLLAQANQSVDQVLGKVKVAARNAAITLVVAIISA FT VSSWFAITKWFA" FT misc_feature complement(177972..178031) FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 152-171" FT misc_feature complement(178416..178484) FT /note="Signal peptide predicted for Unknown_CDS by SignalP FT 2.0 HMM (Signal peptide probabilty 1.000) with cleavage FT site probability 0.991 between residues 23 and 24" FT CDS complement(178797..179162) FT /transl_table=11 FT /locus_tag="TW468" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor putative electron FT transport protein SCO1943 or SCC54.03c SWALL:Q9Z522 FT (EMBL:AL035591) (111 aa) fasta scores: E(): 3.2e-11, 44.34% FT id in 106 aa" FT /db_xref="UniProtKB/TrEMBL:Q83HQ0" FT /protein_id="CAD67135.1" FT /translation="MKQPSVSDKKKLFTAQSGTEVGDGLSFEIEDGRICVTYWDQEGNK FT TVRYYASDVPLDEIPRVITNPLNGLIAGCDYANPPESPRSEPFKTHLAYVKERRSKEEG FT QKILEEALRELRRRRAS" FT CDS complement(179234..179530) FT /transl_table=11 FT /gene="secG" FT /locus_tag="TW469" FT /product="protein-export membrane protein SecG" FT /note="Similar to Streptomyces coelicolor protein-export FT membrane protein SecG or SCO1944 or SCC54.04c FT SWALL:SECG_STRCO (SWALL:Q9Z521) (102 aa) fasta scores: E(): FT 7.6e-10, 50.66% id in 75 aa, and to Escherichia coli FT protein-export membrane protein SecG or b3175 or z4537 or FT ecs4054 SWALL:SECG_ECOLI (SWALL:P33582) (110 aa) fasta FT scores: E(): 0.22, 32.83% id in 67 aa" FT /db_xref="GOA:Q83NJ0" FT /db_xref="InterPro:IPR004692" FT /db_xref="UniProtKB/TrEMBL:Q83NJ0" FT /protein_id="CAD67136.1" FT /translation="MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKG FT RGGGLSDMFGGGITVSFASSGVAERNLNRLTVMLALLWGVTIITLSVLARFRL" FT misc_feature complement(179248..179467) FT /note="Preprotein translocase SecG subunit Score = 69.9 FT E-value = 3.7e-18" FT misc_feature complement(order(179249..179308,179405..179473)) FT /note="2 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 20-42 and 75-94" FT CDS complement(179561..180442) FT /transl_table=11 FT /gene="tpiA" FT /locus_tag="TW470" FT /product="triosephosphate isomerase" FT /EC_number="5.3.1.1" FT /note="Similar to Corynebacterium glutamicum FT triosephosphate isomerase TpiA or Tpi or cgl1586 FT SWALL:TPIS_CORGL (SWALL:P19583) (259 aa) fasta scores: E(): FT 1e-15, 35% id in 280 aa" FT /db_xref="GOA:Q83HP9" FT /db_xref="InterPro:IPR000652" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020861" FT /db_xref="UniProtKB/Swiss-Prot:Q83HP9" FT /protein_id="CAD67137.1" FT /translation="MLPKRAYPVQDSNVHSQEKKIIAGNWKMNINHSQAVSYLQELNWR FT LIDNGHDFDACEIAVFPPFTDLRSVQTLVASDDIQISYGAQDVSAFSDGAHTGQISAQF FT LKDLDCKYVLIGHSEQRCLPCYPGNNSAINELNNKHDGLIANKLLRSFAAGICPILCIG FT DISPGDHFDATLSRFRSVLSHLKAISDKKHSIGYALGSKTHFLDSDQLHMLVAYEPSSA FT INSGNCANSGDIVRMAAAIKDIVNVRVLYGGGVNLFNASAVFNEDLLDGILVGRASLNA FT SDFASLIKTCCL" FT misc_feature complement(179575..180391) FT /note="Triosephosphate isomerase Score = 87.4 E-value = FT 2.1e-23" FT CDS complement(180444..181631) FT /transl_table=11 FT /gene="pgk" FT /locus_tag="TW471" FT /product="phosphoglycerate kinase" FT /EC_number="2.7.2.3" FT /note="Similar to Streptomyces coelicolor phosphoglycerate FT kinase Pgk or SCO1946 or SCC54.06c SWALL:PGK_STRCO FT (SWALL:Q9Z519) (403 aa) fasta scores: E(): 2.7e-64, 47.81% FT id in 389 aa, and to Thermotoga maritima bifunctional FT Pgk/Tim [includes: phosphoglycerate kinase pgk/tpi or FT tm0689 SWALL:PGKT_THEMA (SWALL:P36204) (654 aa) fasta FT scores: E(): 1.3e-55, 45.47% id in 387 aa" FT /db_xref="GOA:Q83HP8" FT /db_xref="InterPro:IPR001576" FT /db_xref="InterPro:IPR015824" FT /db_xref="InterPro:IPR015901" FT /db_xref="UniProtKB/Swiss-Prot:Q83HP8" FT /protein_id="CAD67138.1" FT /translation="MRTLGGFTFPCDAPVFVRVDFNVPMDEVGTITDDLRIRASLPTIE FT SLLGRGAPLILISHLGRPVKNEQQGFSLKPCAERLSEYIGVNVPLVDFLDLDTKLYGEL FT TRHLDKSGIVLFENIRFFAEETSKAQADRRILAEQLAPFAGAYVNDAFGASHRRHASVY FT ELAQAFSNKAAGFLIESEMQAFSHLASEAKRPYTVILGGAKLSDKLRLIENILPTVDRL FT LLCGGMAFTFLAAQGCETGKSLLEESFISEANKIIDFAKQNNVELILPVDVIEARSLTS FT PLGVVSKAESISYMGLDIGPETQSIFRNVIQDSKTVFWNGPAGLFENPSFSNGTRALLD FT ALSSSSAFTFIGGGDTAAAVSLLGFDYGDFSHVSTGGGACLELLEGKILPALEVL" FT misc_feature complement(180449..181622) FT /note="Phosphoglycerate kinase Score = 483.6 E-value = FT 1.1e-142" FT CDS complement(181638..182651) FT /transl_table=11 FT /gene="gap" FT /locus_tag="TW472" FT /product="glyceraldehyde 3-phosphate dehydrogenase" FT /EC_number="1.2.1.12" FT /note="Similar to Corynebacterium glutamicum glyceraldehyde FT 3-phosphate dehydrogenase Gap or cgl1588 SWALL:G3P_CORGL FT (SWALL:Q01651) (336 aa) fasta scores: E(): 2.2e-80, 59.58% FT id in 339 aa" FT /db_xref="GOA:Q83HP7" FT /db_xref="HSSP:1NQO" FT /db_xref="InterPro:IPR000173" FT /db_xref="InterPro:IPR006424" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020828" FT /db_xref="InterPro:IPR020829" FT /db_xref="InterPro:IPR020830" FT /db_xref="InterPro:IPR020831" FT /db_xref="InterPro:IPR020832" FT /db_xref="UniProtKB/TrEMBL:Q83HP7" FT /protein_id="CAD67139.1" FT /translation="MTVKIAINGFGRIGRGFFRALSSPSCIDGPEIDVVAINDLTSPEV FT LAHLLRRDTIFGRFPESVCHDGTKLLVGKREVAVFSEKDPSSIPWNGVDIVIESTGLFT FT DANIASGHITAGSKRVIISAPAKNEDATFVVGVNHTDYDPNKHSIVSNASCTTNCLAPL FT AKVFDDTFGIERGLMTTVHAYTADQRLQDAPHSDLRRARAAAMNLVPTSTGAACAIGLV FT LPNLKGKLDGFAIRVPVITGSITDLSLVSKTDVSAPEVNEAYRRAALGPLKGILCYSED FT PLVSSDIVADGHSCIYDANLLRISGNMVKLSAWYDNEWAYSRRLVDLAKYMASVGL" FT misc_feature complement(181709..182186) FT /note="Glyceraldehyde 3-phosphate dehydrogenase, C-terminal FT domain Score = 324.2 E-value = 1.1e-94" FT misc_feature complement(182172..182195) FT /note="PS00071 Glyceraldehyde 3-phosphate dehydrogenase FT active site." FT misc_feature complement(182189..182648) FT /note="Glyceraldehyde 3-phosphate dehydrogenase, NAD FT binding domain Score = 265.2 E-value = 6.3e-77" FT CDS complement(182673..183281) FT /transl_table=11 FT /gene="sodA" FT /locus_tag="TW473" FT /product="superoxide dismutase" FT /EC_number="1.15.1.1" FT /note="Similar to Propionibacterium freudenreichii FT shermanii superoxide dismutase [mn/fe] sodA FT SWALL:SODM_PROFR (SWALL:P80293) (201 aa) fasta scores: E(): FT 9.6e-47, 61.53% id in 195 aa" FT /db_xref="GOA:Q83HP6" FT /db_xref="HSSP:1AVM" FT /db_xref="InterPro:IPR001189" FT /db_xref="InterPro:IPR019831" FT /db_xref="InterPro:IPR019832" FT /db_xref="InterPro:IPR019833" FT /db_xref="UniProtKB/TrEMBL:Q83HP6" FT /protein_id="CAD67140.1" FT /translation="MLLYTLPNLPYGYSALEPYISGKIMELHHSKHHKAYVDGANQALE FT QLCEARDKGDFSRVPQLQKNLAFNLAGHKNHSVFWSVLTPEVGQAPAGPFLEVIERDFG FT SFDSFMNHFSAAALSIQGSGWAVLSWEPVASRLIIQQFYDHQNNAVSARNLLLLDMWEH FT AYYLDYLNVKADYVKAFWSIVNWHGVTDKFLKIAGRSVV" FT misc_feature complement(182699..183020) FT /note="Iron/manganese superoxide dismutases, C-terminal FT domain Score = 147.4 E-value = 1.8e-41" FT misc_feature complement(182784..182807) FT /note="PS00088 Manganese and iron superoxide dismutases FT signature." FT misc_feature complement(183032..183278) FT /note="Iron/manganese superoxide dismutases, alpha-hairpin FT domain Score = 150.6 E-value = 2e-42" FT CDS complement(183366..184325) FT /transl_table=11 FT /locus_tag="TW474" FT /product="conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor WhiA SWALL:Q9S4Y1 FT (EMBL:AF106003) (330 aa) fasta scores: E(): 5e-40, 42.71% FT id in 309 aa" FT /db_xref="GOA:Q83HP5" FT /db_xref="InterPro:IPR003802" FT /db_xref="InterPro:IPR018478" FT /db_xref="UniProtKB/Swiss-Prot:Q83HP5" FT /protein_id="CAD67141.1" FT /translation="MNSLLQALHLLRCDLLSLPIGDAQTRSAELTALLRFGADLNIIKR FT RVVIEVKLCGSLLLNRVESVLRNIYGITPKLIRSTPRNDIGESCFLLRIDDPSLARKLG FT LIDTSLAPVRGLPNHLALASGSALKGLVRGAILASGVFTESTRKFAMEVYAPSNETALC FT LQGSINKLNVIAKIKEVRGSYKVVIRDIDNVAPLLRNVGARNSVEKIEQFIKLRHPENL FT GPRLPNFDDANLRRSAIAAASSVRRIERALQILKGDAPQHLLYAGQLRLNNTHASLEEL FT GKLAEPAMTKDAIAGRIRRLLCLADKRAKTLGIPDTFS" FT misc_feature complement(183410..184283) FT /note="Uncharacterized BCR, COG1481 Score = 107.9 E-value = FT 1.4e-29" FT CDS complement(184335..186158) FT /transl_table=11 FT /gene="uvrC" FT /locus_tag="TW475" FT /product="excinuclease ABC subunit C" FT /note="Similar to Escherichia coli excinuclease ABC subunit FT C UvrC or b1913 SWALL:UVRC_ECOLI (SWALL:P07028) (610 aa) FT fasta scores: E(): 2.9e-48, 32.72% id in 608 aa, and to FT Streptomyces coelicolor excinuclease ABC subunit C UvrC or FT SCO1953 or SCC54.13c SWALL:UVRC_STRCO (SWALL:Q9Z512) (728 FT aa) fasta scores: E(): 5.2e-62, 36.6% id in 672 aa" FT /db_xref="GOA:Q83NI9" FT /db_xref="InterPro:IPR000305" FT /db_xref="InterPro:IPR000445" FT /db_xref="InterPro:IPR001162" FT /db_xref="InterPro:IPR001943" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR004791" FT /db_xref="InterPro:IPR009055" FT /db_xref="InterPro:IPR010994" FT /db_xref="UniProtKB/Swiss-Prot:Q83NI9" FT /protein_id="CAD67142.1" FT /translation="MYPPRRIEIPCKPGVYRFEDENGRILYVGKAKNLRNRLGSYFTNA FT RRGRRISYMLSISKKVGWTCVADDIEALRLEYSWIKEFAPPCNVKLKDDKAYPFLAVTI FT GEQVPRLLITRRKIQYATHFGPYPKVFHLRETVSLLHKIFQIRTCSPTNYKRAIASGMP FT CFEGQINKCFGPCSLKTTHLQYQKRIKNLMAFLEGQSSSLLESLKKKMLKASKNKEYEE FT AAILRDKIQAAQTVLSRSAVLLDETVSADFIAVVSDNSIASVQCFRVIAGRIKSVYSWH FT FEQQEDQSASELLSQSIIQVYDKLSLPKRIVLFDKPSYLSALSAHLNDKNIDRSLEIEI FT VYHPNEQERRLLETVKDNALSELERHRLRRSSDYTERHRSLFELQKYLNLNSLPVRIEC FT FDISHLSGTNTSGSMVVFENGEPKKSAYRHFNIHIDQNNDTASMFSLICRRLRSLESVA FT QDSPDYPHLMIIDGGKPQLSAAVGALQEVGLKIPVFALSKRLEELWSPGVKTSLILPPN FT SESLFLLQKIRDESHRFALKQQTRRREAYLTSELFRIPGLGKQKVMQLLRRFSSFAEIR FT QASIEDISALPGFGVKTAEKIKECAEAFSLK" FT misc_feature complement(185453..185558) FT /note="UvrB/uvrC motif Score = 30.2 E-value = 3.4e-06" FT misc_feature complement(185873..186125) FT /note="Endo/excinuclease amino terminal domain Score = 75.6 FT E-value = 7.2e-20" FT CDS complement(186167..189013) FT /transl_table=11 FT /gene="uvrA" FT /locus_tag="TW476" FT /product="excinuclease ABC subunit A" FT /note="Similar to Escherichia coli excinuclease ABC subunit FT A UvrA or DinE or b4058 SWALL:UVRA_ECOLI (SWALL:P07671) FT (940 aa) fasta scores: E(): 2e-109, 48.39% id in 965 aa" FT /db_xref="GOA:Q83NI8" FT /db_xref="HSSP:1US8" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004602" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q83NI8" FT /protein_id="CAD67143.1" FT /translation="MSSRRSFLRVKNARVHNLKNLNVRIPRNSMTVFTGLSGSGKSSLA FT FDTIFAEGQRRYIESLSAYARQFLERLDRPEVDSIDGLSPSVAIDQKTTSRNPRSTVGT FT VTEIFDYLRLLWARVGVLHCPECDLPVQKQTIQQIVDSIAKIPHGERFMLLSPLVRQKK FT GEFVDLFSRLTTSGFSRVVVDEEIYLLTEVPKLKKNSRHTIKVVVDRLVSEDNMLTRLT FT DSIETAFGLSNICEVQTFKGDVFRFSINSACPNLHFLNFDKIEPRTFSFNSPVGACPDC FT DGIGTVRSVNMTTLVPDTQLSVEKIALDLIDKKIVSKNFMREMSALARNLKFTLNTPWS FT DLTDYVQNTILHAKNFLLHNTRVRYYTGLVRKIERDVSENSGGSLSGYLYNSPCRSCSG FT KRLRASSLCVKVSNKNIIDVCDMPLDGILHFFKALDIPRKFEKISSPILREIISRLEFL FT IELGLGYLTLSRSITTISGGESQRIRLATQIGSGLTEVLYVLDEPSIGLHKRDNEKLIK FT LLLNLRNRGNTLIVVEHDEETIRSSDWIVDIGPGAGRMGGQVVYSGPVGKMPSRSLTGK FT YLSGELMVSTPKKRRVSSCGITLSGAKENNLKNITVFFPLKTFIVITGVSGSGKSTLVN FT SVLCKALSNICKGNTPSENNCQDADCTDACTVRNGMQHNEQTVRLAPALDGAENISKVV FT HIDQKPIGRTPRSNLATYTGVFDKIRDIFSKTPTARARGYSPGRFSFNLKGGRCEKCKG FT DGCIKIEMNFLPDVYVDCEDCNGMRYNRDTLQVLYNNMSIHDVLTMPVCEAVEFFRAIP FT SIHQPLKLMDEIGLGYMTLGQPAPTLSGGEAQRIKLAAQLQKRTAQDVLYVLDEPTTGL FT HFHDVRQLLEILHRLVDNGNTVIVIEHNLDVIKTADHVIDMGPEGGNAGGSVVACGTPE FT EVALHPDSATGYFLKKCL" FT misc_feature complement(186277..187165) FT /note="ABC transporter Score = 88.6 E-value = 9e-24" FT misc_feature complement(186458..186502) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(187121..187144) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(187363..188932) FT /note="ABC transporter Score = 5.5 E-value = 1.4e-06" FT misc_feature complement(187547..187591) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(188888..188911) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(189025..191058) FT /transl_table=11 FT /gene="uvrB" FT /locus_tag="TW477" FT /product="excinuclease ABC subunit B" FT /note="Similar to Escherichia coli excinuclease ABC subunit FT B UvrB or b0779 or z0998 or ecs0857 SWALL:UVRB_ECOLI FT (SWALL:P07025) (673 aa) fasta scores: E(): 3.1e-133, 55.19% FT id in 674 aa" FT /db_xref="GOA:Q83NI7" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR001943" FT /db_xref="InterPro:IPR004807" FT /db_xref="InterPro:IPR006935" FT /db_xref="InterPro:IPR009055" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/Swiss-Prot:Q83NI7" FT /protein_id="CAD67144.1" FT /translation="MYKNLHPKYFRLAAEYDPSGDQPKAIGELSDRIESGETDIVLLGA FT TGTGKSATIAWLIEKLARPTLIIAHNKTLAAQLANEFRKFFPDNAVEYFVSYYDYYQPE FT AYVPKTDTFIEKDASVNSEVERLRHRATTSLLTRRDVIVVATVSCIYGLGAPSEYLKAG FT FRLEVGQKISQRVLLERFTQLQYNRNDVGFERGNFRVRGDTIEIIPVYEEYTVRIEMWG FT DEIERVLCLHPVTGNLLSEQRGVLIFPASHYVTSSENLKRAIVDIRKELQQRLRYFKRN FT NSLLEAQRLETRTEYDIELMEQLGFCSGIENYSRHIDGRAPGEPPFCLLDYFDDDFLTV FT IDESHVTVPQIGSMHAGDFSRKKALVENGFRLPSAIDNRPLCFDEFRQRVGQVIYLSAT FT PGKYELSKSDGVVEQIIRPTGLVDPKITVKPIKGQIDDLLEEIRKRKLLSERVLVTTLT FT KRMAEELTDFLSEAGVNVSYLHSDIDTLHRVELLTSLRMGRIDVLVGINLLREGLDLPE FT VSLVAILDADKEGFLRSTTSFIQTIGRAARHVSGEVHMYADNMTESMQKSIDETNRRRR FT IQQDYNRKMGVTPVPIKKTVSDITEVLSRPSRKIDCTILDSLPDPKIDGKQIKSHIKSL FT EAKMYMAAESLMFEEAAELRDEIQSLKEKFLKPRGSGGKIRQ" FT misc_feature complement(189069..189174) FT /note="UvrB/uvrC motif Score = 46.8 E-value = 3.3e-11" FT misc_feature complement(189414..189642) FT /note="Helicase conserved C-terminal domain Score = 68.8 FT E-value = 8.3e-18" FT misc_feature complement(190906..190929) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(191051..191791) FT /transl_table=11 FT /gene="coaE" FT /locus_tag="TW478" FT /product="dephospho-CoA kinase" FT /EC_number="2.7.1.24" FT /note="Similar to Bacillus subtilis dephospho-CoA kinase FT CoaE SWALL:COAE_BACSU (SWALL:O34932) (197 aa) fasta scores: FT E(): 1.3e-06, 30.15% id in 199 aa" FT /db_xref="GOA:Q83HP4" FT /db_xref="InterPro:IPR001977" FT /db_xref="UniProtKB/TrEMBL:Q83HP4" FT /protein_id="CAD67145.1" FT /translation="MVMQLFALTGGIAAGKSCVAGLLSEFGLRVVSADSLVEVLYRTDV FT RLIEEIKGRFLCNDEKSLSELVFSDSRARRVLNQLTHQRVNRLALDYFWQLRNEPVVIY FT EIPILESTSPFVGFAPGECGVFASGKIQHSGVLFVHSDCESRIDRLMKRNNLNRIQALQ FT RIHSQTPYMPQYSLRAGDLLRTGDLSHDFREERAPHKGVKVYSVHTSGVSKTLCMIQNT FT SDFSHLRQCVASVFQIMKTIDRSV" FT misc_feature complement(191224..191782) FT /note="Dephospho-CoA kinase Score = 26.4 E-value = 1.2e-13" FT misc_feature complement(191741..191764) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(191795..193216) FT /transl_table=11 FT /gene="rpsA" FT /locus_tag="TW479" FT /product="30s ribosomal protein S1" FT /note="Similar to Escherichia coli 30s ribosomal protein S1 FT RpsA or SsyF or b0911 or z1257 or ecs0994 SWALL:RS1_ECOLI FT (SWALL:P02349) (557 aa) fasta scores: E(): 2.4e-47, 42.69% FT id in 349 aa, and to Streptomyces coelicolor 30s ribosomal FT protein S1 RpsA or SCO1998 or SC7H2.12c SWALL:Q9S2K5 FT (EMBL:AL109732) (502 aa) fasta scores: E(): 3.1e-103, FT 58.33% id in 468 aa" FT /db_xref="GOA:Q83HP3" FT /db_xref="HSSP:1SRO" FT /db_xref="InterPro:IPR000110" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:Q83HP3" FT /protein_id="CAD67146.1" FT /translation="MNMKVIDELSSEDLLLSEIDKTVKSFSDGDIVVGTVVRVYRDEVL FT VDVGYKTEGVIPVKELSLRADVDPNELLEVGSTVEALVFQKEDSQGRLILSKKRAQYEK FT AWSDLEKIKDSDLTVTGKVIEIVRGGLIVDIGLRGFLPASLIDIRRVRDLSSYLGMEIE FT AKVLELDRQRNNVVLSRRVLLEQNQSEARTSLFGNLHKGQVRKGTVSSIVSFGAFVDLG FT GIDGLVHISEISWKHVTQPSEVLKVGEEVTVEILEVDSERHRVSLSLRATQEDPWQVFA FT HDHAIGQIMPGVVTKVMNFGVFVRLAEDVEGLAHVSELLDSSLESTEDVFSPGDEVFVK FT IVDIDIDSRRISLSLKQATAALTLDSKGFDPALYGMLAEYDDDGNYKYPEGFDPEANQW FT KEGFEEEKARWEQGYAVARDVWHAHTVFVSEFQKKLEALSVSNAPETLPSAESVSAIDS FT DTTNSPESAKGSEQD" FT misc_feature complement(192151..192370) FT /note="S1 RNA binding domain Score = 80.0 E-value = FT 3.3e-21" FT misc_feature complement(192409..192625) FT /note="S1 RNA binding domain Score = 116.2 E-value = FT 4.5e-32" FT misc_feature complement(192676..192883) FT /note="S1 RNA binding domain Score = 62.7 E-value = FT 5.5e-16" FT misc_feature complement(192925..193144) FT /note="S1 RNA binding domain Score = 60.0 E-value = FT 3.6e-15" FT CDS complement(193394..194464) FT /transl_table=11 FT /gene="polA" FT /locus_tag="TW480" FT /product="DNA polymerase I" FT /EC_number="2.7.7.7" FT /note="Similar to Mycobacterium tuberculosis DNA polymerase FT I PolA or Rv1629 or mt1665 or mtcy01b2.21 SWALL:DPO1_MYCTU FT (SWALL:Q07700) (904 aa) fasta scores: E(): 1.4e-36, 42.91% FT id in 268 aa" FT /db_xref="GOA:Q83HP2" FT /db_xref="HSSP:1TAQ" FT /db_xref="InterPro:IPR002421" FT /db_xref="InterPro:IPR008918" FT /db_xref="InterPro:IPR020045" FT /db_xref="InterPro:IPR020046" FT /db_xref="InterPro:IPR020047" FT /db_xref="UniProtKB/TrEMBL:Q83HP2" FT /protein_id="CAD67147.1" FT /translation="MTGTPDQSKRLILVDGHSLAFRSFYGTKAIAVVNGVQVNALYGFV FT NRLTQLLESGPVSHFAVAFDVSRKSFRTEAYPEYKGTRKKVPEEFFPQVDLIKEFLHLI FT GVNHFAVQNYEADDIIATLSRLALEEGFSDVRILSGDRDLIQLVNNKVSLLFFSAKHRL FT GFAVYTPEAVMDRYGIEPHVYPDMAALVGESSDNLPGIKKIGEKTATTLLQKYGCLQKI FT IESRWEISGVVGQNIRNDYHVALRNRKLNTLVNDLPLPASVSDLSLSGEIDTKKLEGFL FT RRYRMNSITPRLLRCLQKFTNAANLNRALTASPQRRGSPSIRKYNSKTQKPVRNNRVSG FT VRRRRYRADRTSVQLF" FT misc_feature complement(193633..193930) FT /note="5'-3' exonuclease, C-terminal SAM fold Score = 85.8 FT E-value = 6.1e-23" FT misc_feature complement(193936..194440) FT /note="5'-3' exonuclease, N-terminal resolvase-like domain FT Score = 213.0 E-value = 3.2e-61" FT CDS complement(194480..195088) FT /transl_table=11 FT /locus_tag="TW481" FT /product="putative two-component system response regulator" FT /note="Similar to Streptomyces coelicolor putative response FT regulator SCO2013 or SC7H2.27c SWALL:Q9S2J0 (EMBL:AL109732) FT (218 aa) fasta scores: E(): 3.7e-35, 53.51% id in 185 aa, FT and to Streptomyces coelicolor AbsA2 or SCO3226 or SCE8.19 FT SWALL:Q53894 (EMBL:U51332) (222 aa) fasta scores: E(): FT 7.4e-11, 43.47% id in 115 aa, and to Bacillus subtilis FT chemotaxis protein CheY homolog or CheB SWALL:CHEY_BACSU FT (SWALL:P24072) (119 aa) fasta scores: E(): 1.2e-10, 38.59% FT id in 114 aa" FT /db_xref="GOA:Q83NI6" FT /db_xref="HSSP:1TMY" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR005561" FT /db_xref="InterPro:IPR008327" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q83NI6" FT /protein_id="CAD67148.1" FT /translation="MMRNESFPLQTADLSPCAVVAEDESIIRMDINDIMSDAGYKVVAE FT AGDGETAVALTLEHNPDIVVMDIKMPFMDGITAAEKISSRSAVVLLTAFNQQELVERAV FT DAGVMAYVSKPFSRGNLIPAVAVALERFRKINSLQKQLDDASTHLEIRKLTDHAKGLLC FT KHMGLSEPEAFRWIQKMSMNRRISMKEVSKSIIAQLAGK" FT misc_feature complement(194503..194668) FT /note="ANTAR domain Score = 66.3 E-value = 4.7e-17" FT misc_feature complement(194692..195043) FT /note="Response regulator receiver domain Score = 108.9 FT E-value = 7.1e-30" FT tRNA 195126..195211 FT /note="tRNA Leu anticodon CAA, Cove score 62.38" FT CDS complement(195320..196735) FT /transl_table=11 FT /gene="pyk" FT /locus_tag="TW482" FT /product="pyruvate kinase" FT /EC_number="2.7.1.40" FT /note="Similar to Corynebacterium glutamicum pyruvate FT kinase Pyk or cgl2089 SWALL:KPYK_CORGL (SWALL:Q46078) (475 FT aa) fasta scores: E(): 1.1e-83, 50.63% id in 470 aa" FT /db_xref="GOA:Q83HP1" FT /db_xref="HSSP:1E0T" FT /db_xref="InterPro:IPR001697" FT /db_xref="InterPro:IPR011037" FT /db_xref="InterPro:IPR015793" FT /db_xref="InterPro:IPR015794" FT /db_xref="InterPro:IPR015795" FT /db_xref="InterPro:IPR015813" FT /db_xref="InterPro:IPR018209" FT /db_xref="UniProtKB/TrEMBL:Q83HP1" FT /protein_id="CAD67149.1" FT /translation="MRRAKIVVTLGPAVSDLDSVRDLISAGADVFRMNLSHGSLDFHRE FT VFLNVRTAAAELDRHIAIFADLQGPKIRLGRFASGPYTLQEGDIFTITTEQVLGTKELS FT STTLPTLPDNVSEGDLLLIDDGKVALRAIGNDGVRITTRVEVPGKVSNNKGINLPGVGV FT KVPALSEKDIDSLRWALSLPVDMIALSFVRCASDVDAVHKVMDEEGIRLPVIAKIEKPQ FT AVSAIEEIALRFDAIMVARGDLGVELPLEDVPVAQKEIVKVARRFARPVIIATQMLESM FT ISSSRPTRAEASDVANAVLDGADALMLSGETSVGEWPVEAVRVMSRVIEKTEEKAISQI FT VGFGTTPKTQGGALAWAAAKVAEFIDARYLCVFSESGDSIRRVSRLRHDIPIIGFSPVE FT SVVRQVSLSWGVRCFLIERLHQTDQMMRKAEHVLLTNNLAEIGEKIVIISGSPVGVPGS FT TNHMRIHELGSTS" FT misc_feature complement(195340..195679) FT /note="Pyruvate kinase, alpha/beta domain Score = 28.6 FT E-value = 7.4e-08" FT misc_feature complement(195709..196735) FT /note="Pyruvate kinase, barrel domain Score = 454.1 E-value FT = 8.5e-134" FT misc_feature complement(196064..196102) FT /note="PS00110 Pyruvate kinase active site signature." FT tRNA complement(196790..196861) FT /note="tRNA Arg anticodon CCT, Cove score 64.16" FT CDS complement(196865..197758) FT /transl_table=11 FT /locus_tag="TW483" FT /product="NLP/P60-family protein" FT /note="C-terminal region similar to those from proteins of FT undefined function eg. Clostridium acetobutylicum starch FT degrading enzyme precursor SWALL:Q45834 (EMBL:X70334) (503 FT aa) fasta scores: E(): 2.7e-11, 38.51% id in 148 aa" FT /db_xref="InterPro:IPR000064" FT /db_xref="UniProtKB/TrEMBL:Q83NI5" FT /protein_id="CAD67150.1" FT /translation="MARLHYLLIRKGVCVLHLNPLLPTHPFAAHIPFFLCQACCITCFV FT LRSYCFACSLALSRFLGGYLTAVSIRSSFPSRDDRYSRYVPSVGARRRGLLRRSEGRSA FT PMASLAVVFISIAVSTVTMPVYAVDTYSVASNPYEVQAVQVGGAHTLPALNGDAYSVVR FT RGVSSYRPAVFGLSAALVPVPYTPSSVLDVASEYVGVPYRFGGADPSYGFDCSGLVKYV FT FARFGIALPHSVSGQAAAGRIVPRSQARPGDLVFMPGHNGFYVGPGLILHAPDYGRSVR FT VARIWTDNYYIVRVGG" FT misc_feature complement(196876..197179) FT /note="NLP/P60 family Score = 123.3 E-value = 3.1e-34" FT tRNA complement(197849..197921) FT /note="tRNA Asn anticodon GTT, Cove score 73.50" FT CDS complement(198062..199873) FT /transl_table=11 FT /gene="dnaG" FT /locus_tag="TW484" FT /product="DNA primase" FT /EC_number="2.7.7.-" FT /note="Similar to Mycobacterium smegmatis DNA primase DnaG FT SWALL:PRIM_MYCSM (SWALL:O52200) (636 aa) fasta scores: E(): FT 1.1e-43, 36.34% id in 630 aa, and to Escherichia coli DNA FT primase DnaG or DnaP or ParB or b3066 or z4419 or ecs3949 FT SWALL:PRIM_ECOLI (SWALL:P02923) (581 aa) fasta scores: E(): FT 5.1e-37, 34.7% id in 438 aa" FT /db_xref="GOA:Q83HP0" FT /db_xref="HSSP:1D0Q" FT /db_xref="InterPro:IPR002694" FT /db_xref="InterPro:IPR006154" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR006295" FT /db_xref="InterPro:IPR013264" FT /db_xref="InterPro:IPR019475" FT /db_xref="UniProtKB/TrEMBL:Q83HP0" FT /protein_id="CAD67151.1" FT /translation="MSKIKQEVIHEIKERANIREIIGEYTNLKRQSAGAYAGLCPFHSE FT RTPSFHVRETGLYHCFGCGKGGDVISFVQEIEGLNFVDAVEQLARTLGITIVYYEGDST FT PDSRSNLLAACKSAAEFYSEQLLSSTPAVTFLKSRGFDRDLCERYQIGFSPTNSGDLYK FT HLRDKGFTLQQAVAAGLLNPSGMDRFRARIVWPVKDVTGNIVGFGARKLAEDAQGPKYI FT NSPESSLYKKNSLLYGFDVAKKAISKKDRVVIVEGYTDVMSCHQSGIDEAVATCGTSWG FT IGHMRLIKRMLSDSGVLIFAFDGDQAGQHAIMRAFKDSPEIAARSYAAIFPKGLDPCEL FT RIKNGAQAVIDLVERAIPLYEFVINHQLSKCPLGTFPERRAALAKILPFLKEISDRILR FT DHYTGLVCSRLGIDREQVDLLLPKLEHISSRFHPSKIPWQEDWKKKEFAAPTNPPDARF FT ALEQQVIKSLLQYQHLLERDTAIAMCDYSFHNPTLSFIAQMIGMVIREQNRSISPAEFS FT KLIHSTVPSEYHATLQALEVLPVPVSPDKLDSYLEGLVRSFENQHLLEEKALLLRQLSS FT EKSLEKSLELRQRIVELEKQRNSLLPD" FT misc_feature complement(198880..199126) FT /note="Toprim domain Score = 49.3 E-value = 6e-12" FT misc_feature complement(199573..199864) FT /note="CHC2 zinc finger Score = 166.6 E-value = 2.9e-47" FT CDS complement(199870..201309) FT /transl_table=11 FT /gene="dgt" FT /locus_tag="TW485" FT /product="deoxyguanosinetriphosphate triphosphohydrolase" FT /EC_number="3.1.5.1" FT /note="Similar to Escherichia coli FT deoxyguanosinetriphosphate triphosphohydrolase Dgt or b0160 FT SWALL:DGTP_ECOLI (SWALL:P15723) (504 aa) fasta scores: E(): FT 0.016, 26.32% id in 452 aa, and to Mycobacterium smegmatis FT deoxyguanosinetriphosphate triphosphohydrolase-like protein FT Dgt SWALL:DGT1_MYCSM (SWALL:O52199) (428 aa) fasta scores: FT E(): 2.9e-33, 42.72% id in 440 aa" FT /db_xref="GOA:Q83HN9" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006261" FT /db_xref="InterPro:IPR006674" FT /db_xref="UniProtKB/TrEMBL:Q83HN9" FT /protein_id="CAD67152.1" FT /translation="MTLLTCKTFRARCSYTSHMKQFTYNDFDRERLYPEKTENIRDSFT FT RDRARVVHAAYMRRLADKTQVYSPLLHLTTVRNRLTHSVEVAQIGMDIAHLIGVNQNIV FT DTACLAHDIGHPPFGHNGERVLNKWACGIGGFEGNAQTFRVITRLEPKVYAPDTRRSFG FT LNLTRASLNAVCKYPWSLKDARRFCIATKETTGLQNLLCDCDAVHKFGFYEEDRETFSW FT VRKLSRAHILSIEAQIMDFADDVAYSVHDFEDSLLLERNLHSVLRSQNLPHQIQRFMTE FT TFSCEIADKADEAFSNLSEMWRDLSRNIAFGSLHNKYLTGISMRGFLARLKNLTSNLIG FT RFAYAAIERTRESLVERDRSDAQLVVPNTTLAEIALLKSMVFVCVMQKRKQFYVLQAKA FT LLRLVEKIWELACKDAYALDDLFREDWELAKCEAEKRRVVLDQIASLTDLDALLLMQRY FT CSESDAVREFLMKSESARSQL" FT misc_feature complement(200568..201075) FT /note="HD domain Score = 42.6 E-value = 6.1e-10" FT CDS complement(201319..202068) FT /transl_table=11 FT /gene="uppS2" FT /locus_tag="TW486" FT /product="undecaprenyl pyrophosphate synthetase" FT /EC_number="2.5.1.31" FT /note="Similar to Mycobacterium tuberculosis undecaprenyl FT pyrophosphate synthetase UppS or Rv2361c or mt2430 or FT mtcy27.19 SWALL:UPPS_MYCTU (SWALL:O05837) (296 aa) fasta FT scores: E(): 2.8e-53, 54.89% id in 235 aa, and to FT Micrococcus luteus undecaprenyl pyrophosphate synthetase FT UppS SWALL:UPPS_MICLU (SWALL:O82827) (249 aa) fasta scores: FT E(): 1.8e-33, 38.03% id in 234 aa" FT /db_xref="GOA:Q83HN8" FT /db_xref="InterPro:IPR001441" FT /db_xref="InterPro:IPR018520" FT /db_xref="UniProtKB/Swiss-Prot:Q83HN8" FT /protein_id="CAD67153.1" FT /translation="MEIFSVDWTGQTPPHIPRKSLPRHVAVVMDGNGRWANQRNLPRIE FT GHKAGESALIDVVAGAVQVGVPYLSLYVFSTENWLRAPDEVRFLLRFTRDVIARRRELF FT AHWGVRVRWSGVPNRLGKVLVKELRDTEEITKKNTAMNLNVCLNYGSRQEIVNAIKSIV FT SDVNSGLISAKSVNEKIISRRMYMPDFPDVDLFLRSSGENRMSNFMLWQSAYAELIFMS FT KLWPDFRRDDFWAALRAYSGRSRRFGR" FT misc_feature complement(201324..201987) FT /note="Putative undecaprenyl diphosphate synthase Score = FT 348.9 E-value = 4e-102" FT CDS complement(202096..202839) FT /transl_table=11 FT /gene="recO" FT /locus_tag="TW487" FT /product="DNA repair protein RecO" FT /note="Similar to Escherichia coli DNA repair protein RecO FT or b2565 or z3846 or ecs3431 SWALL:RECO_ECOLI FT (SWALL:P15027) (242 aa) fasta scores: E(): 0.051, 26.27% id FT in 236 aa, and to Streptomyces coelicolor DNA repair FT protein RecO or SCO2510 or SCC121.13c SWALL:RECO_STRCO FT (SWALL:Q9L2H3) (251 aa) fasta scores: E(): 9.8e-24, 38.36% FT id in 245 aa" FT /db_xref="GOA:Q83NI4" FT /db_xref="InterPro:IPR003717" FT /db_xref="UniProtKB/TrEMBL:Q83NI4" FT /protein_id="CAD67154.1" FT /translation="MCKNWDVSGHYRDRAIVLRTKPLGEADRIITLFTRSNGTSDFVAK FT GIRRPKSRFGSSLEPFTVIDAFLYIGRGMDGVSQAEILASYGSRLVKSTESYIAANVIA FT ETGRRLGIAGGSVQQFDLLHGAFSALSRGISSPEAICSSYLLRSMSAAGWRPALENCAK FT CLLPLVEYTIDISAGGLVCTSCSEHPVVNNKLCEYLLALREGDWPYINESDESLRGQAR FT NFVFEYTQWHIDHPLKSLKIVAKSW" FT misc_feature complement(202101..202818) FT /note="Recombination protein O Score = 69.2 E-value = FT 6.2e-18" FT CDS complement(202847..203752) FT /transl_table=11 FT /gene="era" FT /locus_tag="TW488" FT /product="GTP-binding protein" FT /note="Similar to Streptococcus gordonii Challis FT GTP-binding protein Era or Sgg SWALL:ERA_STRGC FT (SWALL:O24756) (299 aa) fasta scores: E(): 2e-31, 38.81% id FT in 286 aa" FT /db_xref="GOA:Q83NI3" FT /db_xref="HSSP:1MKY" FT /db_xref="InterPro:IPR002917" FT /db_xref="InterPro:IPR004044" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR005662" FT /db_xref="InterPro:IPR009019" FT /db_xref="InterPro:IPR015946" FT /db_xref="UniProtKB/Swiss-Prot:Q83NI3" FT /protein_id="CAD67155.1" FT /translation="MVVSRSPGGYRSGIITLVGRPNVGKSTLINSLVGEHLSITSDKPQ FT TTRRIIRGVISRMNAQIAITDTPGIHKPKTPFGKGLNEMTTCALSASDSIGICLPVNQK FT IGSGDRFILDKVEAIGPYKKIAIVTKIDRVEKRDLLLKLSEISDLGCNFAAVVPVSAKR FT AVQIDLLKDVFFENCLNFSEKLFFDHEKPSVSDQISELIREKALCLLEQEIPHSLLVEV FT EEILTDSNRVFIHANLYVERNSQKMIVLGKGGRTIKNISITSRLAIESFLGKKVYLRLI FT VKVVKNWQKSESFLGKIYLS" FT misc_feature complement(203675..203698) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(203739..204254) FT /transl_table=11 FT /locus_tag="TW489" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT Ml0628 or b1937_f1_21 SWALL:YN67_MYCLE (SWALL:Q49752) (178 FT aa) fasta scores: E(): 3.3e-15, 35.61% id in 146 aa" FT /db_xref="GOA:Q83HN7" FT /db_xref="InterPro:IPR002036" FT /db_xref="InterPro:IPR020549" FT /db_xref="UniProtKB/Swiss-Prot:Q83HN7" FT /protein_id="CAD67156.1" FT /translation="MTGLLYLQNSSGYNDCYFKTESLVDFLYRTLFIDKGSYLGVSFIT FT AAEMRDLKIKHFGVNEDSDVLSFPIDEIAPGSENSLVYGVLGDIVVCPETVMRQAVRHP FT FEHEIYLLVVHGFLHLLGFDHSDAPSKKEMFSLQAKLIEDFFALENLGTPSEEITITPD FT LRPSLGRI" FT misc_feature complement(203828..204125) FT /note="Uncharacterized protein family UPF0054 Score = 89.1 FT E-value = 6.4e-24" FT misc_feature complement(203880..203912) FT /note="PS01306 Uncharacterized protein family UPF0054 FT signature." FT CDS complement(204251..204574) FT /transl_table=11 FT /locus_tag="TW490" FT /product="conserved hypothetical protein" FT /note="Similar to Synechocystis sp. hypothetical hit-like FT protein Slr1234 SWALL:YHIT_SYNY3 (SWALL:P73481) (114 aa) FT fasta scores: E(): 6.7e-15, 43.13% id in 102 aa" FT /db_xref="GOA:Q83HN6" FT /db_xref="HSSP:1KPF" FT /db_xref="InterPro:IPR001310" FT /db_xref="InterPro:IPR011146" FT /db_xref="InterPro:IPR011151" FT /db_xref="UniProtKB/TrEMBL:Q83HN6" FT /protein_id="CAD67157.1" FT /translation="MTSVFTRIINREVPAEILFEDDEFICIEDIAPKAKIHYLVIAKHP FT WKDVTEAVRDDPLFVNKILAIAVRLTKDFGSQFRLIFNTGALVGQTVFHVHAHILSGEA FT LGE" FT misc_feature complement(204256..204574) FT /note="HIT family Score = 81.1 E-value = 1.6e-21" FT CDS complement(204610..205317) FT /transl_table=11 FT /locus_tag="TW491" FT /product="conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT protein Rv2372c or mt2441 or mtcy27.08 SWALL:YN72_MYCTU FT (SWALL:O05826) (262 aa) fasta scores: E(): 9.5e-16, 30.24% FT id in 248 aa" FT /db_xref="GOA:Q83HN5" FT /db_xref="HSSP:1VHY" FT /db_xref="InterPro:IPR006700" FT /db_xref="InterPro:IPR015947" FT /db_xref="UniProtKB/TrEMBL:Q83HN5" FT /protein_id="CAD67158.1" FT /translation="MSGFFIAENLSELSEGDTVFLSDREQRHACLSRRIRVGEEIGLTD FT TMGRTANARVTVSSQPGTITARIMNLTLHKPNRVTVSLLQALCRRASAESAVRSAVELG FT VDRIVPWKSDRSFNSSSRRWSSIAREAAKQSRRAWFPVVKADIPSERLVEEIGDSLAII FT LDPGSNTRLSSLGNLFLQRKSVFLLIGPEGGITREEISTIPGICCSLGIETLKSSTASV FT AALSLVNFFLGRW" FT misc_feature complement(204633..204945) FT /note="Protein of unknown function (DUF558) Score = 66.2 FT E-value = 5e-17" FT CDS complement(205351..206397) FT /transl_table=11 FT /gene="dnaJ1" FT /locus_tag="TW492" FT /product="chaperone protein DnaJ" FT /note="Similar to Escherichia coli chaperone protein DnaJ FT or GroP or b0015 SWALL:DNAJ_ECOLI (SWALL:P08622) (375 aa) FT fasta scores: E(): 1.7e-31, 34.85% id in 373 aa" FT /db_xref="GOA:Q83NI2" FT /db_xref="InterPro:IPR001305" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR002939" FT /db_xref="InterPro:IPR003095" FT /db_xref="InterPro:IPR008971" FT /db_xref="InterPro:IPR015609" FT /db_xref="InterPro:IPR018253" FT /db_xref="UniProtKB/Swiss-Prot:Q83NI2" FT /protein_id="CAD67159.1" FT /translation="MEDLYGILGVDHDASVDEIRRAYRRLARELHPDINPDSADRFKAV FT THAYNILSDPEQRQRYDRHVSGGFSSDFNLSDLFQSFFDTSAEFQRGSDLLVNIDIDLK FT TAIYGGSQVVKIDSLVVCDVCNGTRSEPGYKAEVCFDCNGSGVVRGEVRTTLGNLITQN FT TCSKCRGNGERIDHPCRRCYGNGSRSAPRDITINIPPGVETGMRIKIPNMGNAGGAMPG FT DLYVDCKVKEHPYFLRDGQDLYCRLDISLVDALLGTKVKIDSLDGELAVVIPALSQNRD FT VIRIANKGAVTLRGGKGDLCIVLNVLLMQKLDPEHRALLKKIMPNPPKPKLAKRTSGFF FT SWLKNKFT" FT misc_feature complement(205428..205782) FT /note="DnaJ C terminal region Score = 120.5 E-value = FT 2.2e-33" FT misc_feature complement(205821..206073) FT /note="DnaJ central domain (4 repeats) Score = 65.4 E-value FT = 8.5e-17" FT misc_feature complement(206205..206307) FT /note="DnaJ domain Score = 8.5 E-value = 8e-05" FT misc_feature complement(206215..206274) FT /note="PS00636 Nt-dnaJ domain signature." FT CDS complement(206842..207444) FT /transl_table=11 FT /locus_tag="TW493" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR018960" FT /db_xref="UniProtKB/TrEMBL:Q83HN4" FT /protein_id="CAD67160.1" FT /translation="MSRASAKSFRFAPAQYPCVGVTDCLGSPKYVPSGYRLVEASVSLG FT SGDKRFFSSRELLMCWKVHRLAGLNVRVLDPGEVDCLGGSPILRDKERILDESGFDFAR FT PGCIVALRSGLRRVRSVMRVVYAVSDVNRVALILASIVGHGLHLEEGFFIEKHPDSSVR FT FTVRILRRASCVSWITMNASKHLVSRYLRVLDPTWAL" FT CDS complement(207458..209263) FT /transl_table=11 FT /gene="lepA" FT /locus_tag="TW494" FT /product="GTP-binding protein LepA" FT /note="Similar to Escherichia coli GTP-binding protein LepA FT or b2569 or z3851 or ecs3435 SWALL:LEPA_ECOLI FT (SWALL:P07682) (599 aa) fasta scores: E(): 5.7e-114, 49.83% FT id in 592 aa" FT /db_xref="GOA:Q83NI1" FT /db_xref="InterPro:IPR000640" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006297" FT /db_xref="InterPro:IPR009022" FT /db_xref="InterPro:IPR013842" FT /db_xref="UniProtKB/Swiss-Prot:Q83NI1" FT /protein_id="CAD67161.1" FT /translation="MTDRVLPEQIRNFGIIAHVDHGKSTLADRILQLTGAVSDRDMREQ FT YLDRLYIERERGITIKSQAVTLQWDCDATQYVLNMVDTPGHVDFTYEVSRSLAACEAAV FT ILVDATQGVEAQTLANLHLAIENNLLIIPVLSKVDLPSADVEGATLELSEVLECRVEDV FT MHVSGKTGYGVKELLDLIVRKAPPPKGDVTSAPRALIFDSIYDSYRGVVTYVKMCDGTI FT RVGDKIRMMSTGAEHTLLEVGVSNPEPQSRHSLSVGEVGYFITGVKDVRKSRVGDTITT FT DTHTATVPLPGYSNPKPMVFSGIYPLNGNEYSALREGLDRLKLSDASIVYTPETSAALG FT FGFRCGFLGLLHMEIVSERLNREFGLATISTAPSVAYEITPDGEKTLVVMNPSDFPSGK FT IKEIKEPTVKVSILSPKEYIGSIMELCQARRGVMQGIEYFGSVRAELIYVMPLAEIVFD FT FFDSLKSRTKGYASFDYNPEGSQPADLVKVDILLQGNKVDAFSAIVHSSKAYSYGSSIS FT KRLSELIPRQQFEVPIQAAIGSRVVARETIRAVRKDVVAKCYGGDITRKRKLLERQKQG FT KARMKLIGRVEVPQEVFVATLSSYK" FT misc_feature complement(207793..208060) FT /note="Elongation factor G C-terminus Score = 129.1 E-value FT = 5.8e-36" FT misc_feature complement(208426..208672) FT /note="Elongation factor Tu domain 2 Score = 51.2 E-value = FT 1.6e-12" FT misc_feature complement(208699..209242) FT /note="Elongation factor Tu GTP binding domain Score = FT 222.4 E-value = 4.7e-64" FT misc_feature complement(209075..209122) FT /note="PS00301 GTP-binding elongation factors signature." FT misc_feature complement(209192..209215) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 209550..209837 FT /transl_table=11 FT /gene="rpsT" FT /locus_tag="TW495" FT /product="30s ribosomal protein S20" FT /note="Similar to Escherichia coli 30s ribosomal protein FT S20 RpsT or b0023 or z0027 or ecs0026 SWALL:RS20_ECOLI FT (SWALL:P02378) (86 aa) fasta scores: E(): 0.0017, 34.14% id FT in 82 aa, and to Streptomyces coelicolor 30s ribosomal FT protein S20 RpsT or SCO2563 or SCC123.01 SWALL:RS20_STRCO FT (SWALL:Q9RDM3) (88 aa) fasta scores: E(): 1.7e-14, 62.06% FT id in 87 aa" FT /db_xref="GOA:Q83HN3" FT /db_xref="InterPro:IPR002583" FT /db_xref="UniProtKB/Swiss-Prot:Q83HN3" FT /protein_id="CAD67162.1" FT /translation="MANIKSQIKRNRTNENNRLRNKAVKSELKTLIRLVKRAARDNDLP FT RAEDALRRASLKLDRAVSKGVIHPNQAANRKSGIAKLVVATRLRNSTAGE" FT misc_feature 209553..209802 FT /note="Ribosomal protein S20 Score = 100.1 E-value = 3e-27" FT CDS complement(209898..212120) FT /transl_table=11 FT /gene="relA" FT /locus_tag="TW496" FT /product="GTP pyrophosphokinase" FT /EC_number="2.7.6.5" FT /note="Similar to Corynebacterium glutamicum GTP FT pyrophosphokinase RelA or cgl1653 SWALL:RELA_CORGL FT (SWALL:O87331) (760 aa) fasta scores: E(): 2e-124, 43.98% FT id in 732 aa, and to Escherichia coli GTP pyrophosphokinase FT RelA or b2784 or z4099 or ecs3644 SWALL:RELA_ECOLI FT (SWALL:P11585) (744 aa) fasta scores: E(): 3.3e-79, 34.23% FT id in 739 aa" FT /db_xref="GOA:Q83HN2" FT /db_xref="InterPro:IPR002912" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR004095" FT /db_xref="InterPro:IPR004811" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR007685" FT /db_xref="InterPro:IPR012676" FT /db_xref="UniProtKB/TrEMBL:Q83HN2" FT /protein_id="CAD67163.1" FT /translation="MHRSFVMKIANISLFSRLFSQYRTTGIDNILKVIAKHHPKADLSG FT VTLAYKIASECHKGQKRYSGEEYISHPVAVAEILSDLGMGPNGVSAGLLHDTVEDTDFT FT IDQVSETFGQEVALLVDGVTKLDRMKYGVNVQSESWRKMIVAISKDIRVLVIKLADRLH FT NARTWGFVPIESAKRKARETLEIYAPLSGRLGIQNIKTELEDLSFMVLEPKIYQEILEL FT VNKRSPRREKLINEVRSGIDDELKLLRIRGKVSGRPKEIYSIYQKMVLRGHSFSDIQDL FT VAFRIVVPTLRDCYAVLGSMHTRWTPMQGRFKDYIATPKSNFYQSIHTTVMLDGGFPVE FT IQIRTPEMHRQAEFGIAAHWKYKEKLRSPTVAFRKTAALDHESVYISRIADWQESSDSN FT ELLENMRYELSVKDIYVFTPAGKLVGLPAGSTPVDFAYAVHTEVGHRTVGAKVNSSMVS FT LDTPLSTGDVVEVLTIKSANYSPNKNWLEFVKSTRARNKIKSFFTKSRREEAIELGKNA FT LLKCFRKRNVSVKYIQKRLPELLSSLRFSDINDVYRAVGEGRLKALTVVDTLSKLIHDT FT VEDETSPIQVIRTDKPANEPSVLVRGIHDILVRLARCCTPVPGDEIIGYVTRGTGVSVH FT IMTCGNISHMPEKDSRLVKVEWSRSAQTKPFRVSIQIDGLNRPDLINDITKVFSEYRIN FT ILSANLSTNQHRASNKFVCEAYDVSRLEKVMSEIRKIDSVYDCYRA" FT misc_feature complement(209903..210119) FT /note="ACT domain Score = 39.8 E-value = 4.3e-09" FT misc_feature complement(210704..210893) FT /note="TGS domain Score = 98.2 E-value = 1.2e-26" FT misc_feature complement(211025..211355) FT /note="Region found in RelA / SpoT proteins Score = 218.6 FT E-value = 6.5e-63" FT misc_feature complement(211628..211919) FT /note="HD domain Score = 34.8 E-value = 1.4e-07" FT CDS complement(212344..212976) FT /transl_table=11 FT /locus_tag="TW497" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR000601" FT /db_xref="UniProtKB/TrEMBL:Q83HN1" FT /protein_id="CAD67164.1" FT /translation="MKHPRPNRGGHGRKRVGSVSPSRVKPDWHYVRGTDTLCAPGTWGC FT APLGNDKPPGKTPVRKPIKRSISIRDLYDQKRIAPPPPTISVKPYALVRRPVDITAIAR FT SRSGTFNLLGDDFDVRIYPVRYSWTYGDGYSDVSYTNRASHVYGQVGNRIVTLRVFYRA FT KVNWGTGWEPAIGEIFLDAQPRNIDVFGWKISLFADNCYTNPFGQGC" FT CDS complement(213313..214281) FT /transl_table=11 FT /gene="secF" FT /locus_tag="TW498" FT /product="protein-export membrane protein SecF" FT /note="Similar to Streptomyces coelicolor protein-export FT membrane protein SecF or SCO1515 or SCL2.05c FT SWALL:SECF_STRCO (SWALL:Q53956) (373 aa) fasta scores: E(): FT 2.7e-43, 42.15% id in 325 aa, and to Escherichia coli FT protein-export membrane protein SecF or b0409 or z0508 or FT ecs0460 SWALL:SECF_ECOLI (SWALL:P19674) (323 aa) fasta FT scores: E(): 4.9e-19, 29.41% id in 323 aa" FT /db_xref="GOA:Q83NI0" FT /db_xref="InterPro:IPR003335" FT /db_xref="InterPro:IPR005665" FT /db_xref="UniProtKB/TrEMBL:Q83NI0" FT /protein_id="CAD67165.1" FT /translation="MAWFARFSDDLYSGRRSIDFVGRYKIWYSASFVILLVAILGPFFH FT GGYKFGIEFTGGSQFVISDVKQKSIELAREVVKKTVDKPSVVTTFGKGLVVRTDQLSDT FT QSNSVRDALADTYGVSHDAVAASYIGPSWGQDVTRQGIQGLVIFLLLVFVVMALYFRTW FT RMSLSAIIALFHDLIITAGIYGLLGLEITPAAVIGLLTILGYSLYDTVVVFDRVRENRA FT LDPTCSDYKGIVNRAVNQTFVRSINTSLIAVLPVASILFIGSLILGASTLSDISVALFI FT GMLAGAYSTIVIASPTYALLCKKLPSGKEKRLRKAPVKAPG" FT misc_feature complement(213372..214173) FT /note="Protein export membrane protein Score = 270.2 FT E-value = 1.9e-78" FT misc_feature complement(order(213376..213444,213472..213540, FT 213640..213708,213721..213789,213802..213861, FT 214138..214206)) FT /note="6 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 26-48, 141-160, 165-187, FT 192-214, 248-270 and 280-302" FT CDS complement(214281..215903) FT /transl_table=11 FT /gene="secD" FT /locus_tag="TW499" FT /product="protein-export membrane protein SecD" FT /note="Similar to Streptomyces coelicolor protein-export FT membrane protein SecD or SCO1516 or SCL2.06c FT SWALL:SECD_STRCO (SWALL:Q53955) (570 aa) fasta scores: E(): FT 3e-52, 40.21% id in 552 aa, and to Corynebacterium FT glutamicum SecD SWALL:Q9AE07 (EMBL:AF038651) (637 aa) fasta FT scores: E(): 7.8e-32, 31.01% id in 590 aa" FT /db_xref="GOA:Q83NH9" FT /db_xref="InterPro:IPR003335" FT /db_xref="InterPro:IPR005791" FT /db_xref="UniProtKB/TrEMBL:Q83NH9" FT /protein_id="CAD67166.1" FT /translation="MVVLLLLSLDIWQVFFSGSTFLPKLALDLEGGTQIVLRAKAAEKE FT ITSEQLQQAVAIIRNRVDSSGISEAEISVQGSTNISVSIPGTPSQEVYDRIRSSSKMDM FT RAVLLTKPIQHAAMNEGSTHAGSTASAAIGDKNATRGSPKSSEHRKNIPKTPHDTSGMI FT PSPRPKNGSDMAWITKYWRDRFDSHNCKDNAGDSTPDNLPLVVCDQYGTTKYLLGPVEV FT SGTDISRAVADPVSSHFAGASIGWGVTITFNAHGGEKFKDVSNRLISLAAPRNQFAAVL FT DGVVITAPEVRGVTSNPQITGNFNQTTATALASQLSFGSLPVSFEVQSSENISATLGSS FT QLQSGILAGILGMILVVVYSLFQYRLLGLLTVSSLICSAIVTYLVITFLSWQNGYRLSL FT AGVAGLIVAIGITADSFIVYFERVKDELREGRDIVRAVDRGWSRALRTICASDAVNFLA FT AIVLFLVAVGSVKGFAFTLGLTTLVDLLVVVFFTHPVLQYLSHSSFFTRKYSGLNVKSA FT VYRGRLMTRDKSQKTIAERKAGH" FT misc_feature complement(214400..215198) FT /note="Protein export membrane protein Score = -55.5 FT E-value = 3.3e-06" FT misc_feature complement(order(214416..214484,214494..214547, FT 214644..214712,214740..214808,214821..214880)) FT /note="5 probable transmembrane helices predicted for FT Unknown_CDS by TMHMM2.0 at aa 342-361, 366-388, 398-420, FT 453-470 and 474-496" FT CDS complement(215982..216473) FT /transl_table=11 FT /locus_tag="TW500" FT /product="putative secreted protein" FT /note="Similar to Streptomyces coelicolor putative secreted FT protein SCO1517 or SCL2.07c SWALL:Q9L292 (EMBL:AL137778) FT (169 aa) fasta scores: E(): 0.038, 25.74% id in 167 aa" FT /db_xref="InterPro:IPR003849" FT /db_xref="UniProtKB/TrEMBL:Q83NH8" FT /protein_id="CAD67167.1" FT /translation="MSLELLFPIALVLLLVAFFFSQMKRKREMAALQAKLLPGVCVMTS FT FGLFGTLKNIDDEKALLEIAPGCVVSVHARTIARVEELQAPGEQVLDERPEDTDVLRSP FT EGASVSVSKNTSRSASRRSGATKQAVKQRSAAGKTGAARSAASSSAAPKARSTRSARDK FT " FT misc_feature complement(216411..216464) FT /note="1 probable transmembrane helix predicted for FT Unknown_CDS by TMHMM2.0 at aa 4-21" FT CDS complement(216495..217490) FT /transl_table=11 FT /gene="ruvB" FT /locus_tag="TW501" FT /product="holliday junction DNA helicase RuvB" FT /note="Similar to Escherichia coli holliday junction DNA FT helicase RuvB or b1860 or z2912 or ecs2570 SWALL:RUVB_ECOLI FT (SWALL:P08577) (336 aa) fasta scores: E(): 3.6e-57, 54.4% FT id in 318 aa" FT /db_xref="GOA:Q83HN0" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR004605" FT /db_xref="InterPro:IPR008823" FT /db_xref="InterPro:IPR008824" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q83HN0" FT /protein_id="CAD67168.1" FT /translation="MTSDEKQTEGALRPKLLAEFVGQNKVKNQLALLIQAAKIQGRVTD FT HALLAGPPGLGKTTLAMIVAAECGVSIRMSSGPAIQHAGDLAALLSSLLPGELLFIDEI FT HRMSRVAEEMLYLAMEDFRIDIMVGKGPGATSVPLELSPFTLVGATTRAGLLPGPLRDR FT FGFTARLDFYSPEELLQVLIRSARLMEIQYYDDALESIAVRSRGTPRVANRLLRRTRDY FT LLVSNSSEILSKEIALKAMDVYEVDSLGLDRLDRAVLHAIFDRFSGGPVGIKTLSAYLG FT EEAETIENSIEPFLVRQGLLVRTPRGRQITDLARKHMGFKEDLSGFELYL" FT misc_feature complement(216818..217355) FT /note="ATPase family associated with various cellular FT activities (AAA) Score = 97.7 E-value = 1.6e-26" FT misc_feature complement(217317..217340) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(217501..218025) FT /transl_table=11 FT /gene="ruvA" FT /locus_tag="TW502" FT /product="holliday junction DNA helicase RuvA" FT /note="Similar to Thermus thermophilus holliday junction FT DNA helicase RuvA SWALL:RUVA_THETH (SWALL:Q9F1Q3) (191 aa) FT fasta scores: E(): 1e-15, 38.23% id in 170 aa" FT /db_xref="GOA:Q83HM9" FT /db_xref="HSSP:1IXR" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR010994" FT /db_xref="InterPro:IPR011114" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013849" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:Q83HM9" FT /protein_id="CAD67169.1" FT /translation="MHGIGFLVRVPQSFNPEVDAEVKLYTSLQVREDSVSLYGFASVLE FT CTVFEQLITISGVGPRVALAILSVLTPAEVAAAVLEGDDKPLQRVSGVGKKLAGTIVLQ FT LAGKLTSVPLENRKQEQAVDRSAEIVQALIGLGWQRQESAAAVESVLEKDQSLTMPEIL FT RNALRYLAKQE" FT misc_feature complement(217686..217902) FT /note="RuvA central domain II Score = 77.5 E-value = 2e-20" FT misc_feature complement(217908..218022) FT /note="RuvA N terminal domain Score = 24.1 E-value = FT 1.3e-08" FT CDS complement(218124..218675) FT /transl_table=11 FT /gene="ruvC" FT /locus_tag="TW503" FT /product="crossover junction endodeoxyribonuclease RuvC" FT /EC_number="3.1.22.4" FT /note="Similar to Escherichia coli crossover junction FT endodeoxyribonuclease RuvC or b1863 or z2915 or ecs2573 FT SWALL:RUVC_ECOLI (SWALL:P24239) (172 aa) fasta scores: E(): FT 2e-07, 27.38% id in 168 aa, and to Mycobacterium leprae FT crossover junction endodeoxyribonuclease RuvC or ml0481 or FT b1177_c3_226 SWALL:RUVC_MYCLE (SWALL:P40834) (188 aa) fasta FT scores: E(): 1.6e-20, 40% id in 185 aa" FT /db_xref="GOA:Q83HM8" FT /db_xref="InterPro:IPR002176" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR020563" FT /db_xref="UniProtKB/TrEMBL:Q83HM8" FT /protein_id="CAD67170.1" FT /translation="MRIMAVDPGLTNCGVAVVNATGPLSLELLAVKVFHTDRSLSFENR FT IGKIGDSLLSMLEEFSPDLFALEKVFAQHNLSTVSGVAGVIGVASYLCYKHGTHIAFHT FT PSEIKASICGYGNAKKDQIRSMVNRVFLSQDIPLRHDASDALALAVCCARRYALHNEHF FT TEARLRWLSALGASSTERGR" FT misc_feature complement(218222..218669) FT /note="Crossover junction endodeoxyribonuclease RuvC Score FT = 108.8 E-value = 7.6e-30" FT |