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EBI DbfetchID BX248358; SV 1; linear; genomic DNA; STD; PRO; 348408 BP. XX AC BX248358; XX DT 06-NOV-2003 (Rel. 77, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 4) XX DE Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 5/8 XX KW complete genome. XX OS Corynebacterium diphtheriae OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Corynebacteriaceae; Corynebacterium. XX RN [1] RP 1-348408 RX DOI; 10.1093/nar/gkg874 RX PUBMED; 14602910. RA Cerdeno-Tarraga A.M., Efstratiou A., Dover L.G., Holden M.T.G., Pallen M., RA Bentley S.D., Besra G.S., Churcher C., James K.D., De Zoysa A., RA Chillingworth T., Cronin A., Dowd L., Feltwell T., Hamlin N., Holroyd S., RA Jagels K., Moule S., Quail M.A., Rabbinowitsch E., Rutherford K., RA Thomson N.R., Unwin L., Whitehead S., Barrell B.G.Parkhill.J.; RT "The complete genome sequence and analysis of Corynebacterium diphtheriae RT NCTC13129"; RL Nucleic Acids Res. 31(22):6516-6523(2003). XX RN [2] RP 1-348408 RA Cerdeno-Tarraga A.M.; RT ; RL Submitted (03-OCT-2003) to the EMBL/GenBank/DDBJ databases. RL Cerdeno-Tarraga A.M., submitted on behalf of the Pathogen Sequencing Unit, RL Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA RL E-mail: amct@sanger.ac.uk XX DR EMBL-CON; BX248353. DR RFAM; RF00080; yybP-ykoY. DR StrainInfo; 118780; NCTC 13129. XX FH Key Location/Qualifiers FH FT source 1..348408 FT /organism="Corynebacterium diphtheriae" FT /strain="NCTC13129" FT /mol_type="genomic DNA" FT /note="biotype gravis" FT /db_xref="taxon:1717" FT CDS complement(58..612) FT /transl_table=11 FT /gene="apt" FT /locus_tag="DIP1369" FT /product="adenine phosphoribosyltransferase" FT /EC_number="2.4.2.7" FT /note="Similar to Corynebacterium glutamicum adenine FT phosphoribosyltransferase Apt SWALL:APT_CORGL FT (SWALL:O87330) (185 aa) fasta scores: E(): 4.9e-42, 66.27% FT id in 172 aa, and to Escherichia coli adenine FT phosphoribosyltransferase Apt or B0469 SWALL:APT_ECOLI FT (SWALL:P07672) (183 aa) fasta scores: E(): 5.7e-19, 40.85% FT id in 164 aa" FT /db_xref="GOA:Q6NGY0" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR005764" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGY0" FT /protein_id="CAE49900.1" FT /translation="MTVPLYADAREAIACKTRFVPDFPVPGVIFEDLTPVLADAAAFSL FT IVDELAKNAMRLGADFIGGLDARGFLLGSAVAYKAGTGILAIRKKGKLPPPVHSEEYSL FT EYGTAALELPAEGLELEDKKVVLVDDVLATGGTLDAARKLIEACGATVSGYAVVLEVDG FT LGGRERLNDAPLVVINESATA" FT misc_feature complement(61..531) FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain" FT misc_feature complement(202..240) FT /note="ScanRegExp hit to PS00103, Purine/pyrimidine FT phosphoribosyl transferases signature." FT CDS complement(668..2419) FT /transl_table=11 FT /locus_tag="DIP1370" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum FT dipeptide-binding protein DciaE SWALL:O87329 FT (EMBL:AF038651) (502 aa) fasta scores: E(): 4e-83, 48.61% FT id in 434 aa, and to Mycobacterium tuberculosis FT hypothetical lipoprotein Rv2585c precursor or MT2662 or FT MTCY227.16 SWALL:YP85_MYCTU (SWALL:Q50636) (557 aa) fasta FT scores: E(): 7.1e-30, 29.09% id in 574 aa" FT /db_xref="GOA:Q6NGX9" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:Q6NGX9" FT /protein_id="CAE49901.1" FT /translation="MGCGQLDRVDSILVGMSYYNFPSPQGIGNVLVGKAKQTVRIRIPS FT TNLRKEVVRVGGLLSVSVMAVALSSCSAHPESSLSKSNQLGYAVNDRLVTTNAGSTEGA FT STNAQLLAGRLYPAPYVSGPKGQLIPNLSMASAQVLPGINQKIVYTISPDAVYSDGEAV FT TCDDYLLAFTAGTYDYVFDSYMPLMKQIDKVECKPRDREVTVTLKENFGPRWRQLFPAG FT VILPAHAIARKMGVTLEDLNTVLQSRDVDALQPIAEVWNRGFSLDQFDPDLQVSSGPYK FT VDRVGDRGEVYLTRNPHYGGQPAEIESVVVWPKGANLKELKDTGSLEIAEVTSSKEIDW FT LDRNDSTNSFDVQAQSGVLTEELLLANAGVFATRENRQAFASCIDQSSIASESSELSGV FT EVAPVTARTIRANDPMAGHVKDLTEAHLHSDVEQARRLAGQTIAIGYEGPDARMEAIVA FT NIRRSCEPAGIIVVDAHQEGSGIRDLSRSFTTDHGYQFDKIGTIDVVLKALDPATEFES FT VATTSNNIAATRQAELSTWDVVPSIPLASQPRVFVVDRRVSNVVLNTDLAGIGWNMDRW FT FFSKNSK" FT stem_loop complement(2421..2473) FT /note="Score 66: 22/22 (100%) matches, 0 gaps" FT CDS complement(2489..3601) FT /transl_table=11 FT /gene="secF" FT /locus_tag="DIP1371" FT /product="Putative protein export membrane protein" FT /note="Similar to Corynebacterium glutamicum SecF FT SWALL:Q9AE06 (EMBL:AF038651) (403 aa) fasta scores: E(): FT 4.4e-84, 62.14% id in 383 aa, and to Escherichia coli FT protein-export membrane protein SecF or B0409 or Z0508 or FT ECS0460 SWALL:SECF_ECOLI (SWALL:P19674) (323 aa) fasta FT scores: E(): 1.7e-11, 25.14% id in 338 aa" FT /db_xref="GOA:Q6NGX8" FT /db_xref="InterPro:IPR003335" FT /db_xref="InterPro:IPR005665" FT /db_xref="UniProtKB/TrEMBL:Q6NGX8" FT /protein_id="CAE49902.1" FT /translation="MSGNSVLSKLYTGDGGLDFVGRRRTWYRTTLIIVAICFIAIAVRG FT FSLGIDFVGGTKMNMPAAQLETSEVADTFKDATGIEPELVQIVGSGDTRILEINSERLS FT EDQISQARVALFEKYQPVGSQGQPTPDAIGDSTVSESWGSTITQRMLISMFVFLAAVFV FT YITVRLEKEMAVAAIVALLVDLIVISGVYALVGFEVSPATIIGLLTVLAFSLYDTVIVF FT DKVRENTAGYLGNRTRTYAEHANLAVNQTVMRSISTTIISALPIIALIVIAVWLMGVGT FT LKDLALVQLIGVIEGTFSSVFLATPILVSLKNRSKKTAEHNRQVEMHRCGAEAQDDSAP FT EQSAESTQKRTVSGPQVTTSTGASWRPDRG" FT misc_feature complement(2660..3496) FT /note="HMMPfam hit to PF02355, Protein export membrane FT protein" FT misc_feature complement(order(2675..2740,2756..2821,2936..3001, FT 3014..3079,3101..3166,3443..3508)) FT /note="6 probable transmembrane helices predicted for FT DIP1371 by TMHMM2.0" FT CDS complement(3602..5380) FT /transl_table=11 FT /gene="secD" FT /locus_tag="DIP1372" FT /product="Putative protein export membrane protein" FT /note="Similar to Corynebacterium glutamicum SecD FT SWALL:Q9AE07 (EMBL:AF038651) (637 aa) fasta scores: E(): FT 1.2e-139, 67.52% id in 585 aa, and to Rhodobacter FT capsulatus protein-export membrane protein SecD FT SWALL:SECD_RHOCA (SWALL:O33517) (554 aa) fasta scores: E(): FT 1e-12, 27.64% id in 539 aa" FT /db_xref="GOA:Q6NGX7" FT /db_xref="InterPro:IPR003335" FT /db_xref="InterPro:IPR005791" FT /db_xref="UniProtKB/TrEMBL:Q6NGX7" FT /protein_id="CAE49903.1" FT /translation="MPSQTKKVASNSRSWPFKSLFGFTVLIAIIYALVFATADHSARPK FT LGIDLQGGTRVTLVPQGQNPTEDQLAQAKSILENRVNGMGVSGASVVSDGNTLVITVPG FT EDTTQARALGQTSQLLFRPVAKPDAPDTTKLLDAMKEMANRWVEVGVLTPQEANDALSN FT TAKALAQSEGKKPEDAKAPTVTAKEPKEPANSIESEQLRNKVLEVMKKDRQSTDATTQL FT SASSLLKCDDTPDPLQGTDDPTKPLVACDPSSGQVYVLSPAPLLQGETDQANGKRLTGN FT EIDTNRPITGGLNPQTGQMEIGFSFKSDNGDQGSATWAKLTQEYLQKQVAITLDSKIIS FT APVIQSATPVGSATAITGSFSQKEAQDLANNLKYGALPLSFAGENGETGGTTTTVPASL FT GVASLKAGLIAGLVGLILVALYSLINYRFFGLISMFSLVASFALVFGALVLLGRWIGYS FT LDLAGIAGLIIGIGTTADSFVVLYERIKDEVRDGRSFRSSVPRGWERARQTIITGNAVT FT LIGAVIIYILAVGEVKGFAFTLGLTTIFDIVVTFLVTAPLVVLASRKPWTSSGAANGMG FT KIISMHHGANAAKGEE" FT misc_feature complement(3689..4513) FT /note="HMMPfam hit to PF02355, Protein export membrane FT protein" FT misc_feature complement(order(3698..3763,3794..3850,3932..3997, FT 4028..4093,4109..4162,5255..5320)) FT /note="6 probable transmembrane helices predicted for FT DIP1372 by TMHMM2.0" FT misc_feature complement(5267..5380) FT /note="Signal peptide predicted for DIP1372 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.652 between residues 38 and 39" FT CDS complement(5385..5570) FT /transl_table=11 FT /locus_tag="DIP1373" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGX6" FT /protein_id="CAE49904.1" FT /translation="MAKRIPLNLNDFKVCSSVDSASVAYHSQEPKLLFDRVHFRIDGKQ FT READGGVLLDHHLHRS" FT CDS complement(5611..5904) FT /transl_table=11 FT /locus_tag="DIP1374" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 13.5 kDa protein SWALL:Q9AE08 (EMBL:AF038651) (121 aa) FT fasta scores: E(): 7.2e-10, 34.83% id in 89 aa, and to FT Mycobacterium tuberculosis hypothetical 13.0 kDa protein FT Rv2588c precursor or MT2665 or MTCY227.13 SWALL:YP88_MYCTU FT (SWALL:Q50633) (115 aa) fasta scores: E(): 5.9e-05, 37.77% FT id in 90 aa" FT /db_xref="InterPro:IPR003849" FT /db_xref="UniProtKB/TrEMBL:Q6NGX5" FT /protein_id="CAE49905.1" FT /translation="MSMTSTLLLYVALVVVFVLPSLLIRRRQKQHLDRLKNLQESMMIG FT QRVITTAGVHAVIKGIAENTVDLEIAPNILVTFEKSAVISIEDNKSNSELEA" FT misc_feature complement(5644..5892) FT /note="HMMPfam hit to PF02699, Uncharacterized secreted FT proteins, YajC family COG1862" FT misc_feature complement(5827..5904) FT /note="Signal peptide predicted for DIP1374 by SignalP 2.0 FT HMM (Signal peptide probability 0.601) with cleavage site FT probability 0.204 between residues 26 and 27" FT misc_feature complement(5833..5889) FT /note="1 probable transmembrane helix predicted for DIP1374 FT by TMHMM2.0" FT CDS complement(5908..6996) FT /transl_table=11 FT /gene="ruvB" FT /locus_tag="DIP1375" FT /product="holliday junction DNA-helicase" FT /note="Similar to Corynebacterium glutamicum holliday FT junction DNA-helicase RuvB SWALL:Q9AE09 (EMBL:AF038651) FT (363 aa) fasta scores: E(): 1.6e-102, 81.16% id in 361 aa, FT and to Escherichia coli holliday junction DNA helicase RuvB FT or B1860 or Z2912 or ECS2570 SWALL:RUVB_ECOLI FT (SWALL:P08577) (336 aa) fasta scores: E(): 1e-62, 56.11% id FT in 319 aa" FT /db_xref="GOA:P61530" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR004605" FT /db_xref="InterPro:IPR008823" FT /db_xref="InterPro:IPR008824" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:P61530" FT /protein_id="CAE49906.1" FT /translation="MANIEKTEFHVPAPVSAAGNQKSSLGNADVDARLQSNEGEVETSL FT RPRSLDEFIGQPKVRDQLNLVLSGAKSRGVAPDHVLLSGPPGLGKTTMAMIIAYELGTS FT LRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRMARPAEEMLYMAMEDFRIDVIVGK FT GPGATSIPLELAPFTLVGATTRSGMLTGPLRDRFGFTAQMEFYEVEDLTKVVVRAAAVL FT GVSIDHDAAVEIASRSRGTPRIANRLLRRVRDFAEVNADGHINLAAAQAALVVFDVDEM FT GLDRLDRAVLEALIKGHGGGPVGINTLALAVGEEPSTVEEVCEPYLVRAGMVTRTGRGR FT VATATAWRHLGLEPPEGIIGSL" FT misc_feature complement(6223..6762) FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA)" FT misc_feature complement(6370..6771) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(6724..6747) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(7014..7625) FT /transl_table=11 FT /gene="ruvA" FT /locus_tag="DIP1376" FT /product="holliday junction DNA-helicase" FT /note="Similar to Corynebacterium glutamicum holliday FT junction DNA-helicase RuvA SWALL:Q9AE10 (EMBL:AF038651) FT (206 aa) fasta scores: E(): 1.2e-36, 56.79% id in 206 aa, FT and to Escherichia coli holliday junction DNA helicase RuvA FT or B1861 or Z2913 or ECS2571 SWALL:RUVA_ECOLI FT (SWALL:P08576) (203 aa) fasta scores: E(): 1.9e-16, 39.51% FT id in 205 aa" FT /db_xref="GOA:Q6NGX4" FT /db_xref="InterPro:IPR000085" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR010994" FT /db_xref="InterPro:IPR011114" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013849" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGX4" FT /protein_id="CAE49907.1" FT /translation="MIVSLRGTVESIGLGSAVIECNGVGYEVLAAPTTLGRLTRGEQAR FT VLTTMVVREESQTLYGFTDDASRRMFVLLQSVSGLGPKLALAAQSVFTTEDIARHIAGG FT DAKALQKIPGVGKRMAERMIVDLKDKVVGFNDGIPAAAQPQLSIAVDQAVQEQVLEALV FT GLGFSEKIALPVLSRVLRDSPELSKSQALRAALSELGTKN" FT misc_feature complement(7038..7625) FT /note="BlastProDom hit to PD006268, PD006268" FT misc_feature complement(7218..7436) FT /note="HMMPfam hit to PF02904, RuvA central domain II" FT misc_feature complement(7440..7622) FT /note="HMMPfam hit to PF01330, RuvA N terminal domain" FT CDS complement(7664..8155) FT /transl_table=11 FT /gene="ruvC" FT /locus_tag="DIP1377" FT /product="crossover junction endodeoxyribonuclease" FT /note="Highly similar to Corynebacterium glutamicum FT crossover junction endodeoxyribonuclease RuvC SWALL:Q9AE11 FT (EMBL:AF038651) (221 aa) fasta scores: E(): 1.8e-52, 83.95% FT id in 162 aa, and to Escherichia coli crossover junction FT endodeoxyribonuclease RuvC or B1863 or Z2915 or ECS2573 FT SWALL:RUVC_ECOLI (SWALL:P24239) (172 aa) fasta scores: E(): FT 1.8e-13, 36.66% id in 150 aa" FT /db_xref="GOA:Q6NGX3" FT /db_xref="InterPro:IPR002176" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR020563" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGX3" FT /protein_id="CAE49908.1" FT /translation="MGIDPGLTRCGLSVVQAGKGRSVIPVAVGVVRTPPHAELSQRLLE FT LSEAVNSWIDEYQPDVVAIERIFERGNVSTVMNTAHGVGVLVLAAAQRGLPVHMYTPSE FT VKKAISGNGRADKKQMTAMITRILGLVEAPKPADAADALALAVCHCWRAPMLAIHNSQR FT " FT misc_feature complement(7700..8155) FT /note="BlastProDom hit to PD008333, PD008333" FT misc_feature complement(7709..7747) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT misc_feature complement(7709..8155) FT /note="HMMPfam hit to PF02075, Crossover junction FT endodeoxyribonuclease RuvC" FT misc_feature complement(7784..7843) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT misc_feature complement(7865..7915) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT misc_feature complement(7931..7981) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT misc_feature complement(8114..8155) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT CDS complement(8338..9090) FT /transl_table=11 FT /gene="yfcA" FT /locus_tag="DIP1378" FT /product="Conserved hypothetical protein" FT /note="Highly similar to Corynebacterium glutamicum FT hypothetical structural protein YfcA SWALL:Q9AE12 FT (EMBL:AF038651) (251 aa) fasta scores: E(): 2.7e-76, 83.53% FT id in 249 aa, and to Escherichia coli protein YebC in 249 FT aa" FT /db_xref="InterPro:IPR002876" FT /db_xref="InterPro:IPR017856" FT /db_xref="UniProtKB/Swiss-Prot:P62034" FT /protein_id="CAE49909.1" FT /translation="MSGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGGDPSA FT NPTLDDMIKKAKKASVPNDNIERARKRGSGEEAGGADWQTIMYEGYGPNGVAVLIECLT FT DNRNRAASEVRTAMSKNGGNMAENGAVSYMFKRRGFVLVNKGELTEDDVLMAVLDAGAE FT EVSDAGDKFEILSAPGDVAAIRDALAEAEIEVEDSDSDFRADVLVPLEANDARKIFRLI FT DALEESDDVQNVYTNMDLSDEVLAELEA" FT misc_feature complement(8374..9075) FT /note="BlastProDom hit to PD004323, PD004323" FT misc_feature complement(8374..9078) FT /note="HMMPfam hit to PF01709, Domain of unknown function FT DUF28" FT CDS complement(9328..10182) FT /transl_table=11 FT /gene="tesB" FT /locus_tag="DIP1379" FT /product="Putative acyl-CoA thioesterase II" FT /note="Similar to Mycobacterium tuberculosis TesB or TesB2 FT or Rv2605c or MTCY01A10.28 SWALL:O06209 (EMBL:Z95387) (281 FT aa) fasta scores: E(): 1.9e-49, 50.17% id in 279 aa, and to FT Escherichia coli acyl-CoA thioesterase II TesB or B0452 or FT Z0564 or ECS0506 SWALL:TESB_ECOLI (SWALL:P23911) (285 aa) FT fasta scores: E(): 3e-20, 37.27% id in 279 aa" FT /db_xref="GOA:Q6NGX1" FT /db_xref="InterPro:IPR003703" FT /db_xref="UniProtKB/TrEMBL:Q6NGX1" FT /protein_id="CAE49910.1" FT /translation="MGRIFDVLDVETLDANLFRGPVVESALARTFGGQVAAQALVCATQ FT TVNTEDFIVHSLHGYFVSAGDSSKPTIFEVQRIRDGRSFISRHITALQNGRPIFGMQAS FT FHIRNDHGPEHSDLVRRVPPPEAVQIDRDGLPASSRALLDEWGDWDIRKIASEDFEKNP FT YTPSQQVVWFKSKEALPDDETFHICTLAYMSDMTLLHSSLVPHPEEPVKLASLDHAMWF FT LRPFRADEWLLYDQVSPSAHAGRALTQGKIFNLNGDLVAITTQEGLTRHLKPGEADIPF FT VSQ" FT misc_feature complement(9364..10179) FT /note="HMMPfam hit to PF02551, Acyl-CoA thioesterase" FT CDS 10413..11558 FT /transl_table=11 FT /locus_tag="DIP1380" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGX0" FT /protein_id="CAE49911.1" FT /translation="MLDLRPTGDVNYYYVGIFGLSPGALQEYPAVGVWPIKALSWITGS FT EHAVFVVGFAVLCLLFDALFFGALLTVNQERFPGSRFAAVVWIIFGLATQHVFLLRLDI FT MCGVAVGLAALCYFVNPHRASALIAIATMMKLWPGILAAGLVGGFRNMSSWIRLAVFFT FT TSAVLVVIVYFVDGFDRLMSPLTYQTDRGIQIESIPGTWFMYKALGDPEHYSVYYATSK FT SFEVTGPNIETALMISSWAMLATVVFGVGWALVNFLFDRWNPETTLAWSIVMVLLVICT FT NKVLSPQYVLWISPLIVVAVAVRPRSWAVRLLAIMSIFITFFSWLVYPARYDDIISVPF FT DTSFTIYVLIARNLLYLVSLFVAVGWWVSINVEARSSTKMP" FT misc_feature order(10446..10514,10557..10625,10701..10769,10782..10850, FT 10869..10937,11121..11189,11223..11291,11334..11393, FT 11454..11522) FT /note="9 probable transmembrane helices predicted for FT DIP1380 by TMHMM2.0" FT misc_feature 10545..10577 FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT CDS 11612..12355 FT /transl_table=11 FT /locus_tag="DIP1381" FT /product="Putative biotin synthesis related protein" FT /note="Similar to Bacillus sphaericus FT 6-carboxyhexanoate--CoA ligase BioW SWALL:BIOW_BACSH FT (SWALL:P22822) (245 aa) fasta scores: E(): 1.5e-20, 34.71% FT id in 242 aa, and to Bacillus subtilis FT 6-carboxyhexanoate--CoA ligase BioW SWALL:BIOW_BACSU FT (SWALL:P53559) (259 aa) fasta scores: E(): 4.4e-16, 33.33% FT id in 252 aa. Note: There is a possible alternative start FT codon at residue 7" FT /db_xref="GOA:Q6NGW9" FT /db_xref="InterPro:IPR005499" FT /db_xref="UniProtKB/TrEMBL:Q6NGW9" FT /protein_id="CAE49912.1" FT /translation="MLYASYMSYVSIKMHASSNGAHISGAETLVDESRAYEFLSSFYQR FT ANTHSKGKPEITTLTIRRIKDADIITIPALEVKCLPALHPSEAHRQVIEQLSNVVSPTI FT AQMALHTVLNARNMRGAILLCAHTGQRLDPYDPQRGVRASTFGVTPQESAGPTLNKSHF FT NEALVLASKVMSAPGIVAEICISDDPAYTTGYVTTENTYIRIPHMKDPYSPIGGRVFLL FT DTRVSTPEDTISYLEQKPVLITGVN" FT CDS 12355..13545 FT /transl_table=11 FT /locus_tag="DIP1382" FT /product="Putative aminotransferase (biotin synthesis FT related protein)" FT /note="Similar to Bacillus sphaericus FT 8-amino-7-oxononanoate synthase BioF SWALL:BIOF_BACSH FT (SWALL:P22806) (389 aa) fasta scores: E(): 8.9e-47, 40.95% FT id in 376 aa, and to Escherichia coli FT 8-amino-7-oxononanoate synthase BioF or B0776 FT SWALL:BIOF_ECOLI (SWALL:P12998) (384 aa) fasta scores: E(): FT 9.8e-39, 37.39% id in 353 aa" FT /db_xref="GOA:Q6NGW8" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q6NGW8" FT /protein_id="CAE49913.1" FT /translation="MSPSLDFYAHQRNVEWHERGLERTPAQFYSPQTPHAIIDNRPMLL FT FSSSDYLGLSEHPFLKNAAIQAISSLGTGSGGSRLTTGSSIHRSIEIHLAQFFGSPDAV FT FFASGYQANVTIISTLAGPHCTIYSDSLNHASIIDGCRLSKSQVKTFPTGDYEALDAAL FT AHCDTTNSLIITDAVFSMSGTIADLEQLRQVAARHGSWLLIDDAHGIGCLGNAGRGTAH FT LFPHAPTDFSQEVIVGTSSKALGGEGGFALCSEQVATLLRNQGRGYVFSTAPAPATMAT FT TDAALTVLEQEPDRIRRLQSNIAYFAQRSSNVVPFQKSGFFSPIISYTIGDENEALKSA FT QLLRDNGFFIPAIRYPTVSRGSAMLRITMTAMHSHHDIDQLADALNQLESHRLDNS" FT misc_feature 12571..13521 FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II" FT CDS complement(13542..14003) FT /transl_table=11 FT /locus_tag="DIP1383" FT /product="Putative secreted protein" FT /note="Similar to the N-terminal region of Mycobacterium FT tuberculosis CDC1551 MutT/NudIX family protein MT2684 FT SWALL:AAK47000 (EMBL:AE007101) (351 aa) fasta scores: E(): FT 1.2e-06, 42.2% id in 154 aa, and to Streptomyces coelicolor FT hypothetical 19.8 kDa protein SCL2.14c SWALL:Q9L285 FT (EMBL:AL137778) (180 aa) fasta scores: E(): 0.0099, 35.88% FT id in 170 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGW7" FT /protein_id="CAE49914.1" FT /translation="MTTILVAIVVCFITVFIAWAWSTAQRLNRLHIRTDSALQALQAAL FT DQRSAVLAALYPQHNALAQSAQKIQLDYETFSERSEKEKRVGACISFLGDAVPASLVEA FT EARVQLAFRFYNDAVADTRALRVRPLVRGLRLGGTARLPIFFELPNTHD" FT misc_feature complement(13935..13991) FT /note="1 probable transmembrane helix predicted for DIP1383 FT by TMHMM2.0" FT misc_feature complement(13944..14003) FT /note="Signal peptide predicted for DIP1383 by SignalP 2.0 FT HMM (Signal peptide probability 0.904) with cleavage site FT probability 0.765 between residues 20 and 21" FT CDS complement(14015..15106) FT /transl_table=11 FT /locus_tag="DIP1384" FT /product="Putative transferase (LPS related)" FT /note="Similar to Streptomyces coelicolor putative sugar FT transferase SCL2.15c SWALL:Q9L284 (EMBL:AL137778) (387 aa) FT fasta scores: E(): 3.5e-45, 49.06% id in 375 aa, and to FT Mycobacterium tuberculosis CDC1551 glycosyl transferase FT MT2685 SWALL:AAK47001 (EMBL:AE007101) (378 aa) fasta FT scores: E(): 9.2e-42, 47.89% id in 380 aa" FT /db_xref="GOA:Q6NGW6" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q6NGW6" FT /protein_id="CAE49915.1" FT /translation="MRIGIVCPYSFDAPGGVQAHVLDLAEKFISQGHHVEVLGPASEST FT QLPDFVTRGGASLPIPYNGSVARLSFGPSTFIRARDFINRGQFDVLHIHEPNSPSFSMA FT ALKVARGPIVATYHASSNRSLALKFALPFLRGQLEKIRGGIAVSEMARRWQVEMLGGDP FT ILIPNGVETSQFELDKKPLWSGRIPEIVFLGRLDEHRKGLDILLRAVDRLDHEVRVTVI FT GGGTHPPAPRIDFVGRVSDEEKAEILGRADIYVAPNRGGESFGIVLVEAMAAGCVVVAS FT DLEAFSAVCDAQSSQPSGILFRNGDADDLASTLRNVIENPKFGQELVTSGTQRAKEFDW FT DNVSKEIMRVYETVCDGTTVTAA" FT misc_feature complement(14093..14590) FT /note="HMMPfam hit to PF00534, Glycosyl transferases group FT 1" FT CDS complement(15133..16074) FT /transl_table=11 FT /locus_tag="DIP1385" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 35.4 FT kDa protein ML0453 or MLCl581.15c SWALL:O07148 FT (EMBL:Z96801) (320 aa) fasta scores: E(): 5.5e-52, 47.33% FT id in 300 aa, and to Streptomyces coelicolor putative FT acyltransferase SCL2.16c SWALL:Q9L283 (EMBL:AL137778) (311 FT aa) fasta scores: E(): 1.4e-37, 43.44% id in 290 aa" FT /db_xref="GOA:Q6NGW5" FT /db_xref="InterPro:IPR004960" FT /db_xref="UniProtKB/TrEMBL:Q6NGW5" FT /protein_id="CAE49916.1" FT /translation="MKSTSMNTNKRFQNVNQWKLHASAAAYLAGWKVVRLLPEPVAYRL FT FSWAAVIASRRGRGMDQLRRNLTRVVGAESVDRALVKRSMQSYARYWCEAFRLSVIARD FT PDVIHRVDAHAVGVEQVNPHSPMIIVLPHSGNWDLIGMYFVKKVGTFTTVAERVKPESL FT FRAFVNYRRSLGFEVLPLTGSETSPYSVLLQRVREGRTVCLLGERDLTSHGVEVEFFGE FT TTRMPAGAVKLALDSGAPLHVAHTWFEGDDWGLSLSEPVEITDVKSGVQAIAQIMEKNI FT KAHPQDWHLLQPLWINDLDRRRYESGLQPKND" FT CDS complement(16101..16754) FT /transl_table=11 FT /locus_tag="DIP1386" FT /product="Putative phosphatidyltransferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT CDP-diacylglycerol--glycerol-3-phosphate FT 3-phosphatidyltransferase, putative MT2687 SWALL:AAK47003 FT (EMBL:AE007101) (217 aa) fasta scores: E(): 6.9e-34, 48.29% FT id in 205 aa, and to Mycobacterium smegmatis FT phosphatidylinositol synthase PgsA SWALL:Q9F7Y9 FT (EMBL:AF265558) (222 aa) fasta scores: E(): 8.7e-31, 47% id FT in 200 aa" FT /db_xref="GOA:Q6NGW4" FT /db_xref="InterPro:IPR000462" FT /db_xref="UniProtKB/TrEMBL:Q6NGW4" FT /protein_id="CAE49917.1" FT /translation="MLSVHGRKPAAVIVEPVAKALIKIGFTPNSITIVGTAITIAIAVI FT LIPTDHLFAAAVLSGVFAAFDMVDGTMARMRGGGTKFGATLDASCDRITDGALFGAITW FT WLIFHHAASQMLVVASFVVLVCSQVISYVKARGEASGFTMNGGLVERPERLIVGLGGIG FT LAGLGVPFAVDVAIYLLAIGSIFTVGQRLYIASQSEIALEKTAAPAGAKEHPNF" FT misc_feature complement(16161..16589) FT /note="HMMPfam hit to PF01066, CDP-alcohol FT phosphatidyltransferase" FT misc_feature complement(order(16224..16289,16377..16442,16536..16601, FT 16617..16682)) FT /note="4 probable transmembrane helices predicted for FT DIP1386 by TMHMM2.0" FT misc_feature complement(16461..16586) FT /note="ProfileScan hit to PS50291, CDP-alcohol FT phosphatidyltransferases profile" FT misc_feature complement(16482..16550) FT /note="ScanRegExp hit to PS00379, CDP-alcohol FT phosphatidyltransferases signature." FT CDS complement(16747..17331) FT /transl_table=11 FT /locus_tag="DIP1387" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0455 SWALL:Q9CCU0 (EMBL:AL583918) (206 aa) fasta scores: FT E(): 6.3e-43, 61.49% id in 174 aa, and to Mycobacterium FT leprae hypothetical 20.7 kDa protein MLCl581.17c FT SWALL:O07150 (EMBL:Z96801) (186 aa) fasta scores: E(): FT 4.1e-42, 62.13% id in 169 aa" FT /db_xref="GOA:Q6NGW3" FT /db_xref="InterPro:IPR001310" FT /db_xref="InterPro:IPR011146" FT /db_xref="InterPro:IPR011151" FT /db_xref="UniProtKB/TrEMBL:Q6NGW3" FT /protein_id="CAE49918.1" FT /translation="MGSVPDNGETYVDQGIGVEDRLERLWAPYRMAYIKKDPVDDARGS FT TNPFVRIPELSDEDGLIVARGEYVYCLLNLFPYNSGHMMVVPYRQEPNLEDLTAEEISE FT LFAFGQAAIKVVKSVSRPDAINVGFNLGRASGGSVGEHLHMHIVPRWSGDANFMTVIDG FT TKVLPQLLRKTRSLLAQAWNDMDGIPGVAHA" FT misc_feature complement(16861..17202) FT /note="HMMPfam hit to PF01230, HIT family" FT stem_loop complement(17447..17491) FT /note="Score 54: 18/18 (100%) matches, 0 gaps" FT CDS complement(17515..19578) FT /transl_table=11 FT /gene="thrS" FT /locus_tag="DIP1388" FT /product="threonyl-tRNA synthetase" FT /EC_number="6.1.1.3" FT /note="Similar to Mycobacterium tuberculosis threonyl-tRNA FT synthetase ThrS or Rv2614c or MT2689 or MTCY1A10.20 FT SWALL:SYT_MYCTU (SWALL:O06200) (692 aa) fasta scores: E(): FT 2.1e-188, 67.06% id in 677 aa, and to Escherichia coli FT threonyl-tRNA synthetase ThrS or B1719 SWALL:SYT_ECOLI FT (SWALL:P00955) (642 aa) fasta scores: E(): 1e-50, 38.52% id FT in 649 aa" FT /db_xref="GOA:Q6NGW2" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002320" FT /db_xref="InterPro:IPR004154" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR012947" FT /db_xref="InterPro:IPR018158" FT /db_xref="InterPro:IPR018163" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGW2" FT /protein_id="CAE49919.1" FT /translation="MAHLIEAAPNPHQPFVVTAGVAVGAAMRELELPNKGPEAIVCVKD FT SEGTLRDLSFVPEQDSKFTPVPANTEDGRTVIRHSCTHVLAQAVQAEFPGTKLGIGPAI FT ENGFYYDFDVAEPFTPEDLQKLEKRMKKIVKQGQKFERRIFASVAEAEEALKNEPYKLE FT LIRDKGNVDPGSDEATEIGAGDLTGYYNVNPRTGEVDWYDLCRGPHVPTTKYIPAFALT FT RSSAAYWRGDQSLAGLQRIYGTAWESKEALEEYQLMMAEAEKRDHRRLGAELDLFSFPD FT EIGSGFPVFHPNGGIVRLEMEEHSRRRHINAGYSFVNTPHITKGDLFKKSGHLDFYADG FT MFPPMQLDGEVDEEGNVVKQAQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVY FT RYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEQELTSVLDFIISLLRDYGLDDFYLELS FT TKDPNKFVGSDEIWEKSTSILQRVATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQ FT MSTVQLDFNLPERFNLEYTSSDGSKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLA FT PHQVIGIPVADSFSEHLEKVTGMLRDNGVRASVDTSDDRMQKKIRNHTTGKVPFMLLAG FT ARDVEANAVSFRFLDGTQINGVPVDKAIGVITQWISSRNNKQPSEETVKKLV" FT misc_feature complement(17572..17862) FT /note="HMMPfam hit to PF03129," FT misc_feature complement(17827..17865) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT misc_feature complement(17893..17922) FT /note="ScanRegExp hit to PS00339, Aminoacyl-transfer RNA FT synthetases class-II signature 2." FT misc_feature complement(17905..17946) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT misc_feature complement(17989..18075) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT misc_feature complement(18223..18723) FT /note="HMMPfam hit to PF00587, tRNA synthetase class II (G, FT H, P, S and T)" FT misc_feature complement(18313..18384) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT misc_feature complement(18319..18384) FT /note="ScanRegExp hit to PS00179, Aminoacyl-transfer RNA FT synthetases class-II signature 1." FT misc_feature complement(18397..18483) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT CDS complement(19767..20987) FT /transl_table=11 FT /locus_tag="DIP1389" FT /product="Putative secreted protein" FT /note="Similar to Yersinia pestis hypothetical protein FT YPO1856 SWALL:Q8ZF62 (EMBL:AJ414150) (434 aa) fasta scores: FT E(): 8.7e-30, 33.74% id in 406 aa, and to Escherichia coli FT hypothetical protein YcdB precursor or B1019 FT SWALL:YCDB_ECOLI (SWALL:P31545) (423 aa) fasta scores: E(): FT 2.4e-29, 32.22% id in 419 aa. Note: Contains a putative FT twin-arginine translocation (TAT) system recognition motif FT (RRGFLT) at the N-terminal region" FT /db_xref="InterPro:IPR006311" FT /db_xref="InterPro:IPR006314" FT /db_xref="InterPro:IPR017909" FT /db_xref="InterPro:IPR019546" FT /db_xref="UniProtKB/TrEMBL:Q6NGW1" FT /protein_id="CAE49920.1" FT /translation="MSRRGFLTGTAGVAAAGALSACTEPAHDADAVGVDQTVAQEIEPF FT DGIHQSGIATPAQSHLIVLGLNCRAGVDSAAVRRLLTLWTEDARELTQARNPVGSLEPE FT MTSSPSRLTVTAGAGARLFDILGKSEMKPAWLKDIPVFSKDRLDPRWGQTDLVLQICSD FT DPMTAAFAMRHMTRSGSDYAEVKWVQQGFLNARGTLQKGETPRNLFGQKDGTINPHTAE FT EFDKQVWIDNEDDSPRWMRGGTCMVVRRISMNLDTWERLDRQSREVAIGRDIVEGAPLS FT GGKEHDSADYEAVDEYGLPKIDARSHMALATPPSDLPNQRLLRRAYTYNETPMVGTDQL FT SNAGLVFCCFQKDPRKQFIPIQQRLDASDRLNEWIKHIGSAVYAIFPGTDQKKTEASIW FT GAALFDS" FT misc_feature complement(20895..20987) FT /note="Signal peptide predicted for DIP1389 by SignalP 2.0 FT HMM (Signal peptide probability 0.975) with cleavage site FT probability 0.441 between residues 48 and 49" FT misc_feature complement(20964..20981) FT /note="Potential twin-arginine recognition motif RRGFLT" FT CDS complement(21081..21695) FT /transl_table=11 FT /locus_tag="DIP1390" FT /product="Putative secreted protein" FT /note="Low similarity to Vibrio cholerae hypothetical FT protein VCA0037 SWALL:Q9KNC8 (EMBL:AE004347) (150 aa) fasta FT scores: E(): 9.6e-09, 34.09% id in 132 aa, and to Rhizobium FT loti MLL3326 protein SWALL:Q98GH4 (EMBL:AP003001) (179 aa) FT fasta scores: E(): 3.1e-05, 29.45% id in 146 aa" FT /db_xref="InterPro:IPR007410" FT /db_xref="UniProtKB/TrEMBL:Q6NGW0" FT /protein_id="CAE49921.1" FT /translation="MSTSRRIKGAIAVFAMASIALTACSNSESDSEKKVDTASSAAAAA FT SETNSMSMGADSVMMMNPYVRSMEDGKSMTGIFGEIMNHSDKDVTVVGFSSSINAKMNQ FT LHEVVDGVMKEKEGGFVIPAGGTYTLEPGKDHMMLMGVDKPVAAGDTVSVTLELSDGTT FT VDVKDIPVRKLGAGDENYGADGAVHMDHGTSETMKHDHSHK" FT misc_feature complement(21609..21695) FT /note="Signal peptide predicted for DIP1390 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.461 between residues 29 and 30" FT CDS complement(21702..22346) FT /transl_table=11 FT /locus_tag="DIP1391" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR014755" FT /db_xref="InterPro:IPR014756" FT /db_xref="UniProtKB/TrEMBL:Q6NGV9" FT /protein_id="CAE49922.1" FT /translation="MQALNFNDFVPAIVVSISSDVSGEFVKGQCVRSTWQGVKFASIGA FT LTGLFLLQQPVVAHDVVISSNPQDGAKVTEFPTTVELTFSGIPKKDFNTVALSRKSDST FT VLYRGEPHLNGQVVSFTLPSNIEKQAGEYLIGFQITSSDGHSTKGRTTFTYVDPSQENG FT SSEVSAESELKPTTSEGLSSTVTFAAGGITLIALAIVSIFLVARRNSRKGK" FT misc_feature complement(21729..21794) FT /note="1 probable transmembrane helix predicted for DIP1391 FT by TMHMM2.0" FT tRNA complement(22556..22627) FT /gene="tRNA-Val" FT /product="transfer RNA-Val" FT /anticodon=(pos:22593..22595,aa:Val) FT /note="tRNA Val anticodon CAC, Cove score 81.63" FT tRNA 22916..22988 FT /gene="tRNA-Gly" FT /product="transfer RNA-Gly" FT /anticodon=(pos:22949..22951,aa:Gly) FT /note="tRNA Gly anticodon GCC, Cove score 71.96" FT tRNA 23006..23077 FT /gene="tRNA-Val" FT /product="transfer RNA-Val" FT /anticodon=(pos:23038..23040,aa:Val) FT /note="tRNA Val anticodon GAC, Cove score 71.57" FT tRNA 23111..23183 FT /gene="tRNA-Gly" FT /product="transfer RNA-Gly" FT /anticodon=(pos:23144..23146,aa:Gly) FT /note="tRNA Gly anticodon GCC, Cove score 71.96" FT tRNA 23222..23292 FT /gene="tRNA-Cys" FT /product="transfer RNA-Cys" FT /anticodon=(pos:23254..23256,aa:Cys) FT /note="tRNA Cys anticodon GCA, Cove score 58.71" FT tRNA 23300..23371 FT /gene="tRNA-Val" FT /product="transfer RNA-Val" FT /anticodon=(pos:23332..23334,aa:Val) FT /note="tRNA Val anticodon GAC, Cove score 71.57" FT tRNA 23405..23477 FT /gene="tRNA-Gly" FT /product="transfer RNA-Gly" FT /anticodon=(pos:23438..23440,aa:Gly) FT /note="tRNA Gly anticodon GCC, Cove score 71.96" FT CDS 23519..24328 FT /transl_table=11 FT /locus_tag="DIP1392" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 29.0 FT kDa protein ML1340 or MLC1351.23 TR:O05684 (EMBL:Z95117) FT (268 aa) fasta scores: E(): 1.4e-12, 30.97% id in 226 aa, FT and to Mycobacterium tuberculosis hypothetical 27.7 kDa FT protein CY441.40 Rv2671 or MT2745 or MTCY441.40 TR:AAK47060 FT (EMBL:Z80225) (239 aa) fasta scores: E(): 9.8e-12, 29.27% FT id in 222 aa" FT /db_xref="GOA:Q6NGV8" FT /db_xref="InterPro:IPR002734" FT /db_xref="PDB:2P4G" FT /db_xref="UniProtKB/TrEMBL:Q6NGV8" FT /protein_id="CAE49923.1" FT /translation="MLTDMQRDSASSSTVTTEQIVYGALPLTTINEPECRAIAITSING FT SATLSGVSGPMGDQTDADLLIQLRGWADAIVVGAETARKENYGPVVLPHGIKNQRQKLG FT RCGLPKLTLLSKSLYFDFSSELFSPDLPSELSPLVITQQPANNSEQWDQRLQKLIDVGV FT EVIVAPTSTNPLKIAFDALHARRLKKISIEGGPSVYRQALSLGIVDRLHLTIAPNIICP FT VESPLFGKISDDSFTTRLVLEMLSSSPNGLIFSRYKVIRDTLGNPTQ" FT misc_feature 23624..24250 FT /note="HMMPfam hit to PF01872, RibD C-terminal domain" FT CDS 24386..24796 FT /transl_table=11 FT /locus_tag="DIP1393" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT PilB-related protein MT2748 TR:AAK47063 (EMBL:AE007105) FT (136 aa) fasta scores: E(): 6.2e-39, 70.67% id in 133 aa, FT and to Streptomyces coelicolor putative oxidoreductase FT SC9B1.08 TR:Q9X828 (EMBL:AL049727) (135 aa) fasta scores: FT E(): 4.3e-33, 67.74% id in 124 aa" FT /db_xref="GOA:Q6NGV7" FT /db_xref="InterPro:IPR002579" FT /db_xref="InterPro:IPR011057" FT /db_xref="UniProtKB/TrEMBL:Q6NGV7" FT /protein_id="CAE49924.1" FT /translation="MTNFKLITDTEWRQRLSSEEYRVLREAGTEAPHTGEYTNTTTEGI FT YSCRACGTELFRSTEKFNSHCGWPSFFSPLAGDKVIERTDTSHGMVRTEVICANCESHL FT GHVFAGEGYDTPTDLRYCINSVCLTLIPAEES" FT misc_feature 24404..24736 FT /note="BlastProDom hit to PD004057, PD004057" FT misc_feature 24410..24784 FT /note="HMMPfam hit to PF01641, Domain of unknown function FT DUF25" FT CDS complement(24875..25579) FT /transl_table=11 FT /locus_tag="DIP1394" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2750 TR:AAK47065 FT (EMBL:AE007105) (231 aa) fasta scores: E(): 3e-55, 59.3% id FT in 231 aa, and to Streptomyces coelicolor hypothetical 28.1 FT kDa protein Sc1B5.02 TR:O69830 (EMBL:AL023517) (243 aa) FT fasta scores: E(): 5.5e-48, 54.7% id in 223 aa" FT /db_xref="InterPro:IPR010644" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/TrEMBL:Q6NGV6" FT /protein_id="CAE49925.1" FT /translation="MAEKLNFEELNSMQRYSQFAVFRAIPGALGSDRAEIVAQAQSFFD FT GLETAGKVEVRGIYDLAGCRAEADFMIWWIAEEFEEIQAAFARFRRETVLGQVSEVAWL FT GNSLHRPAEFNRSHLPSFIMGEIPGDWITVYPFVRSYDWYIMDPQKRRKILAEHGQAAR FT DFPDVRANTVPAFALGDYEWMLAFEAPRLDRIVDLMHKMRYTEARLHVREETPFFTGRR FT VSEVSELVNVLP" FT CDS 25804..26385 FT /transl_table=11 FT /locus_tag="DIP1395" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 22.6 kDa protein Rv2680 or MT2754 or MTV010.04 TR:O86317 FT (EMBL:Z96072) (210 aa) fasta scores: E(): 2.7e-38, 56.59% FT id in 182 aa, and to Streptomyces coelicolor hypothetical FT 24.7 kDa protein Sc1C3.1cC TR:O69860 (EMBL:AL023702) (238 FT aa) fasta scores: E(): 1.2e-22, 41.17% id in 187 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGV5" FT /protein_id="CAE49926.1" FT /translation="MPIIASESSHESIPQDFMDAVESMHKAQLRPEISLGTIRPPQRLA FT PFSHAVGLEVSGTLSDDSQGDAFGRLILLHDPTSDESWDGSMRLVAYIQADMDASVAND FT PLLPDVAWQWLTEALDKTHADHTNLGGTVTATASVRFGEIGGPPRAYQVEMRASWTATA FT IDLAPHVSAFAQVLANVAGLSPEGTTSISR" FT CDS 26404..27627 FT /transl_table=11 FT /locus_tag="DIP1396" FT /product="Putative ribonuclease" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT ribonuclease D, putative MT2755 TR:AAK47070 (EMBL:AE007105) FT (438 aa) fasta scores: E(): 5.1e-49, 38.14% id in 409 aa, FT and to Escherichia coli ribonuclease D Rnd or B1804 FT SW:RND_ECOLI (P09155) (375 aa) fasta scores: E(): 1.2e-10, FT 28.36% id in 342 aa" FT /db_xref="GOA:Q6NGV4" FT /db_xref="InterPro:IPR002121" FT /db_xref="InterPro:IPR002562" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6NGV4" FT /protein_id="CAE49927.1" FT /translation="MALLVTQPSEGLPPLAATSRSIYEAAYQLSQGTGPFAIDTERAGA FT YRYDDRAYLLQIRREGSGTVLIDPEANRRLVTSVLGKVINNQPWIIHAAATDLPCLSEL FT GFYPSTIFDTELAGRLAGLPRVNLASMLEERLEVTLKKAHGAEDWSRRPLPHSWLVYAA FT LDVEKLIPLAESMKLLLEAHGKLEWHKQECAHLINTSSHGLDTQRSWQDIKGVSRLTRP FT RQLVVAEALWELRDDEARMKNTSVSRLLPDKVLISVAQRPPRNSQAALRASEIPKQYRK FT RIARWMPTINDVLESDPRTWPHTPQFDENQLPSKYVWEKIHPESLDDFEEVKNSIVEKA FT LLLNLPAENLMQPHSVKELCWQLRDVPRPIAQDDVIECLMRLEARPWQIDNSASVITDT FT LNKIEHAS" FT misc_feature 26425..26946 FT /note="HMMPfam hit to PF01612, 3'-5' exonuclease" FT misc_feature 26440..26946 FT /note="HMMSmart hit to SM00474, 3'-5' exonuclease" FT misc_feature 27064..27303 FT /note="HMMPfam hit to PF00570, HRDC domain" FT CDS complement(27688..29595) FT /transl_table=11 FT /gene="dxs" FT /locus_tag="DIP1397" FT /product="1-deoxy-D-xylulose 5-phosphate synthase" FT /EC_number="2.2.-.-" FT /note="Similar to Streptomyces sp 1-deoxy-D-xylulose FT 5-phosphate synthase Dxs SW:DXS_STRC1 (Q9RBN6) (631 aa) FT fasta scores: E(): 1.3e-121, 53.58% id in 627 aa, and to FT Mycobacterium tuberculosis 1-deoxy-D-xylulose 5-phosphate FT synthase Dxs or Rv2682c or MT2756 or MTCY05A6.03c FT SW:DXS_MYCTU (O07184) (638 aa) fasta scores: E(): 2e-141, FT 58.66% id in 629 aa" FT /db_xref="GOA:Q6NGV3" FT /db_xref="HSSP:1W88" FT /db_xref="InterPro:IPR005474" FT /db_xref="InterPro:IPR005475" FT /db_xref="InterPro:IPR005476" FT /db_xref="InterPro:IPR005477" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR015941" FT /db_xref="InterPro:IPR020826" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGV3" FT /protein_id="CAE49928.1" FT /translation="MSILEHISSPADVKTLSYEQLDTLASEIREFLVEKVSATGGHLGP FT NLGVVELTLAIHRVFSSPSDPIIFDTSHQSYVHKILTGRAGAFDTLRQKDGLSGYTSRA FT ESNHDWTESSHASASLSYADGLAKAFQLKGEKARNVVAVVGDGALTGGMCWEALNNIAT FT GTERNVVVVVNDNGRSYSPTIGGFADNLAALRMKPSYDRVMEQGKTTLKSLGWVGERTF FT EALHAFKEGVKSSVIPTEMFPELGMKYIGPVNGHNTKAVEAALRYGRDHKGPLIVHVVT FT EKGKGYAPAENDVAELMHSTGVINPKTGEPVGTKSPGWTSVFSKELVKAGETRKDIVAI FT TAAMAGPTGLSAFGEKFPDRLFDVGIAEQHAMTSAAGLALGGLHPVVAIYSTFLNRAFD FT QLLMDVGLLNLPVTIVLDRAGVTGSDGASHNGVWDFAVAGIVPGIRIAAPRDDENLKEL FT FAEALTIDSPTVVRFPKGELPSRLSAQQRFDDGAELLHYSDSDHEDSTPSILVVAVGSL FT VSSVMEIVSDIEECGCNVTVVDPRWAVPVAPSIVGLAADHELVITVEDGIIHGGVGAMI FT NEALNASEIDVPVRNLAFPEVFPEHQSRNQLLDAVGLSPRGIKTQIIAAAESLYLLDKE FT " FT misc_feature complement(27742..28104) FT /note="HMMPfam hit to PF02780, Transketolase, C-terminal FT domain" FT misc_feature complement(28153..28650) FT /note="HMMPfam hit to PF02779, Transketolase, pyridine FT binding domain" FT misc_feature complement(28279..28329) FT /note="ScanRegExp hit to PS00802, Transketolase signature FT 2." FT misc_feature complement(29452..29511) FT /note="ScanRegExp hit to PS00801, Transketolase signature FT 1." FT CDS complement(29807..31069) FT /transl_table=11 FT /locus_tag="DIP1398" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 43.2 kDa protein Rv2689c or MT2763 or MTCY05A6.10c FT TR:O07191 (EMBL:Z96072) (405 aa) fasta scores: E(): FT 3.4e-27, 40.39% id in 401 aa, and to Streptomyces FT coelicolor SC10A5.06 protein TR:O54099 (EMBL:AL021529) (458 FT aa) fasta scores: E(): 1e-20, 31.59% id in 440 aa" FT /db_xref="GOA:Q6NGV2" FT /db_xref="InterPro:IPR002792" FT /db_xref="InterPro:IPR010280" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGV2" FT /protein_id="CAE49929.1" FT /translation="MTKDQQNIERGSVINVEILNAAHGGQGIAKYDGRVIFVKGAFPGD FT RLSANITHVKKKFARATIASIEMPSPLRMQQRCLAAANGAGCCDFGEFDPEIEGRYKAD FT LVLEQLERLGKVSQPPTCEVVSFGSPTQWRTRMRLGVDAQGRAGGFASQSREVVSGVPC FT SQGVMGLLDGIVGAEQNVLRFTPGSQVVVVCDDLGQRTVVETQPAPRGKRTESMVKVVE FT GTGKVSQVVDGVTFELPATGFWQSHKDAAQAYADTIREWFGSLIIRNTDSSLVAWDLYG FT GCGSFASAILSAVDNHGVVHCVESAPAAVSAGKRALSQLVEDQKIVFHTETVERAMNQL FT PAPTLVVLDPPRVGAGAETVRAIAQSGPQAAIHIGCDPATFARDIAEWSRNGFILEKLR FT VFDAFPGTHHCETIGLLTKKN" FT misc_feature complement(30875..31051) FT /note="HMMPfam hit to PF01938, TRAM domain" FT CDS complement(31387..32106) FT /transl_table=11 FT /locus_tag="DIP1399" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae U1764K ML1029 FT TR:Q49993 (EMBL:U15181) (273 aa) fasta scores: E(): 1e-24, FT 38.88% id in 234 aa, and to Mycobacterium tuberculosis FT hypothetical 27.2 kDa protein Rv2696c or MTCY05A6.17c FT TR:O07198 (EMBL:Z96072) (259 aa) fasta scores: E(): FT 1.5e-24, 37.34% id in 241 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGV1" FT /protein_id="CAE49930.1" FT /translation="MWPFKRQNGDSDHDENNHEEAAVQQGVDTQKNVTQTDADSPDPIH FT DAISGETGPFDADSVNIEDFDFSDFAGGILNLGSLLVPLPKTSEVQVEMGPDGPKMLHI FT LTQFGRITPVAFAAPKAPGQWRSATQEIAEGMRADNLDVDFQQGPWGREIVGTSDDGNG FT VIRIIGVDGPRWMLRVTLAAPSESAERMAELGREVVARTFVRRGNEPILAGSSLPVALP FT QPLAEQVQQEMMRRAEQ" FT CDS complement(32165..32623) FT /transl_table=11 FT /gene="dut" FT /locus_tag="DIP1400" FT /product="deoxyuridine 5'-triphosphate nucleotidohydrolase" FT /EC_number="3.6.1.23" FT /note="Similar to Mycobacterium tuberculosis deoxyuridine FT 5'-triphosphate nucleotidohydrolase Dut or Rv2697c or FT MT2771 or MTCY05A6.18c SW:DUT_MYCTU (O07199) (154 aa) fasta FT scores: E(): 7.2e-32, 63.26% id in 147 aa, and to the FT C-terminal region of Homo sapiens deoxyuridine FT 5'-triphosphate nucleotidohydrolase, mitochondrial FT precursor Dut SW:DUT_HUMAN (P33316) (252 aa) fasta scores: FT E(): 8.2e-14, 41.3% id in 138 aa" FT /db_xref="GOA:P61907" FT /db_xref="InterPro:IPR008180" FT /db_xref="InterPro:IPR008181" FT /db_xref="UniProtKB/Swiss-Prot:P61907" FT /protein_id="CAE49931.1" FT /translation="MENDQEKPSMVAIQRLDPELPLPVRKHRGDAGADLFSAESVTIEP FT GHRILVGTGIAIALPIGTVGLIHPRSGRALKEGLSIVNTPGTIDADYRGEIKVCLINLD FT PTTPIRIERGERIAQLLVQKVELVDFCEVETLSETERGVNGYGSTGVN" FT misc_feature complement(32174..32572) FT /note="HMMPfam hit to PF00692, dUTPase" FT misc_feature complement(32315..32587) FT /note="BlastProDom hit to PD000946, PD000946" FT CDS 32766..33278 FT /transl_table=11 FT /locus_tag="DIP1401" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 17.6 kDa protein Rv2698 or MTCY05A6.19 TR:O07200 FT (EMBL:Z96072) (161 aa) fasta scores: E(): 1.9e-21, 45.28% FT id in 159 aa, and to Mycobacterium leprae U1764I ML12027 FT TR:Q49991 (EMBL:U15181) (157 aa) fasta scores: E(): 3e-19, FT 41.77% id in 158 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGU9" FT /protein_id="CAE49932.1" FT /translation="MTSQNSSAGSTADTSVIYSEKQWVPWHWWLLGAFVVALITAQLAM FT NRSALWLYAPAVLLTAVAVWVLLSLSKTRIAVEVDPDGTRWLVAGDANLPDSVVSRSMM FT VPATAKRNAMGRQLDPSAFVVSHEWVPEMVMLVLNDDDDPTPYWLVSSKDPETLLHAFL FT PHQHPSR" FT misc_feature order(32832..32900,32910..32978) FT /note="2 probable transmembrane helices predicted for FT DIP1401 by TMHMM2.0" FT CDS complement(33314..33607) FT /transl_table=11 FT /locus_tag="DIP1402" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2773 TR:AAK47088 FT (EMBL:AE007106) (100 aa) fasta scores: E(): 1.6e-17, 57% id FT in 100 aa, and to Streptomyces coelicolor hypothetical 11.0 FT kDa protein SC2E9.05 TR:O54130 (EMBL:AL021530) (98 aa) FT fasta scores: E(): 4.9e-14, 49.49% id in 99 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGU8" FT /protein_id="CAE49933.1" FT /translation="MATDYDAPRRREEDEMESDSLEGLKAAESNKNDMDDDGEIVEPFE FT LPAVDLSGEELNVTVIPRQADEFTCSECFLVQRNNRIDHVEDDGSVVCKDCA" FT CDS complement(33799..34632) FT /transl_table=11 FT /locus_tag="DIP1403" FT /product="Putative hydrolase" FT /note="Similar to Mycobacterium tuberculosis FT inositol-1-monophosphatase SuhB or Rv2701c or MT2775 or FT MTCY05A6.22c SW:SUHB_MYCTU (O07203) (290 aa) fasta scores: FT E(): 1e-38, 45% id in 280 aa, and to Escherichia coli FT inositol-1-monophosphatase SuhB or SsyA or B2533 FT SW:SUHB_ECOLI (P22783) (267 aa) fasta scores: E(): 3.2e-19, FT 37.22% id in 231 aa" FT /db_xref="GOA:Q6NGU7" FT /db_xref="HSSP:1AWB" FT /db_xref="InterPro:IPR000760" FT /db_xref="InterPro:IPR020550" FT /db_xref="InterPro:IPR020583" FT /db_xref="UniProtKB/TrEMBL:Q6NGU7" FT /protein_id="CAE49934.1" FT /translation="MDSLREYAELAAIAAEVACQASDHIRRTMRELGDVTAGMETKSSD FT VDPVTIVDKAAEHFIADALSHLRPGDGLLGEEGAESSSSTGITWIVDPIDGTVNFIYGI FT PQYAVSVAACIGENVVAGAVINVAISDLYVAACGSGAFVLRSDSDALKSIEASKCSDLQ FT HALIATGFSYSSPRREDQAKLLVSLLPNVRDIRRFGSAALDLCAVAEGCFDGYYEHGLN FT AWDFAAGALIAQEAGAKIKQPELKLASSAGALLLASSSPIFRELELQFYPFDMRK" FT misc_feature complement(33820..34617) FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family" FT misc_feature complement(33919..33963) FT /note="ScanRegExp hit to PS00630, Inositol monophosphatase FT family signature 2." FT misc_feature complement(33919..33975) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(33979..34026) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(34117..34149) FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT misc_feature complement(34324..34383) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(34327..34368) FT /note="ScanRegExp hit to PS00629, Inositol monophosphatase FT family signature 1." FT misc_feature complement(34390..34440) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT CDS 34835..35596 FT /transl_table=11 FT /gene="ppgK" FT /locus_tag="DIP1404" FT /product="polyphosphate glucokinase" FT /EC_number="2.7.1.63" FT /note="Similar to Mycobacterium tuberculosis polyphosphate FT glucokinase PpgK or Rv2702 or MT2776 or MTCY05A6.23 FT SW:PPGK_MYCTU (Q59568) (265 aa) fasta scores: E(): 1.5e-50, FT 57.91% id in 240 aa, and to Corynebacterium ammoniagenes FT polyphosphate glucokinase PpgK TR:Q9AGV8 (EMBL:AF326348) FT (277 aa) fasta scores: E(): 3.2e-59, 63.85% id in 249 aa" FT /db_xref="GOA:Q6NGU6" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:Q6NGU6" FT /protein_id="CAE49935.1" FT /translation="MIRMENIGFGIDVGGSGIKGARVNLDTGEFVGDRIKILTPKPATP FT DAVAETIKRILDQAEWEGPVGITLPSVIHEQRALTAANIDPSWIDVDVNELFARHLGDT FT EVSVLNDADAAGLAEAQFGDPIAREGSVILLTFGTGIGSAFLVNGTLFPNTELGHMLVD FT GEEAEKIASSAAKDRDEIGYGKWAKRVSKVLNEYERLFWPSAFIVGGGISRKAEKWVPR FT LTVNTKVVPAQLRNTAGIVGAAMAASQNLHP" FT CDS 35729..35926 FT /transl_table=11 FT /locus_tag="DIP1405" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGU5" FT /protein_id="CAE49936.1" FT /translation="MAFCLTERANTIIRVQSQQPNCMYAIVGYGAMPESFLLSLSFMQF FT LSTKSKTVVAVTLDDLSQFR" FT misc_feature 35789..35857 FT /note="1 probable transmembrane helix predicted for DIP1405 FT by TMHMM2.0" FT CDS 36061..37569 FT /transl_table=11 FT /gene="sigA" FT /locus_tag="DIP1406" FT /product="RNA polymerase sigma factor" FT /note="Similar to Brevibacterium flavum RNA polymerase FT sigma factor SigA TR:Q9ANT7 (EMBL:AF320817) (498 aa) fasta FT scores: E(): 3.1e-100, 76.93% id in 503 aa, to FT Mycobacterium tuberculosis RNA polymerase sigma factor RpoD FT or SigA or MysA or RpoV or Rv2703 or MT2777 or MTCY05A6.24 FT SW:RPSA_MYCTU (Q60162) (528 aa) fasta scores: E(): 2.2e-83, FT 67.47% id in 535 aa, and to Streptomyces coelicolor RNA FT polymerase principal sigma factor HrdB or SC5B8.10 FT SW:HRDB_STRCO (P18183) (511 aa) fasta scores: E(): 9.5e-62, FT 62.42% id in 495 aa. Note: also similar in its C-terminal FT region to CDIP1413, 329 aa; 58.133% identity in 332 aa FT overlap" FT /db_xref="GOA:Q6NGU4" FT /db_xref="InterPro:IPR000943" FT /db_xref="InterPro:IPR007624" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR007630" FT /db_xref="InterPro:IPR009042" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012760" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q6NGU4" FT /protein_id="CAE49937.1" FT /translation="MANAGEASSATVKKAAKKTAAKKTARKVARKVTAVKVAATPTVTS FT SAESATAEPAIELPSSEPVKKAAKKTAKKTAKKVAKKAAKKTAKKTTAKKSTRKSAKKV FT AAPVPEEATQSSEESEDELESLAGEDSDEDYDPHLDEFDDDDEMHTDELGEDDSSDDDS FT DEDEGSSVWDEDESAALRQARKDAELSASADSVRAYLKQIGKVALLNAEQEVSLAKRIE FT AGLYATYRMEQMEEAFNNGDKEAKLTPAVKRDLRAIARDGRKAKNHLLEANLRLVVSLA FT KRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTI FT RIPVHMVEVINKLGRIQRELLQDLGREPTPQELAKEMDITEEKVLEIQQYAREPISLDQ FT TIGDEGDSQLGDFIEDSEAVIAVDAVSFTLLQDQLQDVLHTLSEREAGVVKLRFGLTDG FT MPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD" FT misc_feature 36097..36369 FT /note="ProfileScan hit to PS50318, Lysine-rich region." FT misc_feature 36448..36585 FT /note="ProfileScan hit to PS50312, Aspartic acid-rich FT region." FT misc_feature 36847..37530 FT /note="HMMPfam hit to PF00140, Sigma-70 factor" FT misc_feature 36865..36888 FT /note="ScanRegExp hit to PS00867, Carbamoyl-phosphate FT synthase subdomain signature 2." FT misc_feature 36919..36942 FT /note="ScanRegExp hit to PS00030, Eukaryotic RNA FT Recognition Motif (RRM) RNP-1 region signature." FT misc_feature 36937..36978 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT /note="ScanRegExp hit to PS00715, Sigma-70 factors family FT signature 1." FT misc_feature 37009..37035 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 37381..37419 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 37441..37506 FT /note="Predicted helix-turn-helix motif with score 1603 FT (+4.65 SD) at aa 461-482, sequence RTLDEIGQVYGVTRERIRQIES" FT misc_feature 37444..37491 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 37444..37524 FT /note="ScanRegExp hit to PS00716, Sigma-70 factors family FT signature 2." FT misc_feature 37489..37524 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT stem_loop 37655..37702 FT /note="Score 66: 22/22 (100%) matches, 0 gaps" FT CDS complement(37903..38376) FT /transl_table=11 FT /locus_tag="DIP1407" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGU3" FT /protein_id="CAE49938.1" FT /translation="MTTPNDSYPAGEPQFGNDLGSGGYPTAGYPTDLPIDEQLPMKNAL FT APWALGLAIVSVVVLLSIFGTIFAWIPAVISVILAIVSLIKLRKMPLGSEPRKGMTISA FT LIIGLVVTIISVAVAILLVTVLKDTLGECASLETSEQQQECVNQKVNELNQNK" FT misc_feature complement(order(38011..38076,38122..38187,38194..38244)) FT /note="3 probable transmembrane helices predicted for FT DIP1407 by TMHMM2.0" FT CDS complement(38485..40194) FT /transl_table=11 FT /locus_tag="DIP1408" FT /product="Conserved hypothetical protein" FT /note="Similar, but shorter in its N-terminal region, to FT Mycobacterium tuberculosis hypothetical 65.8 kDa protein FT Rv2917 or MT2985 or MTCY338.05 SW:YT17_MYCTU (Q10966) (602 FT aa) fasta scores: E(): 6.4e-116, 62.39% id in 569 aa, and FT to Mycobacterium leprae hypothetical 65.2 kDa protein FT ML1624 or MLCB250.18c SW:YT17_MYCLE (O33011) (596 aa) fasta FT scores: E(): 8.8e-113, 60.28% id in 569 aa" FT /db_xref="GOA:Q6NGU2" FT /db_xref="InterPro:IPR006935" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/TrEMBL:Q6NGU2" FT /protein_id="CAE49939.1" FT /translation="MGLRAWQRKALTKYLMQAPKDFLAVATPGAGKTTFALRVATELMG FT NKTVDRVIVVVPTEHLKIQWAQSAARVGLSLDPHFKNSDAVNPQYDGVVVTYAQVSMHP FT FKHYAVATSKKTLVILDEIHHGGDAKSWGDGIREAYGDAERRLALTGTPFRSDDSTIPF FT VRYEQDGEGHLVSRSDHTYGYSDALADGVVRPVVFLAYSGEARWRTNAGEEFSARLGEP FT LNPEQTARAWKTALDPKGDWIPAVLQAAHTRLLQLRRSIPDAGGLVIATDTTTARAYAK FT ILEEISSTPVTVVLSDEVGASKRIEDFSDNTDEWMVAVRMVSEGVDVPRLAVGVYATSA FT STPLFFAQAIGRFVRSRKKGETASVFLPSVPVLLDLAAKLENSRDHVLGKPDRPNEGWD FT DELLAQANREETEKDELRSYESIGAEAELDSLIYDGSSYGTGTFTGSDEEADYLGLPGL FT LDADQMRALLRKHQTEQLNARDEEAKKRQQLENEEREKRKKERESEVHDVASVKIPQLR FT KELNALVSITAGRTGRPHGAIHTEVRKKCGGPPTAMCSAEQLQARIDYLRRW" FT misc_feature complement(39652..40188) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(40096..40119) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(40194..40433) FT /transl_table=11 FT /locus_tag="DIP1409" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2781 TR:AAK47097 FT (EMBL:AE007107) (82 aa) fasta scores: E(): 1.4e-17, 65.78% FT id in 76 aa, and to Mycobacterium leprae U1764c ML1016 FT TR:Q49984 (EMBL:U15181) (107 aa) fasta scores: E(): FT 2.8e-16, 65.78% id in 76 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGU1" FT /protein_id="CAE49940.1" FT /translation="MSTSTKTIERPDIREETTTGDDTPKFFHYVKKDQIVDSAVSGRMV FT VALCGEAFPVTKQAKPGSPVCPDCERVYRGLRKK" FT CDS 40493..40981 FT /transl_table=11 FT /locus_tag="DIP1410" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGU0" FT /protein_id="CAE49941.1" FT /translation="MDEDSLTHAHTDFSHHSVDEVHISSGKRAFRRILGHRVELVTDAS FT RGPEQDRHHREVVYAWLQGLRIPFLVASMATYMWLHNVVVSVILFVICIPLPWIAVVIA FT NGVGEKRDPRKKVVYKPAVAREQAEYVALNQTNRRALDQKSSDCFDDTKPMVIDMDSD" FT misc_feature order(40661..40729,40742..40810) FT /note="2 probable transmembrane helices predicted for FT DIP1410 by TMHMM2.0" FT CDS 41024..42559 FT /transl_table=11 FT /locus_tag="DIP1411" FT /product="Putative transferase" FT /note="Similar to Streptomyces coelicolor putative FT transferase SCH5.08c TR:Q9X911 (EMBL:AL035636) (505 aa) FT fasta scores: E(): 3.6e-46, 35.44% id in 522 aa" FT /db_xref="GOA:Q6NGT9" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR007848" FT /db_xref="UniProtKB/TrEMBL:Q6NGT9" FT /protein_id="CAE49942.1" FT /translation="MRTPLSSVSPQLVQRFHELGFTPSSIRNFLGRPGFAAISRGEPAS FT VLYAMRENEDSDFYPLIATFILHRPVAAEALHRVLGGSLTDQLTETGVLEIVDASKAYL FT TAKIDIRWLELEDDLFWVFSDTDASMIADHVPGKDHVLGVGAASLSLLATTPRSPVNSV FT LDLGTGSGVQALGQLRHARSVTATDVHPRALDFAEATFAGAHFDVEILDGSWFEPIKNR FT KFDRIVANPPFVVGPPEIEHVYRDSGLDLDGATETVVRGAVDHLHSNGTAHLLGSWVHK FT NGESVASRVAEWIPSHGVIAWFLQRDTVDPIQYVNTWLRDESIDPRSEIGFKRTLSWLD FT HFSRAKVEAVGFGYVAIQRVDDSIPSEVYFEELTHQVDDYLGDEIEEFFVRVDWLREKN FT RDGIAQSQFYLRPGVAKESVSVTDIDSGMGFTHLKYRITRTEGPRWSHEVDEHIVSVIA FT GLHPEGLTLEDVATLYAVSNGLDDESFVDAIIDPVVALVRHGILLPAEITKGW" FT misc_feature 41489..41854 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 41702..41722 FT /note="ScanRegExp hit to PS00092, N-6 Adenine-specific DNA FT methylases signature." FT CDS 42570..43007 FT /transl_table=11 FT /locus_tag="DIP1412" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum ORF1 protein FT TR:Q45303 (EMBL:Z49824) (144 aa) fasta scores: E(): FT 8.7e-38, 71.52% id in 144 aa, and to Mycobacterium FT tuberculosis D-tyrosyl-tRNA Dtd or Rv1897c or MT1948 or FT MTCY180.21 TR:AAK46219 (EMBL:Z97193) (161 aa) fasta scores: FT E(): 5.5e-20, 48.25% id in 143 aa" FT /db_xref="GOA:Q6NGT8" FT /db_xref="InterPro:IPR003732" FT /db_xref="UniProtKB/TrEMBL:Q6NGT8" FT /protein_id="CAE49943.1" FT /translation="MRAVLTRVLSASVTVDNVVVGEINCPSTGGILALVGVGRNDSASA FT WETMTRKIAELRILKGEQSVETAHAPVLLVSQFTLMGRTAKGRRPSWFDAAPSDPAEET FT ITKIANGLRSRGITVYEGRFRADMQVESVNDGPFTVIVECP" FT misc_feature 42663..43001 FT /note="HMMPfam hit to PF02580, Uncharacterized ACR, FT COG1490" FT misc_feature 42669..42713 FT /note="ScanRegExp hit to PS00678, Trp-Asp (WD) repeats FT signature." FT CDS 43091..44080 FT /transl_table=11 FT /gene="sigB" FT /locus_tag="DIP1413" FT /product="RNA polymerase sigma factor" FT /note="Highly similar to Brevibacterium flavum RNA FT polymerase sigma factor SigB TR:Q9ANT6 (EMBL:AF320818) (331 FT aa) fasta scores: E(): 5.6e-106, 90.93% id in 331 aa, and FT to the C-terminal region of Streptomyces coelicolor RNA FT polymerase principal sigma factor HrdB or SC5B8.10 FT SW:HRDB_STRCO (P18183) (511 aa) fasta scores: E(): 1.8e-61, FT 56.91% id in 318 aa. Note: also similar to the C-terminal FT region of CDIP1406, 502 aa; 58.133% identity in 332 aa FT overlap" FT /db_xref="GOA:P33118" FT /db_xref="InterPro:IPR000943" FT /db_xref="InterPro:IPR007624" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR007630" FT /db_xref="InterPro:IPR009042" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/Swiss-Prot:P33118" FT /protein_id="CAE49944.1" FT /translation="MTSPSDVEASTETVDRGSRRNQTNDNPSADLVRVYLNGIGKTALL FT NAEDEVELAQTIEVGLYAEYLLENSQEPLTRAMKRDLKVLVKEGRKARSHLLEANLRLV FT VSLAKRYTGRGMPLLDLIQEGNLGLIRAMEKFDYSKGFKFSTYATWWIRQAITRGMADQ FT SRTIRLPVHLVEQVNKLSRIKREMYQQLGREATNEELAEESGIEESKIEMLLRQSRDPV FT SLDMPVGADEEAPLGDFIEDSEATDAESAVVASLRHSDIRTVLDTLEQREQDVIRLRYG FT LDDGVPRTLDQIGRQFGLSRERVRQIEREVMSKLRDGARAEKLRAYAQ" FT misc_feature 43358..44041 FT /note="HMMPfam hit to PF00140, Sigma-70 factor" FT misc_feature 43376..43399 FT /note="ScanRegExp hit to PS00867, Carbamoyl-phosphate FT synthase subdomain signature 2." FT misc_feature 43448..43489 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT /note="ScanRegExp hit to PS00715, Sigma-70 factors family FT signature 1." FT misc_feature 43520..43546 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 43892..43930 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 43952..44017 FT /note="Predicted helix-turn-helix motif with score 1921 FT (+5.73 SD) at aa 288-309, sequence RTLDQIGRQFGLSRERVRQIER" FT misc_feature 43955..44002 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 43955..44035 FT /note="ScanRegExp hit to PS00716, Sigma-70 factors family FT signature 2." FT misc_feature 44000..44035 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT CDS 44305..44985 FT /transl_table=11 FT /gene="dtxR" FT /locus_tag="DIP1414" FT /product="diphtheria toxin repressor" FT /note="Almost identical to the previously sequenced FT Corynebacterium diphtheriae diphtheria toxin repressor DtxR FT SW:DTXR_CORDI (P33120) (226 aa) fasta scores: E(): 7.6e-81, FT 99.11% id in 226 aa, and similar to Corynebacterium equii FT iron dependent regulatory protein IdeR TR:Q9F7T3 FT (EMBL:AF277002) (230 aa) fasta scores: E(): 1.1e-43, 56.71% FT id in 231 aa" FT /db_xref="GOA:P33120" FT /db_xref="InterPro:IPR001367" FT /db_xref="InterPro:IPR007167" FT /db_xref="InterPro:IPR008988" FT /db_xref="InterPro:IPR011991" FT /db_xref="PDB:1BI0" FT /db_xref="PDB:1BI1" FT /db_xref="PDB:1BI2" FT /db_xref="PDB:1BI3" FT /db_xref="PDB:1BYM" FT /db_xref="PDB:1C0W" FT /db_xref="PDB:1DDN" FT /db_xref="PDB:1DPR" FT /db_xref="PDB:1F5T" FT /db_xref="PDB:1FWZ" FT /db_xref="PDB:1G3S" FT /db_xref="PDB:1G3T" FT /db_xref="PDB:1G3W" FT /db_xref="PDB:1G3Y" FT /db_xref="PDB:1P92" FT /db_xref="PDB:1QVP" FT /db_xref="PDB:1QW1" FT /db_xref="PDB:1XCV" FT /db_xref="PDB:2DTR" FT /db_xref="PDB:2QQ9" FT /db_xref="PDB:2QQA" FT /db_xref="PDB:2QQB" FT /db_xref="PDB:2TDX" FT /db_xref="PDB:3GLX" FT /db_xref="UniProtKB/Swiss-Prot:P33120" FT /protein_id="CAE49945.1" FT /translation="MKDLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTV FT ARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRW FT EHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGVGNSDAAVPGTRVIDAATSMPRKV FT RIVQINEIFQVETDQFTQLLDADIRVGSEVEIVDRDGHITLSHNGKDVELIDDLAHTIR FT IEEL" FT misc_feature 44311..44493 FT /note="HMMPfam hit to PF01325, Iron dependent repressor, FT N-terminal DNA binding domain" FT misc_feature 44380..44679 FT /note="HMMSmart hit to SM00529, Helix-turn-helix diphteria FT tox regulatory element" FT misc_feature 44497..44709 FT /note="HMMPfam hit to PF02742, Iron dependent repressor, FT metal binding and dimerisation domain" FT CDS 45008..45994 FT /transl_table=11 FT /gene="galE" FT /locus_tag="DIP1415" FT /product="UDP-glucose 4-epimerase" FT /EC_number="5.1.3.2" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae UDP-glucose 4-epimerase GalE FT SW:GALE_CORDI (P33119) (328 aa) fasta scores: E(): FT 1.6e-126, 99.39% id in 328 aa, and to Corynebacterium FT glutamicum UDP-glucose 4-epimerase GalE SW:GALE_CORGL FT (Q45291) (329 aa) fasta scores: E(): 5.1e-97, 75.22% id in FT 327 aa, and to Lactobacillus casei UDP-glucose 4-epimerase FT GalE SW:GALE_LACCA (O84903) (331 aa) fasta scores: E(): FT 3.1e-55, 48.89% id in 317 aa" FT /db_xref="GOA:P33119" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR005886" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P33119" FT /protein_id="CAE49946.1" FT /translation="MKLLVTGGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDAVPLGA FT TFVEGDIKDVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKR FT NNVRNIVFSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATS FT LRYFNVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHI FT RDLADAHILALQSNVEGSHRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAPRRAGDP FT AVLIASSAKAQSELGWKPQRTDLHTIVSDAWAFTSQLGDKAHSASRG" FT misc_feature 45014..45964 FT /note="HMMPfam hit to PF01370, NAD dependent FT epimerase/dehydratase family" FT CDS complement(46043..47086) FT /transl_table=11 FT /locus_tag="DIP1416" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGT7" FT /protein_id="CAE49947.1" FT /translation="MTSTPHSPSEMFASIPGIFGFYPEESIVVLTLMHTKESCYQLGPV FT MRLDLKDLRYLSDIGDTLSAIEPDLVFGLIISGQKPEAIEDLRGLIEFVADCEIVPFDA FT CWYTSAIESGGKYDAIWLNEAMTEAALEYQSWRKGRIPLIANTGITGEMIHAGHLPELS FT RKDIEKHYAQAEESEQWDEYLITERYAELFDDPSTSFRSAQECIDAFSQAVELMRTEKL FT ITDAALTVAAFLKNKMSRDIIIECCVHNANTVKEALCYVSRHTKGFVRANALALYALCI FT VDSPWGNHITCVLQAAHNTLPFHHLTALVAEAYYRGLSGSIVDLVVSGSQEAQKHFGEA FT TNVKSAV" FT CDS 47338..48279 FT /transl_table=11 FT /locus_tag="DIP1417" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2787 TR:AAK47103 FT (EMBL:AE007107) (324 aa) fasta scores: E(): 2.1e-45, 45.09% FT id in 306 aa, and to Streptomyces coelicolor conserved FT hypothetical protein SCI52.04 TR:Q9ADA5 (EMBL:AL590507) FT (333 aa) fasta scores: E(): 4.2e-12, 26.64% id in 304 aa" FT /db_xref="InterPro:IPR002766" FT /db_xref="InterPro:IPR008492" FT /db_xref="UniProtKB/TrEMBL:Q6NGT6" FT /protein_id="CAE49948.1" FT /translation="MNEREAKMYELEFPAPDVASDGVDGPTLIIAMQGYADAGLAVEAS FT ADHLLSALEHRPVAVFNNDELIDYRSRRPAVTIDHNIVVDANELKLSMDVLRDSNGTPF FT LLLSGPEPDLRWDAFSQAVADLVRRFGVRRTICIYAAPMTVPHTRPLIVSAHGNSLDLI FT KHHFSIDSKVTIPGSASLHIERLLNKNNIDVAGYTAHVPHYLSASAYPLATLKLLEAIT FT TSTNLDFPLKTLEADAQKTALQVEEQVAGSQEIESVVKILEQQYDEELEKYRERNPKAL FT EIAEDDLPDADELGEEFERFLANIDEENGSDD" FT CDS 48312..50846 FT /transl_table=11 FT /locus_tag="DIP1418" FT /product="Putative helicase" FT /note="Similar in its full length to Streptomyces FT coelicolor putative helicase SCG8A.06 TR:Q9KZJ3 FT (EMBL:AL353863) (854 aa) fasta scores: E(): 2.1e-184, 56.4% FT id in 828 aa, and to the C-terminal region of FT Schizosaccharomyces pombe putative helicase SPAC6F12.16c FT SW:YDVG_SCHPO (O14232) (1117 aa) fasta scores: E(): FT 1.5e-13, 27.64% id in 445 aa" FT /db_xref="GOA:Q6NGT5" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/TrEMBL:Q6NGT5" FT /protein_id="CAE49949.1" FT /translation="MNLTQMLPDLDDVPESLLDEAIFDSFLSWTRSKDLALYPAQEEAA FT LGILAGDNVILATPTGSGKSMVAIAAHFIAMARGQRSFYTAPIKALVNEKFFALCDIFG FT PESVGMMTGDATVNGSAPIICATAEIVANIALRDGTDADIDQVVMDEFHYYSEPGRGWA FT WQVPLLELPRTQFLLMSATLGDTTFIQKDLSDRTGRTTNLVAGATRPVPLQFSYVYTPV FT HETIQDLLDTNNAPIYVVHFTQREAIERAQSLTSMTVIDSETKEKIATEIGNFKFTTTF FT GHTLSKLLRKGIGVHHAGMLPKYRRLVEKLSQTGLLKIICGTDTLGVGINVPIRTVLFT FT GLAKFDGSKQRILASREFHQIAGRAGRAGYDTVGNVVIEAPEHEIENWRLRQRAGSDLK FT KLKKLRKKSARDGEVTWGEKTYERLSEAEPENLQSQFRISNSMLLNVIARSGDAYVHLK FT HLLRTNHDTRDKQNKDILTALELFRGLVAAGIVEKLDSPDSTGRKYVITEDLRRDFALN FT QPLAPFALAALEILDKESTSYALDVISVFESILEDPRVVLIAQQKQARGEEIAALKAEG FT VEYTERMNIVEEISWPKPLEEILEPAFDTYCSGHPWAKEFTLSPKSIVRDMIEHGMTFS FT DFIATYGLSRSEGVVLHYLTDAWKTLSHSVPTEYVSDELEEIIEWLGELVRQVDSSLID FT EWANMADPDAPISQDTVDQQRAFGVEDPNAITANSRAFAVMVRNLMFRMVQLFAAEEEE FT KLEALTDYLDEQPDFSEALDVYFDEYSDLDVGPDARGREYFLLKKDGRIWSVRQIIKDP FT NDDRAFSFAATVDLNASDAADEVRFAKFSIDS" FT misc_feature 48390..48860 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 48408..48953 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 49158..49418 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT stem_loop 50853..50910 FT /note="Score 81: 27/27 (100%) matches, 0 gaps" FT CDS complement(50922..51446) FT /transl_table=11 FT /locus_tag="DIP1419" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis AhpD protein FT or Rv2429 or MT2504 or MTCY428.17c SW:AHPD_MYCTU (Q57353) FT (177 aa) fasta scores: E(): 1.5e-38, 59.53% id in 173 aa, FT and to Streptomyces viridosporus hypothetical 18.8 kDa FT protein AhpX TR:Q9X5V1 (EMBL:AF127576) (174 aa) fasta FT scores: E(): 1.5e-28, 49.13% id in 173 aa" FT /db_xref="GOA:Q6NGT4" FT /db_xref="HSSP:1KNC" FT /db_xref="InterPro:IPR003779" FT /db_xref="InterPro:IPR004674" FT /db_xref="InterPro:IPR004675" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGT4" FT /protein_id="CAE49950.1" FT /translation="MSLDNLKSGLPEYAKDLKLNLGSLARSTELTEQQLWGTFLAVAAA FT TRNEAVFSEISEEASEHLSEEAINAALGAASIMAMNNVAYRAKGWLGDDYAQVKMGLRM FT NIIAKPGVDKVDFELWSLAVSTVNGCEHCTIAHEKTVRSEGLTKEQIFEAVKIAATLQG FT VAQAIEIEASR" FT misc_feature complement(50931..51209) FT /note="HMMPfam hit to PF02627, Carboxymuconolactone FT decarboxylase" FT CDS complement(51449..52045) FT /transl_table=11 FT /gene="dirA" FT /locus_tag="DIP1420" FT /product="iron repressible polypeptide (putative FT reductase)" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae iron repressible polypeptide FT DirA TR:Q46025 (EMBL:U18620) (198 aa) fasta scores: E(): FT 8.8e-79, 98.99% id in 198 aa, and to Mycobacterium FT smegmatis alkyl hydroperoxide reductase C AhpC TR:Q57529 FT (EMBL:U43719) (195 aa) fasta scores: E(): 5.2e-52, 66.12% FT id in 186 aa" FT /db_xref="GOA:Q6NGT3" FT /db_xref="InterPro:IPR000866" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR017936" FT /db_xref="UniProtKB/TrEMBL:Q6NGT3" FT /protein_id="CAE49951.1" FT /translation="MSILTVGEKFPEFNLTALKGGDLHDVNASQPEDYFETVSLDKYEG FT KWKVVFFYPKDFTFVCPTEIAAFGKLDEEFQDRDTQILGGSIDNEFSHFNWRATHPELK FT TVPFPLFSDIKHDLIKALGVENEEGVADRATFIIDPDGIIQFVSVTPDAVGRNVDEVLR FT VLDALQSEEVCACNWQKNDPTKNIDKFAELEKGLN" FT misc_feature complement(51557..52030) FT /note="HMMPfam hit to PF00578, AhpC/TSA family" FT RBS complement(52050..52055) FT CDS 52271..53209 FT /transl_table=11 FT /locus_tag="DIP1421" FT /product="Putative transcriptional regulator" FT /note="Similar to Erwinia carotovora hydrogen FT peroxide-inducible genes activator OxyR SW:OXYR_ERWCA FT (P71318) (302 aa) fasta scores: E(): 1.6e-34, 37.5% id in FT 296 aa, and to Escherichia coli hydrogen peroxide-inducible FT genes activator OxyR or MomR or Mor or B3961 or Z5519 or FT ECS4890 SW:OXYR_ECOLI (P11721) (305 aa) fasta scores: E(): FT 7e-34, 37.8% id in 291 aa" FT /db_xref="GOA:Q6NGT2" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="UniProtKB/TrEMBL:Q6NGT2" FT /protein_id="CAE49952.1" FT /translation="MSNKEYRPTLAQLRTFATIAENKHFGTAAAKLSISQPSLSQALAA FT LENGLGVQLIERSTRRVIVTPAGEMLLPYAKATLDAADAFLAHAHGASGTLSGPMSLGI FT IPTIAPYILPNLLDAVRDEFPDLELRIVEEQTKHLIALLRDGHIDCAILALPTEQIGFT FT EMPLYVEDFRMVTTEDHPLAHRNDLTLSHLKELDLLLLDDGHCLRDQIVDLCRHVDVNP FT THSKAAETRAASLTTVMQLVSAGMGATLVPESSVSIECSRPGLATATFAPEVSASRQVG FT MVYRTSSSRTEEFQKLGSIVGQAFQDVIAQN" FT misc_feature 52298..52726 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family" FT misc_feature 52337..52402 FT /note="Predicted helix-turn-helix motif with score 1206 FT (+3.29 SD) at aa 23-44, sequence KHFGTAAAKLSISQPSLSQALA" FT misc_feature 52340..52432 FT /note="ScanRegExp hit to PS00044, Bacterial regulatory FT proteins, lysR family signature." FT misc_feature 52343..52378 FT /note="FPrintScan hit to PR00039, LysR bacterial regulatory FT protein HTH signature" FT misc_feature 52376..52408 FT /note="FPrintScan hit to PR00039, LysR bacterial regulatory FT protein HTH signature" FT misc_feature 52406..52441 FT /note="FPrintScan hit to PR00039, LysR bacterial regulatory FT protein HTH signature" FT CDS complement(53265..54230) FT /transl_table=11 FT /locus_tag="DIP1422" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGT1" FT /protein_id="CAE49953.1" FT /translation="MTTPRNPFDPQDNEYEPYPSTSHPEDRGFNVPADGYPTSSPLGSY FT SGSYAGYGSGASSAGEQKFHKDLKDPFVEHAGKADIFAAIEYGFRIVFKKPLWILGAFL FT ILAVVGVGTATATYLSFGASGGFEDPSAVPDPSIRGTDFLVNFGSILIAAFGIRLVLLQ FT LDGLPITLGEVFTKARWLKTTATEFLIFILLLIPMGISIAVLFVTAFNLQTGGSWVPFV FT LVLVLILVVATFISPFFTYAPYFVCDGRASVIEGIRLGFVQVSKNYWQAVGFSVFNFLI FT STFGLLITLGLGAIIIVPAMMNAQAHMYRQIAQGTVPLKA" FT misc_feature complement(order(53337..53402,53505..53570,53601..53666, FT 53745..53801,53874..53939)) FT /note="5 probable transmembrane helices predicted for FT DIP1422 by TMHMM2.0" FT CDS 54358..58311 FT /transl_table=11 FT /locus_tag="DIP1423" FT /product="Putative ATP-dependent helicase" FT /note="Similar to Escherichia coli ATP-dependent helicase FT HrpA or B1413 SW:HRPA_ECOLI (P43329) (1300 aa) fasta FT scores: E(): 1.7e-172, 46.92% id in 1315 aa, and to Vibrio FT cholerae ATP-dependent helicase HrpA VC1382 TR:Q9KS77 FT (EMBL:AE004217) (1309 aa) fasta scores: E(): 2.3e-171, FT 47.6% id in 1317 aa" FT /db_xref="GOA:Q6NGT0" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR007502" FT /db_xref="InterPro:IPR010222" FT /db_xref="InterPro:IPR011709" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014021" FT /db_xref="UniProtKB/TrEMBL:Q6NGT0" FT /protein_id="CAE49954.1" FT /translation="MFIMGKRNLKHSNRRVKPTTQDSPEVKELKASCMSQLSGLGLALH FT RSFERRITKAHSTKALEAIAQDLATALKSIEKRRSSIPVISYPDNLPVSSQRDEIAAAI FT QENQVVIIAGETGSGKTTQIPKICLDLGHGITGLIGHTQPRRLAARTVAERIADELDQP FT IGESVGYAIRFDDRVSPSTCIKLMTDGILLAEMQRDRYLNAYDTIIIDEAHERSLNIDF FT ILGYLKQLLPKRPDLKVIITSATIDPERFAHHFSDENGTPAPIIEVSGRTYPVEVLYRP FT LQLEDGTSLIDVDPIDGLISAIKELMSYGDGDILCFFAGESDIRDAMEAIKEQRWRNVE FT VTPLFGRLSNQEQHKVFTSHTGRRIVLATNIAETSLTVPGIHFVVDLGTARISRYSSRT FT KVQRLPIEPISQASARQRSGRCGRVADGIAIRLYSEEDFLSRPEFTDPEILRTNLANVI FT LQMASLRLGHIDDFPFIQAPDTKSIRDGILLLHELGALTTTDTRTDLPRLTTIGKTLAR FT IPLDPRLGRMLIEAERLGCLAHVMVLVAALSIQDVRERPLDYQAQADQLHARFKDPQSD FT FSSYLKLWAYINQRRDELSGNAFKKVMQQEFLHYMRIREWFDLVRQLKSIGEQVGWKSF FT ERSDATDNDCIHQALLAGLLSHIGIKEGDFREFVGARNTRFMVFPGSSLAKKPPQFVMA FT GELVETSRLWARDVAAIDPRWVEPLAQNLLKHQYSEPHWSLKRGAAMVYQRSTLYGVPI FT VVDRLINLATIDAVGAREIFIREALINGQWTTHHSFFKNNMQKLEAVNTLEEKARRRDI FT VVTEDTLYEFYNDRLPQSVVSTRAFDHWWKKTRTQTPDLLDFDPDKLISDSAEEVNAER FT YPDSWYDNGVELELRYRFEPGHPDDGVTVNVPVPYLASLEESGFEWLVPGFIQELLTAS FT LKTLPKHLRKKIVPAPNYANLIQPRISFRKGPLTQAITNALKDAGITGIEAEDFDLSAL FT PDHLRITFAAIDKHGKVIDKDKNLARLKTRQKNKIRASALKIGKAVHQSAVTTWTSSTL FT GKIPEEVSTKVDGQLIKTYPALVIGEQGFSVEAKPTRAEADASMLTATLAMLMKASNIN FT TQKMLNGLPLQQRVAVENYPHGSSNGLVQDVKAAVIRDLLIERGGPVRSPEEFDVLKKE FT ITPKVPRLTRQAVVQLAPSINCYLKTRDEVAHWEGDAIDDISRQLDFLLPPFAVSHHGI FT RHLARLPRLCEAITIRLDSMSRDSYKDAELQLVINRLENALYAKANRGGIPKSKINDIA FT WKIQELRVSLFAQRLGTAEKVSERKIHKLIEAL" FT misc_feature 54622..55191 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 54697..54720 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 54772..55653 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 55339..55632 FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature 55342..55632 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT stem_loop 58310..58364 FT /note="Score 60: 20/20 (100%) matches, 0 gaps" FT CDS complement(58374..58829) FT /transl_table=11 FT /locus_tag="DIP1424" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 17.2 kDa protein Rv2718c or MT2791 or MTCY05A6.39c FT SW:YR18_MYCTU (O07217) (154 aa) fasta scores: E(): 1.3e-35, FT 69.65% id in 145 aa, and to Bacillus subtilis hypothetical FT protein YtcG SW:YTCG_BACSU (Q45549) (152 aa) fasta scores: FT E(): 1.4e-21, 42% id in 150 aa" FT /db_xref="GOA:Q6NGS9" FT /db_xref="InterPro:IPR003796" FT /db_xref="InterPro:IPR005144" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGS9" FT /protein_id="CAE49955.1" FT /translation="MYCPFCHNDQSRVIDSRVIDSGSAIRRRRECTQCKNRFTTVEKAQ FT LLVVKRNGLTEPFSREKVIVGVRRACQGRDVSDDALKRLAQQVEERVRLHGSSQIHANE FT IGLAILEPLRELDEVAYLRFASVYKSFESADDFESEIRLMRRRDRSN" FT misc_feature complement(58392..58823) FT /note="HMMPfam hit to PF02644, Uncharacterized BCR, FT COG1327" FT CDS complement(58927..59262) FT /transl_table=11 FT /locus_tag="DIP1425" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGS8" FT /protein_id="CAE49956.1" FT /translation="MSISYVLSASKSHDGRRVEVGPASEMWDISAFTPTVSEQSVRTLS FT HAGPYGEGQESKPHLNEEVSQSFGHKVRNALIGALLGLIVATSFIAVDGMMHPEEMASV FT GSGAVAK" FT misc_feature complement(58972..59037) FT /note="1 probable transmembrane helix predicted for DIP1425 FT by TMHMM2.0" FT CDS 59602..60315 FT /transl_table=11 FT /gene="lexA" FT /locus_tag="DIP1426" FT /product="transcriptional repressor" FT /EC_number="3.4.21.88" FT /note="Similar to Mycobacterium tuberculosis LexA repressor FT or Rv2720 or MT2793 or MTCY05A6.41 SW:LEXA_MYCTU (Q50765) FT (217 aa) fasta scores: E(): 1.1e-21, 56.75% id in 222 aa, FT and to Rhodobacter sphaeroides LexA repressor SW:LEXA_RHOSH FT (Q9ZFA4) (228 aa) fasta scores: E(): 1.1e-14, 31.85% id in FT 226 aa" FT /db_xref="GOA:P61607" FT /db_xref="InterPro:IPR006197" FT /db_xref="InterPro:IPR006199" FT /db_xref="InterPro:IPR006200" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/Swiss-Prot:P61607" FT /protein_id="CAE49957.1" FT /translation="MPVKDSSSNKKNQIGKLSERQRRILEVITDAVSLRGYPPSIREIG FT DAAGLQSTSSVAYQLKELEKKGYLRRDPNKPRAVDVRALPDPIPSKPGRKPGPKKSSVA FT ISPDPAETSPTSFVPIVGSIAAGNPILAEENVDGYFPFPSEIVGDGDLFMLQVEGESMR FT DAGILHHDWVVVRSQPVAEQGEFVAALIEGEATVKEFHSDSSGVWLLPHNDAFDPIPAE FT HAEIMGKVVSILRKL" FT misc_feature 59641..59835 FT /note="HMMPfam hit to PF01726, LexA DNA binding domain" FT misc_feature 59911..60276 FT /note="HMMPfam hit to PF00717, Peptidase family S24" FT misc_feature 60058..60090 FT /note="FPrintScan hit to PR00726, Repressor LexA serine FT protease (S24) family signature" FT misc_feature 60091..60126 FT /note="FPrintScan hit to PR00726, Repressor LexA serine FT protease (S24) family signature" FT misc_feature 60175..60213 FT /note="FPrintScan hit to PR00726, Repressor LexA serine FT protease (S24) family signature" FT CDS 60638..61414 FT /transl_table=11 FT /locus_tag="DIP1427" FT /product="Putative sugar related operon transcriptional FT regulator (PTS system)" FT /note="Similar to Streptomyces coelicolor putative FT DeoR-family transcriptional regulator SCE22.15c TR:Q9KYU7 FT (EMBL:AL355832) (253 aa) fasta scores: E(): 9.3e-31, 44.85% FT id in 243 aa, and to Escherichia coli galactitol FT utilization operon repressor GatR or B2087/B2090 FT SW:GATR_ECOLI (P36930) (259 aa) fasta scores: E(): 3.9e-20, FT 35.76% id in 260 aa. Note: Similar also to the downstream FT CDIP1429 267 aa, 41.634% identity in 257 aa overlap" FT /db_xref="GOA:Q6NGS7" FT /db_xref="InterPro:IPR001034" FT /db_xref="InterPro:IPR014036" FT /db_xref="UniProtKB/TrEMBL:Q6NGS7" FT /protein_id="CAE49958.1" FT /translation="MYSEERRRQIASLTAVEGRVNVTELAARFDVTAETIRRDLAVLDR FT EGVVHRVHGGAVANQTFQTAEFSLDTRSRSASGAKNSIAHAALSYLPEAQGGLFLDAGT FT TTAALAELLAAQPFAKHWSIVTNSLSIALTLANSGLDEIQLLGGSVRAITQAVVGDTAL FT RTLALMRADVAFIGTNALTIDHGLSTADSQEAAIKSAMITNAHKVVVLCDSTKMGTDYL FT VSFGSISDIDVIITDANAPESFVKALRDRDVEVIIA" FT misc_feature 60638..67870 FT /note="Putative PTS system" FT misc_feature 60653..60811 FT /note="HMMSmart hit to SM00420, helix_turn_helix, FT Deoxyribose operon repressor, DNA-binding" FT misc_feature 60653..61348 FT /note="HMMPfam hit to PF00455, Bacterial regulatory FT proteins, deoR family" FT misc_feature 60695..60760 FT /note="Predicted helix-turn-helix motif with score 1468 FT (+4.19 SD) at aa 20-41, sequence VNVTELAARFDVTAETIRRDLA" FT misc_feature 60707..60751 FT /note="FPrintScan hit to PR00037, LacR bacterial regulatory FT protein HTH signature" FT misc_feature 60749..60805 FT /note="FPrintScan hit to PR00037, LacR bacterial regulatory FT protein HTH signature" FT stem_loop complement(61444..61495) FT /note="Score 72: 24/24 (100%) matches, 0 gaps" FT CDS complement(61508..63202) FT /transl_table=11 FT /gene="ptsI" FT /locus_tag="DIP1428" FT /product="phosphoenolpyruvate:sugar phosphotransferase FT system enzyme I (PTS system)" FT /note="Similar to Corynebacterium glutamicum FT phosphoenolpyruvate:sugar phosphotransferase system enzyme FT I PtsI TR:AAK76445 (EMBL:AF392620) (565 aa) fasta scores: FT E(): 2.9e-159, 76.69% id in 562 aa, and to Xanthomonas FT campestris multiphosphoryl transfer protein FruB FT SW:PTF1_XANCP (P45597) (837 aa) fasta scores: E(): 1.4e-50, FT 37.2% id in 559 aa" FT /db_xref="GOA:Q6NGS6" FT /db_xref="InterPro:IPR000121" FT /db_xref="InterPro:IPR006318" FT /db_xref="InterPro:IPR008279" FT /db_xref="InterPro:IPR008731" FT /db_xref="InterPro:IPR015813" FT /db_xref="InterPro:IPR018274" FT /db_xref="UniProtKB/TrEMBL:Q6NGS6" FT /protein_id="CAE49959.1" FT /translation="MNNVMTDTIIKGTGVVSGVRYAKAVWISPRPKLPQAGEVVDEADR FT AQQLDNFVAAADAVAQRLLDRSEHAEGAASEVLKATAGMVKDRGWQKAVKKGIQGGHPA FT EYAVVAATTKFVSMFEAAGGVMAERTTDLRDIRDRVIAELRGDLEPGLPDVHEQVVLFA FT DDLSPADTAALNTDYFVGLVTELGGPTSHTAIIARQLNVPCIVATGEKIHKIEVGTDVL FT IDGALGTVTLDADPETARAAELESRMLAERIAQWKGPAETKDGHRVQLLANVQDGKAAR FT IAATESQAEGIGLFRTEMCFLTATEEPSVDEQAAVYKKVLEQFPDSKVVVRSLDAGSDK FT PVAFASMADEMNPALGVRGLRVARANESLLTRQLDAIAQAAHELGRDENSPTWVMAPMV FT ATTREARWFAGLCAERGLTAGAMIEVPAASLMADKLMPYLDFVSIGTNDLTQYTMAADR FT MSPQLAYLTDPWQPAVLRLIKHTCEEGKRFNTAVGVCGEAAADPLLACVLTGLGVNSLS FT AASTAIAGVGAQLASVDFETCVRAAEAAVNAEGAIDARAAVRKVLQP" FT misc_feature complement(61592..62470) FT /note="HMMPfam hit to PF02896, PEP-utilizing enzyme, TIM FT barrel domain" FT misc_feature complement(61712..62725) FT /note="BlastProDom hit to PD000940, PD000940" FT misc_feature complement(61829..61885) FT /note="ScanRegExp hit to PS00742, PEP-utilizing enzymes FT signature 2." FT misc_feature complement(62519..62782) FT /note="HMMPfam hit to PF00391, PEP-utilizing enzyme, mobile FT domain" FT misc_feature complement(62609..62644) FT /note="ScanRegExp hit to PS00370, PEP-utilizing enzymes FT phosphorylation site signature." FT CDS 63470..64273 FT /transl_table=11 FT /locus_tag="DIP1429" FT /product="Putative sugar related operon transcriptional FT regulator (PTS system)" FT /note="Similar to Spiroplasma citri transcriptional FT regulator FruR TR:Q9RMF6 (EMBL:AF202665) (233 aa) fasta FT scores: E(): 7.3e-17, 33.75% id in 237 aa, and to FT Escherichia coli galactitol utilization operon repressor FT GatR or B2087/B2090 SW:GATR_ECOLI (P36930) (259 aa) fasta FT scores: E(): 4e-13, 30% id in 240 aa. Note: Similar also to FT the upstream CDIP1427 258 aa, 41.634% identity in 257 aa FT overlap" FT /db_xref="GOA:Q6NGS5" FT /db_xref="InterPro:IPR001034" FT /db_xref="InterPro:IPR014036" FT /db_xref="UniProtKB/TrEMBL:Q6NGS5" FT /protein_id="CAE49960.1" FT /translation="MATVEEVNLRQATIVSLTNETGRSSVTQLAQQFDVTPETIRRDLK FT SLEQQGLLRRVHGGAVSGSPKLNVDVFAVDDDDDLPIHQSQRRKQSIALTALSLIPGPE FT ASIFIDAGSTTETFANVLARTYLGQNWLVVTTSPNVARTLSSAGVPDVIMVGGFVKART FT QAIVGPHAIETLHSMRADIAFLGTNGIDPHKGFTTSDEREAKVKHEMIAHAQTSVILCD FT SGKIGHSSAVSFAQLADVDFVVTDRNSPPQLSRQLGEPNLQVVIP" FT misc_feature 63497..63655 FT /note="HMMSmart hit to SM00420, helix_turn_helix, FT Deoxyribose operon repressor, DNA-binding" FT misc_feature 63497..64207 FT /note="HMMPfam hit to PF00455, Bacterial regulatory FT proteins, deoR family" FT misc_feature 63539..63604 FT /note="Predicted helix-turn-helix motif with score 1839 FT (+5.45 SD) at aa 24-45, sequence SSVTQLAQQFDVTPETIRRDLK" FT misc_feature 63551..63595 FT /note="FPrintScan hit to PR00037, LacR bacterial regulatory FT protein HTH signature" FT misc_feature 63593..63649 FT /note="FPrintScan hit to PR00037, LacR bacterial regulatory FT protein HTH signature" FT CDS 64270..65235 FT /transl_table=11 FT /locus_tag="DIP1430" FT /product="Putative phosphofructokinase (PTS system)" FT /note="Similar to Rhodobacter capsulatus FT 1-phosphofructokinase FruK SW:K1PF_RHOCA (P23386) (316 aa) FT fasta scores: E(): 1.2e-05, 32.6% id in 322 aa, and to FT Escherichia coli 6-phosphofructokinase isozyme 2 PfkB or FT B1723 SW:K6P2_ECOLI (P06999) (309 aa) fasta scores: E(): FT 0.00069, 30.51% id in 308 aa" FT /db_xref="GOA:Q6NGS4" FT /db_xref="InterPro:IPR002139" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="InterPro:IPR017583" FT /db_xref="UniProtKB/TrEMBL:Q6NGS4" FT /protein_id="CAE49961.1" FT /translation="MILTFTPNPSIDKTLQLDSVLTRGAVQRLSGVQTVAGGKGINVAV FT ALAKAQADTVALYPAHPEDPFNKLIRESQIPAQRVTIRGEVRINTTVTEPDGTTTKLNI FT QGPQIHEDELQALQKNLLERTARCSWAVLAGSLPPGVPTDWYVHLTKLLNARHPSLRIA FT IDTSDVPLQKVGESFGNCALSLIKPNGMELGQLVGLDGYVLEKEAAQGNFDPVVSAARK FT AILQGVENVLVTLGAAGAVLVTKDHAWKATPPPITVLSTVGAGDASLAGFILASEDGLP FT PEKCLAQAVAYGAAAASFAGTHMPYPHQIDVNHTPVTLLS" FT misc_feature 64282..65196 FT /note="HMMPfam hit to PF00294, pfkB family carbohydrate FT kinase" FT misc_feature 64363..64422 FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT misc_feature 64960..64995 FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT misc_feature 65047..65088 FT /note="ScanRegExp hit to PS00584, pfkB family of FT carbohydrate kinases signature 2." FT CDS join(65439..65780,65834..66319,66424..66717,66720..67094, FT 67110..67358) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1431" FT /product="Putative fructose-specific IIBC (PTS system) FT (pseudogene)" FT /note="Pseudogene. Similar to Escherichia coli PTS system, FT fructose-specific IIBC component FruA or PtsF or B2167 FT SW:PTFB_ECOLI (P20966) (563 aa) fasta scores: E(): 2.4e-58, FT 43.86% id in 481 aa, and to Rhodobacter capsulatus PTS FT system, fructose-specific IIBC component FruA SW:PTFB_RHOCA FT (P23387) (578 aa) fasta scores: E(): 2.5e-57, 38.86% id in FT 584 aa. Presents multiple frameshifts at residues 114, 276 FT and 374" FT /db_xref="PSEUDO:CAE49962.1" FT misc_feature 65439..65789 FT /note="HMMPfam hit to PF00359, FT Phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 2" FT misc_feature 65463..65756 FT /note="BlastProDom hit to PD001689, PD001689" FT misc_feature 65888..66151 FT /note="HMMPfam hit to PF02379, PTS system, Fructose FT specific IIB subunit" FT misc_feature join(66239..66319,66424..66460,66711..66779,66798..66866, FT 66924..66992,67116..67190,67227..67295) FT /note="1 probable transmembrane helix predicted for DIP1434 FT by TMHMM2.0" FT /note="3 probable transmembrane helices predicted for FT DIP1433 by TMHMM2.0" FT /note="2 probable transmembrane helices predicted for FT DIP1432 by TMHMM2.0" FT /note="Signal peptide predicted for DIP1434 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.737 between residues 25 and 26" FT misc_feature 66639..67103 FT /note="HMMPfam hit to PF02378, Phosphotransferase system, FT EIIC" FT RBS 67588..67594 FT CDS 67604..67870 FT /transl_table=11 FT /locus_tag="DIP1435" FT /product="Putative carbohydrate carrier protein (PTS FT system)" FT /note="Similar to Bacillus megaterium phosphocarrier FT protein HPr PtsH SW:PTHP_BACME (O69250) (88 aa) fasta FT scores: E(): 3e-06, 37.5% id in 80 aa, and to Bacillus FT subtilis phosphocarrier protein HPr PtsH SW:PTHP_BACSU FT (P08877) (87 aa) fasta scores: E(): 0.00032, 30.86% id in FT 81 aa" FT /db_xref="GOA:Q6NGS3" FT /db_xref="HSSP:1K1C" FT /db_xref="InterPro:IPR000032" FT /db_xref="InterPro:IPR001020" FT /db_xref="InterPro:IPR005698" FT /db_xref="UniProtKB/TrEMBL:Q6NGS3" FT /protein_id="CAE49963.1" FT /translation="MASKTVSVGSSVGLHARPASIIAEAAGEFDEDIFLTIEGEDDDET FT DAASSLMIMALGAEKGDKVTVTSENPEAVEKIAALIEKDLDAV" FT misc_feature 67604..67849 FT /note="HMMPfam hit to PF00381, PTS HPr component FT phosphorylation site" FT misc_feature 67640..67663 FT /note="ScanRegExp hit to PS00369, PTS HPR component FT histidine phosphorylation site signature." FT misc_feature 67640..67690 FT /note="FPrintScan hit to PR00107, Phosphocarrier protein FT signature" FT misc_feature 67724..67771 FT /note="FPrintScan hit to PR00107, Phosphocarrier protein FT signature" FT misc_feature 67769..67822 FT /note="FPrintScan hit to PR00107, Phosphocarrier protein FT signature" FT CDS 68035..69153 FT /transl_table=11 FT /locus_tag="DIP1436" FT /product="Putative oxidoreductase" FT /note="Similar to Streptomyces coelicolor putative FT oxidoreductase SCE15.13c TR:Q9X888 (EMBL:AL049707) (367 aa) FT fasta scores: E(): 1.8e-106, 72.11% id in 355 aa, and to FT Photorhabdus luminescens alkanal monooxygenase alpha chain FT LuxA SW:LXA1_PHOLU (P19839) (360 aa) fasta scores: E(): FT 2.5e-06, 25.87% id in 228 aa" FT /db_xref="GOA:Q6NGS2" FT /db_xref="InterPro:IPR011251" FT /db_xref="InterPro:IPR016048" FT /db_xref="UniProtKB/TrEMBL:Q6NGS2" FT /protein_id="CAE49964.1" FT /translation="MQFGIFTIGDVTTDPTTGVTPSEHDRINAMTQIALKAEEVGLDVF FT ATGEHHNPPFVPSSPTTHLAYIAAQTKNIQLSTSTTLITTNDPVKIAEDYAFLQHLSGG FT RVDLMMGRGNTGPVYPWFGKDIRKGIPLAVENYHLLRKLWREPVVNWKGEFRTPLQNYT FT STPAPLGDVPPFVWHGSIRSVQIAEQAAFYGDGFFHNNIFWNKEHTAQMVNIYRQRFEK FT YGHGRADQAIVGLGGQVFIGETEAEAKKFFRPYFDNAPVYGHGPSLEEFTELTPLTVGT FT VEQVIERTMQFADWVGDYQRQLFLIDHAGLPLEVVLNQIEILGTQVVPELRRRMEKRRP FT DHVPSDPPSHSFLKAHPEHPHFLVEPSKTSAQ" FT misc_feature 68035..69027 FT /note="HMMPfam hit to PF00296, Luciferase-like FT monooxygenase" FT CDS 69212..69877 FT /transl_table=11 FT /locus_tag="DIP1437" FT /product="Putative oxidoreductase" FT /note="Similar to Streptomyces coelicolor putative FT oxidoreductase SCE15.12c TR:Q9X887 (EMBL:AL049707) (222 aa) FT fasta scores: E(): 1.1e-26, 46.15% id in 221 aa, and to the FT middle region of Escherichia coli NAD SsuE or B0937 FT SW:SSUE_ECOLI (P80644) (191 aa) fasta scores: E(): 8.8e-09, FT 40.35% id in 114 aa" FT /db_xref="InterPro:IPR005025" FT /db_xref="PDB:3K1Y" FT /db_xref="PDB:3K20" FT /db_xref="UniProtKB/TrEMBL:Q6NGS1" FT /protein_id="CAE49965.1" FT /translation="MRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIE FT LSELIPDLMTAMTTRVHTTKLEEITSALSASDGLVVATPVFKASYTGLFKMFFDILDTD FT ALTGMPTIIAATAGSARHSLVLDYALRPLLSYMRAVVVPTGVFAATEDFGGPEGAEFNK FT RIARAAGELASLIVEESGNVGGLGGVTAEGQNVRNRHSGSDPLNELTNFEDMLKGHSG" FT stem_loop complement(69893..69936) FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(69939..71225) FT /transl_table=11 FT /locus_tag="DIP1438" FT /product="Putative transport membrane protein" FT /note="Similar to Escherichia coli O157:H7 uracil transport FT protein PyrP TR:Q9KX94 (EMBL:AP000422) (442 aa) fasta FT scores: E(): 5e-46, 45.97% id in 422 aa, and to Escherichia FT coli uracil permease UraA or B2497 or Z3760 or ECS3359 FT SW:URAA_ECOLI (P33780) (429 aa) fasta scores: E(): 6.2e-25, FT 40.9% id in 396 aa" FT /db_xref="GOA:Q6NGS0" FT /db_xref="InterPro:IPR006042" FT /db_xref="InterPro:IPR006043" FT /db_xref="UniProtKB/TrEMBL:Q6NGS0" FT /protein_id="CAE49966.1" FT /translation="MSTASWGWTLHGDGKTIAPGAVVAPEERLSWSRTIGIGMQHVIAM FT FGATLLVPTLTGFPVNTTLLFSGISTMVFLLITRNRLPSYLGSSFGFIAPLMASQGEGI FT GVQLGGVVATGLALILVGFIVKSAGRKVIDLVMPPAVTGAIVALIGLNLAPSAAGNFQS FT QPLVAVVTLASILLFTVAGRGMVARLGILIGVIIGWVFAAITGNLAEGASDSVREAAWI FT GFPQFHTPEFTTHAILVTLPVVIVLIAENVGHVKAVSEMTGRNLDDLAGDALIADGIGT FT TFAGAFGGSGTTTYAENIGVMAATKVYSTAAYWVAALTAVVLAFIPKFGALIFTIPTGV FT LGGAALVLYGLIGMLGVRIWQDNKVNFNNPVNLTAAAVALIAGIGNLTLVIGGIELQGI FT AWGSMGIIVFYPVLKWLYLRVGEGNNARF" FT misc_feature complement(order(69972..70028,70044..70109,70146..70211, FT 70224..70289,70461..70526,70587..70652,70668..70733, FT 70764..70829,70851..70916,70929..70979,70995..71060)) FT /note="11 probable transmembrane helices predicted for FT DIP1438 by TMHMM2.0" FT misc_feature complement(70050..71132) FT /note="HMMPfam hit to PF00860, Xanthine/uracil permeases FT family" FT CDS complement(71308..72918) FT /transl_table=11 FT /locus_tag="DIP1439" FT /product="Putative GTP-binding protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 53.3 kDa protein HflX or Rv2725c or MTCY154.05c TR:O33230 FT (EMBL:Z98209) (495 aa) fasta scores: E(): 4.6e-102, 63.75% FT id in 469 aa, and to Escherichia coli GTP-binding protein FT HflX or B4173 SW:HFLX_ECOLI (P25519) (426 aa) fasta scores: FT E(): 3.1e-45, 40.62% id in 416 aa" FT /db_xref="GOA:Q6NGR9" FT /db_xref="InterPro:IPR002917" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR016496" FT /db_xref="UniProtKB/TrEMBL:Q6NGR9" FT /protein_id="CAE49967.1" FT /translation="MTNNTFKNSELGAQSHILAGQGEKNYSSHDELLARAFRDHKPVSR FT SADDGEDFTGLIATKSVSEGHTNVSDHTPTVGELDLEARSSLRSLTRGSEIHATDQDDG FT YDVEYRKLRLERVILVGVWTKGTTAEIEANMNELASLAETAGADVVEVLYQKRDKPDPG FT TYIGSGKVSELKEIVSSTGVDTVICDGELSPSQMIALEKALDVKVIDRTMLILDIFAQH FT AKSKEGKAQVSLAQMEYLITRVRGWGGALSRQAGGRAGSNGGVGLRGPGETKIEADRRR FT LRSDMAKLRKEIAGMKTAREVKRSQRKQSTIPQIAIAGYTNAGKSSLINAMTGAGVLVE FT DALFATLDPTTRRAELADGRAVVFTDTVGFVRHLPTQLVESFRSTLEEVVDADLVLHVV FT DGSDPFPLKQIEAVNTVVSEIVRELKVDAPPEIIVVNKIDQADPLVLAELRHALDDVVF FT VSAKTAEGIPELEMRVEQFLNTLDTHVRLLVPYTRGDIVSRLHSNGTVLSEEYEAEGTL FT IDVRLPAAIAAELGELRVD" FT misc_feature complement(71719..71775) FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature complement(71914..71976) FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature complement(71941..71964) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 73065..73820 FT /transl_table=11 FT /locus_tag="DIP1440" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGR8" FT /protein_id="CAE49968.1" FT /translation="MSNDLLSIGMTFDKWQDAVEAAIATDNLTVTGEVRGGQLIQYTDE FT SGANINILAVEPFATFAGFQSATMTFAHVSMINDVLALCDIVDYNGESITSITCNLAQG FT PLLVDEPEQRWQQLGVTALAHNVALHATESEYLAANPNGHLGELISHGAAIVTEGNGSN FT IPDASAHFAARVLSAEYLTNTLTSEQFIHVTVDGNFPFDICLPASVPLPERDVILEADA FT VLVGSVVIPQGGGCGGGGGCGGGGCGCGH" FT misc_feature 73761..73814 FT /note="ProfileScan hit to PS50315, Glycine-rich region." FT CDS 73895..74419 FT /transl_table=11 FT /locus_tag="DIP1441" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGR7" FT /protein_id="CAE49969.1" FT /translation="MPEFAGLESSSRLPWWPYLVIALSCCVLIWLLKTPGIFLSIILFI FT AIYYMIDHRPNSAEIDSLRSSVILSVEDIEDIEAQYNRFAHGSDTSSIADRTLKRPELL FT NTFSTVPEIESFHYLLSNSDRFIQRVRLHLNTSLNTSQLEKLLDITDQRASQLQQAWID FT ARRAARRYTEN" FT misc_feature 73937..74038 FT /note="1 probable transmembrane helix predicted for DIP1441 FT by TMHMM2.0" FT misc_feature 74306..74371 FT /note="Predicted helix-turn-helix motif with score 1009 FT (+2.62 SD) at aa 138-159, sequence LNTSQLEKLLDITDQRASQLQQ" FT CDS complement(74428..75321) FT /transl_table=11 FT /gene="dapF" FT /locus_tag="DIP1442" FT /product="diaminopimelate epimerase" FT /EC_number="5.1.1.7" FT /note="Similar to Mycobacterium leprae diaminopimelate FT epimerase DapF or ML0996 or B2235_C3_233 SW:DAPF_MYCLE FT (P46814) (296 aa) fasta scores: E(): 1.9e-55, 55.39% id in FT 278 aa, and to Escherichia coli diaminopimelate epimerase FT DapF or B3809 SW:DAPF_ECOLI (P08885) (274 aa) fasta scores: FT E(): 2.9e-07, 31.16% id in 292 aa" FT /db_xref="GOA:Q6NGR6" FT /db_xref="InterPro:IPR001653" FT /db_xref="InterPro:IPR018510" FT /db_xref="UniProtKB/TrEMBL:Q6NGR6" FT /protein_id="CAE49970.1" FT /translation="MTYMNTHDAQLPVYKGHGTENDFVIIPDLDAKIELTPDFIAALCD FT RRSGIGGDGLLRVATAQALLKSGVLAALPDGVAATDVFMDYYNADGSTAQMCGNGTRVF FT AHWVRAHGIKDEDEFVVGTRAGARFVKVRSFDDSQAEVTVDMGSAEVTGVSTCTIGSQQ FT FAGLGVDMGNPHLACVVPGYGQEDIENLDLVKPLFDPKFFPEGVNVEIATPLVQGVTHM FT RVFERGVGETRSCGTGTVATARAALADAGHADGEVVVVVPGGKVRVTIQGDESTLTGPS FT RIVASGYINLAGLKKN" FT misc_feature complement(74449..75282) FT /note="HMMPfam hit to PF01678, Diaminopimelate epimerase" FT misc_feature complement(75016..75060) FT /note="ScanRegExp hit to PS01326, Diaminopimelate epimerase FT signature." FT CDS complement(75318..76226) FT /transl_table=11 FT /gene="miaA" FT /locus_tag="DIP1443" FT /product="tRNA delta(2)-isopentenylpyrophosphate FT transferase" FT /EC_number="2.5.1.8" FT /note="Similar to Mycobacterium tuberculosis tRNA FT delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) FT MiaA or Rv2727c or MT2799 or MTCY154.07c SW:MIAA_MYCTU FT (O33232) (314 aa) fasta scores: E(): 8.2e-58, 57.58% id in FT 290 aa, and to Escherichia coli tRNA FT delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) FT MiaA or TrpX or B4171 SW:MIAA_ECOLI (P16384) (316 aa) fasta FT scores: E(): 9.7e-32, 38.77% id in 294 aa" FT /db_xref="GOA:Q6NGR5" FT /db_xref="InterPro:IPR002627" FT /db_xref="InterPro:IPR018022" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGR5" FT /protein_id="CAE49971.1" FT /translation="MDNPTTPIAVVGPTASGKSALGVSLAHHLNGEVVNVDSMQLYKGM FT DIGTAKLTLEEREGIVHHLLDVWDISETASVARYQSQAIAVVEDIQRRGKTPILVGGSM FT LYVQSLVDDWQFPPTDPSVRAKWESKLNEVGVEALHALLAQKDPQAASIIELKDPRRTV FT RALEVIELTGKPFNASQPPKNAPPRWNTQIIGLGTNTEWLNPRIDLRTELMFEKGFVHE FT VENLVGKGLIADSTAGHAIGYAQVLQHFAGELSVDEMIEHTKIGTRRYVRRQRSWFKRD FT PRIHWIDASGDTFSMALSLLS" FT misc_feature complement(75357..76112) FT /note="HMMPfam hit to PF01715, IPP transferase" FT misc_feature complement(75360..76112) FT /note="BlastProDom hit to PD004674, PD004674" FT misc_feature complement(76170..76193) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(76289..76984) FT /transl_table=11 FT /locus_tag="DIP1444" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGR4" FT /protein_id="CAE49972.1" FT /translation="MGSETDVIHNMFSTDPTWILLVPSGPVVITELSPFEPISQLIRTA FT VDDILHELNPKTIRIIFSLRDAEYTAHTGSFRAWGGRKTAVSAGNYLPELVVRFLIGRY FT LEHNSNVEVLTGSGLRDAKPNELIVYAVDGPAALTQRAPLGFNPKAAEFHDAIVNCLSQ FT ASNNDTVKPTWLQSATKTTSKDDLLRAGVVNPSQWLELFQYSYSSVQLLLSDSTLGVGR FT YVALLQPCS" FT CDS 77182..78510 FT /transl_table=11 FT /locus_tag="DIP1445" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 49.8 kDa protein MT2802 TR:AAK47120 FT (EMBL:AE007108) (450 aa) fasta scores: E(): 5.4e-66, 48.52% FT id in 441 aa" FT /db_xref="InterPro:IPR007139" FT /db_xref="UniProtKB/TrEMBL:Q6NGR3" FT /protein_id="CAE49973.1" FT /translation="MSTPHTPKPGPRPGAVPGPRPGAHAARKVVAPNVSAMNQARAFGR FT VDDDGTVYLIRGGETKKIGSWQAGTPEEGLQHYIHRFEDLATEVALLESRLKSHPNDAS FT HIKEKAGEIRDGLDDAAIIGDLDSLEKRLNSIIDGADSAGEKARELKQQLQEKAIEQKQ FT KLVAEAEEIAEKSTDWKVAGDRIREILDEWKTIKGIDRKTDDELWKLYSRARDSFNRRR FT GSHFAELDRGRAAARRIKEDLVEKANILKESTDWNDTAHAFKELMNEWKAAGRAPRDVD FT DKLWAAFKGAQDYFFNARNAVNDQRDREFAANAEAKDALIDEYTPLIDPAQGLESAREK FT LRELQEKWEAIGYVPRNRVREYEEKIANLEKRVTEAADAQWRRTDPAAQARAAQFISKV FT EEFTAQAAEAEVKGNTKKAEQLRAQAQQWQEWADAAINAVENR" FT stem_loop 78569..78609 FT /note="Score 54: 18/18 (100%) matches, 0 gaps" FT CDS 78698..79723 FT /transl_table=11 FT /locus_tag="DIP1446" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6NGR2" FT /protein_id="CAE49974.1" FT /translation="MAAQDITGDIATSCSATTVLAALQGSYAQYSRIFGVFSVENNAVQ FT NKHKNSILNLPSTTDDSPSDVAGFPLAYVETEVYLAADTKVLAANIVLDAELQPLEDED FT LDEEAQQALTRCFDLLSETALEMRRPIIHVQLPYGKVATSAHNFCVNQLMQHGYRLAHE FT EIHGYVVMPLALERVENIHTECFENSEFPDEIIPGILELLNQSNTDIPTGDLLRQPQPW FT TLQRLQQSATEHKKRGNRTLTTVLRDDSGCVLALSEALQRCHSSADLAEQGITIVDCDH FT RNQGYGTRVKAAALKNIHNNWPKVKRVFSDYSSHNTRMGSINSRLGFQRVSATQIWQLT FT L" FT CDS complement(79732..80370) FT /transl_table=11 FT /locus_tag="DIP1447" FT /product="Putative membrane protein" FT /note="Low similarity to Mycobacterium tuberculosis CDC1551 FT hypothetical 19.3 kDa protein MT2802.1 TR:AAK47121 FT (EMBL:AE007108) (180 aa) fasta scores: E(): 3.3e-07, 25.68% FT id in 183 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGR1" FT /protein_id="CAE49975.1" FT /translation="MSESSGSATEQELRIKEIQAARFVHVGRIQWLLIGAWTLFAVGLV FT LPHSGNAQGWQVLTFSSAAADSGVKLAEYIFVLIGFIAAIVCNLFLILTRRTVAANIGF FT LLSGIALLMSLFAMWMRLQSKENEGFSGIGIGFGIEILAVVVLVYALSALVFSKSEEQR FT QIEHLRATTEVTDEVACVQRDLQNQRKGENNPLLVDNRRRQAAEKRRSK" FT misc_feature complement(order(79900..79965,80011..80076,80092..80157, FT 80233..80298)) FT /note="4 probable transmembrane helices predicted for FT DIP1447 by TMHMM2.0" FT CDS complement(80420..81970) FT /transl_table=11 FT /locus_tag="DIP1448" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 55.1 kDa protein Rv2733c or MT2803 or MTCY154.13c FT SW:YR33_MYCTU (O33238) (512 aa) fasta scores: E(): FT 2.7e-130, 67.67% id in 498 aa, and to Bacillus subtilis FT hypothetical 58.2 kDa protein in klb-cotE intergenic region FT YmcB SW:YMCB_BACSU (O31778) (509 aa) fasta scores: E(): FT 4.9e-65, 39.61% id in 462 aa" FT /db_xref="GOA:Q6NGR0" FT /db_xref="InterPro:IPR002792" FT /db_xref="InterPro:IPR005839" FT /db_xref="InterPro:IPR006463" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013848" FT /db_xref="InterPro:IPR020612" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGR0" FT /protein_id="CAE49976.1" FT /translation="MFNDIESHRVPNVGQGRSFEVRTFGCQMNVHDSERLSGLLEEAGY FT HAVADGEEPDLVVFNTCAVRENADKRLYGTLGQLRSAKEKNPRMQIAVGGCLAQKDKDT FT VVAKAPWVDAVFGTHNMGALPSLLSRSEHNKRAEVEIVDSLEQFPSVLPAKRESAYAGW FT VSVSVGCNNTCTFCIVPSLRGKEVDRRPGDILAEVQALVDQGVSEVTLLGQNVNAYGVN FT FSDPDIQRDRFAFSKLLRACGKIEGLERLRFTSPHPAEFTHDVIDAMAETPNVCPQLHM FT PLQSGSDKVLKEMRRSYRSKKFLGILEEVRAKIPHASITTDIIVGFPGETEEDFQETLN FT VVEKARFTSAYTFQYSPRPGTPAADYADQVPKEVVQDRYERLLALQERISTEENAKLIG FT TEVELLVQASGGRKNDKTQRMTGRSRDGRLVHFDPQGHVDGDIRPGDVITTVVTEAKPF FT FLIADSGVLQHRRTKAGDMSAAGKVPTTAPVGVGLGLPSIGSPAQKRSETSKSSGCGC" FT misc_feature complement(81419..81481) FT /note="ScanRegExp hit to PS01278, Uncharacterized protein FT family UPF0004 signature." FT misc_feature complement(81620..81919) FT /note="HMMPfam hit to PF00919, Uncharacterized protein FT family UPF0004" FT CDS complement(82127..82708) FT /transl_table=11 FT /locus_tag="DIP1449" FT /product="Putative regulatory protein" FT /note="Similar to Mycobacterium smegmatis regulatory FT protein RecX SW:RECX_MYCSM (P94965) (188 aa) fasta scores: FT E(): 5.5e-13, 38.85% id in 157 aa, and to Streptomyces FT coelicolor regulatory protein RecX or SC4H8.09 FT SW:RECX_STRCO (O50488) (188 aa) fasta scores: E(): 9.9e-11, FT 34.21% id in 152 aa" FT /db_xref="GOA:Q6NGQ9" FT /db_xref="InterPro:IPR003783" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGQ9" FT /protein_id="CAE49977.1" FT /translation="MQSEKIAQLKAALQNFSASNSDLFDYALEEEKAKVRKRALLLLDQ FT RARSVYELTNRLISADFDPNIVEYVVEDLVRANLLNDENFSREWVRQRRQRRGKSRQAL FT TRELRDKGIKSEIIADVVGDIQPEDEQDIARELAYKKVRSLKKEPCDYPEYQKVLRRTV FT GVLARRGFSQSMALEIAREAIDARIDEIRR" FT misc_feature complement(82154..82540) FT /note="HMMPfam hit to PF02631, RecX family" FT CDS complement(82746..83864) FT /transl_table=11 FT /gene="recA" FT /locus_tag="DIP1450" FT /product="Recombinase A" FT /note="Similar to Corynebacterium pseudotuberculosis FT recombinase A RecA protein SW:RECA_CORPS (P48288) (369 aa) FT fasta scores: E(): 2.5e-123, 94.07% id in 371 aa, and to FT Corynebacterium glutamicum recombinase A RecA protein FT SW:RECA_CORGL (P42442) (376 aa) fasta scores: E(): FT 7.2e-118, 89.78% id in 372 aa" FT /db_xref="GOA:P62213" FT /db_xref="InterPro:IPR001553" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR013765" FT /db_xref="InterPro:IPR020584" FT /db_xref="InterPro:IPR020587" FT /db_xref="InterPro:IPR020588" FT /db_xref="UniProtKB/Swiss-Prot:P62213" FT /protein_id="CAE49978.1" FT /translation="MAPRKNSKTQQPTGDNRKKALDAALAMIEKDFGKGAVMRLGDENR FT PPISAISSGNTAIDVALGIGGFPRGRIVEVYGPESSGKTTVALHAIAQAQKAGGIAAFI FT DAEHALDPDYARKLGVDTDALLVSQPDTGEQALEIADMLVRSGAIDIIVIDSVAALTPK FT AEIEGEMGDSHVGLQARLMSQALRKMTGALYNSGTTAIFINQLREKIGVMFGSPETTTG FT GKALKFYASVRCDVRRIQTLKDGQDAIGNRTRLKVVKNKVSPPFKIAEFDIMYGEGISR FT ESSIIDLGVDNGIIKKSGSWFTYEGDQLGQGKEKVRLYLKETPELADEIEDKIFRALHI FT GKYAALKDADDALTDDPVDMVPNVDFDDSDDD" FT misc_feature complement(82749..82823) FT /note="ProfileScan hit to PS50312, Aspartic acid-rich FT region." FT misc_feature complement(82845..83810) FT /note="HMMPfam hit to PF00154, recA bacterial DNA FT recombination protein" FT misc_feature complement(82887..82940) FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature complement(83013..83102) FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature complement(83013..83234) FT /note="ProfileScan hit to PS50163, RecA family profile 2." FT misc_feature complement(83115..83201) FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature complement(83145..83660) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(83166..83192) FT /note="ScanRegExp hit to PS00321, recA signature." FT misc_feature complement(83235..83726) FT /note="ProfileScan hit to PS50162, RecA family profile 1." FT misc_feature complement(83247..83336) FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature complement(83361..83450) FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature complement(83463..83552) FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature complement(83556..83645) FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature complement(83613..83636) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(83655..83723) FT /note="FPrintScan hit to PR00142, RecA protein signature" FT CDS complement(84120..84311) FT /transl_table=11 FT /locus_tag="DIP1451" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0986 TR:Q9CCC1 (EMBL:AL583920) (67 aa) fasta scores: E(): FT 7e-06, 39.68% id in 63 aa, and to Mycobacterium FT tuberculosis CDC1551 conserved hypothetical protein MT2808 FT TR:AAK47129 (EMBL:AE007109) (68 aa) fasta scores: E(): FT 4.1e-05, 34.92% id in 63 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGQ7" FT /protein_id="CAE49979.1" FT /translation="MRLTAFYQKLEEEFGQMKGAWIVHSHVLSRTGKTVEDSIEHEIDL FT RQVWFDLCDDFKIPEQRR" FT CDS 84398..84982 FT /transl_table=11 FT /locus_tag="DIP1452" FT /product="Putative membrane protein" FT /note="Similar to Streptococcus pyogenes putative biotin FT synthase SPY0207 TR:Q9A1L4 (EMBL:AE006489) (179 aa) fasta FT scores: E(): 2e-15, 37.57% id in 173 aa, and to Rhizobium FT meliloti hypothetical transmembrane protein SMC00964 FT TR:CAC45460 (EMBL:AL591785) (187 aa) fasta scores: E(): FT 2.7e-14, 37.43% id in 179 aa" FT /db_xref="InterPro:IPR003784" FT /db_xref="UniProtKB/TrEMBL:Q6NGQ6" FT /protein_id="CAE49980.1" FT /translation="MSTSYSSQRKLLDLAYIAVFAALIIVFAFVSIPAGNAGVPIVMQN FT AVIVLAGLILGARRGFLATALFLTLGLIGLPVLAGGRSVLAALPGPTVGYLVGYLVSVL FT VAGVVAYNAPKQPKPLAFVSFLVAALLALVTQYAFGTLGLMLRAGMDFNKALLVNVPFI FT GPDVIKMVVAVFIAIGVHAAFPDLRTSSKMK" FT misc_feature 84398..84505 FT /note="Signal peptide predicted for DIP1452 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.539 between residues 36 and 37" FT misc_feature order(84431..84499,84509..84568,84587..84655,84668..84736, FT 84755..84823,84881..84949) FT /note="6 probable transmembrane helices predicted for FT DIP1452 by TMHMM2.0" FT misc_feature 84464..84949 FT /note="HMMPfam hit to PF02632, BioY family" FT CDS 85046..85738 FT /transl_table=11 FT /locus_tag="DIP1453" FT /product="Putative ABC transport system, ATP-binding FT protein" FT /note="Similar to Deinococcus radiodurans ABC transporter, FT ATP-binding protein DR2469 TR:Q9RRL9 (EMBL:AE002076) (226 FT aa) fasta scores: E(): 2.1e-33, 46.84% id in 222 aa, and to FT Rhizobium meliloti putative ATP-binding ABC transporter FT protein SMC00962 TR:CAC45462 (EMBL:AL591785) (226 aa) fasta FT scores: E(): 5e-27, 40.36% id in 218 aa" FT /db_xref="GOA:Q6NGQ5" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q6NGQ5" FT /protein_id="CAE49981.1" FT /translation="MPTISFQDVTVCFDDKCILNNISLTLSEQRIGIIGANGSGKSSLV FT RLINGLGQPSSGTVTVDDMCVAKDGKNIRRVVGFVFSDAENQIVMPTVKDDIAFSLRRL FT KLSKTEREQRVNDMLVRFNLEDHAEQSPHLLSGGQKQLLALAAVLVIQPNVIIADEPTT FT LLDMRNRERIRKEFAQLQQQLIVVTHDLDFLADFDRVICINDGAIVADGTPSKVIHHYK FT ALMKANPL" FT misc_feature 85124..85666 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 85127..85663 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 85133..85198 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 85148..85171 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 85448..85492 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 85448..85654 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 85735..86349 FT /transl_table=11 FT /locus_tag="DIP1454" FT /product="Putative membrane protein" FT /note="Similar to Deinococcus radiodurans conserved FT hypothetical protein DR2468 TR:Q9RRM0 (EMBL:AE002076) (198 FT aa) fasta scores: E(): 7.8e-15, 36.18% id in 199 aa, and to FT Rhizobium meliloti hypothetical transmembrane protein FT SMC00963 TR:CAC45461 (EMBL:AL591785) (201 aa) fasta scores: FT E(): 2.5e-07, 29.38% id in 194 aa" FT /db_xref="GOA:Q6NGQ4" FT /db_xref="InterPro:IPR003339" FT /db_xref="UniProtKB/TrEMBL:Q6NGQ4" FT /protein_id="CAE49982.1" FT /translation="MMQSIPLGTYVPGESVVHKTPPLVKLGILIVFIVVSTIWGTTPLR FT ALSSCVVAVSLYFVAKIPLPVAWSQLWLPLPVLLTLGAFQWWQRGAFYSSSLVLTIYAG FT LMAAVLVTLTSTLASMMDALETALQPLKKYGFPVESVVLAFSLTLRLLPLMLNTVNEVL FT DARKARGVAFSLTALGTPVMIRSINRARSIADALMARGAGD" FT misc_feature 85771..86343 FT /note="HMMPfam hit to PF02361, Cobalt transport protein" FT misc_feature order(85792..85860,85879..85947,86005..86073) FT /note="3 probable transmembrane helices predicted for FT DIP1454 by TMHMM2.0" FT misc_feature 86194..86223 FT /note="ScanRegExp hit to PS00659, Glycosyl hydrolases FT family 5 signature." FT stem_loop 86353..86392 FT /note="Score 54: 18/18 (100%) matches, 0 gaps" FT CDS complement(86405..87244) FT /transl_table=11 FT /locus_tag="DIP1455" FT /product="Conserved hypothetical protein" FT /note="Similar in its full length to Mycobacterium FT tuberculosis 35 kDa protein Rv2744c or MT2815 or MTV002.09c FT SW:35KD_MYCTU (P31511) (270 aa) fasta scores: E(): 1.2e-51, FT 75.8% id in 248 aa, N-terminal region to Mycobacterium FT leprae B2235_C2_187 MLCB33.06c TR:Q49840 (EMBL:U00019) (167 FT aa) fasta scores: E(): 2.9e-27, 72.1% id in 147 aa, and FT C-terminal region to Mycobacterium leprae B2235_C3_214 FT MLCB33.05c TR:Q49845 (EMBL:U00019) (114 aa) fasta scores: FT E(): 3.4e-12, 58.18% id in 110 aa" FT /db_xref="InterPro:IPR007157" FT /db_xref="UniProtKB/TrEMBL:Q6NGQ3" FT /protein_id="CAE49983.1" FT /translation="MANPFSKAWKYLMALFDSKIEENADPKVQIQQAIEDAQRQHQELS FT QQAAAVIGNQRQLEMQLNRRLAEIEKLQGNTRQAIQLADKARAEGNIQKATEYENAAEA FT FAAQLVTAEQGVEDTKQLHDQALQQADAAKKAVERNAMVLQQKVAERTKLLSQLEQAKM FT QEKVAESIQSMNSISNRDTPNLDQVREKIERRYANALGTAELAQNSVQGRMAEVEQAGI FT QLAGHSRLEQIRAEMSGGQLGAGNSATQQSIESAQQATPSAADDAVARKMRELRGEA" FT CDS complement(87375..87704) FT /transl_table=11 FT /locus_tag="DIP1456" FT /product="Putative DNA-binding protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT DNA-binding protein, putative MT2816 TR:AAK47136 FT (EMBL:AE007109) (112 aa) fasta scores: E(): 1.2e-09, 56.16% FT id in 73 aa, and to Streptomyces coelicolor hypothetical FT 13.6 kDa protein SC7C7.10 TR:O86815 (EMBL:AL031031) (126 FT aa) fasta scores: E(): 1.1e-08, 49.39% id in 83 aa" FT /db_xref="GOA:Q6NGQ2" FT /db_xref="HSSP:1B0N" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:Q6NGQ2" FT /protein_id="CAE49984.1" FT /translation="MMKYTAVLDKPVTGNETTGSLPEPLLREALGAALRAFRADKGITL FT RELAETSRVSPGYLSELERGRKEVSSELLASVCHALGTSVSDVLIEAAGTMAMRSAEAD FT LVRVS" FT misc_feature complement(87441..87605) FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT misc_feature complement(87441..87608) FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature complement(87513..87578) FT /note="Predicted helix-turn-helix motif with score 1339 FT (+3.75 SD) at aa 43-64, sequence ITLRELAETSRVSPGYLSELER" FT CDS complement(87793..88290) FT /transl_table=11 FT /locus_tag="DIP1457" FT /product="Putative competence-damage related protein" FT /note="Similar to Streptomyces coelicolor hypothetical 18.5 FT kDa protein Sc7C7.09 TR:O86814 (EMBL:AL031031) (181 aa) FT fasta scores: E(): 1.7e-13, 36.87% id in 160 aa, and to the FT C-terminal region of Streptococcus pneumoniae putative FT competence-damage protein CinA or Exp10 or SP1941 FT SW:CINA_STRPN (P54184) (418 aa) fasta scores: E(): 4.3e-15, FT 47.86% id in 117 aa" FT /db_xref="InterPro:IPR008136" FT /db_xref="UniProtKB/TrEMBL:Q6NGQ1" FT /protein_id="CAE49985.1" FT /translation="MVDKLKQQNCTISTCESLTAGLMAATIANLPGSSQVLRGGLITYA FT TDSKVSVAGVPGATVEEHGPVSWQCAEAMAIGAKRQFQSQWAVSLTGVAGPATQCGQPV FT GTVWIGVALPNGTVKSKLVADILCGPGQVVAGDRQTIRLAAVRAAAMWITDLLGLEYTN FT EN" FT misc_feature complement(87820..88290) FT /note="HMMPfam hit to PF02464, Competence-damaged protein" FT CDS complement(88319..88909) FT /transl_table=11 FT /locus_tag="DIP1458" FT /product="Putative phosphatidyltransferase" FT /note="Similar to Bacillus subtilis FT CDP-diacylglycerol--glycerol-3-phosphate FT 3-phosphatidyltransferase PgsA SW:PGSA_BACSU (P46322) (193 FT aa) fasta scores: E(): 1.6e-12, 40.55% id in 180 aa, and to FT Escherichia coli CDP-diacylglycerol--glycerol-3-phosphate FT 3-phosphatidyltransferase PgsA or B1912 or Z3000 or ECS2650 FT SW:PGSA_ECOLI (P06978) (181 aa) fasta scores: E(): 1.7e-10, FT 35.91% id in 181 aa" FT /db_xref="GOA:Q6NGQ0" FT /db_xref="InterPro:IPR000462" FT /db_xref="InterPro:IPR004570" FT /db_xref="UniProtKB/TrEMBL:Q6NGQ0" FT /protein_id="CAE49986.1" FT /translation="MSVKQERENTSEHSTPSNWNVPNVLTSLRIIVIPLFAWFVLQSDG FT HITRWLWWAFGTFVALMITDKLDGDIARAKNLVTNFGKIADPIADKALMITALVTLNII FT GLVPWWITIVIVVRELGITLWRFFELKKGNVVPASKGGKIKTTLQAFAVALYLLPLPDA FT VQPIQFFVMLCAVVVTVVTGVQYLIDAKKLKNA" FT misc_feature complement(88331..88747) FT /note="HMMPfam hit to PF01066, CDP-alcohol FT phosphatidyltransferase" FT misc_feature complement(order(88346..88411,88559..88624,88721..88771, FT 88787..88852)) FT /note="4 probable transmembrane helices predicted for FT DIP1458 by TMHMM2.0" FT misc_feature complement(88619..88744) FT /note="ProfileScan hit to PS50291, CDP-alcohol FT phosphatidyltransferases profile" FT misc_feature complement(88640..88708) FT /note="ScanRegExp hit to PS00379, CDP-alcohol FT phosphatidyltransferases signature." FT CDS 89005..89298 FT /transl_table=11 FT /locus_tag="DIP1459" FT /product="Conserved hypothetical protein" FT /note="Similar to Agrobacterium tumefaciens StrC58 FT AGR_C_4802p TR:AAK88371 (EMBL:AE008178) (97 aa) fasta FT scores: E(): 2.2e-05, 33.67% id in 98 aa, and to Rhizobium FT loti MSR4226 protein TR:Q98EI5 (EMBL:AP003003) (98 aa) FT fasta scores: E(): 6e-05, 32.63% id in 95 aa" FT /db_xref="InterPro:IPR005545" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/TrEMBL:Q6NGP9" FT /protein_id="CAE49987.1" FT /translation="MTIYAFLYEYDPSSPKIAEHRPRHREFCAELKNDGVLIGSGPFID FT GNGGALLVISLPESATIDDAQALMDKDPFYSEGAISKRTVHTWNPVLNVFGG" FT CDS complement(89381..90388) FT /transl_table=11 FT /locus_tag="DIP1460" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCM1.25c TR:Q9RD18 (EMBL:AL133422) (316 FT aa) fasta scores: E(): 3.1e-54, 48.93% id in 327 aa, and to FT Xylella fastidiosa export protein XF0406 TR:Q9PG96 FT (EMBL:AE003892) (319 aa) fasta scores: E(): 1.3e-39, 39.43% FT id in 317 aa" FT /db_xref="GOA:Q6NGP8" FT /db_xref="InterPro:IPR005496" FT /db_xref="UniProtKB/TrEMBL:Q6NGP8" FT /protein_id="CAE49988.1" FT /translation="MEVNGVTWVITIAVIAGFFVFDFFSHVRTPHEPTLKESALWSVFY FT VVLACAFGVFLWLTWGEPGNPHQHGIEFFTGYVTEKALSVDNLFVFALIMGAFKIPRQY FT QQKVLLIGIALALVFRLVFILLGAAVIQAWSDVFYLFGIFLLYTALKLIWDEVTDKPET FT DPSDMRIIKWLRKVVHVTPNYEKDHLYIHQKGKFALTPLFIALVAIGMIDLMFAFDSIP FT AIYGITQEPYVVFTTNAFALLGLRQMYFLLDGLLDRLVYLAYGLGLILAFIGAKLLLHA FT MHENKLPFVNGGEPIAVPEIATHWSLVVIVGILAITIVASIIKSKRDDTQGVVR" FT misc_feature complement(order(89420..89485,89546..89611,89633..89689, FT 89735..89800,89927..89977,89993..90058,90095..90160, FT 90206..90271,90308..90373)) FT /note="9 probable transmembrane helices predicted for FT DIP1460 by TMHMM2.0" FT RBS complement(90397..90403) FT CDS complement(90669..93722) FT /transl_table=11 FT /locus_tag="DIP1461" FT /product="Putative cell division protein" FT /note="Similar to Streptomyces coelicolor FtsK homolog FT SC7C7.05 TR:O86810 (EMBL:AL031031) (929 aa) fasta scores: FT E(): 2.1e-106, 50.17% id in 837 aa, and similar to FT C-terminal region of Escherichia coli cell division protein FT FtsK or B0890 SW:FTSK_ECOLI (P46889) (1329 aa) fasta FT scores: E(): 6.5e-34, 39.14% id in 700 aa" FT /db_xref="GOA:Q6NGP7" FT /db_xref="InterPro:IPR002543" FT /db_xref="InterPro:IPR018541" FT /db_xref="UniProtKB/TrEMBL:Q6NGP7" FT /protein_id="CAE49989.1" FT /translation="MTARSNSSSSGTSSNKRPRTSGSSPSSKSRRGSGSGPAGRSRKTT FT SAVSYPTNSARRASETSEERTGSAFRAVGSGLGTLVSATAHGVGSVTRAVARTLHREHD FT DEEFDAVDDAFSSEETVVTNRKRKPSRMTKTKKNLFDDDIEDQHDDFDEEAGLGRFTLA FT LSDESVDSIGLILIALAFIVGASVWFDIAGPIGAAIAAGVHFVIGAGALILPLALVAIA FT IALMLGKLPEPDHQPRLVLGTSVIAISMLGLIHLFAGDPADWQGRTHAGGIVGAYSGGM FT IARGFSVYLAIPLLVLVIIYGALRINNVTVKELFEAIQDTVQGLRDDSEDEDDPLYADA FT DAEIEARSRGEKLHRPQPRREKPRPAPERRRMSAPLVDDVDEDVVSRPLFDDPSTAQSQ FT KSSVETQRAARDVSETDEFPAVDEPTVVVPRKPSAPRMSLPQTPVTDVEAAADVVAAGR FT KAVQDAVKARESHNVGAALAPSTPAQPYEAPESHYAVPSTQLLIPGKEAKTHSEANDRM FT IEAISDVFAEFKVDAHVTGFSRGPTVTRYEVELGPGVKVSKITNLQSNLAYAVATDNVR FT LLTPIPGKSAVGIEVPNTDREMVRLGDVLNSESVHSDHDPMLIGLGKDIEGDFVAHSVQ FT KMPHLLVAGSTGSGKSAFVNSLLVSLLTRATPEDVRLILVDPKMVELTPYEGIPHLITP FT IITQPKKAAAALQWLVEEMEQRYMDMKSTRVRHIKDFNRKVKSGEIQAPLGSQREYHPY FT PYIVCVVDELADLMMTAPKEIEDSIVRITQKARAAGIHLVLATQRPSVDVVTGLIKTNV FT PSRLAFATSSLTDSRVILDQAGAEKLIGMGDGLFIPQGGRPQRIQGAFVTDEEIQAVVD FT AAKAQGEPNYTEGVTEDKAAEAKKDIDADIGNDLEDLLQAVELVVTAQLGSTSMLQRKL FT RIGFAKAGRLMDLMETRGIVGPSEGSKAREVLVKPEELETTLWMIKGAKPEDAPKEDDW FT QSADSGVSDASDPSHGERAAYNPSSNAF" FT misc_feature complement(91320..91925) FT /note="HMMPfam hit to PF01580, FtsK/SpoIIIE family" FT misc_feature complement(91770..91793) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(order(92811..92867,92949..93005,93051..93116, FT 93156..93206)) FT /note="4 probable transmembrane helices predicted for FT DIP1461 by TMHMM2.0" FT misc_feature complement(93537..93710) FT /note="ProfileScan hit to PS50324, Serine-rich region." FT CDS complement(93798..94463) FT /transl_table=11 FT /locus_tag="DIP1462" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 23.6 FT kDa protein SC4G6.14 TR:Q9S2U0 (EMBL:AL096884) (211 aa) FT fasta scores: E(): 1.4e-09, 31.86% id in 204 aa, and to FT Mycobacterium tuberculosis hypothetical 24.0 kDa protein FT Rv1929c or MTCY09F9.35 TR:P95285 (EMBL:Z84498) (214 aa) FT fasta scores: E(): 4.3e-07, 32.71% id in 217 aa" FT /db_xref="InterPro:IPR017517" FT /db_xref="InterPro:IPR017519" FT /db_xref="UniProtKB/TrEMBL:Q6NGP6" FT /protein_id="CAE49990.1" FT /translation="MNLATSERAQLATLLLEKGPNFPTLCGDWNTQELAAHLLIRESRP FT WIAAGMFLPGGSRIVADAMRKITQQPFEHVVAQWMKGPKWGYLGRYLDSVANRIEHFVH FT HEDVRRGETTVGQWQNLDLLPCNAKPRVLSERHSGELYDAMRWVAPLLLRRSACPVVIE FT PIGFPRLVVADAGVVSTRGDCVVHVRGDIGEVVLWILGRNQVDLFVDGPTHLLKKSSL" FT CDS complement(94549..96603) FT /transl_table=11 FT /locus_tag="DIP1463" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 77.6 kDa protein SW:YOR4_CORGL (P54122) (718 aa) fasta FT scores: E(): 1.9e-189, 79.21% id in 717 aa, and to FT Campylobacter jejuni hypothetical protein CJ1710c TR:Q9PLW8 FT (EMBL:AL139079) (664 aa) fasta scores: E(): 6.9e-65, 34.08% FT id in 625 aa" FT /db_xref="GOA:Q6NGP5" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR001587" FT /db_xref="InterPro:IPR011108" FT /db_xref="UniProtKB/TrEMBL:Q6NGP5" FT /protein_id="CAE49991.1" FT /translation="MTEPRSRARKVTRKAGPPEAAETPVFQAPDSTATAEPADSAVKNS FT EKAEKDSSAESSRNNRGRNAQRGGRNRRGNGSSNRSSQSKNNQSNNRGRRTPVKSMQGA FT DLTQRLPEPPKAPKNGLRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVD FT LILPDFGPIENKLDKVDALVITHGHEDHIGAIPWLLKLRPDMPILASKFTMALIAAKCR FT EHRQRPKLIEVNEKSDINRGPFNIRFWAVNHSIPDCLGVAIKTGAGLVIHTGDVKLDQT FT PPDGRPTDLPALSRFGDEGVDLLLCESTNATVPGFSGSEADVAPTLKRLISDAKQRVIL FT ASFASNVYRVQAAVDAAVAAGRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAK FT MAPHKVVLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVMN FT MLSQIGATVVTGRDAKVHTSGHGFAGELLFLYNAARPKNVMPVHGEWRHLRANKELAIS FT TGVEADRVVLAQNGVVVDLVDGRARVVGQMQVGHLYVDGVTMGDIDAEVLEERTSLGEG FT GLIAITAVIDSRTARLLERPTVQAKGFSEDAVAMMPEVTELVEKTMNDLAAEGENDPYR FT MVQQLRRRVSRFVEQKWRRKPMIMPTVIPTTSATIDIDDADVRASRESQ" FT misc_feature complement(94612..95607) FT /note="HMMPfam hit to PF02147, Uncharacterized protein FT family UPF0036" FT misc_feature complement(95092..95178) FT /note="ScanRegExp hit to PS01292, Uncharacterized protein FT family UPF0036 signature." FT misc_feature complement(95488..95544) FT /note="ScanRegExp hit to PS00595, Aminotransferases class-V FT pyridoxal-phosphate attachment site." FT misc_feature complement(95623..96219) FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily" FT CDS complement(96606..97511) FT /transl_table=11 FT /gene="dapA" FT /locus_tag="DIP1464" FT /product="dihydrodipicolinate synthase" FT /EC_number="4.2.1.52" FT /note="Similar to Corynebacterium glutamicum FT dihydrodipicolinate synthase DapA SW:DAPA_CORGL (P19808) FT (301 aa) fasta scores: E(): 2e-75, 70.09% id in 301 aa, and FT to Bacillus subtilis dihydrodipicolinate synthase DapA FT SW:DAPA_BACSU (Q04796) (290 aa) fasta scores: E(): 7.4e-41, FT 45.12% id in 277 aa" FT /db_xref="GOA:Q6NGP4" FT /db_xref="InterPro:IPR002220" FT /db_xref="InterPro:IPR005263" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020624" FT /db_xref="InterPro:IPR020625" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGP4" FT /protein_id="CAE49992.1" FT /translation="MSTGLTANNGIEEFGTIAVAMVTPFDANGALDIKAGQKLAAHLVS FT NGIDSLVLAGTTGESPTTSLEEKIDLLKAVKAEVGDSAKLIAGAGTNNTAASVEMARAS FT AEAGADALLVVTPYYSKPSQEGIYQHFRTVSEATDLPICAYDIPPRSVVPIAPDTLCRL FT AALPMIKAVKDAKGDITAATTLIAETGLAWYSGDDPLNLPWLSVGATGFISVIGHLAPQ FT LLREMYTNFNQGNLEKAREINAQLAPLVAAQARLGGVSLAKAGLRLQGIEVGDPRLPIV FT APSESEIEDLRRDMNKTGVL" FT misc_feature complement(96615..97475) FT /note="HMMPfam hit to PF00701, Dihydrodipicolinate FT synthetase family" FT misc_feature complement(96663..97457) FT /note="BlastProDom hit to PD001859, PD001859" FT misc_feature complement(96987..97079) FT /note="ScanRegExp hit to PS00666, Dihydrodipicolinate FT synthetase signature 2." FT misc_feature complement(97041..97094) FT /note="FPrintScan hit to PR00146, Dihydrodipicolinate FT synthase signature" FT misc_feature complement(97119..97169) FT /note="FPrintScan hit to PR00146, Dihydrodipicolinate FT synthase signature" FT misc_feature complement(97209..97265) FT /note="FPrintScan hit to PR00146, Dihydrodipicolinate FT synthase signature" FT misc_feature complement(97308..97373) FT /note="FPrintScan hit to PR00146, Dihydrodipicolinate FT synthase signature" FT misc_feature complement(97311..97364) FT /note="ScanRegExp hit to PS00665, Dihydrodipicolinate FT synthetase signature 1." FT CDS complement(97593..98351) FT /transl_table=11 FT /locus_tag="DIP1465" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 28.0 kDa protein in dapB-dapA intergenic region FT SW:YDAP_CORGL (P40111) (250 aa) fasta scores: E(): 4.1e-76, FT 73.01% id in 252 aa, and to Mycobacterium tuberculosis FT hypothetical 27.6 kDa protein Rv2754c or MT2824 or FT MTV002.19c SW:YR54_MYCTU (O33296) (250 aa) fasta scores: FT E(): 1.3e-60, 58.56% id in 251 aa" FT /db_xref="GOA:Q6NGP3" FT /db_xref="InterPro:IPR003669" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGP3" FT /protein_id="CAE49993.1" FT /translation="MAQQSLLDVQLVACSTFTTPSGVDWKVDSAATDSEALVEFAGRAC FT YETFDKPNPRTAANDAYIRHIMEVGHMALLEHPTATVYIRGLSRSATHELVRHRHFSFS FT QLSQRFVHSDETHVVIPPLIDNDPQLRELFLSTVDEVRFAYSELMTALDNKLADEPNAI FT LRRKQARQAARSILPNATESRIVVTGNFRAWRHFIGMRATEHADVEIRSLAVRCLEILK FT EKAPTVFSDFETSVLSDGSIMATSPYVTDY" FT misc_feature complement(97659..98315) FT /note="HMMPfam hit to PF02511, Thymidylate synthase FT complementing protein" FT CDS complement(98351..99097) FT /transl_table=11 FT /gene="dapB" FT /locus_tag="DIP1466" FT /product="dihydrodipicolinate reductase" FT /EC_number="1.3.1.26" FT /note="Similar to Corynebacterium glutamicum FT dihydrodipicolinate reductase DapB SW:DAPB_CORGL (P40110) FT (248 aa) fasta scores: E(): 5.6e-68, 73.38% id in 248 aa, FT and to Escherichia coli dihydrodipicolinate reductase DapB FT or B0031 SW:DAPB_ECOLI (P04036) (273 aa) fasta scores: E(): FT 2.3e-12, 28.67% id in 272 aa" FT /db_xref="GOA:Q6NGP2" FT /db_xref="InterPro:IPR000846" FT /db_xref="InterPro:IPR011770" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGP2" FT /protein_id="CAE49994.1" FT /translation="MAIKVGVLGAQGRVGQAIVAGVTAAYDLELVAEVDRGDSLDVLVQ FT SGAEVIVDFTTPDSVMDNLEFCISHGIHCVVGTTGFTPERLEIVKKWAEEKGNTGVLIA FT PNFAISAVLTMAFARQAARFFDSAEVVECHHPNKLDAPSGTAIHTAEGIAQARREAGMP FT TQPDATEQSLDGARGADVGGVKVHAVRMTGMVAHEEVIFGGPGQSLTIRQDSYDRTSFV FT PGVLVGVRNVAQHLGLTVGLEHYLDI" FT misc_feature complement(98585..99091) FT /note="HMMPfam hit to PF01113, Dihydrodipicolinate FT reductase" FT misc_feature complement(98588..99091) FT /note="BlastProDom hit to PD004105, PD004105" FT misc_feature complement(98660..98713) FT /note="ScanRegExp hit to PS01298, Dihydrodipicolinate FT reductase signature." FT stem_loop complement(99190..99257) FT /note="Score 60: 24/24 (100%) matches, 1 gaps" FT CDS complement(99277..101544) FT /transl_table=11 FT /gene="gpsI" FT /locus_tag="DIP1467" FT /product="guanosine pentaphosphate synthetase/ FT polyribonucleotide nucleotidyltransferase" FT /note="Similar to Mycobacterium tuberculosis guanosine FT pentaphosphate synthetase/ polyribonucleotide FT nucleotidyltransferase GpsI or Rv2783c or MTV002.48C FT TR:O33325 (EMBL:AL008967) (752 aa) fasta scores: E(): FT 1.6e-187, 71.52% id in 755 aa, and to Bacillus subtilis FT polyribonucleotide nucleotidyltransferase PnpA or ComR FT SW:PNP_BACSU (P50849) (704 aa) fasta scores: E(): 4.6e-74, FT 45.5% id in 723 aa, and to Corynebacterium glutamicum FT polyribonucleotide nucleotidyltransferase CGL1975 FT SWALL:Q8NP50 (EMBL:AP005280) (753 aa) fasta scores: E(): 0, FT 82.04% id in 752 aa" FT /db_xref="GOA:Q6NGP1" FT /db_xref="HSSP:1SRO" FT /db_xref="InterPro:IPR001247" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR004088" FT /db_xref="InterPro:IPR012162" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR014069" FT /db_xref="InterPro:IPR015847" FT /db_xref="InterPro:IPR015848" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018111" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGP1" FT /protein_id="CAE49995.1" FT /translation="MSTKPSNVVFNIDEEFGITEAIATIDNGDFGKRTIRFETGQLARQ FT ADGSVTTYLDDDTMLLATTTASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRP FT STEAILACRLIDRPLRPTFVKGLRNEVQVVITVLSVNPQDMYDVVAINGASAATQLSGL FT PVSGPVGGVRMALIADDAHPKGQWIAFPTHEQHEQALFELVVAGRIVSKKQGKKTVDDV FT AIMMVEAGATEQVVDRVKAGAPAPTESVVAEGLEAAKPFIEVLCRAQAGLAERAAKETQ FT EFPLFPPYTDVVYDAVEKKVSKKLRSLLTIKSKQDRDEATNAYMEEIEADLIAQLGSDD FT EAAASKAIRAAYNAVMKKIVRHMILTEHFRIDGRGVTDIRDLGVEVDLIPRAHGSSLFE FT RGETQILGVTTLDMLKMEQQIDSLTPATSKRYIHHYNFPPYSTGETGRVGSPKRREIGH FT GALAERALVPVIPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVA FT GIAMGLVSDEVDGETRYVALTDILGAEDAFGDMDFKVAGTRQFITALQLDTKLDGIPSE FT VLAQALSQANDARNTILDTMAEVIETPDEMSDYAPRITAITVPVNKIGEVIGPKGKTIN FT SITEETGANISIEEDGTVYVSAASGAAAEAAIEKINAIANPQLPKVGERFLGTVVKTTA FT FGAFVSLLPGRDGLVHISKLGGGKRIEKVEDVVNVGDKLEVEILDIDNRGKISLAPVKN FT ED" FT misc_feature complement(99292..99501) FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature complement(99292..99507) FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature complement(99301..99513) FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature complement(99520..99717) FT /note="HMMSmart hit to SM00322, K homology RNA-binding FT domain" FT misc_feature complement(99535..99714) FT /note="ProfileScan hit to PS50084, Type-1 KH domain FT profile." FT misc_feature complement(99574..99702) FT /note="HMMPfam hit to PF00013, KH domain" FT misc_feature complement(99781..100437) FT /note="HMMPfam hit to PF01138, 3' exoribonuclease family" FT misc_feature complement(100819..101478) FT /note="HMMPfam hit to PF01138, 3' exoribonuclease family" FT CDS complement(101736..102005) FT /transl_table=11 FT /gene="rpsO" FT /locus_tag="DIP1468" FT /product="30S ribosomal protein S15" FT /note="Similar to Mycobacterium tuberculosis 30S ribosomal FT protein S15 RpsO or Rv2785c or MT2855 or MTV002.50c FT SW:RS15_MYCTU (O33327) (89 aa) fasta scores: E(): 4.2e-25, FT 75.28% id in 89 aa, and to Bacillus subtilis 30S ribosomal FT protein S15 RpsO SW:RS15_BACSU (P21473) (88 aa) fasta FT scores: E(): 6e-19, 56.81% id in 88 aa" FT /db_xref="GOA:Q6NGP0" FT /db_xref="InterPro:IPR000589" FT /db_xref="InterPro:IPR005290" FT /db_xref="InterPro:IPR009068" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGP0" FT /protein_id="CAE49996.1" FT /translation="MALSTEQKKSILAEYGLHETDTGSPEAQVALLSARINQLTEHLKF FT HKHDHHSRRGLLLLVGRRKGLLKYLADNNVDRYRDLIARLGLRR" FT misc_feature complement(101742..102002) FT /note="HMMPfam hit to PF00312, Ribosomal protein S15" FT misc_feature complement(101799..101891) FT /note="ScanRegExp hit to PS00362, Ribosomal protein S15 FT signature." FT CDS complement(102177..103136) FT /transl_table=11 FT /locus_tag="DIP1469" FT /product="Putative nucleoside hydrolase" FT /note="Similar to Rhizobium meliloti putative nucleoside FT hydrolase protein SMC01105 TR:CAC41852 (EMBL:AL591783) (314 FT aa) fasta scores: E(): 2.3e-28, 33.96% id in 315 aa, and to FT Crithidia fasciculata inosine-uridine preferring nucleoside FT hydrolase IunH SW:IUNH_CRIFA (Q27546) (314 aa) fasta FT scores: E(): 4.6e-26, 33.33% id in 315 aa" FT /db_xref="GOA:Q6NGN9" FT /db_xref="InterPro:IPR001910" FT /db_xref="UniProtKB/TrEMBL:Q6NGN9" FT /protein_id="CAE49997.1" FT /translation="MKKIILDLDTGIDDALALAYTLGSPELDLIGVTATYGNVLVETGV FT RNDLALLELFGRSDVPVFSGEPHALTKDGFEVLEISAFIHGKNGIGEAEVAEPVGVVQE FT LSAVDFLIESVERYGDELIIVPTGAMTNIAAAMKKSETFARDAQIVFMGGALTVPGNVS FT QWAEANVNQDPEAADIMVRNAGDITMVGLDVTLQTLLTYAETATWRALGTPAGNFLADA FT TDYYIKAYDTTAPHLGGCGLHDPLAVGVAIDPSLVTLLPINLKVDTEGPTRGRTIGDEV FT RLNDPHKNCKVAVGVDVDRFLKEFMERITRVAQGSNAR" FT misc_feature complement(102198..103136) FT /note="HMMPfam hit to PF01156, Inosine-uridine preferring FT nucleoside hydrolase" FT misc_feature complement(102210..103127) FT /note="BlastProDom hit to PD007736, PD007736" FT CDS complement(103174..104145) FT /transl_table=11 FT /gene="ribF" FT /locus_tag="DIP1470" FT /product="riboflavin biosynthesis protein" FT /EC_number="2.7.1.26" FT /note="Similar to Corynebacterium ammoniagenes riboflavin FT biosynthesis protein RibF [includes: riboflavin kinase (EC FT 2.7.1.26); FMN adenylyltransferase (EC 2.7.7.2)] FT SW:RIBF_CORAM (Q59263) (338 aa) fasta scores: E(): 9.6e-66, FT 54.23% id in 319 aa, and to Escherichia coli riboflavin FT biosynthesis protein RibF [includes: riboflavin kinase (EC FT 2.7.1.26); FMN adenylyltransferase (EC 2.7.7.2)] or B0025 FT or Z0029 or ECS0028 SW:RIBF_ECOLI (P08391) (313 aa) fasta FT scores: E(): 5.3e-19, 30.86% id in 311 aa" FT /db_xref="GOA:Q6NGN8" FT /db_xref="InterPro:IPR002606" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015864" FT /db_xref="InterPro:IPR015865" FT /db_xref="UniProtKB/TrEMBL:Q6NGN8" FT /protein_id="CAE49998.1" FT /translation="MDQVDIWHRLEDIPADLKASVITIGVFDGVHRGHRTLVAAATDRA FT QALGVPSVLVTFNPHPLSVLRPDKMPPLLGTVNQRADLAESLGVDHMFAMNFTAELSHL FT SPEEFFCSVIKDKLNAQAIVVGKNFTFGYKAAGTTDTLKALGEKYGVEIYVLDLLTENG FT DVVSSTAIRSDLLEGDIRRANWGLGREFSVHGDVVRGAGRGGKELGFPTANLYFPDSIA FT LPEDGVYAGWLTVTSSAPIDGDMVRGVRYPAAISVGHNPTFGDKRRSVESFVLDRHADL FT YGHSIVVEFVDRIRPMVKFDGIDELLVAIENDVTQTRAILHI" FT misc_feature complement(103180..103590) FT /note="HMMPfam hit to PF01687, Riboflavin kinase / FAD FT synthetase" FT misc_feature complement(103192..103575) FT /note="BlastProDom hit to PD003662, PD003662" FT CDS 104168..105070 FT /transl_table=11 FT /gene="truB" FT /locus_tag="DIP1471" FT /product="tRNA pseudouridine synthase B" FT /EC_number="4.2.1.70" FT /note="Similar to Mycobacterium tuberculosis tRNA FT pseudouridine synthase B TruB or Rv2793c or MT2862.1 or FT MTV002.58c SW:TRUB_MYCTU (O33335) (298 aa) fasta scores: FT E(): 1.1e-54, 52.39% id in 292 aa, and to Escherichia coli FT tRNA pseudouridine synthase B TruB or P35 or B3166 or Z4527 FT or ECS4047 SW:TRUB_ECOLI (P09171) (314 aa) fasta scores: FT E(): 5e-27, 37.75% id in 249 aa" FT /db_xref="GOA:P60343" FT /db_xref="InterPro:IPR002501" FT /db_xref="InterPro:IPR014780" FT /db_xref="InterPro:IPR015225" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/Swiss-Prot:P60343" FT /protein_id="CAE49999.1" FT /translation="MNDALADSGLVIVDKPQGMTSHDVVSKIRRTFSTKKVGHAGTLDP FT MATGVLVLGLERGTKFLAHMVASTKSYTATIRLGAATTTDDREGETITSASPDQLAGIT FT ETKISDAVKQFRGSIMQRPAAVSAIKIDGKRAHQRVREGEKVEIPARPVTISRYDILEI FT RRDAAFIDIDVEVDCSSGTYIRSLARDLGEELGVGGHLTALRRTQVGPFTLDNAVTLEK FT LEENPHVSLTLDQALAASYPVLSVSEKEASDLAMGKWLTPRGLKGIHAAVDPHGRAIAL FT VKEQGKRLATIFVARPSTL" FT misc_feature 104243..104719 FT /note="HMMPfam hit to PF01509, TruB family pseudouridylate FT synthase (N terminal domain)" FT CDS complement(105067..105759) FT /transl_table=11 FT /locus_tag="DIP1472" FT /product="Putative transferase" FT /note="Similar to Streptomyces coelicolor hypothetical 24.5 FT kDa protein Sc5A7.23 TR:O88029 (EMBL:AL031107) (226 aa) FT fasta scores: E(): 6.2e-26, 45.77% id in 201 aa, and to FT Streptomyces verticillus phosphopantetheinyl transferase FT PptA TR:Q9F0Q6 (EMBL:AF210311) (246 aa) fasta scores: E(): FT 1.6e-24, 44.04% id in 193 aa" FT /db_xref="GOA:Q6NGN7" FT /db_xref="InterPro:IPR003542" FT /db_xref="InterPro:IPR008278" FT /db_xref="UniProtKB/TrEMBL:Q6NGN7" FT /protein_id="CAE50000.1" FT /translation="MIAGNNSEYALDSRLFPQSARSTALLVPRHTPDLSNFNRLHVLEK FT AQVKNAVAVRRAEFGDARWCAHQSLRKLGLYDHPAILRGERGMPLWPVGIAGSLTHTEG FT LRAAVVAPTTEVASMGIDAEIAEELPGGILGSIARPNEIAMLDDLRARGLLFADRLLFC FT AKEATYKAWFPITQRWLDFDQAEIDIRADGTFISYLLIRPTPFPFIEGKWAIHDGYVVA FT TTVIPAMG" FT misc_feature complement(105232..105282) FT /note="FPrintScan hit to PR01399, Enterobactin synthetase FT component D signature" FT misc_feature complement(105541..105603) FT /note="FPrintScan hit to PR01399, Enterobactin synthetase FT component D signature" FT CDS complement(105756..106562) FT /transl_table=11 FT /locus_tag="DIP1473" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 37.6 kDa protein Rv2795c or MTV002.60c TR:O33337 FT (EMBL:AL008967) (324 aa) fasta scores: E(): 1e-22, 46.79% FT id in 265 aa, and to Streptomyces coelicolor hypothetical FT 33.5 kDa protein SC5A7.22 TR:O88028 (EMBL:AL031107) (295 FT aa) fasta scores: E(): 1.1e-17, 41.63% id in 257 aa" FT /db_xref="GOA:Q6NGN6" FT /db_xref="InterPro:IPR004843" FT /db_xref="UniProtKB/TrEMBL:Q6NGN6" FT /protein_id="CAE50001.1" FT /translation="MVQTLWAVADLHAAVRANGGRIDTIQPHDPSDWLIVAGDVAERTS FT VVIDVLHELRQRFATVIWVPGNHELFCRSSDRFQGRAKYDELVRRCRQIDVLTPEDPYP FT VFHGVTVVPLFTLYDYSFRPEGLTIEAALQSAHDKQLVLTDQFAIAPFVDIRAWCWDRL FT AYSVHRLSRERGPKILINHWPLVQEPVSELPIPEIGLWCGTRHTRSWPVRYSAITVVYG FT HLHVPNERIIDGVRHVEVSLGYPHQWSQNIEDRSWPFPVMTSEVVA" FT misc_feature complement(105873..106556) FT /note="ProfileScan hit to PS50185, Metallo-phosphoesterase FT motif." FT CDS complement(106609..107928) FT /transl_table=11 FT /locus_tag="DIP1474" FT /product="Putative DNA-damage inducible protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 44.8 kDa protein DinF or Rv2836c or MTCY16B7.06 TR:P71616 FT (EMBL:Z81331) (439 aa) fasta scores: E(): 1e-72, 50.59% id FT in 423 aa, and to Rhizobium loti DNA-damage-inducible FT protein MLR5680 TR:Q98B90 (EMBL:AP003007) (471 aa) fasta FT scores: E(): 1.9e-19, 30.07% id in 429 aa" FT /db_xref="GOA:Q6NGN5" FT /db_xref="InterPro:IPR002528" FT /db_xref="UniProtKB/TrEMBL:Q6NGN5" FT /protein_id="CAE50002.1" FT /translation="MNTSLNDTADRSAHITAVTVLALALPSLGVLAATPLYLLLDTAVV FT GGLGTVALAALGAGTVIYSQVTTQLTFLSYGTTARSARLYGAGKQGEAVYEGVQATWIA FT LLVGAVLATILFFGAPTFAWWLTGNREVANNAGHWLRITAFGVPLILAIMAGNGWLRGI FT QNTRAPLVFTLAGVIPGACAVPFFVHWWGLVGSAWANLMGTSITAVLFVGCLARYHRGS FT WRPQWRIMKTQLVLGRDLILRSFSFQVSFLSAAAVAGRFGAESLAAHQVLMQLWGFLTL FT VLDSLAIAGQTLTGAALGAGSAAVARAVGEKSIRYSTFFGVVLAAVFAVGWSVIPQVFT FT RDTNVLNVMAGPWWQLVALIALGGVVFALDGILLGASDAAFLRTVSIASVVCGFLPGVW FT LALIFDAGLVGVWWGLIAFLCIRLGTCWWRFRSMKWAGVS" FT misc_feature complement(order(106639..106704,106717..106782, FT 106804..106869,106915..106980,107002..107067, FT 107143..107208,107272..107337,107353..107418, FT 107440..107505,107551..107616,107731..107796, FT 107827..107892)) FT /note="12 probable transmembrane helices predicted for FT DIP1474 by TMHMM2.0" FT misc_feature complement(106732..107211) FT /note="HMMPfam hit to PF01554, Uncharacterized membrane FT protein family UPF0013" FT misc_feature complement(107371..107856) FT /note="HMMPfam hit to PF01554, Uncharacterized membrane FT protein family UPF0013" FT misc_feature complement(107833..107928) FT /note="Signal peptide predicted for DIP1474 by SignalP 2.0 FT HMM (Signal peptide probability 0.848) with cleavage site FT probability 0.526 between residues 32 and 33" FT CDS complement(107925..108818) FT /transl_table=11 FT /locus_tag="DIP1475" FT /product="Conserved hypothetical protein" FT /note="Similar to, although shorter in its N-terminal FT region than, Mycobacterium tuberculosis hypothetical 35.4 FT kDa protein Rv2837c or MTCY16B7.05 TR:P71615 (EMBL:Z81331) FT (336 aa) fasta scores: E(): 8.5e-29, 34.84% id in 287 aa, FT and to Clostridium acetobutylicum exopolyphosphatase family FT protein CAC1804 TR:AAK79769 (EMBL:AE007689) (321 aa) fasta FT scores: E(): 1.9e-19, 33.19% id in 235 aa" FT /db_xref="GOA:Q6NGN4" FT /db_xref="InterPro:IPR001667" FT /db_xref="InterPro:IPR003156" FT /db_xref="UniProtKB/TrEMBL:Q6NGN4" FT /protein_id="CAE50003.1" FT /translation="MCALVLVLQQAGCHAQGFIGQDAPIGVSFMWLPGAHAINLATELP FT PCDLIITVDCAALSRLGALQKSIVEAKQPVIVLDHHATNQGFGDINLVDAQAESASSIV FT YDLCQALGVEITPDIAQCLYAGLVADTGGFRWGRPRIHDLAQTLVEHGADIQQINHNLF FT DAYSLDDMRLIGQVLAALRTEQSTHKSTRSNANIVIACVHHWMIEGHSRDAVESIADYV FT RGLYGVDLAVVLKEYSPETWTISLRSDSWDVVAVARKCGGGGHVHAAGMTLHGTEQEII FT GSIMAAVAAAAETAKL" FT misc_feature complement(107940..108137) FT /note="HMMPfam hit to PF02272, DHHA1 domain" FT misc_feature complement(108420..108803) FT /note="HMMPfam hit to PF01368, DHH family" FT CDS complement(108906..109349) FT /transl_table=11 FT /gene="rbfA" FT /locus_tag="DIP1476" FT /product="Putative ribosome-binding factor A" FT /note="Similar to Mycobacterium leprae probable FT ribosome-binding factor A RbfA or ML1555 or MLCB596.15 FT SW:RBFA_MYCLE (Q9Z5I8) (164 aa) fasta scores: E(): 4.9e-26, FT 59.57% id in 141 aa, and to Escherichia coli FT ribosome-binding factor A RbfA or P15b or B3167 or Z4528 or FT ECS4048 SW:RBFA_ECOLI (P09170) (132 aa) fasta scores: E(): FT 3.1e-05, 31.4% id in 121 aa" FT /db_xref="GOA:Q6NGN3" FT /db_xref="InterPro:IPR000238" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR020053" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGN3" FT /protein_id="CAE50004.1" FT /translation="MVDHARAARLAKRIQTIVATAIEREVKDRRLEYVTVTDTRVTGDL FT HDATVYYTVRGRTIDDQPDLKAAAEALQRARGQLRKIVGDQLSVRFTPTLSFELDTVPE FT TSAHMEDLLARARARDLELAELKKNAQPAGDAHPYKDDDAMND" FT misc_feature complement(109011..109334) FT /note="HMMPfam hit to PF02033, Ribosome-binding factor A" FT misc_feature complement(109023..109334) FT /note="BlastProDom hit to PD007327, PD007327" FT misc_feature complement(109050..109115) FT /note="ScanRegExp hit to PS01319, Ribosome-binding factor A FT signature." FT CDS complement(109489..112350) FT /transl_table=11 FT /gene="infB" FT /locus_tag="DIP1477" FT /product="translation initiation factor IF-2" FT /note="Similar to Mycobacterium tuberculosis translation FT initiation factor IF-2 InfB or Rv2839c or MT2905 or FT MTCY16b7.03 SW:IF2_MYCTU (P71613) (900 aa) fasta scores: FT E(): 3e-103, 66.49% id in 958 aa, and to Escherichia coli FT translation initiation factor IF-2 InfB or SsyG or B3168 or FT Z4529 or ECS4049 SW:IF2_ECOLI (P02995) (890 aa) fasta FT scores: E(): 5.7e-47, 46.43% id in 702 aa. Note: Contains FT various regions in the N-terminal domain which appear to FT have high content in alanine and proline amino acid FT residues" FT /db_xref="GOA:Q6NGN2" FT /db_xref="InterPro:IPR000178" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006847" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR015760" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGN2" FT /protein_id="CAE50005.1" FT /translation="MPGKLRVHELAKQLGVTSKELLATLKDQGEFVKTASSTIEPPVVK FT KMKKHYESLGVTTEAPAASQEPKAKKPAAPKPAAPKPAATPQQAAKPAAPKPAAPKPAA FT EKKPAPKPAAKPVPKPGFSAAKAESSAPKPAAPKPAAPKPAAQSSTTATPGSMPRPQAK FT PAPKPGGRAPRVANNPFSSGPRPAPRPGGGNRSGNAPRPGGGPRPGGNRPQGGQGGPAE FT RAPRPGGRGGQPRPQGGSRSQQSGGQERQGGGRRPSPAMMPTHPNPGQMPSRSNGSRNG FT RGGAGGQGGRPGFGGGRPGGGGSAGGRGGRRGGTAGAFGRPGGAPRKGRKSKRQKRNEY FT EAMQAPNVIGGVRLPDGGGATIRLARGASLSDFAEKINADAAALVQALFNLGEMVTATA FT SVNEETLQLLGEEMNYKVEVVSPEDEDRELLESFDLQFGEDEGTEEDLAKRPPVVTVMG FT HVDHGKTRLLDTIRKTNVGSDEAGGITQGIGAYQVTVNIDDLSRKITFLDTPGHEAFTA FT MRARGAKSTDIAVLVVAADDGVMPQTVEAINHAKAADVPIVVAVNKIDKPGASPDKIRG FT QLTEYGLVPEEYGGDTMFVDISAKQNINIDGLLEAVLLTADASLDLRANPDMDAQGVAI FT EAHLDRGRGPVATVIVQRGTLRVGDSVVAGDAYGRVRRMVDEYGNDVEEAGPSRPVQMQ FT GLNGVPGAGDNLLVVEDDRVARQIANQRNARKRNALAAKTRKRVSLEDLDSVLKETSTL FT NLILKGDNAGSVEALEDALLKIEVDDEVQLNIIDRGVGAVTQTNVSLAAASDAVIIAFN FT VRAEGKATEEANAEGVDIRYYTVIYRALEEVEQALKGMLKPIYEEREIGRAEIRAIFKA FT SAVGLIAGCMVESGKVRRNASIRLLRDGTVVADNAKIESLRREKDDATEVAAGYECGMV FT LSYPDIQVGDIIEVFEQVEVPRT" FT misc_feature complement(109504..109800) FT /note="BlastProDom hit to PD186100, PD186100" FT misc_feature complement(109522..109755) FT /note="HMMPfam hit to PF03144," FT misc_feature complement(110230..110457) FT /note="HMMPfam hit to PF03144," FT misc_feature complement(110491..111006) FT /note="HMMPfam hit to PF00009, Elongation factor Tu family" FT misc_feature complement(110494..110991) FT /note="HMMSmart hit to SM00173, Ras subfamily of RAS small FT GTPases" FT misc_feature complement(110503..110571) FT /note="FPrintScan hit to PR00449, Transforming protein P21 FT ras signature" FT misc_feature complement(110653..110682) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(110653..110694) FT /note="FPrintScan hit to PR00449, Transforming protein P21 FT ras signature" FT misc_feature complement(110755..110790) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(110800..110868) FT /note="FPrintScan hit to PR00449, Transforming protein P21 FT ras signature" FT misc_feature complement(110806..110838) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(110953..110994) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(110956..110979) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(111364..111780) FT /note="ProfileScan hit to PS50315, Glycine-rich region." FT misc_feature complement(111643..112152) FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature complement(111856..111933) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT repeat_region complement(111913..111954) FT misc_feature complement(111913..112173) FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature complement(111934..111987) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(112024..112074) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT repeat_region complement(112039..112080) FT misc_feature complement(112084..112149) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT repeat_region complement(112099..112140) FT CDS complement(112461..112793) FT /transl_table=11 FT /locus_tag="DIP1478" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2906 TR:AAK47232 FT (EMBL:AE007115) (99 aa) fasta scores: E(): 1.3e-06, 43.67% FT id in 87 aa, and to Rhizobium meliloti hypothetical protein FT SMC02913 TR:CAC41675 (EMBL:AL591783) (230 aa) fasta scores: FT E(): 0.00061, 32.14% id in 112 aa" FT /db_xref="InterPro:IPR007393" FT /db_xref="UniProtKB/TrEMBL:Q6NGN1" FT /protein_id="CAE50006.1" FT /translation="MPSDSNQRSQQRIRTCIARRRPLPEASLLRVVALKGPDESAAVRV FT IPDPQRKMGGRGAWISPTLEALELAEKRRAFNRALRVSAVVDTGHVREYLAGLTARPNI FT VRKTEH" FT CDS complement(113049..114047) FT /transl_table=11 FT /locus_tag="DIP1479" FT /product="Putative N utilization related protein" FT /note="Similar to Bacillus subtilis N utilization substance FT protein A homolog NusA SW:NUSA_BACSU (P32727) (371 aa) FT fasta scores: E(): 7e-42, 42.69% id in 349 aa, and to FT Escherichia coli N utilization substance protein A NusA or FT B3169 or Z4530 or ECS4050 SW:NUSA_ECOLI (P03003) (495 aa) FT fasta scores: E(): 2.9e-30, 33.92% id in 280 aa" FT /db_xref="GOA:Q6NGN0" FT /db_xref="HSSP:1K0R" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR004088" FT /db_xref="InterPro:IPR009019" FT /db_xref="InterPro:IPR010213" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013735" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:Q6NGN0" FT /protein_id="CAE50007.1" FT /translation="MNIDVQALKAIEADRNIAVDELLETIARALLFAYQEYKDTNTVEN FT SRARVDINSVTGHVSVIVSELDEDGVVTTEYDDTPENFGRVGAQAVRDAIVRRLREAET FT LKAYDAYSEYEGRVVSGIVQADIFANEKGIVVIHLGTEVDGQDGILIPAEQIPGESFKH FT GDRVKAYVVGINRTPRDLQINLSRTHPELVRRLFELEVPEVADGSVEIIGIAREAGHRS FT KVAVKATVKGLNAKGACIGPRGQRVNNIMNELGGEKIDIIDFDDDPAKFVGNALAPSKV FT VHVEITDAEAQTAQVTVPDYQLSLAIGKEGQNARLAARLTGWKIDIRSDAS" FT misc_feature complement(113052..113165) FT /note="HMMPfam hit to PF00013, KH domain" FT misc_feature complement(113052..113177) FT /note="ProfileScan hit to PS50084, Type-1 KH domain FT profile." FT misc_feature complement(113139..113396) FT /note="HMMSmart hit to SM00322, K homology RNA-binding FT domain" FT misc_feature complement(113178..113369) FT /note="HMMPfam hit to PF00013, KH domain" FT misc_feature complement(113484..113702) FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT CDS complement(114044..114598) FT /transl_table=11 FT /locus_tag="DIP1480" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 19.8 FT kDa protein SC5H4.27 TR:Q9KYR2 (EMBL:AL355913) (177 aa) FT fasta scores: E(): 3.9e-12, 36.02% id in 161 aa, and to FT Mycobacterium tuberculosis hypothetical 19.5 kDa protein FT Rv2842c or MT2908 or MTCY24A1.15 SW:YS42_MYCTU (O05817) FT (183 aa) fasta scores: E(): 2.6e-11, 32.04% id in 181 aa" FT /db_xref="GOA:Q6NGM9" FT /db_xref="InterPro:IPR003728" FT /db_xref="InterPro:IPR020790" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGM9" FT /protein_id="CAE50008.1" FT /translation="MAFPTVEVLTELVTPVVAQHNMDLEGIRINKAGKKSLVAVSVDSD FT FRPDLDQLELVSNQISEVFDAGEAAGELSFGAGYTLEVGTPGLDQPLASARRWRRNRHR FT LVALEVEGKKSVERIGALNDDETAVIVVKRRGKKLVVRSVQLAENTQAVVEIEFAKPAE FT DELALTALEFDQALDRGEENK" FT misc_feature complement(114137..114565) FT /note="HMMPfam hit to PF02576, Uncharacterized BCR, YhbC FT family COG0779" FT CDS 114650..115558 FT /transl_table=11 FT /locus_tag="DIP1481" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGM8" FT /protein_id="CAE50009.1" FT /translation="MREVIFLQRSTTSAISAICLLGCVVACDISPSPDPNATLIDLAAI FT AHNDAAVLQSKNSALAQQRHADSEELISEIQRLCGTNSEGKLPESCSNEIVQGAVDKQA FT VSLKETVTESDAATRSAQAIVSAIDSAPSESLGLLGQQLVDLVRAGAAAPQSGIAQLNP FT RNEINKGTSKDDLIHDRESLKKALDWEYSAIYGLGVALAHSPAGTRTAVSDAITAHRDR FT VELLESSFAESFPNETIPRPEAAYEFSGYPEPHDAQSSRAFFDSLEADSAAWWLHALSE FT SHSATWRALCASLAAQSAARR" FT misc_feature 114650..114793 FT /note="Signal peptide predicted for DIP1481 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.232 between residues 48 and 49" FT CDS complement(115637..117394) FT /transl_table=11 FT /gene="proS" FT /locus_tag="DIP1482" FT /product="prolyl-tRNA synthetase" FT /EC_number="6.1.1.15" FT /note="Similar to Mycobacterium tuberculosis prolyl-tRNA FT synthetase ProS or Rv2845c or MT2911 or MTCY24A1.12 FT SW:SYP_MYCTU (O05814) (582 aa) fasta scores: E(): 5.2e-143, FT 65% id in 583 aa, and to Escherichia coli prolyl-tRNA FT synthetase ProS or DrpA or B0194 scores: E(): 6.5e-42, FT 40.44% id in 586 aa" FT /db_xref="GOA:Q6NGM7" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002316" FT /db_xref="InterPro:IPR004154" FT /db_xref="InterPro:IPR004500" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR007214" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGM7" FT /protein_id="CAE50010.1" FT /translation="MITRLSTLFLRTLREDPADAEVPSHKLLVRAGYIRRTAPGVYTWL FT PLGLRTLRKVETVVREEMDAIGAQELLFPALLPREPYEQTHRWTEYGDSLFRLKDRKGG FT DYLLGPTHEEMFASAVKDMYSSYKDFPVTLYQIQTKYRDEERPRAGILRGREFVMKDSY FT SFDMSDAGLEDSYQRHREAYQRILDRLGVEYVICAATSGAMGGSASEEFLAVSDNGEDT FT FVRATEGPYAANVEAVVTQPGVERPLEQAPEAVEYETPNAETIEALVQWAQSAGVTVED FT RSVAAADTLKCLLVKITQPGAEEAELAGILLPGDREVDMKRLEASVEPAEVELASEEDF FT KNNPFLVKGYVGPRALNAHGVKVLADPRVVSGTSWIAGADAVEHHVVGLTMGRDFTVDG FT YIEAAEIREGDPAPEGQGTLTLARGIEVGHIFQLGRKYTEAFDVQILDESGKRAIPTMG FT SYGIGVSRLMAVLAEQRHDETGLNWPLEVAPYQVHVVVANKDKEAIEAGDALVAALDSH FT GIEVLFDDRPKVSPGVKFKDAELLGMPFVVVLGRAFKDGNIELRERGQETVLVSADEIV FT DTVVAKLNR" FT misc_feature complement(115649..115942) FT /note="HMMPfam hit to PF03129," FT misc_feature complement(116813..117277) FT /note="HMMPfam hit to PF00587, tRNA synthetase class II (G, FT H, P, S and T)" FT misc_feature complement(116912..116974) FT /note="ScanRegExp hit to PS00179, Aminoacyl-transfer RNA FT synthetases class-II signature 1." FT misc_feature complement(116924..116959) FT /note="FPrintScan hit to PR01046, Prolyl-tRNA synthetase FT signature" FT misc_feature complement(116963..116989) FT /note="FPrintScan hit to PR01046, Prolyl-tRNA synthetase FT signature" FT misc_feature complement(117044..117079) FT /note="FPrintScan hit to PR01046, Prolyl-tRNA synthetase FT signature" FT misc_feature complement(117131..117187) FT /note="FPrintScan hit to PR01046, Prolyl-tRNA synthetase FT signature" FT CDS 117426..118172 FT /transl_table=11 FT /locus_tag="DIP1483" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 27.2 FT kDa protein SCC30.05 TR:Q9L016 (EMBL:AL352972) (260 aa) FT fasta scores: E(): 4.2e-19, 34.61% id in 260 aa, and to FT Neisseria meningitidis hypothetical protein NMA1114 FT TR:Q9JUV9 (EMBL:AL162755) (259 aa) fasta scores: E(): FT 6.9e-08, 27.23% id in 235 aa" FT /db_xref="InterPro:IPR005583" FT /db_xref="UniProtKB/TrEMBL:Q6NGM6" FT /protein_id="CAE50011.1" FT /translation="MLIVLPPSETKAVGGKNPAIDFDSLHFPTLNPIRKEIAHDLARLD FT ISQAQEILKLSQKLLPEAQRNIELFQSPTMPAVLRYTGVLYDALDATSLPSSTWEHLAI FT GSALFGVVMANDNIPHYRLSGTTKLPCADASVPTLKRRWGNAISTALSDTNEVILDLRS FT GTYQQLGKVKHAITVRVESEDSDGKRSVISHFNKHYKGQLARALLLHDVTPDPDHAIED FT LIGMTQECGFAVEHSKPHELTVVITQ" FT CDS complement(118192..119001) FT /transl_table=11 FT /locus_tag="DIP1484" FT /product="Putative uroporphyrinogen III methyltransferase" FT /note="Similar to Propionibacterium freudenreichii FT shermanii uroporphyrinogen III methyltransferase CobA FT TR:Q51720 (EMBL:U13043) (257 aa) fasta scores: E(): FT 1.6e-37, 47.05% id in 238 aa, and to Bacillus megaterium FT uroporphyrinogen III methylase CysGA TR:O87699 FT (EMBL:AJ000758) (243 aa) fasta scores: E(): 4.5e-32, 44.58% FT id in 240 aa" FT /db_xref="GOA:Q6NGM5" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR006366" FT /db_xref="InterPro:IPR014776" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:Q6NGM5" FT /protein_id="CAE50012.1" FT /translation="MKKFTEISSRNRKLFKLAGMFSSSESWTASVSLIGGGPGAWDLIT FT VRGMHRLQQADVILADHLGPASELAQLCDVSTKDIIDVSKLPYGKQVAQSKINELLIEH FT AQAGKKVARLKGGDPYIFGRGFEELQACAKHGIACEVVPGVTSAVSVPALAGIPITQRG FT VVHSFTVISGHVPPQHPQSLNDWEALARTGGTLSVIMGVKNAGAIAQALIDAGRGADTP FT VAVVQEGSTENQKSFKTTLAQLGQAMKDNDIKPPAVYVIGEVAGLQA" FT misc_feature complement(118267..118914) FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT misc_feature complement(118918..119001) FT /note="Signal peptide predicted for DIP1484 by SignalP 2.0 FT HMM (Signal peptide probability 0.845) with cleavage site FT probability 0.341 between residues 28 and 29" FT CDS 119015..120361 FT /transl_table=11 FT /locus_tag="DIP1485" FT /product="Conserved hypothetical protein" FT /note="Similar to Bacillus halodurans BH3939 protein FT TR:Q9K5Z6 (EMBL:AP001520) (492 aa) fasta scores: E(): FT 6.3e-56, 41.8% id in 488 aa, and to Rhizobium meliloti FT hypothetical protein SMC00453 TR:CAC45554 (EMBL:AL591785) FT (490 aa) fasta scores: E(): 9.8e-55, 40.53% id in 491 aa" FT /db_xref="InterPro:IPR003846" FT /db_xref="UniProtKB/TrEMBL:Q6NGM4" FT /protein_id="CAE50013.1" FT /translation="MPLTFAHSFADAVPSLSVPWRAEQWPDPRIIVFNHELGQELGIDE FT ASLLSNITQQGHAQAYSGHQFGQFNPLLGDGRALVLGDCAQTNAPHGQFEISLKGSGPT FT PFARRGDGRATLGPMLREYLISEALHGLGIPTTRSLAVITTGTDVQRERLLPGAVVVRV FT AQNHLRVGSVQCAAMRDDDSLAALVRYALSSHEDGVSDAEAAGLLLRRVSTSQAKLVAQ FT WMRFGFVHGVMNTDNVTLSGQTIDFGPCAFIDSFHPQAVFSSIDSHGRYSFGRQPSIMG FT WNIARLAEALLPLMSIDEARNIVHEFPDMYRRSWLDEMADAVGISPDDDHAAGVLDDLV FT ALLDVHRPDYAQFMRSLSDGTTVSLFPWAQQWEAEVSSLRVAAPRNPVYVPRNYLVEDA FT LEHAMNADMSVFSLLVEAGKNPYLREKRFEKLENPAPETWQDYVTYCGT" FT misc_feature 119015..120280 FT /note="HMMPfam hit to PF02696, Uncharacterized ACR, FT YdiU/UPF0061 family" FT CDS complement(120365..121489) FT /transl_table=11 FT /locus_tag="DIP1486" FT /product="Putative cobalamin synthesis related protein" FT /note="Similar to Staphylococcus aureus (strain N315) FT hypothetical protein SA0410 or SAV0450 TR:BAB56612 FT (EMBL:AP003130) (400 aa) fasta scores: E(): 4.2e-50, 48.16% FT id in 326 aa, and to Pseudomonas denitrificans CobW protein FT SW:COBW_PSEDE (P29937) (353 aa) fasta scores: E(): 1.1e-19, FT 29.22% id in 349 aa" FT /db_xref="InterPro:IPR003495" FT /db_xref="InterPro:IPR011629" FT /db_xref="UniProtKB/TrEMBL:Q6NGM3" FT /protein_id="CAE50014.1" FT /translation="MSHSTPVTVLSGFLGSGKTTLLNQMLSNRESKKIAVIVNDFSEIN FT IDAALIAGEGHLERGEDKFVELTNGCICCTLRDDLVQSVGALASSGDYDHIVIESTGIS FT EPMPVAATFEWVWDDGTRLADIAPIDTMATLVDASQFLTYMGKKTYLTDRDLGVTEDDE FT RTIADLLVDQVEFADKIYITKSDLVDDERYHATKALVRRMNPRASIDKLVNGRVITASG FT ENRNAINDLLGAMCYDEETARTYQGYVAELDNPHTPETEEYGISSFVFKGDRPFDRQRL FT IAALRSTRGIVRSKGHCWISDRIDMVQVWHQAGPDLRIAPAGYWQSAGITPSNEIVVIG FT VNFDHAQAQQLLNDAMLSDSEVQQLLSTADAAKS" FT misc_feature complement(120470..121384) FT /note="HMMPfam hit to PF02492, Cobalamin synthesis FT protein/P47K" FT misc_feature complement(121433..121456) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(121509..122018) FT /transl_table=11 FT /locus_tag="DIP1487" FT /product="Putative DNA repair related protein" FT /note="Similar to Escherichia coli FT methylated-DNA--protein-cysteine methyltransferase Ogt or FT B1335 SW:OGT_ECOLI (P09168) (171 aa) fasta scores: E(): FT 8.7e-12, 32.7% id in 159 aa, and to Salmonella typhimurium FT methylated-DNA--protein-cysteine methyltransferase Ogt or FT STM1659 or STY1405 SW:OGT_SALTY (P37429) (171 aa) fasta FT scores: E(): 1e-10, 31.44% id in 159 aa" FT /db_xref="GOA:Q6NGM2" FT /db_xref="InterPro:IPR001497" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR014048" FT /db_xref="UniProtKB/TrEMBL:Q6NGM2" FT /protein_id="CAE50015.1" FT /translation="MHAEYGFVSTPDGQFCVVTDSMTHKILASGWTENVSELVGLIHRD FT LRPLSMREAEVSLSIQNVISAYYDGRFARILTVPLLQQATDFRMSVWSALRRIPSGSPV FT SYATLARMSGHEGAVRAAASACANNPVALFVPCHRVIRSDGSYGGFRYGLAVKRSLLTR FT EVAHNK" FT misc_feature complement(121512..121769) FT /note="HMMPfam hit to PF01035, 6-O-methylguanine DNA FT methyltransferase, DNA binding domain" FT misc_feature complement(121596..121616) FT /note="ScanRegExp hit to PS00374, FT Methylated-DNA--protein-cysteine methyltransferase active FT site." FT CDS complement(122008..123315) FT /transl_table=11 FT /locus_tag="DIP1488" FT /product="Putative cobyrinic acid A,C-diamide synthase" FT /note="Similar to Mycobacterium tuberculosis cobyrinic acid FT A,C-diamide synthase CobB or Rv2848c or MT2914 or FT MTCY24A1.09 SW:COBB_MYCTU (O05811) (457 aa) fasta scores: FT E(): 1.1e-80, 54.54% id in 429 aa, and to Salmonella FT typhimurium cobyrinic acid A,C-diamide synthase CbiA FT SW:CBIA_SALTY (P29946) (459 aa) fasta scores: E(): 5.8e-30, FT 36.4% id in 445 aa" FT /db_xref="GOA:Q6NGM1" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR004484" FT /db_xref="InterPro:IPR011698" FT /db_xref="InterPro:IPR017929" FT /db_xref="UniProtKB/TrEMBL:Q6NGM1" FT /protein_id="CAE50016.1" FT /translation="MMAALSRKMRVAPFKVGPDYIDPGYHGMAAGHQGRNLDSVMCGID FT LIGPLYAHGSANADIAVVEGVMGLFDGRIAQGQNTADAQAQGSSAEIAATLGLPVVLVV FT DVRGMSQSVGAVVRGFATADPHVRIAGVILNKVGTDRHAEVCREAVEAVGVRVLGAIPR FT VDHAEVPSRHLGLITSVELDAAEDAVAAMATMVEEHVDLNALIELADCAYNGPAWDPAL FT AMGMSDAEALDNKPVIALAGGPAFSFTYAEHVEMLSAAGATVVAFDPLSEQLPQCDGLI FT IPGGFPEEHCDVLEQRADLKQQVCDVIAQGIPVHAECAGLLWLLSTLDGRPMLDVIPTH FT GAMGRRLTLGYRDAVVVHDSVIYRAGERVTGHEFHHTAIADSVVPGWDSAWGWRAWDGS FT PKVEGFVSGNVHASYLHVHPAAVPAAVRRFVEACAR" FT misc_feature complement(122662..123315) FT /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide FT synthase" FT misc_feature complement(122881..122931) FT /note="ScanRegExp hit to PS00237, G-protein coupled FT receptors family 1 signature." FT CDS complement(123381..124001) FT /transl_table=11 FT /locus_tag="DIP1489" FT /product="Putative cobalamin adenosyltransferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 Cob FT MT2915 TR:AAK47241 (EMBL:AE007116) (207 aa) fasta scores: FT E(): 5.1e-60, 68.9% id in 209 aa, and to Pseudomonas FT denitrificans CobO SW:COBO_PSEDE (P29930) (213 aa) fasta FT scores: E(): 5.8e-13, 41.75% id in 182 aa" FT /db_xref="GOA:Q6NGM0" FT /db_xref="InterPro:IPR003724" FT /db_xref="UniProtKB/TrEMBL:Q6NGM0" FT /protein_id="CAE50017.1" FT /translation="MPQGKLDPASVPDDGLTTRQRRLLPITAVHTGPGKGKSTAAFGMA FT LRAWNQGMSIGVFQFVKSAKWRVGEESVFKQLGQSHIDSGVGGPVEWHKMGEGWSWSKK FT RGSEEDHARDAREGWEEIKRRLASQTHDFYVLDEFTYPIAWGWIDVNDVVETLKNRPGT FT QHVVITGRNAAPELIDVADLVTEMTKIKHPMDVGRKGQKGIEW" FT misc_feature complement(123384..123950) FT /note="HMMPfam hit to PF02572, ATP:corrinoid FT adenosyltransferase BtuR/CobO/CobP" FT CDS complement(join(124125..124937,124894..125976)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1490" FT /product="Putative magnesium chelatase (pseudogene)" FT /note="Pseudogene. Similar in its full length to FT Streptomyces coelicolor putative chelatase SCI8.35 FT TR:Q9RJ18 (EMBL:AL132644) (672 aa) fasta scores: E(): FT 3.9e-87, 50.07% id in 669 aa, and to Chlorobium vibrioforme FT magnesium-chelatase 67 kDa subunit BchD SW:BCHD_CHLVI FT (O50313) (619 aa) fasta scores: E(): 8.1e-30, 31.9% id in FT 652 aa and N-terminal region similar to Rhodobacter FT capsulatus magnesium-chelatase 38 kDa subunit BchI FT SW:BCHI_RHOCA (P26239) (350 aa) fasta scores: E(): 6.7e-35, FT 45.79% id in 321 aa. Presents a frameshift at residue 361" FT /db_xref="PSEUDO:CAE50018.1" FT misc_feature complement(124128..124664) FT /note="ProfileScan hit to PS50234, VWFA domain profile." FT misc_feature complement(124134..124670) FT /note="HMMSmart hit to SM00327, von Willebrand factor (vWF) FT type A domain" FT misc_feature complement(124491..124508) FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT misc_feature complement(125056..125910) FT /note="HMMPfam hit to PF01078, Magnesium chelatase, subunit FT ChlI" FT misc_feature complement(125452..125883) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT CDS complement(126174..127673) FT /transl_table=11 FT /gene="mqo" FT /locus_tag="DIP1492" FT /product="malate:quinone oxidoreductase" FT /EC_number="1.1.99.16" FT /note="Similar to Corynebacterium glutamicum malate:quinone FT oxidoreductase Mqo SW:MQO_CORGL (O69282) (499 aa) fasta FT scores: E(): 1.5e-148, 72.28% id in 498 aa, and to FT Escherichia coli malate:quinone oxidoreductase Mqo or B2210 FT SW:MQO_ECOLI (P33940) (548 aa) fasta scores: E(): 9.2e-93, FT 50% id in 502 aa" FT /db_xref="GOA:Q6NGL9" FT /db_xref="InterPro:IPR006231" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGL9" FT /protein_id="CAE50019.1" FT /translation="MADSTTAQHVTDEVDVALIGAGIMSATLGAMLRTLEPGWTQVMFE FT RLDAPAQESSSPWNNAGTGHSALCELNYTPEVKGRVQIDKALGVNEKFQISRQFWSYQV FT NEGVLPSPREWINPVPHVSFGRGEDQVAYLKKRYEALAAHPLFPNMQYTDDRAKFAEML FT PLMADGRSEFEKVAISWTDAGTDINYGSQTRQFLKAAEKNGTEIRYGHEVKDIKRDGAK FT WRVTVKNVHTGDTQVIRANFVFVGAGGMALPLLQKTGIVEIRGWGGFPVSGQWLRCTNP FT DIIEQHAAKVYGKASIGAPPMSVPHLDTRVIDGEKGLLFGPYAGWTPKFLKKGSYLDLF FT KSIRPTNLMSYLGVGAQEFGLTKYLITEVMKDQAARMESLREYMPNAKDEDWELVTAGQ FT RVQAIQPVVGPRFSTLAFGTSLINSADGSVAGILGASPGASIAPAAMLELLERCFGQKM FT VEWGPTIKDMIPSYGIRLATDQKLFNEIWDHTQATLQLDKK" FT CDS 128050..129063 FT /transl_table=11 FT /locus_tag="DIP1493" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 38.2 kDa protein MT2921 TR:AAK47246 FT (EMBL:AE007116) (346 aa) fasta scores: E(): 5.6e-43, 40.95% FT id in 337 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGL8" FT /protein_id="CAE50020.1" FT /translation="MTASDYEWQPDILGKDFQQLVIPLGADPISEGGEDDIFATLVRYA FT PADQPTPTSRPAVLFVHGMTDYFFQRHVAQWFHQHGFSVYALDLRKCGRSHRNNQSWHY FT ISDISRYFEELDRAKSIIEELHPTIFPIGHSTGGLILAHWLDGLRQCETLHPTIPGAIL FT NSPWLDMMTPATVTRALRPILTRAARRFPHASFGRSKEGTYGRSLHASRSGEWDYDISF FT KPLTGHLRKLGWLHAIDTAQSLVHNDAVDCGIPLLMLCSDHSSLRGKFSPRAQVTDTVL FT DVEQMKRWAPHLSEYVSVCTIRGAVHDVYLSQKPARLQALETSVRWMNRILSEHTI" FT misc_feature 128215..128499 FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT CDS 129161..130552 FT /transl_table=11 FT /locus_tag="DIP1494" FT /product="Putative glutathione reductase" FT /note="Similar to Mycobacterium tuberculosis glutathione FT reductase homolog GorA or Rv2855 or MTCY24A1.02c TR:O07927 FT (EMBL:AF002193) (459 aa) fasta scores: E(): 4.1e-91, 56.18% FT id in 461 aa, and to Staphylococcus aureus mercuric FT reductase MerA SW:MERA_STAAU (P08663) (547 aa) fasta FT scores: E(): 4.7e-36, 30.17% id in 464 aa" FT /db_xref="GOA:Q6NGL7" FT /db_xref="InterPro:IPR000815" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="InterPro:IPR017817" FT /db_xref="UniProtKB/TrEMBL:Q6NGL7" FT /protein_id="CAE50021.1" FT /translation="MNNQQPRHYDLIIVGSGSGNSIPGPEFDDKSIAIVEKGKFGGTCL FT NVGCIPTKMFVYASEIAQVIVDSERFGISASIDSVQWPDIVERVFAHRIDPIAASGEEY FT RRGDKTPNIDVYDQHARFIAPKTLQIGDGENAPIISGDTIVIATGSRPFIPSYIEESKV FT TYYTNETIMRMPDLPRSMVVLGGGYIAMEFAHVFSALGVNVTVVNRSPQLLRVLDEDIS FT HRFTEITKTKMDCRLGRTVSSVDQDSNGVTLTLDDGSTATGEVLLVATGRIPNGDQMNL FT DSAGIDMDGKRIKVDDFGRTTADGVWALGDVSSPYQLKHVANAEMRAVKHNLLHPEDLK FT SMPHQHVPAGVFTHPQIATVGLTEQEARDAGYSITVKIQNYGDVAYGWAMEDTQHFAKL FT IADKKTGRLLGAHFIGPQASTLIQQLITVMAFDLDVREVATKQYWIHPALPELTENALL FT GLDFS" FT misc_feature 129188..129256 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 129188..130123 FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreductase" FT misc_feature 129281..129313 FT /note="ScanRegExp hit to PS00076, Pyridine FT nucleotide-disulphide oxidoreductases class-I active site." FT misc_feature 129317..129376 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 129590..129619 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 129593..129646 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 129698..129751 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 129698..129775 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 129758..129805 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 129950..129994 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 130076..130099 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 130187..130252 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 130199..130528 FT /note="HMMPfam hit to PF02852, Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation domain" FT misc_feature 130382..130429 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT stem_loop 130557..130606 FT /note="Score 66: 22/22 (100%) matches, 0 gaps" FT CDS complement(130610..132049) FT /transl_table=11 FT /gene="cobQ" FT /locus_tag="DIP1495" FT /product="Putative cobric acid synthase" FT /note="Similar to Streptomyces coelicolor cobyric acid FT synthase CobQ TR:Q9RJ20 (EMBL:AL132644) (502 aa) fasta FT scores: E(): 5.1e-87, 52.59% id in 481 aa, and to FT Salmonella typhimurium cobyric acid synthase CbiP or FT STM2019 SW:CBIP_SALTY (Q05597) (506 aa) fasta scores: E(): FT 5.9e-63, 40.35% id in 508 aa" FT /db_xref="GOA:Q6NGL6" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR004459" FT /db_xref="InterPro:IPR011698" FT /db_xref="InterPro:IPR017929" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGL6" FT /protein_id="CAE50022.1" FT /translation="MKSFLVAGCTSDAGKSVVVAGLCRALTRRGLRVAPFKAQNMSNNS FT AVTPDGGEIGRAQALQAYACGLTPSVDFNPILLKPGSDRTSQLVVRGIATGNVSARSYI FT EHRTELRKIASESLNSLRERFDVVVCEGAGSPAETNLRATDVANFGLAEECDLPVYIVG FT DIDRGGVLAHFYGTHQIVDDADRARIKGFVVNKFRGDVSILEPGLQDLEDRLGVPTVAV FT LPFIHGLWIDAEDSLQSTIGATVGPAAAPLGTQRLRVAAIRLPRVSNATDVEALACEPG FT VTVTWTVDPDSVAEADLVVIPGSKATLSDLAWLRSTGVADAIMERARSQRPILGICGGF FT QMMCSHIDDPVESGSTTPVEGLGIFDVDIEFHPEKTLIRHENGGYEVHHGRVERSTEQP FT WIGNEGARTQSNFGTHRHGYLEDDEARRDFLGTVSTLAQRPGFVVAPATSFEAERNKQL FT DVIADAIEQHWDLDQLIAALT" FT misc_feature complement(131348..132043) FT /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide FT synthase" FT CDS complement(132112..132996) FT /transl_table=11 FT /gene="mapB" FT /locus_tag="DIP1496" FT /product="methionine aminopeptidase" FT /EC_number="3.4.11.18" FT /note="Similar to Mycobacterium tuberculosis methionine FT aminopeptidase Map or Rv2861c or MT2929 or MTV003.07C FT SW:AMPM_MYCTU (O33343) (285 aa) fasta scores: E(): 6.5e-77, FT 70.21% id in 282 aa, and to Escherichia coli methionine FT aminopeptidase Map or B0168 or Z0178 or ECS0170 FT SW:AMPM_ECOLI (P07906) (264 aa) fasta scores: E(): 1.2e-42, FT 47.6% id in 250 aa" FT /db_xref="GOA:Q6NGL5" FT /db_xref="HSSP:1O0X" FT /db_xref="InterPro:IPR000994" FT /db_xref="InterPro:IPR001714" FT /db_xref="InterPro:IPR002467" FT /db_xref="UniProtKB/TrEMBL:Q6NGL5" FT /protein_id="CAE50023.1" FT /translation="MAITREPLKPGHPTPIREVPAYIDRPEYVWKDEVQEAIGEPFIQT FT PETIEAMREASKIAANALHVAGAAVAPGVTTDEIDRIAHEYMCDHGAYPSCLGYRGFTK FT SSCVSLNEIVCHGIPDTTVIQDGDIVNIDITAYKNGVHGDTNATFLAGNVSEEHRLLVE FT RTYEATMRGIRAAKPGREINVIGRVIESYAKRFGYSVVTDFTGHGIGTTFHNGLVVLHY FT DSDAYRDVLEPGMTLTIEPMINLGGLDYRIWEDGWTVQNTDFKFTAQFEHTLVITDDGN FT EILSIPDDDVKVF" FT misc_feature complement(132151..132873) FT /note="HMMPfam hit to PF00557, metallopeptidase family M24" FT misc_feature complement(132274..132312) FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT misc_feature complement(132331..132387) FT /note="ScanRegExp hit to PS00680, Methionine aminopeptidase FT subfamily 1 signature." FT misc_feature complement(132367..132405) FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT misc_feature complement(132565..132615) FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT misc_feature complement(132640..132681) FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT CDS complement(133043..134899) FT /transl_table=11 FT /locus_tag="DIP1497" FT /product="Putative secreted penicillin-binding protein" FT /note="Similar to Mycobacterium tuberculosis penecillin FT binding protein Rv2864c or MTV003.10c TR:O33346 FT (EMBL:AL008883) (603 aa) fasta scores: E(): 1.9e-81, 42.81% FT id in 612 aa, and to Staphylococcus aureus FT beta-lactam-inducible penicillin-binding protein Pbp FT SW:PBP_STAAU (P07944) (670 aa) fasta scores: E(): 2.3e-07, FT 21.04% id in 632 aa" FT /db_xref="GOA:Q6NGL4" FT /db_xref="InterPro:IPR001460" FT /db_xref="InterPro:IPR007887" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:Q6NGL4" FT /protein_id="CAE50024.1" FT /translation="MDIVSARLARRATGITLAVCLVGSSLTACTPKPKSAQPVAEEFFH FT NVAAQDFDAAAQLTDQDDSARELLSRSWEGLQAEGLDVSLNKVDAKDTVATAKYTLTWK FT LPKDRTLSYDTSMTLNRINDQWTIRWQPAAVHPKLAANQHLELRAINAERASVVSSDGA FT EVLVPGVQYRLIADTQHIIDKAATAQTIATHLRAARAADETVPELSASDIQQALETNRG FT SYSLAVVNERAGDSIKQALAGVSGIRLNKEAAMVNKDPNFAPDVIRRVSSLVNDQLAGA FT NGWSVDAVTQDGVSMQTIERHAPQVAPAIRISLNHNVQVAAERAVNLRKDKQSMLVAIR FT PSTGEILAIAQSDLADKQGDLALNGQYPPGSTFKIVTASAGIQDQGLNADSIVPCPGTM FT NIYGRTVTNYNGFSLGNVPLEKAFARSCNTTFANISEQLNKGQLKEIGRDFGIGIDYDI FT PGLNTLTGSIPQGDTELARTEAGYGQGEVLVSPFGMALVSATAAAGKTPTPTLVSGTTT FT KVSGTADGLKPETVEQLRRLMGAVTAPGGTAAGMRAGGKIFGKTGEAEINGGSHAWFTG FT YRDDIAFASLVVLGGGSEASVAVVDNFFTTLDDLNAGIAVSE" FT misc_feature complement(133094..133954) FT /note="HMMPfam hit to PF00905, Penicillin binding protein FT transpeptidase domain" FT misc_feature complement(133217..133240) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(133382..133405) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(134795..134899) FT /note="Signal peptide predicted for DIP1497 by SignalP 2.0 FT HMM (Signal peptide probability 0.990) with cleavage site FT probability 0.715 between residues 35 and 36" FT CDS complement(135016..136191) FT /transl_table=11 FT /gene="gcpE" FT /locus_tag="DIP1498" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis GcpE protein FT homolog or Rv2868c or MT2936 or MTV003.14c SW:GCPE_MYCTU FT (O33350) (387 aa) fasta scores: E(): 7.3e-117, 83.02% id in FT 377 aa, and to Escherichia coli GcpE protein or B2515 or FT Z3778 or ECS3377 SW:GCPE_ECOLI (P27433) (372 aa) fasta FT scores: E(): 1.1e-54, 45.96% id in 359 aa. Note: gcpE is an FT essential gene in E. coli" FT /db_xref="GOA:Q6NGL3" FT /db_xref="InterPro:IPR004588" FT /db_xref="InterPro:IPR011005" FT /db_xref="InterPro:IPR016425" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGL3" FT /protein_id="CAE50025.1" FT /translation="MSTPTGQPIGLGLPDAPLPVLAPRRKTRQLMVGNVGVGSDYPVSV FT QSMTTTKTHDVNATLQQIAQLTASGCDIVRVACPKTVDAEALPAIAKKSPIPVIADIHF FT QPKYIFSAIDAGCAAVRVNPGNIKEFDGRVKEVAKAAGDAGIPIRIGVNAGSLDKRIME FT KYGKATPEALVESALWEAGLFEDCGFGDIAISVKHNDPVIMVEAYRQLAAQSDYPLHLG FT VTEAGPAFQGTIKSSVAFGSLLSQGIGDTIRVSLSADPVEEIKVGDQILQSLNLRKRGL FT EIVSCPSCGRAQVDVYSLAEEVTAALDGMSIPLRVAVMGCVVNGPGEARDADLGVASGN FT GKGQIFVRGEVIKTVPESQIVETLIEEAVRLAEAEGLEIEEGAGPQVKITR" FT CDS complement(136297..137511) FT /transl_table=11 FT /locus_tag="DIP1499" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium leprae probable integral FT membrane protein ML1582 TR:Q9CBU4 (EMBL:AL583922) (404 aa) FT fasta scores: E(): 1.1e-60, 42.71% id in 405 aa" FT /db_xref="GOA:Q6NGL2" FT /db_xref="InterPro:IPR001478" FT /db_xref="InterPro:IPR008915" FT /db_xref="UniProtKB/TrEMBL:Q6NGL2" FT /protein_id="CAE50026.1" FT /translation="MASYLLGVVLFATGIAITIALHEWGHFMAARAFGMRVRRFFIGFG FT PTITSYRRGNTEYGFKAFPLGGFCDIAGMTNQDQVTPEEAPHAMMHKPWWQRIIVLLGG FT ILMNILVGFVTLYFVACVVGLPNLKVDTTPVVGEVACVPSKQLDATTLSPCEGQGPAAR FT AGIQTGDVIVAIDHKNVDSFAAVRSYVFDKPNQDLTFTIDRDGVRRDVVIRVQEVHRLS FT TNGDDLVAGAIGVSSAPLKNTVIQYNPVTAASGAAVFSAHMVGATVEGLAQFPAKLPGV FT AAAIVGGERDHNSPMSVVGASRVGGELIQHSYWSSFFMMLASLNFFLALFNLIPLPPLD FT GGHIAVVIYEKLRDAFRKRRGLQPAGPADYTKLMPLTFAVAGLLLAVGALVIVADVVNP FT IRLLG" FT misc_feature complement(order(136321..136386,136465..136530, FT 137152..137217,137434..137499)) FT /note="4 probable transmembrane helices predicted for FT DIP1499 by TMHMM2.0" FT misc_feature complement(136894..137166) FT /note="HMMSmart hit to SM00228, Domain present in PSD-95, FT Dlg, and ZO-1/2." FT misc_feature complement(137428..137457) FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT CDS complement(137556..138719) FT /transl_table=11 FT /gene="dxr" FT /locus_tag="DIP1500" FT /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase" FT /EC_number="1.1.1.-" FT /note="Similar to Mycobacterium tuberculosis FT 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr or FT Rv2870c or MT2938 or MTCY274.01c SW:DXR_MYCTU (Q10798) (413 FT aa) fasta scores: E(): 1.3e-78, 59.22% id in 385 aa, and to FT Bacillus subtilis 1-deoxy-D-xylulose 5-phosphate FT reductoisomerase Dxr SW:DXR_BACSU (O31753) (388 aa) fasta FT scores: E(): 1.9e-39, 40.17% id in 351 aa" FT /db_xref="GOA:Q6NGL1" FT /db_xref="InterPro:IPR003821" FT /db_xref="InterPro:IPR013512" FT /db_xref="InterPro:IPR013644" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGL1" FT /protein_id="CAE50027.1" FT /translation="MRKKILILGSTGSIGTQALEVIASRQDQFEVVGIAAGGRDPQLII FT QQAQMLGLAADHVAVANEKSATQVSRALGAAVLSGRDAATDLVESVPADTVLNGLVGSM FT GLRATLATIQLGEVLALANKESLVAGGTFVTSQAAPGQIVPVDSEHSAMAQCLRSGASA FT EVSKLVLTASGGPFRGWSREEMWDVTPEQAAAHPTWSMGQMNTLNSATLINKGLELIEA FT TLLFDIPADRIEVTVHPQSIVHSMVTFCDGATIAQASPPSMLLSISHALAWPHRVPEAQ FT PALDFSQASTWDFMPVDNEAFPAVELAREVALKQGTYPAVYNAANEQAAAAFLRGRIKF FT PQIVDIVGEVVAGSSQFAGVASSVEEIIAHESESRRRADALVDKLSR" FT misc_feature complement(137586..138707) FT /note="HMMPfam hit to PF02670, 1-deoxy-D-xylulose FT 5-phosphate reductoisomerase" FT misc_feature complement(138645..138719) FT /note="Signal peptide predicted for DIP1500 by SignalP 2.0 FT HMM (Signal peptide probability 0.966) with cleavage site FT probability 0.624 between residues 25 and 26" FT CDS 138957..139475 FT /transl_table=11 FT /locus_tag="DIP1501" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGL0" FT /protein_id="CAE50028.1" FT /translation="MHLLFLTHHCLRNNSLQPECAIGKVIDKENNVAGSHEIAPEIHNG FT VSTLDEPSAAWGWHSIGTRAIQLSGWGSVVFLLAYNFGNHKGHVETIFLFVFAAVIALG FT LILQIVKPQGKQVRTLTAHNQPVGFKEKDWNYLQATCTGPYAELSDSELRALNIEPERV FT RHLRTLPEA" FT misc_feature 139218..139286 FT /note="1 probable transmembrane helix predicted for DIP1501 FT by TMHMM2.0" FT CDS complement(139555..140661) FT /transl_table=11 FT /locus_tag="DIP1502" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 29.6 kDa protein Rv2880c/Rv2879c or MT2947 or FT MTCY274.11c/MTCY274.10C SW:YS80_MYCTU (Q10806) (364 aa) FT fasta scores: E(): 1.1e-95, 69.44% id in 360 aa, and to FT Escherichia coli hypothetical protein YfgB or B2517 FT SW:YFGB_ECOLI (P36979) (384 aa) fasta scores: E(): 3.5e-38, FT 38.96% id in 349 aa" FT /db_xref="GOA:Q6NGK9" FT /db_xref="InterPro:IPR004383" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGK9" FT /protein_id="CAE50029.1" FT /translation="MTNPTKPIPLNFDKPRRFMPPKHFADLSADERIDALKELGLPKFR FT ANQIARHYYGRLEADPSTMTDLPAAAREKVKDALFPQLMQPVRAVQADDGETQKTLWKL FT HDGTLLESVLMRYPNRATLCISSQAGCGMACPFCATGQGGLDRNLSTGEIVDQVRAASA FT TMQAEGGRLSNIVFMGMGEPLANYKRVVSAVRQITAPVPEGFGISQRNVTVSTVGLAPA FT IRKLADEDLSVTLAVSLHTPDDELRNTLVPTNNRWEVAEVLDAARYYADRSGRRVSIEY FT ALIRDVNDQGWRADMLGKKLHKALGPLVHVNLIPLNPTPGSKWDASPMDRQKEFVQRVI FT AQGVTCTVRDTRGQEIAAACGQLAAEER" FT CDS 140831..141214 FT /transl_table=11 FT /locus_tag="DIP1503" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3867 TR:AAK48231 FT (EMBL:AE007181) (117 aa) fasta scores: E(): 1.1e-09, 47.25% FT id in 91 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGK8" FT /protein_id="CAE50030.1" FT /translation="MPDTTNDYESRSDAFDTPHNHLPDVTQSEYSVPAEIPQTTKPEVK FT SSFAGGTWFALIVGALLLIVLLIFILQNQQAVELNFFTLQFTVPAGVGFLLAAIFGALI FT MAMVGVVRMFQLRRQIKNLQRSI" FT misc_feature order(140972..141040,141098..141166) FT /note="2 probable transmembrane helices predicted for FT DIP1503 by TMHMM2.0" FT CDS complement(141277..142155) FT /transl_table=11 FT /locus_tag="DIP1504" FT /product="Putative phospholipid biosynthesis" FT /note="Similar to Mycobacterium tuberculosis phosphatidate FT cytidylyltransferase CdsA or Rv2881c or MT2948 or FT MTCY274.12c SW:CDSA_MYCTU (Q10807) (306 aa) fasta scores: FT E(): 2.4e-51, 51.73% id in 288 aa, and to Escherichia coli FT phosphatidate cytidylyltransferase CdsA or Cds or B0175 or FT Z0186 or ECS0177 SW:CDSA_ECOLI (P06466) (249 aa) fasta FT scores: E(): 1.9e-14, 35.35% id in 198 aa" FT /db_xref="GOA:Q6NGK7" FT /db_xref="InterPro:IPR000374" FT /db_xref="UniProtKB/TrEMBL:Q6NGK7" FT /protein_id="CAE50031.1" FT /translation="MPHSSTAFEHLPKPKNSAGRNLKAAISVGIGLGALVLLAIFVIPF FT GWYPLVAIAIAVATWEVERRLIEAGYLLQRWVMLIGGQVMLWLSWPFGPKGLVAGFVGV FT VLATMFGRLFHHGRSMPPKNYLRDTAVAIFVLTWIPLFGSFAAMLSLFETETAPGKYFI FT VTFMLCVIASDVGGYIAGVMFGSHPMAPAVSPKKSWEGFIGSVVFGMIVGAFTVSYLLG FT HQWWWGLVLGFGLVICATLGDLVESQFKRELGIKDMSAILPGHGGLMDRLDGMLPSAMV FT TWLVLSVISSV" FT misc_feature complement(141286..142137) FT /note="HMMPfam hit to PF01148, Phosphatidate FT cytidylyltransferase" FT misc_feature complement(141337..141417) FT /note="ScanRegExp hit to PS01315, Phosphatidate FT cytidylyltransferase signature." FT misc_feature complement(order(141421..141477,141493..141558, FT 141604..141669,141703..141768,141814..141864, FT 141886..141942,141988..142080)) FT /note="7 probable transmembrane helices predicted for FT DIP1504 by TMHMM2.0" FT misc_feature complement(141994..142155) FT /note="Signal peptide predicted for DIP1504 by SignalP 2.0 FT HMM (Signal peptide probability 0.963) with cleavage site FT probability 0.471 between residues 54 and 55" FT CDS complement(142279..142836) FT /transl_table=11 FT /gene="frr" FT /locus_tag="DIP1505" FT /product="ribosome recycling factor" FT /note="Similar to Mycobacterium tuberculosis ribosome FT recycling factor Frr or Rv2882c or MT2949 or MTCY274.13c FT SW:RRF_MYCTU (Q10794) (185 aa) fasta scores: E(): 1e-37, FT 62.16% id in 185 aa, and to Bacillus subtilis ribosome FT recycling factor Frr SW:RRF_BACSU (P81101) (184 aa) fasta FT scores: E(): 4.2e-27, 45.6% id in 182 aa" FT /db_xref="GOA:P61303" FT /db_xref="InterPro:IPR002661" FT /db_xref="InterPro:IPR015998" FT /db_xref="UniProtKB/Swiss-Prot:P61303" FT /protein_id="CAE50032.1" FT /translation="MIDEILFEAEEHMNTSVERTRDELVNIRTGRANPAMFNGVIADYY FT GVPTPITQMATISVPEARMLLIKPYEMSMMNEIENAIRNSDLGVNPTNDGQVLRVTIPQ FT LTEERRRDMAKLAKSKGEDGKIAIRNVRRKGMDQLKKIQKDGDAGEDEVQAAEKELDKV FT TAKYVAQVDEVVAKKEAELMEV" FT misc_feature complement(142288..142782) FT /note="HMMPfam hit to PF01765, Ribosome recycling factor" FT CDS complement(142908..143717) FT /transl_table=11 FT /gene="pyrH" FT /locus_tag="DIP1506" FT /product="uridylate kinase" FT /EC_number="2.7.4.-" FT /note="Similar to Mycobacterium leprae uridylate kinase FT PyrH or ML1591 or MLCB250.75 SW:PYRH_MYCLE (O33045) (279 FT aa) fasta scores: E(): 1.5e-71, 73.86% id in 264 aa, and to FT Escherichia coli uridylate kinase PyrH or SmbA or B0171 or FT Z0182 or ECS0173 SW:PYRH_ECOLI (P29464) (240 aa) fasta FT scores: E(): 1e-34, 44.06% id in 236 aa" FT /db_xref="GOA:Q6NGK6" FT /db_xref="HSSP:1Z9D" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR011817" FT /db_xref="InterPro:IPR015963" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGK6" FT /protein_id="CAE50033.1" FT /translation="MRFSSWTKNTVTASNTMAERSERRHTMTEGVQNERTGYKRVMLKL FT GGEMFGGGAVGIDPDVVQNVARQIASVARTGAEIAVVIGGGNFFRGAQLQQRGLDRNRS FT DYMGMLGTVMNCLALQDFLEQEGIDCRVQTAINMAQVAEPYLPLRAKRHLEKGRVVIFG FT AGMGMPYFSTDTTAAQRALEIDCEVLLMAKAVDGVYDDDPRTNPDAQLFHQITPREVIE FT KGLKVADATAFSLCMDNKMPILVFNLLTEGNIARAVAGEQIGTLVQS" FT misc_feature complement(142977..143603) FT /note="HMMPfam hit to PF00696, Amino acid kinase family" FT CDS complement(143860..144687) FT /transl_table=11 FT /gene="tsf" FT /locus_tag="DIP1507" FT /product="elongation factor TS" FT /note="Similar to Mycobacterium tuberculosis elongation FT factor TS Tsf or Rv2889c or MT2957 or MTCY274.20c FT SW:EFTS_MYCTU (Q10788) (271 aa) fasta scores: E(): 8.6e-56, FT 63.86% id in 274 aa, and to Streptomyces coelicolor FT elongation factor TS Tsf or SC2E1.42 SW:EFTS_STRCO (O31213) FT (278 aa) fasta scores: E(): 1.7e-39, 48.92% id in 280 aa" FT /db_xref="GOA:P61332" FT /db_xref="InterPro:IPR000449" FT /db_xref="InterPro:IPR001816" FT /db_xref="InterPro:IPR009060" FT /db_xref="InterPro:IPR014039" FT /db_xref="InterPro:IPR018101" FT /db_xref="UniProtKB/Swiss-Prot:P61332" FT /protein_id="CAE50034.1" FT /translation="MANYTAADVKKLREITGSGMLDCKKALEETNGDFDKAVEVLRIKG FT AKDVGKRAERNATEGLIAVSGNTMVEINSETDFVAKNAEFKEFAQKVADAAAAVKANTP FT EELAAADLDGKTAADAIQELSAKIGEKLELRRAITLEGEKLSVYLHQRSADLPPAVGVL FT VAYTGEGEAAQAAAHAAAMQVAALKAQYLTREDVPAEVIEKERSIAEQITREEGKPEKA FT IPKIVEGRLNGFYKDVCLVEQASVADSKKTVKQVMDEAGVTLTGFARYEVGQH" FT misc_feature complement(143866..144519) FT /note="HMMPfam hit to PF00889, Elongation factor TS" FT misc_feature complement(144121..144450) FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature complement(144340..144363) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(144445..144477) FT /note="ScanRegExp hit to PS01127, Elongation factor Ts FT signature 2." FT misc_feature complement(144556..144678) FT /note="HMMPfam hit to PF00627, UBA domain" FT misc_feature complement(144607..144654) FT /note="ScanRegExp hit to PS01126, Elongation factor Ts FT signature 1." FT CDS complement(144968..145768) FT /transl_table=11 FT /gene="rpsB" FT /locus_tag="DIP1508" FT /product="30S ribosomal protein S2" FT /note="Similar to Mycobacterium tuberculosis 30S ribosomal FT protein S2 RpsB or Rv2890c or MT2958 or MTCY274.21c FT SW:RS2_MYCTU (Q10796) (287 aa) fasta scores: E(): 1.4e-68, FT 70.94% id in 265 aa, and to Escherichia coli 30S ribosomal FT protein S2 RpsB or B0169 or Z0180 or ECS0171 SW:RS2_ECOLI FT (P02351) (240 aa) fasta scores: E(): 2.8e-40, 50.22% id in FT 225 aa" FT /db_xref="GOA:Q6NGK5" FT /db_xref="InterPro:IPR001865" FT /db_xref="InterPro:IPR005706" FT /db_xref="InterPro:IPR018130" FT /db_xref="InterPro:IPR020589" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGK5" FT /protein_id="CAE50035.1" FT /translation="MAVVTMRELLDAGVHFGHQTRRWNPKMRRFIFTDRNGIYIIDLQQ FT TLTYIDEAYEFVKETVAHGGTILYVGTKKQAQESVKNEAERVGMPYVNHRWLGGMLTNF FT QTVSKRLHRMKELQAMDAAENGYEGRTKKEVLMLTRERTKLERVLGGIADMTKTPSAMW FT VVDTNKEHIAVSEAHKLNIPVVAILDTNCDPDVVNFPVPGNDDAIRSIDVLTKVISHAV FT IEGKKAREERALAAAKEAAGDANKTEVAAKVEATEEVAAEAEAK" FT misc_feature complement(145091..145744) FT /note="HMMPfam hit to PF00318, Ribosomal protein S2" FT misc_feature complement(145136..145180) FT /note="FPrintScan hit to PR00395, Ribosomal protein S2 FT signature" FT misc_feature complement(145208..145243) FT /note="FPrintScan hit to PR00395, Ribosomal protein S2 FT signature" FT misc_feature complement(145241..145294) FT /note="FPrintScan hit to PR00395, Ribosomal protein S2 FT signature" FT misc_feature complement(145457..145510) FT /note="FPrintScan hit to PR00395, Ribosomal protein S2 FT signature" FT misc_feature complement(145631..145660) FT /note="FPrintScan hit to PR00395, Ribosomal protein S2 FT signature" FT misc_feature complement(145697..145753) FT /note="FPrintScan hit to PR00395, Ribosomal protein S2 FT signature" FT misc_feature complement(145718..145753) FT /note="ScanRegExp hit to PS00962, Ribosomal protein S2 FT signature 1." FT CDS 146136..146669 FT /transl_table=11 FT /locus_tag="DIP1509" FT /product="Putative secreted protein" FT /note="Similar to the N-terminal region of Mycobacterium FT tuberculosis hypothetical 25.8 kDa protein Rv2891 precursor FT or MT2958.2 or MTCY274.22 SW:YS91_MYCTU (Q10812) (249 aa) FT fasta scores: E(): 2.1e-14, 39.05% id in 169 aa" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:Q6NGK4" FT /protein_id="CAE50036.1" FT /translation="MTTDMKKILTVISSFLLALFIAQPASTTPINPLTSTYINPATGDP FT SIARVIRPFDKPQHNWLKGHRGVDLDIPINGAVRAANSGIIAFAGKVAGKPVISIDHPD FT GLRTTYQPVTTALNTGDLVERGEIIGVLAPSVDGFPGLHWGVLQGKDNYLNPLSLLEPL FT HIRLKPPQMRVRSK" FT misc_feature 146370..146612 FT /note="HMMPfam hit to PF01551, Peptidase family M23/M37" FT CDS complement(146684..147592) FT /transl_table=11 FT /locus_tag="DIP1510" FT /product="Putative integrase/recombinase" FT /note="Similar to Mycobacterium tuberculosis probable FT integrase/recombinase XerC or Rv2894c or MTt2962 or FT MTCY274.25c SW:XERC_MYCTU (Q10815) (298 aa) fasta scores: FT E(): 9.1e-49, 50% id in 304 aa, and to Escherichia coli FT integrase/recombinase XerD or XprB or B2894 SW:XERD_ECOLI FT (P21891) (298 aa) fasta scores: E(): 2.6e-30, 36.48% id in FT 296 aa" FT /db_xref="GOA:Q6NGK3" FT /db_xref="HSSP:1A0P" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR011931" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q6NGK3" FT /protein_id="CAE50037.1" FT /translation="MPAQLTELVDDFCEYLDLGLGRSPATVRSYKSDLFGFVNRFATLD FT QFTLDNVREWLAQAVADGKSRATIARRTASIKAFSGWLLRNGYNDIDVAARLVAPKVQR FT TLPMVVSERTMTNIVEKPASTTEDTFVRDRAICELLYASGIRVSELCGLNTGDVDLKRQ FT TARVTGKGNKQRVVPFGDQATAALSHWLNGVRSEMLISAGCTSGVDALFVGVRGKRIDP FT RQVRRIVETSGQEHGIGGLAPHALRHTAATHLLDNGADLRVVQEMLGHSSLNTTQIYTH FT VSTQRLKEAYKNAHPRAQKNL" FT misc_feature complement(146726..147265) FT /note="HMMPfam hit to PF00589, Phage integrase family" FT misc_feature complement(147329..147574) FT /note="HMMPfam hit to PF02899, Phage integrase, N-terminal FT SAM-like domain" FT CDS complement(147859..149010) FT /transl_table=11 FT /locus_tag="DIP1511" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 40.1 kDa protein Rv2896c or MT2964 or MTCY274.27C FT SW:YS96_MYCTU (Q10817) (389 aa) fasta scores: E(): 3.5e-42, FT 42.21% id in 379 aa" FT /db_xref="GOA:Q6NGK2" FT /db_xref="InterPro:IPR003488" FT /db_xref="UniProtKB/TrEMBL:Q6NGK2" FT /protein_id="CAE50038.1" FT /translation="MSRLEAWAYLSRVFEGPSRSLQKLLETESDVEKIAWGIKKREAWL FT GPILFETASRYSVSLEQEDLTTIKNLGGRLVTPDDDEWPREKFETAFGFAASGTSSLVR FT SYQSDAVAPHALWVRGAPLSTTVDRSVAIVGTRAMSHYGKSATSMLAAGIADHHWTIVS FT GGALGVDTVAHTEALQRQKPTVAVCARGLDAPYPRKNAELLRSIVETGCLVSEYAPGLT FT PHRHRFLTRNRLVAALSQGTVVVEAAWRSGALNTLSWASALGRVAMAVPGPVTNTGSLG FT CHERIRNKEAELVCSAEEILALVGTLGEFDPNGQYELQFAADPIQSLSRNEMRVFDSLD FT ANPHTTDTVAAAAGIPIGLCVHILRDLEKKQLVMREGAHWHRC" FT misc_feature complement(148126..148812) FT /note="HMMPfam hit to PF02481, SMF family" FT misc_feature complement(148576..148599) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(149007..150557) FT /transl_table=11 FT /locus_tag="DIP1512" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 52.9 kDa protein Rv2897c or MT2965 or MTCY274.28C FT SW:YS97_MYCTU (Q10818) (503 aa) fasta scores: E(): 8.8e-58, FT 45.63% id in 515 aa, and to Haemophilus influenzae FT competence protein ComM or HI1117 SW:COMM_HAEIN (P45049) FT (509 aa) fasta scores: E(): 3.5e-49, 36.59% id in 511 aa" FT /db_xref="GOA:Q6NGK1" FT /db_xref="InterPro:IPR000523" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004482" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q6NGK1" FT /protein_id="CAE50039.1" FT /translation="MGLAKTRSAAISGVTGVIVDVEANIGAGLPGTYIVGLADAAVAEA FT RQRIKTAVNNSELPWPKTKVIVNLSPASLRKNGAQFDLGICMAIMAASGMHNPDCRDIE FT NTLFLGEIGLDGAIKPISGLVPALLAARGAEIRNVVIPWGNAAEAMAVIDDSAMNVLVA FT RSISEATEWLKGKDDLIAAHDVILDEHATKKQPHKVGDMQDVVGQSDAKKAAEIAVAGG FT HNIVMIGPPGSGKSMIAQRMAGLLPALTHTEMIEATAIHSVMGQAFNGPMTHPPFVAPH FT HSITKAALLGGGSGNLQPGAASLAHTGVLFLDEVSEIPANILDCLRMPLECGEIKLMRH FT RREVTFPARFQLVMATNPCRCAAELPSECRCSATTRARYLSNISGPLRDRLDIFVRTHA FT QGAVISDANQESSKSIAERVQSARERSEHRWRTAGFTVTTNAAMDPYHLRRHFPADEAS FT MALLSSYLGDGELSQRGVDRALKVAWTLCDLEGKTRPDLGHTAYALELRDDCIRENAA" FT misc_feature complement(149355..149897) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(149493..150503) FT /note="HMMPfam hit to PF01078, Magnesium chelatase, subunit FT ChlI" FT misc_feature complement(149850..149873) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(150544..151071) FT /transl_table=11 FT /locus_tag="DIP1513" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical FT protein SC2E1.19 SW:YE19_STRCO (O69890) (130 aa) fasta FT scores: E(): 2.6e-05, 32.54% id in 126 aa" FT /db_xref="GOA:Q6NGK0" FT /db_xref="InterPro:IPR003509" FT /db_xref="InterPro:IPR011335" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGK0" FT /protein_id="CAE50040.1" FT /translation="MDPACASVDNSKSDPLTDSYPQKYRYSFHRNCQRIMLGVNLKRKN FT SHYTKGATMTATHNHYLAVLGEDFVAQQYANEGYDITARNVSFSVGEIDIIATSPQGEV FT VFIEVKTRSSSLMDAAEAVTPTKMRKIHRAASKWLQGKPFADIRFDVVAVHVDEYGELD FT MTRYQGVEHGAC" FT misc_feature complement(150607..150879) FT /note="HMMPfam hit to PF02021, Uncharacterised protein FT family UPF0102" FT CDS complement(151143..151448) FT /transl_table=11 FT /locus_tag="DIP1514" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 12.2 kDa protein Rv2901c or MT2969 or MTCY274.32c FT SW:YT01_MYCTU (Q10822) (101 aa) fasta scores: E(): 3.7e-31, FT 70.29% id in 101 aa, and to Streptomyces coelicolor FT hypothetical 12.3 kDa protein SC2E1.18 TR:O69889 FT (EMBL:AL023797) (102 aa) fasta scores: E(): 2.9e-27, 67% id FT in 100 aa" FT /db_xref="InterPro:IPR019592" FT /db_xref="UniProtKB/TrEMBL:Q6NGJ9" FT /protein_id="CAE50041.1" FT /translation="MSAEELDNYEAEVELSLYREYRDVVSQFSYVVETERRFYLANAVE FT LIPHTQGGDVYYEVRMSDAWVWDMYRSARFVRYVRVITYKDVNIEELDKPDLVIPE" FT CDS complement(151461..152150) FT /transl_table=11 FT /gene="rnhB" FT /locus_tag="DIP1515" FT /product="ribonuclease HII" FT /EC_number="3.1.26.4" FT /note="Similar to Mycobacterium tuberculosis ribonuclease FT HII RnhB or Rv2902c or MT2970 or MTCY274.33c SW:RNH2_MYCTU FT (Q10793) (264 aa) fasta scores: E(): 2.8e-42, 56.71% id in FT 201 aa, and to Escherichia coli ribonuclease HII RnhB or FT B0183 SW:RNH2_ECOLI (P10442) (198 aa) fasta scores: E(): FT 2.1e-26, 46.48% id in 185 aa" FT /db_xref="GOA:Q6NGJ8" FT /db_xref="InterPro:IPR001352" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGJ8" FT /protein_id="CAE50042.1" FT /translation="MITQEHYCALPAPKIRTLKHLRTFEVTLDKHGLGPVAGVDEAGRG FT SCCGPITIAACIMPQRPIAQLQALTDSKKLSAAKRAELYPLIKKYALAWSIIHISAAEI FT DREGIQHANIFGMRRAIEKLDVAPGYVLTDAMKVPGLRCPSLPIIGGDAAVRCIAAASV FT LAKHSRDLIMDDLGGKYPEYGLEDHKGYGTKSHMDAVRHHGATPEHRYSYSNVKAAHDQ FT WLQEKTQ" FT misc_feature complement(151503..152042) FT /note="HMMPfam hit to PF01351, Ribonuclease HII" FT CDS complement(152147..153004) FT /transl_table=11 FT /locus_tag="DIP1516" FT /product="Putative signal peptidase" FT /note="Similar to Mycobacterium tuberculosis probable FT signal peptidase I LepB or Rv2903c or MT2971 or MTCY274.34C FT SW:LEP_MYCTU (Q10789) (294 aa) fasta scores: E(): 3.3e-40, FT 44.18% id in 258 aa, and to Bacillus licheniformis signal FT peptidase I Sip SW:LEP_BACLI (P42668) (186 aa) fasta FT scores: E(): 5.7e-08, 30.56% id in 229 aa" FT /db_xref="GOA:Q6NGJ7" FT /db_xref="HSSP:1B12" FT /db_xref="InterPro:IPR000223" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019756" FT /db_xref="InterPro:IPR019758" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:Q6NGJ7" FT /protein_id="CAE50043.1" FT /translation="MKRSVFSFCMMQQASLGVFHSMAETAARVLKVSSANNETVSPTEG FT VETHDKEKKQLPWFVEIPVVVVVTLLVITLLQTFVGRVYMIPSQSMEPTLHGCAGCTGD FT RIYVDKLAYRFGEPEAGDVVVFAGTESWNTGFTTSRSENPLVRGIQNAGAFVGLVAPDE FT NDLVKRIVATGGQTVQCLEGDEGVKVDGKVIDSSYTLMPPAYPVDQTTGSEACGGFYFG FT PIKVPEGNYFMMGDNRTNSADSRYHIGDQYQGTIPKENLKGKVQFKIFPFNRIGAVEDY FT DIQQ" FT misc_feature complement(152216..152344) FT /note="HMMPfam hit to PF00461, Signal peptidase I" FT misc_feature complement(152270..152329) FT /note="FPrintScan hit to PR00727, Bacterial leader FT peptidase 1 (S26A) family signature" FT misc_feature complement(152273..152314) FT /note="ScanRegExp hit to PS00761, Signal peptidases I FT signature 3." FT misc_feature complement(152471..152509) FT /note="FPrintScan hit to PR00727, Bacterial leader FT peptidase 1 (S26A) family signature" FT misc_feature complement(152621..152902) FT /note="HMMPfam hit to PF00461, Signal peptidase I" FT misc_feature complement(152720..152743) FT /note="ScanRegExp hit to PS00501, Signal peptidases I FT serine active site." FT misc_feature complement(152720..152770) FT /note="FPrintScan hit to PR00727, Bacterial leader FT peptidase 1 (S26A) family signature" FT misc_feature complement(152765..152830) FT /note="1 probable transmembrane helix predicted for DIP1516 FT by TMHMM2.0" FT misc_feature complement(152930..153004) FT /note="Signal peptide predicted for DIP1516 by SignalP 2.0 FT HMM (Signal peptide probability 0.771) with cleavage site FT probability 0.507 between residues 25 and 26" FT repeat_region complement(153543..154970) FT /note="5x repeat that includes two CDSs: The first encoding FT for a putative insertion element DNA-binding protein and FT the second one dowstream for a putative transposase FT (Similar to Escherichia coli putative transposase InsK for FT insertion sequence element IS150)" FT CDS complement(153568..154380) FT /transl_table=11 FT /locus_tag="DIP1517" FT /product="Putative transposase" FT /note="Similar to Escherichia coli putative transposase FT InsK for insertion sequence element IS150 or B3558 FT SW:INSK_ECOLI (P19769) (283 aa) fasta scores: E(): 2.3e-44, FT 45.62% id in 263 aa. Identical to DIP0434, DIP1526, DIP1809 FT and DIP2123" FT /db_xref="GOA:Q6NGI9" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6NGI9" FT /protein_id="CAE50044.1" FT /translation="MLAVSGLARSTFFDHQRRLDKPDKYADLKEQITTIFHDSNATFGY FT RRIWRALRNNNTIVNKKVVQRLMREQGLVSKIRRKKYNSYRGTVSHIADNVLGRRFIQD FT APNKVWVSDVTEFRVAGTKVYLSPVMDLFDRTILAHTLSTSPNTQLTSRSLADAIAMFS FT PGKGLIVHTDQGFQYQHASWRTLIKSVGGVQSMSRKGNCYDNAVMENFFGHLKSEMYYG FT ASFTSVDELCQAIDEYILWYNTYRLQERFKGLAPMQYRNQTLAKTLTV" FT misc_feature complement(153598..154077) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS complement(154428..154910) FT /transl_table=11 FT /locus_tag="DIP1518" FT /product="Putative insertion element DNA-binding protein" FT /note="Similar to Streptococcus pneumoniae hypothetical FT 20.7 kDa protein TR:Q9KK22 (EMBL:AF154034) (171 aa) fasta FT scores: E(): 1.3e-08, 33.75% id in 157 aa, and to Yersinia FT pestis insertion element IS1661 DNA-binding protein YPO4046 FT TR:CAC93502 (EMBL:AJ414160) (171 aa) fasta scores: E(): FT 0.00044, 25.45% id in 165 aa. Identical to DIP0435, FT DIP1525, DIP1808 and DIP2124" FT /db_xref="GOA:Q6NGJ0" FT /db_xref="InterPro:IPR002514" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:Q6NGJ0" FT /protein_id="CAE50045.1" FT /translation="MHPRSKLSQAQRELAVDLFEEGYGSRAVANRLGVRREQVRHLEDR FT FRLHGRLCLVSKRTKRQYSFDTKMEILRRHKAGELKSDLAKEYGLSSPALINHWVWQVN FT KGGPDALRPKPKGRPKSSARPAPVTEEDKLRRENELLKAEVAYLKKLRDLRDQRRG" FT misc_feature complement(154779..154844) FT /note="Predicted helix-turn-helix motif with score 1129 FT (+3.03 SD) at aa 28-49, sequence YGSRAVANRLGVRREQVRHLED" FT CDS complement(155062..155979) FT /transl_table=11 FT /locus_tag="DIP1519" FT /product="Putative membrane protein" FT /note="Similar to Corynebacterium diphtheriae secreted FT protein precursor TR:Q9XD85 (EMBL:AF109162) (339 aa) fasta FT scores: E(): 2.7e-34, 42.4% id in 250 aa" FT /db_xref="InterPro:IPR007331" FT /db_xref="UniProtKB/TrEMBL:Q6NGJ4" FT /protein_id="CAE50046.1" FT /translation="MDCWKIGRVPVLKKCIVSMVAVVGAAGVYVPQAVAENVAATGKEC FT AITVESGTVKWGIKQSWRSYILGNIAHGTWKTSGHVKDNNREKSGNDFQFSFDVDPAKT FT KITVKDGKVISSEIRTQDSSIVFTGHNDALHSEFKSPIISTSGSTLNAGSGYAVYYIPG FT KAMGQYTKDDHTEKNKKTGEGYFAQGQVSEWKTSGEDGAKLTLKGSNLQYTPQRGTDGH FT RGTIEGVDLLFMGQYDANYKPSVDDVEVELQVKNTCGAIDGTADPDTSPFGGLPKIWGI FT ILSVLGGLAALGGIFHLIMNSGLL" FT misc_feature complement(155080..155145) FT /note="1 probable transmembrane helix predicted for DIP1519 FT by TMHMM2.0" FT misc_feature complement(155875..155979) FT /note="Signal peptide predicted for DIP1519 by SignalP 2.0 FT HMM (Signal peptide probability 0.985) with cleavage site FT probability 0.509 between residues 35 and 36" FT CDS complement(156167..158476) FT /transl_table=11 FT /locus_tag="DIP1520" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR007331" FT /db_xref="UniProtKB/TrEMBL:Q6NGJ3" FT /protein_id="CAE50047.1" FT /translation="MKNQRLRHILTTTVACATLTSLASPQAFAEHVVEDAANDSAIVTT FT DNDQGSAVSEEATADDVTDGKNDPKGLAETVKEIEDVSDKAITAGEKAVSLKDAEDRKD FT PANAADAKSTGEALTWGVRSSFNNYSGGPTEMLDGAKQNGTKNRFTFQLESVTYDEATE FT KLEAKFKGGVHYQKYCADEASHSDCQLDLKIENPRIVIAKGGSHVFAKVSSKKYQSSGT FT YTNDGEDDARPIAQLYTANATFKEEDGKVTWSEIPALLTKDGAEMFSNFYPVNSGLDSL FT TFSFDKSQLGDKSNTYKRLSTDNAKYLVSSEKFDDKGLYEHHRELFKYKDSIVVASAHS FT RFKDHDKAGFAFLDRNLKEKSFKHADLNGYGAIAFDEDKGDLYYTARKKTESGNRWDED FT PTRLYKLHVDANKGFTGEPTLVHTFADDITAVGYNPATKDVAVVTKKQTAVVNKSEIKP FT VNLPEQDKLVQGTDFSSPSNLYGAALYNSETSELLPMNDGSFILNGDTSSAKKKTGGEE FT KTVKGLMVSIDPKRADAPAKLLAESATEFLGISSNAAHTDGETIVRYNKNTYKDNAVAQ FT AFTFKNGSLTKVSTGDVVKGSESDVENWGNAIITDTGALMALDSKDGKLKHVALTNFKR FT VQDEKLDEYDRKTEDVAIPQGAKTGTHQHGAILQLDKGTFYVPSFDDEAGESNEVYVLR FT KVYDPKFFPQSQEPERESSDSNNGGNSDQGTLSKPWKIILGTFGALGGILGLLGAVHHF FT FGGYIRGLLEQLNIRL" FT misc_feature complement(156215..156280) FT /note="1 probable transmembrane helix predicted for DIP1520 FT by TMHMM2.0" FT misc_feature complement(158390..158476) FT /note="Signal peptide predicted for DIP1520 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.959 between residues 29 and 30" FT promoter complement(158545..158561) FT /note="Putative DtxR-regulated promoter (tox)" FT CDS complement(158629..158742) FT /transl_table=11 FT /locus_tag="DIP1521" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGJ2" FT /protein_id="CAE50048.1" FT /translation="MTLLMVKYSSHALYEICKGQAVKSMERCGEGIHVCFH" FT CDS complement(158919..159155) FT /transl_table=11 FT /locus_tag="DIP1522" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGJ1" FT /protein_id="CAE50049.1" FT /translation="MKGLRMDAMGECIDKMQADSGDERAKPRGVAVNNHRLYLALVTAV FT KHLEQLIRWADGGTKSPQPDDIDLDEIKDLLKE" FT CDS join(159286..159528,159754..159831,159834..159941) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1523" FT /product="Putative phage related integrase (pseudogene)" FT /note="Pseudogene. Similar to parts of Corynephage 304L FT integrase Int TR:Q9ZWV7 (EMBL:Y18058) blast scores: E(): FT 4e-11, score: 69 Identities = 34/62 (54%); E(): 1.0, Score FT = 34 Identities = 20/76 (26%). Presents frameshifts at FT residues 81 and 107" FT repeat_region 160020..161447 FT /note="5x repeat that includes two CDSs: The first encoding FT for a putative insertion element DNA-binding protein and FT the second one dowstream for a putative transposase FT (Similar to Escherichia coli putative transposase InsK for FT insertion sequence element IS150)" FT CDS 160080..160562 FT /transl_table=11 FT /locus_tag="DIP1525" FT /product="Putative insertion element DNA-binding protein" FT /note="Similar to Streptococcus pneumoniae hypothetical FT 20.7 kDa protein TR:Q9KK22 (EMBL:AF154034) (171 aa) fasta FT scores: E(): 1.3e-08, 33.75% id in 157 aa, and to Yersinia FT pestis insertion element ISs1661 DNA-binding protein FT YPO4091 TR:CAC93541 (EMBL:AJ414160) (171 aa) fasta scores: FT E(): 0.00044, 25.45% id in 165 aa. Identical to DIP0435, FT DIP1518, DIP1808 and DIP2124" FT /db_xref="GOA:Q6NGJ0" FT /db_xref="InterPro:IPR002514" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:Q6NGJ0" FT /protein_id="CAE50051.1" FT /translation="MHPRSKLSQAQRELAVDLFEEGYGSRAVANRLGVRREQVRHLEDR FT FRLHGRLCLVSKRTKRQYSFDTKMEILRRHKAGELKSDLAKEYGLSSPALINHWVWQVN FT KGGPDALRPKPKGRPKSSARPAPVTEEDKLRRENELLKAEVAYLKKLRDLRDQRRG" FT misc_feature 160146..160211 FT /note="Predicted helix-turn-helix motif with score 1129 FT (+3.03 SD) at aa 28-49, sequence YGSRAVANRLGVRREQVRHLED" FT CDS 160610..161422 FT /transl_table=11 FT /locus_tag="DIP1526" FT /product="Putative transposase" FT /note="Similar to Escherichia coli putative transposase FT InsK for insertion sequence element IS150 or B3558 FT SW:INSK_ECOLI (P19769) (283 aa) fasta scores: E(): 2.3e-44, FT 45.62% id in 263 aa. Identical to DIP0434, DIP1517, DIP1809 FT and DIP2123" FT /db_xref="GOA:Q6NGI9" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q6NGI9" FT /protein_id="CAE50052.1" FT /translation="MLAVSGLARSTFFDHQRRLDKPDKYADLKEQITTIFHDSNATFGY FT RRIWRALRNNNTIVNKKVVQRLMREQGLVSKIRRKKYNSYRGTVSHIADNVLGRRFIQD FT APNKVWVSDVTEFRVAGTKVYLSPVMDLFDRTILAHTLSTSPNTQLTSRSLADAIAMFS FT PGKGLIVHTDQGFQYQHASWRTLIKSVGGVQSMSRKGNCYDNAVMENFFGHLKSEMYYG FT ASFTSVDELCQAIDEYILWYNTYRLQERFKGLAPMQYRNQTLAKTLTV" FT misc_feature 160913..161392 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS complement(161504..161845) FT /transl_table=11 FT /gene="rplS" FT /locus_tag="DIP1527" FT /product="50S ribosomal protein L19" FT /note="Similar to Streptomyces coelicolor 50S ribosomal FT protein L19 RplS or SC2E1.12 SW:RL19_STRCO (O69883) (116 FT aa) fasta scores: E(): 5.1e-37, 83.92% id in 112 aa, and to FT Escherichia coli 50S ribosomal protein L19 RplS or B2606 or FT Z3900 or ECS3469 SW:RL19_ECOLI (P02420) (114 aa) fasta FT scores: E(): 3.7e-21, 52.25% id in 111 aa" FT /db_xref="GOA:Q6NGI8" FT /db_xref="InterPro:IPR001857" FT /db_xref="InterPro:IPR018257" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGI8" FT /protein_id="CAE50053.1" FT /translation="MNLLDKVDAASLRDDIPAFRPGDTLNVHVKVIEGSKSRIQVFKGV FT VIRRQGAGVRETFTIRKVSFGIGVERTFPVHTPNIDKIEVVTRGDVRRAKLYYLRDLRG FT KAAKIKEKR" FT misc_feature complement(161507..161845) FT /note="HMMPfam hit to PF01245, Ribosomal protein L19" FT misc_feature complement(161510..161587) FT /note="FPrintScan hit to PR00061, Ribosomal protein L19 FT signature" FT misc_feature complement(161510..161839) FT /note="BlastProDom hit to PD002979, PD002979" FT misc_feature complement(161546..161593) FT /note="ScanRegExp hit to PS01015, Ribosomal protein L19 FT signature." FT misc_feature complement(161660..161749) FT /note="FPrintScan hit to PR00061, Ribosomal protein L19 FT signature" FT misc_feature complement(161750..161839) FT /note="FPrintScan hit to PR00061, Ribosomal protein L19 FT signature" FT CDS complement(162019..164295) FT /transl_table=11 FT /locus_tag="DIP1528" FT /product="Putative transcriptional accessory protein" FT /note="Similar to Streptomyces coelicolor putative FT transcriptional accessory protein SC5F2A.26c TR:Q9X7P9 FT (EMBL:AL049587) (780 aa) fasta scores: E(): 8.5e-161, FT 59.94% id in 774 aa, and to Escherichia coli protein YhgF FT or B3407 SW:YHGF_ECOLI (P46837) (773 aa) fasta scores: E(): FT 7.3e-153, 57.44% id in 766 aa" FT /db_xref="GOA:Q6NGI7" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR006641" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018974" FT /db_xref="UniProtKB/TrEMBL:Q6NGI7" FT /protein_id="CAE50054.1" FT /translation="MIAATIAKELGVKQSQIETALTLLAEGNTVPFIARYRKEATGGLD FT DSQLRIIEERASYLRELEERKHSIAEAIEEQGKLTDELRRKIFECDTKARLEDLYLPYK FT KRRKTKADNAREAGLEALVDELIAHPSADSEQRAQPYITAGFEDSKKVLEGARAILVDR FT FATDADLVGDVRERMYSTGTMRAGVVAGKETEGAKFKDYFEFSEAFDSLPSHRILALLR FT GENEGVLQLDLDAGDDEIYQGMIADRFKLDTNSAWLAQAIRWGWRTKLQVSAALDVRMR FT LKEKAEAGALEVFARNLRDVLLAAPAGQRATLGLDPGYRNGVKCAVVDATGKVLDTVIV FT YPHQPQNQWTQAVQTLASACATHHVDLMAIGNGTASRETEKLAHEVADLLKKAGGARPT FT PVVVSEAGASVYSASEAAAREFPDMDVSLRGAVSIARRLQDPLAELVKIDPKAIGVGQY FT QHDVNQTALAKTLDAVVEDAVNAVGVDLNTASVPLLARVAGVSPTIAENIVHYRDEHGA FT FVNRTALKKVPRLGPKAFEQCAGFLRISGGKDPLDASAVHPEAYPVVRKMSEATGLSVE FT KLIGNSHVLSSLRPSDFADERFGIPTITDIVAELDKPGRDPRPEFKTATFKEGIENISD FT LKPGMVLEGTVTNVAAFGAFVDVGVHQDGLVHVSALSDSFVSDPHQFVHSGQVVRVKVV FT DVDTQRKRIGLTMRLNDDPAKPRQRSETRERSGAKQKRSGSKTKNSPAANGSLADALKR FT AGFGH" FT misc_feature complement(162172..162381) FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature complement(162172..162387) FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature complement(162172..162393) FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT CDS complement(164321..164689) FT /transl_table=11 FT /locus_tag="DIP1529" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGI6" FT /protein_id="CAE50055.1" FT /translation="MIISTDLQLLISPMQWDQVASEIAQQLSAVGYNVTDIRAEVIDLT FT CEPDNMLVNQWQQEHGTIPTSEQLHRVVITGEFDGELRKATECVVRQLPEGSYWYGTSL FT VGEIEPSVTAACAWQADV" FT CDS complement(164673..165551) FT /transl_table=11 FT /gene="trmD" FT /locus_tag="DIP1530" FT /product="tRNA (guanine-N1)-methyltransferase" FT /EC_number="2.1.1.31" FT /note="Similar to Mycobacterium tuberculosis tRNA FT (guanine-N1)-methyltransferase TrmD or Rv2906c or MT2974 or FT MTCY274.37c SW:TRMD_MYCTU (Q10797) (230 aa) fasta scores: FT E(): 4.5e-36, 55.22% id in 268 aa, and to Escherichia coli FT tRNA (guanine-N1)-methyltransferase TrmD or B2607 or Z3901 FT or ECS3470 SW:TRMD_ECOLI (P07020) (255 aa) fasta scores: FT E(): 1.2e-23, 37.04% id in 278 aa. Note: The sequence in FT this CDS appears to have an insertion from residue 76 to FT residue 118 as it does not find similarities with the FT matching sequences" FT /db_xref="GOA:Q6NGI5" FT /db_xref="InterPro:IPR002649" FT /db_xref="InterPro:IPR016009" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGI5" FT /protein_id="CAE50056.1" FT /translation="MRLDVITIFPEYLDPLRHALLGKAIEKDLLSVGVHDLRLWAEDAH FT KSVDDSPFGGGPGMVMKPTVWGPALDDVATMSGKAHMGAQLDSARVHVDKPRHDELEGI FT QFAGYDAAEVAEADKPLLLVPTPAGAPFTQEDARAWSNEEHIVFACGRYEGIDQRVIED FT AKKTYRVREVSIGDYVLIGGEVAVLVIAEAVVRLIPGVLGNTQSHQDDSFSDGLLEGPS FT YTKPREWRGLEVPEVLTSGNHAKIERWRREQSLKRTWEVRPELLDGMELDRHDQAYVEG FT LRRGNTSDNLN" FT misc_feature complement(164733..165491) FT /note="HMMPfam hit to PF01746, tRNA FT (Guanine-1)-methyltransferase" FT misc_feature complement(164757..165488) FT /note="BlastProDom hit to PD004978, PD004978" FT misc_feature complement(164973..165047) FT /note="ScanRegExp hit to PS00043, Bacterial regulatory FT proteins, gntR family signature." FT CDS complement(165551..166051) FT /transl_table=11 FT /gene="rimM" FT /locus_tag="DIP1531" FT /product="Putative 16s rRNA processing protein" FT /note="Similar to Mycobacterium leprae probable 16S rRNA FT processing protein RimM or ML1616 or MLCB250.34 FT SW:RIMM_MYCLE (O33016) (179 aa) fasta scores: E(): 1.4e-23, FT 47.12% id in 174 aa, and to Bacillus halodurans probable FT 16S rRNA processing protein RimM or BH2480 SW:RIMM_BACHD FT (Q9KA14) (173 aa) fasta scores: E(): 2.3e-12, 34.5% id in FT 171 aa" FT /db_xref="GOA:Q6NGI4" FT /db_xref="InterPro:IPR002676" FT /db_xref="InterPro:IPR007903" FT /db_xref="InterPro:IPR011961" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGI4" FT /protein_id="CAE50057.1" FT /translation="MELMIGRVVKSHGIRGEVAIEVTTEEPEIRFAQGEVLNGRQGGKE FT HSLTIASVRPHQNRLLVKFKEIADRTAADSLRGTRFFAAPLDDDVDDGFYDHELEGLAV FT IHGEEKIGEVSGVIHGPAQSLLEVTLESGKEVLIPFVHDIVPEVDLDAGTCVITPPEGL FT LEL" FT misc_feature complement(165563..166042) FT /note="HMMPfam hit to PF01782, RimM" FT CDS complement(166181..166654) FT /transl_table=11 FT /gene="rpsP" FT /locus_tag="DIP1532" FT /product="30S ribosomal protein S16" FT /note="Similar to Mycobacterium leprae 30S ribosomal FT protein S16 RpsP or ML1618 or MLCB250.32 SW:RS16_MYCLE FT (O33014) (160 aa) fasta scores: E(): 8.3e-32, 70.39% id in FT 152 aa, and to Thermus aquaticus 30S ribosomal protein S16 FT RpsP or Rps16 SW:RS16_THETH (P80379) (88 aa) fasta scores: FT E(): 6.1e-11, 52.27% id in 88 aa" FT /db_xref="GOA:P62228" FT /db_xref="InterPro:IPR000307" FT /db_xref="UniProtKB/Swiss-Prot:P62228" FT /protein_id="CAE50058.1" FT /translation="MAVKIKLQRLGKIRTPHYRVVVADARTRRDGKVIENIGIYEPKQD FT PSVIKIDSERAQYWLGVGAQPTEPVLALLKVTGDWQKFKGLEGAEGTLKVAEPKPSKLE FT LFNQALAEANEGPTAEAITEKKKKAKEEAAAKAAAEAEAAAKAEEAPAEEAAE" FT misc_feature complement(166187..166330) FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature complement(166454..166630) FT /note="HMMPfam hit to PF00886, Ribosomal protein S16" FT stem_loop complement(166821..166876) FT /note="Score 54: 22/25 (88%) matches, 0 gaps" FT CDS complement(166888..168504) FT /transl_table=11 FT /gene="ffh" FT /locus_tag="DIP1533" FT /product="signal recognition particle protein" FT /note="Similar to Mycobacterium tuberculosis signal FT recognition particle protein Ffh or Rv2916c or MT2984 or FT MTCY338.04c SW:SR54_MYCTU (Q10963) (525 aa) fasta scores: FT E(): 2e-110, 66.6% id in 542 aa, and to Bacillus subtilis FT signal recognition particle protein Ffh SW:SR54_BACSU FT (P37105) (446 aa) fasta scores: E(): 3.2e-43, 51.52% id in FT 458 aa, and to Escherichia coli signal recognition particle FT protein Ffh or B2610 or Z3904 or ECS3473 SW:SR54_ECOLI FT (P07019) (453 aa) fasta scores: E(): 2.6e-38, 46.36% id in FT 468 aa" FT /db_xref="GOA:Q6NGI2" FT /db_xref="InterPro:IPR000897" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004125" FT /db_xref="InterPro:IPR004780" FT /db_xref="InterPro:IPR013822" FT /db_xref="UniProtKB/TrEMBL:Q6NGI2" FT /protein_id="CAE50059.1" FT /translation="MFESLSDRLGNALSGLRSKGKVTEADINTVAREIRLALLEADVSL FT PVVRGFISRIKDRALGVEVSKALNPAEQVIKIVDEELTGILGGETRRLNLAKNPPTVIM FT LAGLQGAGKTTLAGKLAKHLVEQGHTPMLVACDLQRPGAVQQLTIVGERAGVPTFAPDP FT GTSIDSSDHEMGTSHGDPVAVAQQGIAEAKRTQHDIVIVDTAGRLGIDEALMTQARNIR FT DAINPDEVLFVIDAMIGQDAVNTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGK FT PIMFASTGEKLEDFDIFHPERMSSRILGMGDMLTLIEQAEKKLDQQQALETAQKLGTGE FT LTLDDFLNQMLMVRRMGPLGNILKMLPGGKAMSDMADMVDEKQLDRIQAIIRGMTPAER FT NDPKILNASRRKRIALGSGVSVAEVNQLVERFFEAKKMMNKMAGQFGMGGGSRSATKKK FT PKGRKGKNGKRKPAKNRSGGMPNMGGMPGMPNMAELQKLQQQMEQGGGMPGMGGFPGMP FT KLPKGMENIDLNNLDFGQGKK" FT misc_feature complement(167191..167487) FT /note="HMMPfam hit to PF02978, Signal peptide binding FT domain" FT misc_feature complement(167563..168210) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(167575..168213) FT /note="HMMPfam hit to PF00448, SRP54-type protein, GTPase FT domain" FT misc_feature complement(167581..168426) FT /note="BlastProDom hit to PD000819, PD000819" FT misc_feature complement(167620..167661) FT /note="ScanRegExp hit to PS00300, SRP54-type proteins FT GTP-binding domain signature." FT misc_feature complement(168163..168186) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(168244..168504) FT /note="HMMPfam hit to PF02881, SRP54-type protein, helical FT bundle domain" FT CDS complement(168614..170773) FT /transl_table=11 FT /gene="glnD" FT /locus_tag="DIP1534" FT /product="[protein-PII] uridylyltransferase" FT /EC_number="2.7.7.59" FT /note="Similar to Corynebacterium glutamicum [protein-PII] FT uridylyltransferase GlnD SW:GLND_CORGL (Q9X706) (692 aa) FT fasta scores: E(): 7.1e-126, 52.6% id in 709 aa, and to FT Escherichia coli [protein-PII] uridylyltransferase GlnD or FT B0167 SW:GLND_ECOLI (P27249) (890 aa) fasta scores: E(): FT 1.1e-05, 25.76% id in 555 aa. Note It might have two FT alternative start codons at residues 3 or 4" FT /db_xref="GOA:Q6NGI1" FT /db_xref="InterPro:IPR002934" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR010043" FT /db_xref="InterPro:IPR013546" FT /db_xref="UniProtKB/TrEMBL:Q6NGI1" FT /protein_id="CAE50060.1" FT /translation="MSMMPFSATPADIRERACEQALAVISQLQIPPSCAIAATGSLARR FT EMTSYSDIDLILLHPEGSIPSGLEHFWYPIWDAKIRLDYTVRTPKECADMISAEPTAAL FT ALLDISHCSGDPQLTATTRCVVLEQWRRELKKNFNDVTDTAIARWNRSGSVVDMTHPDL FT KHGRGGLRDIELIRALALGNLCDKRPLGEERQLLLNIRTMLHQHAGRARDVLDPEFAVD FT VALDLGCEDRYDLSRSLAKAARTIDDATNAALSTARNLLPRRSSVRKAVRRPVDIDVVE FT VDGTLALSRTPNLEDPSLVLRVAAASARTGMTISESAWKQLETVPSMPPTWPSAAASNF FT FALLSSSVHSQRVIRELDEHGFWSAMIPQWEHIRGRMPRESVHIHTIDVHSMVVTANCA FT TQSIRVARPDLLFLAALFHDIGKGYGRRHEEVGAEFVVDMATTLRLNPSDTQIVETLVA FT QHTIIPHIVGRYNPTSTEAIDKLLDAVNYDLLTLDLLEALVEADAQGTAPGVWSAVLRY FT GTRELCAQARQRLTAIVPNPPSLSAVSPLSLTVVKDTLPTGKNYAAEVEWSGDYVREIV FT RVLALIAAKEWNIESAEIVVVSSDDEPASENGSVGVSARMRVYNRLGTRFDSAEFEQAY FT KSGVHSSLPPLDRGKCASFWVGNILEVRTTDRRAALGHLLGVLPDLKWARMSNPGATMI FT VQCELKDGFDRSKVERDVTRVLTNG" FT misc_feature complement(169253..169615) FT /note="HMMPfam hit to PF01966, HD domain" FT CDS complement(170779..171117) FT /transl_table=11 FT /gene="glnB" FT /locus_tag="DIP1535" FT /product="Nitrogen regulatory protein" FT /note="Similar to Corynebacterium glutamicum PII protein FT GlnB TR:Q9X705 (EMBL:AJ010319) (112 aa) fasta scores: E(): FT 3.4e-31, 73.21% id in 112 aa, and to Azospirillum FT brasilense nitrogen regulatory protein P-II GlnB FT SW:GLNB_AZOBR (P21193) (112 aa) fasta scores: E(): 5.2e-25, FT 57.14% id in 112 aa, and to Escherichia coli nitrogen FT regulatory protein P-II 1 GlnB or B2553 or Z3829 or ECS3419 FT or STY2808 SW:GLNB_ECOLI (P05826) (112 aa) fasta scores: FT E(): 2e-24, 59.82% id in 112 aa" FT /db_xref="GOA:Q6NGI0" FT /db_xref="InterPro:IPR002187" FT /db_xref="InterPro:IPR002332" FT /db_xref="InterPro:IPR011322" FT /db_xref="InterPro:IPR015867" FT /db_xref="InterPro:IPR017918" FT /db_xref="UniProtKB/TrEMBL:Q6NGI0" FT /protein_id="CAE50061.1" FT /translation="MKLVTAIVKPFTLTDIKDSLEQVGVHGMTVTESQGFGQQKGHTEV FT YRGAEYAVDFVPKIKIEIVINDDLLDDVVKAIVDSAHTGKIGDGKVWVTTVDDLIRVRT FT GERGDSAV" FT misc_feature complement(170782..171117) FT /note="BlastProDom hit to PD001194, PD001194" FT /note="HMMPfam hit to PF00543, Nitrogen regulatory protein FT P-II" FT misc_feature complement(170809..170871) FT /note="FPrintScan hit to PR00340, P-II protein signature" FT misc_feature complement(170830..170871) FT /note="ScanRegExp hit to PS00638, P-II protein C-terminal FT region signature." FT misc_feature complement(170893..170964) FT /note="FPrintScan hit to PR00340, P-II protein signature" FT misc_feature complement(170965..170982) FT /note="ScanRegExp hit to PS00496, P-II protein urydylation FT site." FT misc_feature complement(170995..171051) FT /note="FPrintScan hit to PR00340, P-II protein signature" FT misc_feature complement(171067..171114) FT /note="FPrintScan hit to PR00340, P-II protein signature" FT CDS complement(join(171281..171316,171313..171696, FT 171698..171751,171751..172059)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1536" FT /product="Putative low affinity ammonium uptake protein FT (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium glutamicum FT low affinity ammonium uptake protein AmtP SWALL:Q9X704 FT (EMBL:AJ010319) (438 aa) fasta scores: E(): 4e-53, 54.4% id FT in 261 aa. Presents multiple frameshifts at residues 103, FT 121 and 249 and lacks stop codon" FT misc_feature complement(join(171298..171363,171409..171459, FT 171496..171561,171655..171696,171751..171813, FT 171931..171996)) FT /note="2 probable transmembrane helices predicted for FT DIP1537 by TMHMM2.0" FT /note="4 probable transmembrane helices predicted for FT DIP1536 by TMHMM2.0" FT misc_feature complement(171490..171567) FT /note="ScanRegExp hit to PS01219, Ammonium transporters FT signature." FT CDS complement(172093..173580) FT /transl_table=11 FT /locus_tag="DIP1538" FT /product="Putative cell division protein" FT /note="Similar to Salmonella enterica subsp. enterica FT serovar Typhi cell division protein FtsY TR:CAD08059 FT (EMBL:AL627281) (491 aa) fasta scores: E(): 5e-39, 35.58% FT id in 503 aa, and to Escherichia coli cell division protein FT FtsY or B3464 SW:FTSY_ECOLI (P10121) (497 aa) fasta scores: FT E(): 2.6e-38, 35.79% id in 500 aa" FT /db_xref="GOA:Q6NGH9" FT /db_xref="InterPro:IPR000897" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004390" FT /db_xref="InterPro:IPR013822" FT /db_xref="UniProtKB/TrEMBL:Q6NGH9" FT /protein_id="CAE50063.1" FT /translation="MIIAQRNKKAKTVSFESAADSEQKQLTQQQRSGNYQAQGEFSFAP FT AQAPMAVKDAVPATPPVGSIQEPELPHEEAPIVDSEQPLDHQVESESDADKAAEEAQAV FT VEEAAQLREEEQLRVETEQAARDNFDALEEFDKPQPDTNNAAETEAQEAALAADVVAEA FT AAEAREVSEPSDVEEAPVAEAVTDSIDPAVGRIGRLRGRLARSHNVFGKSVLGMLSAGD FT LDEEAWEDIEALLIQADLGVGITTAVIDQLRQLIAERGVENEAQARAMLRECLINACKP FT ELDRSIKAMPYDGKPAVVLVVGVNGTGKTTTTGKLARVLVSLGHSVVLGAADTFRAAAA FT DQLETWGRRVNAHTVRGAEGADPASVAFDAVAYGVDSHADVVLIDTAGRLHNSSNLMDQ FT LGKVKRVVEKKAVVDEVLLVLDATTGQNGLAQARTFSEVVNITGVVLTKLDGTAKGGIV FT FQVQEELGVPVKLVGLGEGSDDLAPFEVEGFVDALLG" FT misc_feature complement(172096..172701) FT /note="HMMPfam hit to PF00448, SRP54-type protein, GTPase FT domain" FT misc_feature complement(172099..172908) FT /note="BlastProDom hit to PD000819, PD000819" FT misc_feature complement(172138..172179) FT /note="ScanRegExp hit to PS00300, SRP54-type proteins FT GTP-binding domain signature." FT misc_feature complement(172243..172698) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(172519..172566) FT /note="ScanRegExp hit to PS00216, Sugar transport proteins FT signature 1." FT misc_feature complement(172651..172674) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(172729..172986) FT /note="HMMPfam hit to PF02881, SRP54-type protein, helical FT bundle domain" FT CDS complement(173718..177278) FT /transl_table=11 FT /locus_tag="DIP1539" FT /product="Hypothetical protein" FT /note="No significant database matches. High content in FT alanine, leucine and valine amino acid residues Low G+C FT content (52.14%)" FT /db_xref="UniProtKB/TrEMBL:Q6NGH8" FT /protein_id="CAE50064.1" FT /translation="MTEPVHPIADLTDSLLGWASQTELELAQRLAGGGLVIAAGLSDDE FT LERIERLYGIFLTRQLLAGADFAALIGVSPALTLTTLVARARRVVEIDDFVSEFLGGLG FT LATDESSVIDIDEATAAIMGAIPQSLARFELLGAQEATDALSAIVSLCTQAGIVNNEVP FT ALLEYLDAVNAEGTVSSEDLVAAIAQQENLPLLATALQIAPAAITELIDGVAAVRQFAV FT DHHDSWFDRSREHLTPLLPRPIEFSVVSELRERPVGTVDREASVGVASREMRPRILFDA FT DRSKVYLRLPEQRLPIADDGTRGEITWRVSIEGTTKIYHTGSPWGDTSGFAESLDVHIE FT RPVRELTVQDETNEITWTVPVLAHDDPALVFSSRGTNVTDKVALHHQSLIVVTPQDVTL FT TDVVSGDDIVADSETAVEGWDKWVARYLDVSHVTSLSAVEPGKNANMETLRSIDPRQRV FT RFLAPSEPVDFLKTTGGLPVHSESLIAEFPPTPSGRTETWFLSISSFAGAGVAGDEITA FT PEPLEIPAEGGAFAVFDPELYDAPWVGEYLVRLRGPRNESFRHEFAIVEGVQANVNIVG FT ACRSFRIPSGGGLSETVLTLRSGAKEFAVEPHEVVVGPQQPAADLVVSTEEGDQLPLRF FT TPPRLNFELPMVSEPPMWRASRVTLRPRDVDMKASLRIRGTGMLGDPKVTVRNNHGAPI FT KTAKLSSCDGGLTYVAPISAIASSTNSVPSGRIDFEWTDPMSDRRVSVALADIQSTEPE FT TMELVDGIITVTGAGERGLGVWVWPATAPWETARAFSVIDGRVVLPEQLRDAGPLVAQL FT HIKDPFMTLVTPVASGVTAVTLDQPGHYVGTDPNLGALSAFLAGETEEVPDANEIMPVL FT WDMVTTGVAQGESARAVRTAFVSNPSAALTGLSESLVPAEKQPGRVVESGLVRAKFTAS FT NDESGSSHHRAPWIAVLELLGSLDAMTDQSGKPIELETDAPAPAGKKLSEGVVAKRALL FT AEIKELAGENAVAIVKTARDTTLDTACIDQSTVAIAGMAKAQQEALLEMFFSRSKIVPG FT LIMDDGNRLLAVFETFNKRVELNELLASEGLIKSAVTLLRTLRSTDKNLYSLARIRFDK FT LDGVDTNAPENMWSLTPVVSLVLALAARMHAHGFISSNKTLDSATPGWAKLADIVPDLV FT TGDLIAADAIILAMKKPGIA" FT CDS complement(177383..180868) FT /transl_table=11 FT /locus_tag="DIP1540" FT /product="Putative chromosome partition protein" FT /note="Similar to Mycobacterium leprae chromosome partition FT protein Smc or ML1629 or MLCB250.01 SW:SMC_MYCLE (Q9CBT5) FT (1203 aa) fasta scores: E(): 1.4e-70, 46.09% id in 1191 aa, FT and to Bacillus subtilis chromosome partition protein Smc FT SW:SMC_BACSU (P51834) (1186 aa) fasta scores: E(): 2.1e-34, FT 28.92% id in 1217 aa. Note: Contains various possible FT colied-coil regions throughout the whole length of the CDS" FT /db_xref="GOA:Q84F13" FT /db_xref="HSSP:1E69" FT /db_xref="InterPro:IPR003395" FT /db_xref="InterPro:IPR010935" FT /db_xref="InterPro:IPR011890" FT /db_xref="UniProtKB/TrEMBL:Q84F13" FT /protein_id="CAE50065.1" FT /translation="MYLKSLTLKGFKSFASATTLKFEPGICAVVGPNGSGKSNVVDALS FT WVMGEQGAKNLRGGKMEDVIFAGAGDRKPLGRAEVTLTIDNSDGALPIEYTEVSVTRRM FT FRDGGGEYEINGHKARLMDIQELLSDSGIGREMHVIVGQGRLSQILESRPEDRRAFIEE FT AAGVLKHRRRKEKAQRKLVGMQANLDRLSDLTAELGKQLKPLARQAEAARKAATIQSEV FT RDARLRIAGYQIHSLASSLKDAQSHHDSIAEKLEEVTEQLEEATGVQLEAEDALGKISP FT EAEKSQQLWFELSSLAERVSATQRIATDRAKNFSEVRYSGPDPDELAEKAARADAEYAE FT AEETVDILSERLESIQDNVAELEEQAQRADREHLAQVRAIADRREGIVRLLTLESQQRE FT HIVAAEAELERLREAESDIAAQARSKDAEHKDCQTQAQEARSRIEPLSQSRDAALNESR FT AADSRLEQLREQQSDIDKSISRLESKIETLESHRMTRNAVKQWEKLQSFYGVDRYIIPQ FT RGMEKAIAAALGPVAEALVGETTTAELQALDIESLARHIVITPGEDHDWRLATDLPHYA FT SWLLDYVELAPEVSSTIVQILADVVLVDSYEHGREVVNHDPRLRAVCVDGTMWGHGWVA FT VGSAERSAVEIAAEIDQAEKDLEVARLQRVELAGTLNGAHQAADEARVRSAQAQAVCRE FT QEIVVENFSRRVEAVSHEAEARKQELRRHALRVQEAQDRLNQLRQLWEETSDRLSRVEE FT DNSEEEPSTSERDKAAAALSHMRSMEVEARLSLRTAQDKAEHIRGRGDGLRRQAEYERQ FT ARARHDQAVARQRRKAEIASVVAQQCLVVAERVDDALARATQWKENAIAQRGVISARVS FT AAKDTVSALRTNANRLTEKSHAAELSLGQAQVRLEEAHEKIVEQLGIAISDLMRDYTPH FT EGFDIGAQRVRLKNAEKDLNALGKVNPLALEEFKALEERYEFLSTQLADVEQARRDLHG FT VINDVDTKILQLFTDAWKDVEAEFPQVFATLFPGGEGRLVLTEPHDMLTTGIEVEARPP FT GKRVKRLSLLSGGEKSLTALAMLVAIFRARPSPFYVMDEVEAALDDVNLRRLIALFQEL FT RDDSQLIVITHQKPTMDVANVLYGVTMRGDGITRVISQRMTPDVTKLPEPQPAE" FT misc_feature complement(177428..178036) FT /note="HMMPfam hit to PF02483, SMC family, C-terminal FT domain" FT misc_feature complement(177473..177697) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(179360..179425) FT /note="Predicted helix-turn-helix motif with score 974 FT (+2.50 SD) at aa 482-503, sequence ESKIETLESHRMTRNAVKQWEK" FT misc_feature complement(180368..180868) FT /note="HMMPfam hit to PF02463, SMC domain N terminal FT domain" FT misc_feature complement(180737..180793) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(180755..180778) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(180893..181180) FT /transl_table=11 FT /locus_tag="DIP1541" FT /product="Putative acylphosphatase" FT /EC_number="3.6.1.7" FT /note="Similar to Mycobacterium tuberculosis putative FT acylphosphatase Rv2922.1c or MT2991 or MTCY338.11bc FT SW:ACYP_MYCTU (P56543) (93 aa) fasta scores: E(): 1.3e-14, FT 52.08% id in 96 aa, and to Escherichia coli putative FT acylphosphatase YccX or B0968 or Z1320 or ECS1052 FT SW:ACYP_ECOLI (P75877) (92 aa) fasta scores: E(): 1.2e-07, FT 43.82% id in 89 aa" FT /db_xref="GOA:Q6NGH6" FT /db_xref="HSSP:1W2I" FT /db_xref="InterPro:IPR001792" FT /db_xref="InterPro:IPR017968" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGH6" FT /protein_id="CAE50066.1" FT /translation="MHDADARLTAWVLGTVQGVGFRWWVYSQAKELALAGSASNLVDGR FT VCVVAEGPKHLCEELLRRLSAHDHSGRPGRVDTVVERWSSPKGEVGFRTR" FT misc_feature complement(180899..181147) FT /note="HMMPfam hit to PF00708, Acylphosphatase" FT misc_feature complement(180917..181162) FT /note="BlastProDom hit to PD001884, PD001884" FT misc_feature complement(181115..181147) FT /note="ScanRegExp hit to PS00150, Acylphosphatase signature FT 1." FT CDS complement(181180..182667) FT /transl_table=11 FT /locus_tag="DIP1542" FT /product="Putative amino acid carrier protein" FT /note="Similar to Staphylococcus aureus (strain N315) amino FT acid carrier protein AlsT or SA1190 or SAV1356 TR:BAB57518 FT (EMBL:AP003133) (486 aa) fasta scores: E(): 5.8e-84, 48.83% FT id in 473 aa, and to Bacillus subtilis amino acid carrier FT protein AlsT SW:ALST_BACSU (Q45068) (465 aa) fasta scores: FT E(): 1.3e-73, 46.18% id in 472 aa" FT /db_xref="GOA:Q6NGH5" FT /db_xref="InterPro:IPR001463" FT /db_xref="UniProtKB/TrEMBL:Q6NGH5" FT /protein_id="CAE50067.1" FT /translation="MPVLFHSMESLQTFITDEINDNYWKIIPFLLIAAGLYFAWRTILV FT QIRMIPDMFRAVVEKNDTPESHTDAEDISAFKAFTISAASRVGTGNVAGVAVAITLGGP FT GAVFWMWMIALLGGATAFVESTLAQLWKTKTGDGTYRGGPAFYMTRGLNAKWLAVIFGV FT AITVTYGFVYNSIQSNSIAEAVGQSLGTSDNQFKIIVGAVLALLTGVIIFGGVQRIANF FT TQIVVPLMALAYMAIGIIVLVLNIEKIPGMFGDIISHALGFQEIAGATVGAAFMNGMRR FT GLFSNEAGQGSAPNAAGTANVPHPVKQGLVQTLGVYFDTILVCSITAFIILLSDPEYGA FT DVKGATLTQQALSGEVGAWGTHFITVILFFLAFSSVIGNTFLAQSNIEFFTQSKITMTI FT FRLIVVACVFGGAIGPLPLVWALGDTFAATMVVINLIAIVPLGGVAVALLKNYNQQKAK FT GLDPVFHRDMLPNVRNVECWDGSDPVTRRDHKIVREV" FT misc_feature complement(181261..182520) FT /note="HMMPfam hit to PF01235, Sodium:alanine symporter FT family" FT misc_feature complement(order(181324..181389,181405..181470, FT 181534..181599,181669..181725,181930..181995, FT 182008..182073,182134..182199,182329..182394, FT 182533..182589)) FT /note="9 probable transmembrane helices predicted for FT DIP1542 by TMHMM2.0" FT misc_feature complement(181345..181407) FT /note="FPrintScan hit to PR00175, Sodium/alanine symporter FT signature" FT misc_feature complement(181507..182466) FT /note="ProfileScan hit to PS50285, Permeases for amino FT acids and related compounds, family I." FT misc_feature complement(181519..181587) FT /note="FPrintScan hit to PR00175, Sodium/alanine symporter FT signature" FT misc_feature complement(181666..181722) FT /note="FPrintScan hit to PR00175, Sodium/alanine symporter FT signature" FT misc_feature complement(181936..181995) FT /note="FPrintScan hit to PR00175, Sodium/alanine symporter FT signature" FT misc_feature complement(182023..182079) FT /note="FPrintScan hit to PR00175, Sodium/alanine symporter FT signature" FT misc_feature complement(182296..182364) FT /note="FPrintScan hit to PR00175, Sodium/alanine symporter FT signature" FT misc_feature complement(182317..182364) FT /note="ScanRegExp hit to PS00873, Sodium:alanine symporter FT family signature." FT CDS complement(182746..183636) FT /transl_table=11 FT /locus_tag="DIP1543" FT /product="Putative formamidopyrimidine-DNA glycosylase" FT /note="Similar to Streptomyces coelicolor FT formamidopyrimidine-DNA glycosylase MutM or Fpg or SC7A1.17 FT SW:FPG_STRCO (Q9ZBQ6) (286 aa) fasta scores: E(): 9.5e-38, FT 47.78% id in 293 aa, and to Escherichia coli FT formamidopyrimidine-DNA glycosylase MutM or Fpg or B3635 FT SW:FPG_ECOLI (P05523) (269 aa) fasta scores: E(): 3e-16, FT 34.81% id in 293 aa" FT /db_xref="GOA:Q6NGH4" FT /db_xref="InterPro:IPR000191" FT /db_xref="InterPro:IPR000214" FT /db_xref="InterPro:IPR010663" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR012319" FT /db_xref="InterPro:IPR015886" FT /db_xref="InterPro:IPR015887" FT /db_xref="InterPro:IPR020629" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGH4" FT /protein_id="CAE50068.1" FT /translation="MPELPEVEVVRRGLTPYVLGATITDVAVEHPRSIRTIEGGAAELI FT GSLQGREVTRIGRRGKFLWFELTGHGDYACGFPQQGLLVHLGMSGQMLIKTQNSALHPH FT RRIRTTIVRSDAQECFELWFVDQRTFGYWAPTTFVETAHGCVPEQITHIARDLLDPQLK FT RENLARLIRKKNSEIKRVLLNQEIVSGIGNIYADEMLWAARIHPQTPASHLSVAQLSNL FT LEHGQRVMNAALDQGGTSFDSLYVNVNGQSGYFDVSLHAYGQQGQACDRCGSNIIREKF FT ANRSSHFCPRCQLMH" FT misc_feature complement(182758..182832) FT /note="ScanRegExp hit to PS01242, Formamidopyrimidine-DNA FT glycosylase signature." FT misc_feature complement(182758..183636) FT /note="BlastProDom hit to PD003680, PD003680" FT /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA FT glycosylase" FT CDS complement(183654..184403) FT /transl_table=11 FT /gene="rnc" FT /locus_tag="DIP1544" FT /product="ribonuclease III" FT /EC_number="3.1.26.3" FT /note="Similar to Mycobacterium tuberculosis ribonuclease FT III Rnc or Rv2925c or MT2995 or MTCY338.14c SW:RNC_MYCTU FT (Q10962) (240 aa) fasta scores: E(): 8.3e-42, 55.26% id in FT 228 aa, and to Escherichia coli ribonuclease III Rnc or FT B2567 or Z3848 or ECS3433 SW:RNC_ECOLI (P05797) (226 aa) FT fasta scores: E(): 9.9e-24, 40.95% id in 210 aa" FT /db_xref="GOA:Q6NGH3" FT /db_xref="InterPro:IPR000999" FT /db_xref="InterPro:IPR001159" FT /db_xref="InterPro:IPR011907" FT /db_xref="InterPro:IPR014720" FT /db_xref="UniProtKB/Swiss-Prot:Q6NGH3" FT /protein_id="CAE50069.1" FT /translation="MSRRKKRVTGEQALRLEFESVDHQPLIDALGVDIPRELLVLALTH FT RSFANENGMLPNNERLEFLGDSVLGLSVAGQLYQQYTSSPESDISKMRASIVSRYGLAD FT IAREINLGQHILLGKGEQLHDGRSKDSILADTTEALLGAIYLAHGFEIARDTVLRLFKH FT KIDTASATGLHQDWKTTLQERLAERNLEMPTYTSTVTGPEHEQTFTAEVAVHGTVLGTG FT VGTNKKLAEQAAAHKAVGFLQDNPAFV" FT misc_feature complement(183672..183878) FT /note="ProfileScan hit to PS50137, Double stranded FT RNA-binding domain (dsRBD) profile." FT misc_feature complement(183675..183875) FT /note="HMMSmart hit to SM00358, Double-stranded RNA binding FT motif" FT misc_feature complement(183678..183875) FT /note="HMMPfam hit to PF00035, Double-stranded RNA binding FT motif" FT misc_feature complement(183894..184295) FT /note="HMMSmart hit to SM00535, Ribonuclease III family" FT misc_feature complement(183957..184229) FT /note="HMMPfam hit to PF00636, RNase3 domain." FT misc_feature complement(183957..184316) FT /note="ProfileScan hit to PS50142, Ribonuclease III family FT domain profile." FT misc_feature complement(184203..184229) FT /note="ScanRegExp hit to PS00517, Ribonuclease III family FT signature." FT CDS complement(184400..184930) FT /transl_table=11 FT /locus_tag="DIP1545" FT /product="Conserved hypothetical protein" FT /note="Similar to the C-terminal region of Mycobacterium FT tuberculosis hypothetical 22.4 kDa protein Rrv2926c or FT MT2996 or MTCY338.15c SW:YT26_MYCTU (Q10972) (207 aa) fasta FT scores: E(): 9.5e-13, 30.46% id in 174 aa" FT /db_xref="InterPro:IPR003772" FT /db_xref="UniProtKB/TrEMBL:Q6NGH2" FT /protein_id="CAE50070.1" FT /translation="MNTESSPFVFNVGTLVRGSAVPASVQQTGPSPVRIGPAMIAIPEN FT GDVTVNATITPLGDALMVDADVSAELSGECVRCLQHMAPRAQFHVNEVFALTEDFITGD FT DGDGEDDDVTVITGDTVDILQAVIDEAGMSLPFNPQCEGGCVQSDSDVPEPDGIAGETE FT LVDPRWAGLEKFL" FT misc_feature complement(184409..184891) FT /note="HMMPfam hit to PF02620, Uncharacterized ACR, FT COG1399" FT CDS complement(184971..185684) FT /transl_table=11 FT /locus_tag="DIP1546" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 27.0 kDa protein Rv2927c or MT2997 or MTCY338.16c FT SW:YT27_MYCTU (Q10973) (245 aa) fasta scores: E(): 9e-21, FT 47.89% id in 238 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NGH1" FT /protein_id="CAE50071.1" FT /translation="MYRVFECFDELIDILEKSTGVPMTSNCMVPRHHMLALIDEARNAL FT PNEIDDAQDVIDQQDEILRGAQERARTTIDEANEEARRTVTQSREEADALVADAEEHAE FT RVVRQAQDEADRLVDGARREADDTVNRAQAEAERLIASGNDQYQRSVDDGLAEQQRLVS FT EAEVVRRANEEAHRVVDAAHADSNRLRKECDTFVENKLADLEESLSSTLRTISRDRAAL FT RRGAGASGGGNHSQS" FT stem_loop complement(185816..185919) FT /note="Score 53: 35/45 (77%) matches, 1 gaps" FT CDS complement(185948..187294) FT /transl_table=11 FT /gene="gdh" FT /locus_tag="DIP1547" FT /product="NADP-specific glutamate dehydrogenase" FT /EC_number="1.4.1.4" FT /note="Similar to Corynebacterium glutamicum NADP-specific FT glutamate dehydrogenase Gdh SW:DHE4_CORGL (P31026) (447 aa) FT fasta scores: E(): 6.8e-138, 77.84% id in 465 aa, and to FT Escherichia coli NADP-specific glutamate dehydrogenase GdhA FT or B1761 SW:DHE4_ECOLI (P00370) (447 aa) fasta scores: E(): FT 3.6e-97, 59.55% id in 445 aa" FT /db_xref="GOA:Q6NGH0" FT /db_xref="HSSP:1AUP" FT /db_xref="InterPro:IPR006095" FT /db_xref="InterPro:IPR006096" FT /db_xref="InterPro:IPR006097" FT /db_xref="InterPro:IPR014362" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NGH0" FT /protein_id="CAE50072.1" FT /translation="MSPIDEKVQGYYELLLKRNPAEPEFHQAVNEVLDSLKIVLEKDPH FT YADYGLIQRLCEPERQLMFRVPWVDDNGVVQVNRGFRVQFNSAIGPYKGGLRFHPSVNL FT GIIKFLGFEQIFKNSLTGLPIGGGKGGSDFDPKGKSDVEIMRFCQSFMTELYRHIGEYR FT DVPAGDIGVGGREIGYLFGQYRRLANQHESGVLTGKGLTWGGSLVRTEATGYGLVYFTA FT EMLAHHGQSFEGKKVIVSGSGNVAIYAIEKAQELGATVIGFSDSSAWVETPNGVDVAKL FT KEIKEVRRERVSSYVDEVEGAILHTEGSIWDLTCDVALPCATQNELDGEHAKKLADNGC FT AFVAEGANMPSTADAIEVYRERGIHFGPGKAANAGGVATSALEMQQNASRDSWSFEYAD FT QRLREIMKGIFKNCESTAREYGHEGDYVVGANIAGFKKVADAMLAQGVI" FT misc_feature complement(185957..186685) FT /note="HMMPfam hit to PF00208, FT Glutamate/Leucine/Phenylalanine/Valine dehydrogenase" FT misc_feature complement(186146..186181) FT /note="FPrintScan hit to PR00082, FT Glutamate/leucine/phenylalanine/valine dehydrogenase FT signature" FT misc_feature complement(186524..186586) FT /note="FPrintScan hit to PR00082, FT Glutamate/leucine/phenylalanine/valine dehydrogenase FT signature" FT misc_feature complement(186644..186712) FT /note="FPrintScan hit to PR00082, FT Glutamate/leucine/phenylalanine/valine dehydrogenase FT signature" FT misc_feature complement(186731..187123) FT /note="HMMPfam hit to PF02812, Glu/Leu/Phe/Val FT dehydrogenase, dimerisation domain" FT misc_feature complement(186887..186928) FT /note="ScanRegExp hit to PS00074, Glu / Leu / Phe / Val FT dehydrogenases active site." FT misc_feature complement(186908..186952) FT /note="FPrintScan hit to PR00082, FT Glutamate/leucine/phenylalanine/valine dehydrogenase FT signature" FT CDS 187712..188878 FT /transl_table=11 FT /locus_tag="DIP1548" FT /product="Putative glycerate kinase" FT /note="Similar to Bacillus halodurans glycerate kinase GlxK FT or BH0555 SW:GRK_BACHD (Q9Z9P2) (380 aa) fasta scores: E(): FT 1e-29, 35.14% id in 350 aa, and to Bacillus subtilis FT glycerate kinase GlxK or S14A SW:GRK_BACSU (P42100) (382 FT aa) fasta scores: E(): 7.1e-28, 32.4% id in 395 aa, and to FT Escherichia coli glycerate kinase 1 GlxK or GlxB5 or B0514 FT SW:GRK1_ECOLI (P77364) (381 aa) fasta scores: E(): 7.6e-25, FT 33.93% id in 333 aa" FT /db_xref="GOA:Q6NGG9" FT /db_xref="InterPro:IPR004381" FT /db_xref="InterPro:IPR018193" FT /db_xref="UniProtKB/TrEMBL:Q6NGG9" FT /protein_id="CAE50073.1" FT /translation="MPHPNRTFKIVIAPDSFKSTATTSQAAAFIAEGIQAAVQSNECEG FT INVEITTVPMADGGEGTSSCFEGIDITLPTTDANGRLTEATYRFDPQSETAYIDVAAAS FT GLPAVEDELRPLTADTYGTGVLIADAQTRGARRIVLGLGGTATTDAGTGILVALGATPM FT NKQGLPLRQGGGALSELDYLDTAQVNIPAAAMSWVLLTDVNSPATGPEGTAHIFAAQKG FT ASGEDIAMLENGIATICAVSGVDPTTPGLGAAGGLPIGITWLSSLIHGNNNNVVIMPGA FT QVVANACNLEEHIANADLVITGEGRLDHTSFNTKVVGTIARLAAQHDVDMMVLAGSVEP FT SCSQQFDHLSMTAVELPDSKEHSSVRDQIRSAAQQAFTTYALTKTVQG" FT misc_feature 187733..188866 FT /note="HMMPfam hit to PF02595, Uncharacterized BCR, FT COG1929" FT CDS complement(188848..189276) FT /transl_table=11 FT /locus_tag="DIP1549" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGG8" FT /protein_id="CAE50074.1" FT /translation="MPRIVFDCLIDQPAARHLIERIDALTALLVRDNVVYSAHVDHQPQ FT SPQPDSVREELTTTYLRDRGAETADELSDSVVALDELSLQRFTIVVDGLNGSLNETAMT FT YSRLLTPAARLSNDALDLTDEQRYEVPAAYPWTVFVSA" FT CDS 189320..190636 FT /transl_table=11 FT /locus_tag="DIP1550" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="GOA:Q6NGG7" FT /db_xref="InterPro:IPR011146" FT /db_xref="UniProtKB/TrEMBL:Q6NGG7" FT /protein_id="CAE50075.1" FT /translation="MYSHPTAIQTMSDGTIKQVNPFSGTEVWTVPGRGHRPLSTSQGNI FT TPITPSDHSNTCAFCSDRYLDTPPEKARIVRDDDGWTILRGVLPDRLHDSVPAFRRVSN FT LFEIVSYDYWRNNYGFSMDLETTDWMQSYISTEKGREHVLATVRTKLQAAGIQDMPDDA FT TLLPQGEAFFGGGHDLIIGQRHFVPDATQSDQLASAGTLSPDEHFAFIFFTVDALREAY FT QRNRYAPYVAVFQNWLKPAGASFDHLHKQLVAIDERGVHGETEIAKLRNYPNMYNEWAV FT DYAGQRNLIIAENDHAVCFAGFGHRYPTLEVFSRSATPEPWLQTNEEIKAMSDLIHACH FT AAAGPHVPCNEEWHHKPIDLDIAMPWRVMIKWRVSTLAGFEGSTKVYLNTLSPWDVRDR FT VVPRLYELRDSGAIDGSIRIATECSVRRNSLLYNKNLNM" FT CDS 190680..191984 FT /transl_table=11 FT /locus_tag="DIP1551" FT /product="Putative peptidase" FT /note="Similar to Streptomyces coelicolor peptidase FT SCD17.07c TR:Q9RKM4 (EMBL:AL118515) (423 aa) fasta scores: FT E(): 6.6e-71, 45.3% id in 415 aa, and to Thermoplasma FT volcanium carboxypeptidase TVG0758219 TR:BAB59893 FT (EMBL:AP000993) (404 aa) fasta scores: E(): 2.1e-34, 34.03% FT id in 379 aa" FT /db_xref="GOA:Q6NGG6" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR010168" FT /db_xref="InterPro:IPR011650" FT /db_xref="InterPro:IPR017439" FT /db_xref="UniProtKB/TrEMBL:Q6NGG6" FT /protein_id="CAE50076.1" FT /translation="MTFNEAKSSTMKTVLAHSMERLEWQRDIYKRMHQHPELSGTEQWT FT AQMICDELDQFDCEVTTHIGGYGIVAVFHNGDGPCVLMRADFDGLPVLELTGAEFASTR FT KQDRNGTLVPVMHACGHDMHTTALLGCCAALNAHRDAWSGTFVALFQPSEENGQGAAAM FT VADGLGRAIPRPDVCFGQHIVPGPAGQVMTMPGPALAACDSIEIIITGRSAHGSMPHNA FT IDPTYIASMIVIRLQGIVGREIPPDQFAVVSVGTLESGNSNNTIPGTARIVVNCRMYDE FT GVRDTLYSAIERVVRAECAAQSTTVDPTFRYFAHGPLTSNNSGVFATVRPQLDAHFGDQ FT STQAEKWTASEDFSNIPDAFQAPYLFWTVGCTPQQQWEAACEAGTIDQDIPVNHSGTFL FT PDFVPTVTSSTQAAIIAVLSYLSPDTPPQSDLAHN" FT misc_feature 191022..191723 FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40" FT CDS 192107..194536 FT /transl_table=11 FT /locus_tag="DIP1552" FT /product="Putative glycogen phosphorylase" FT /note="Similar to Escherichia coli maltodextrin FT phosphorylase MalP or B3417 SW:PHSM_ECOLI (P00490) (796 aa) FT fasta scores: E(): 5.5e-100, 44.48% id in 780 aa, and to FT Bacillus subtilis glycogen phosphorylase GlgP SW:PHSG_BACSU FT (P39123) (798 aa) fasta scores: E(): 1.2e-98, 45.43% id in FT 777 aa" FT /db_xref="GOA:Q6NGG5" FT /db_xref="HSSP:1K06" FT /db_xref="InterPro:IPR000811" FT /db_xref="InterPro:IPR011833" FT /db_xref="UniProtKB/TrEMBL:Q6NGG5" FT /protein_id="CAE50077.1" FT /translation="MSKHRSPETGHASASVSHPACADMNIAGYVRAASGTAPADATDRK FT FWFGLSAAVMQQLADNWDATTKAYSATRQQHYFSAEFLMGRALLNNLTNLGLDESVAEE FT VRNNGHELADVLEAENDAALGNGGLGRLAACFLDSCATQDFPVTGYGILYRYGLFKQTF FT DNGFQTEHPDAWREDGYPFTIRRDDQQRTVTFDDMVVRATPYDMPITGYGTDNVGTLRL FT WKAEPVEEFDYDAFNSQRFTDAIVEREQVMDICRVLYPNDTTYAGKVLRVRQQYFFVSA FT SLQQMIDNYIEHHGTDLRDFHKYNSIQLNDTHPVLAIPELMRLLLDEHNMSWDDAWAVV FT QGTFAYTNHTVLAEALEQWNVSIFQQLFYRVWEITQEIDRRFREEMQARGVDQGQIDYM FT APVQDGNVHMAWIACYAAFSINGVAALHTEIIKAETLRDWHEFWPEKFDNKTNGVTPRR FT WLKMCNPRLSALLTRLLGSDAWVTDLSELHKLREFVNDDAVMKELLEIKTANKVDFARW FT IEDRQGIAVDSDSIYDTQIKRLHEYKRQLLNALYIMDLYFRIKEDGETGIAPRTFIFGA FT KAAPGYIRAKAIIKLINAIAELVNNDPEVSKTLKVVFVENYNVSPAEHIIPASDVSEQI FT STAGKEASGTSNMKFMMNGALTLGTLDGANVEILDAVGDDNAYIFGAKNEELPELKAHY FT NPYEKYETVPGLKRVLDALVNGTVNDDNSGWFHDLRGSLLDGNGWETPDVYYVLGDYAS FT YRETRDRMANDYMSDRLAWARKCWINICESGRFSSDRTISDYAREVWKIDATPINH" FT misc_feature 192431..192691 FT /note="HMMPfam hit to PF00343, Carbohydrate phosphorylase" FT misc_feature 192701..194518 FT /note="HMMPfam hit to PF00343, Carbohydrate phosphorylase" FT misc_feature 194027..194065 FT /note="ScanRegExp hit to PS00102, Phosphorylase FT pyridoxal-phosphate attachment site." FT CDS complement(194602..196023) FT /transl_table=11 FT /gene="pyk" FT /locus_tag="DIP1553" FT /product="Pyruvate kinase" FT /EC_number="2.7.1.40" FT /note="Similar to Corynebacterium glutamicum pyruvate FT kinase Pyk SW:KPYK_CORGL (Q46078) (475 aa) fasta scores: FT E(): 1.3e-146, 83.36% id in 469 aa, and to Bacillus FT psychrophilus pyruvate kinase Pyk SW:KPYK_BACPY (P51182) FT (586 aa) fasta scores: E(): 6.9e-64, 41.45% id in 480 aa" FT /db_xref="GOA:Q6NGG4" FT /db_xref="HSSP:1AQF" FT /db_xref="InterPro:IPR001697" FT /db_xref="InterPro:IPR011037" FT /db_xref="InterPro:IPR015793" FT /db_xref="InterPro:IPR015794" FT /db_xref="InterPro:IPR015795" FT /db_xref="InterPro:IPR015813" FT /db_xref="InterPro:IPR018209" FT /db_xref="UniProtKB/TrEMBL:Q6NGG4" FT /protein_id="CAE50078.1" FT /translation="MERRTKIVCTLGPAVASREGILGLVKAGMNVARMNMSHGDHADHE FT KNYQWVREATDETGRAVGILADLQGPKIRLGRFIDGATVWENGEIVRITVDDIEGTHDR FT VSTTYKNLAKDAKPGDRLLVDDGKVALRCVEVDGNDVVCEVVEGGPVSNNKGVSLPGMD FT ISVPALSEKDIADLRFALNLGVDIIALSFVRSPADVELVHAIMDEEGRRCPVIAKLEKP FT EAMDALESIVLAFDGIMIARGDLGVECPLEQVPLFQKRAIQIARENAKPVIVATQMLDS FT MIENLRPTRAEASDVANAVLDGADAVMLSGETSVGIDPANVVRTMSRIVSYAEIDGRVP FT NLAHIPRTKRGVISYSARDIAERLNAKALVAFTSSGDTAKRVARLHSQLPLLVFTPHQE FT VRSQLALTWGVETFLTDEVKDTDEMMRTIDEQLLALDTYSEDDMIVLVAGTPPGVQGNT FT NMIHVHHLGEDLNGL" FT misc_feature complement(194629..194970) FT /note="HMMPfam hit to PF02887, Pyruvate kinase, alpha/beta FT domain" FT misc_feature complement(194632..196017) FT /note="BlastProDom hit to PD001009, PD001009" FT misc_feature complement(194989..196023) FT /note="HMMPfam hit to PF00224, Pyruvate kinase, barrel FT domain" FT misc_feature complement(195043..195093) FT /note="FPrintScan hit to PR01050, Pyruvate kinase family FT signature" FT misc_feature complement(195094..195150) FT /note="FPrintScan hit to PR01050, Pyruvate kinase family FT signature" FT misc_feature complement(195151..195225) FT /note="FPrintScan hit to PR01050, Pyruvate kinase family FT signature" FT misc_feature complement(195226..195300) FT /note="FPrintScan hit to PR01050, Pyruvate kinase family FT signature" FT misc_feature complement(195301..195381) FT /note="FPrintScan hit to PR01050, Pyruvate kinase family FT signature" FT misc_feature complement(195349..195387) FT /note="ScanRegExp hit to PS00110, Pyruvate kinase active FT site signature." FT misc_feature complement(195427..195471) FT /note="FPrintScan hit to PR01050, Pyruvate kinase family FT signature" FT misc_feature complement(195796..195846) FT /note="FPrintScan hit to PR01050, Pyruvate kinase family FT signature" FT CDS complement(196233..197084) FT /transl_table=11 FT /locus_tag="DIP1554" FT /product="prolipoprotein diacylglyceryl transferase" FT /EC_number="2.4.99.-" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT prolipoprotein diacylglyceryl transferase MT1649 FT TR:AAK45918 (EMBL:AE007029) (468 aa) fasta scores: E(): FT 2.6e-55, 52.19% id in 274 aa, and to Bacillus subtilis FT prolipoprotein diacylglyceryl transferase Lgt or GerF FT SW:LGT_BACSU (O34752) (269 aa) fasta scores: E(): 2.4e-13, FT 32.04% id in 259 aa" FT /db_xref="GOA:P60969" FT /db_xref="InterPro:IPR001640" FT /db_xref="UniProtKB/Swiss-Prot:P60969" FT /protein_id="CAE50079.1" FT /translation="MGNIQYLAAIPSPPQGVWHLGPVPIRAYALCIIVGIFVAMKIGSV FT RYQQRGGNPDLVIDAGIVAVIAGIIGGRLYHVLTDNQKYFCADCNPVDVFKITNGGLGI FT WGAVALGTIAVYFYLKKKGVAFALFADAVAPGIILAQAIGRLGNWFNQELYGRETSVPW FT ALEIYYRVDASGKFAPLTGHSTGEVMATVHPTFLYEMIWNLVIFAVLLWADKKFQLGHG FT RVFALYVAGYTAGRFVVENMRADDATMVFGLRINVIVSVVVCAIAVGALFALRRGRESI FT SS" FT misc_feature complement(196254..197051) FT /note="HMMPfam hit to PF01790, Prolipoprotein FT diacylglyceryl transferase" FT misc_feature complement(order(196260..196325,196371..196427, FT 196449..196514,196647..196712,196728..196793, FT 196854..196910,196950..197015)) FT /note="7 probable transmembrane helices predicted for FT DIP1554 by TMHMM2.0" FT misc_feature complement(196698..196721) FT /note="ScanRegExp hit to PS00030, Eukaryotic RNA FT Recognition Motif (RRM) RNP-1 region signature." FT CDS complement(197156..197968) FT /transl_table=11 FT /gene="trpC2" FT /locus_tag="DIP1555" FT /product="indole-3-glycerol phosphate synthase" FT /EC_number="4.1.1.48" FT /note="Similar to Mycobacterium tuberculosis FT indole-3-glycerol phosphate synthase TrpC or Rv1611 or FT MT1646 or MTCY01B2.03 SW:TRPC_MYCTU (O06129) (272 aa) fasta FT scores: E(): 1.4e-52, 55.59% id in 268 aa, and to FT Streptomyces coelicolor indole-3-glycerol phosphate FT synthase 1 TrpC1 or TrpC or SC4G6.08c SW:TRC1_STRCO FT (O68814) (269 aa) fasta scores: E(): 1.1e-44, 48.28% id in FT 263 aa" FT /db_xref="GOA:Q6NGG3" FT /db_xref="HSSP:1A53" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013798" FT /db_xref="UniProtKB/TrEMBL:Q6NGG3" FT /protein_id="CAE50080.1" FT /translation="MAMVTVFDEIIAGVVEDVAAREAQVSFQDIKAQSRLCAPPRDACG FT ALLASGCGIIAEIKRAAPGQGLLAEIPSPVDLALELESGGAALIACHTERRRFHGSLTE FT MAKIRRHVSVPVMCRDFIVDPYQIHEARCYGADMVPLRVAALAQSRLVALIDRVESLGM FT AALVEVRDTAEASRALDAGARIIGVNARDFSTMTLNRAAFCEIAPGLPSDVVRVALSGV FT RNAKELLDYASAGADAVVIGQSIVTAQSPRGATRALVAAGQHPSCPSR" FT misc_feature complement(197195..197953) FT /note="BlastProDom hit to PD001511, PD001511" FT /note="HMMPfam hit to PF00218, Indole-3-glycerol phosphate FT synthase" FT misc_feature complement(197228..197335) FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS complement(198081..198656) FT /transl_table=11 FT /locus_tag="DIP1556" FT /product="Putative membrane protein" FT /note="Low similarity to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT1645 TR:AAK45914 FT (EMBL:AE007029) (235 aa) fasta scores: E(): 1e-08, 28.64% FT id in 206 aa" FT /db_xref="InterPro:IPR011746" FT /db_xref="InterPro:IPR019051" FT /db_xref="UniProtKB/TrEMBL:Q6NGG2" FT /protein_id="CAE50081.1" FT /translation="MWGSSRMPWLHVEAFDDKSGAKQVDMLGATWSTETTAVALVLIAA FT CAAILVLRRAGRRFVAVVSAVAAAGGLWAPVQLLFNEPDATRALNILTSHAATGHAKDG FT AALTGWAEITHISVQAPSVILAMCGAGFALIAAIIATMNPGQDSVQKSRFERQQARNEK FT IESELEEAPDSGRVLWDAIDADIDPTDR" FT misc_feature complement(order(198222..198287,198414..198479, FT 198501..198566)) FT /note="3 probable transmembrane helices predicted for FT DIP1556 by TMHMM2.0" FT CDS complement(198757..199107) FT /transl_table=11 FT /gene="hisI" FT /locus_tag="DIP1557" FT /product="phosphoribosyl-AMP cyclohydrolase" FT /EC_number="3.5.4.19" FT /note="Similar to Mycobacterium tuberculosis FT phosphoribosyl-AMP cyclohydrolase HisI or Rv1606 or FT MT1641.1 or MTV046.04 SW:HIS3_MYCTU (O53909) (115 aa) fasta FT scores: E(): 7.4e-26, 63.3% id in 109 aa, and to FT Streptomyces coelicolor putative phosphoribosyl-AMP FT cyclohydrolase SC4G6.13c TR:Q9S2U1 (EMBL:AL096884) (128 aa) FT fasta scores: E(): 1.7e-23, 59.63% id in 109 aa" FT /db_xref="GOA:P60541" FT /db_xref="InterPro:IPR002496" FT /db_xref="UniProtKB/Swiss-Prot:P60541" FT /protein_id="CAE50082.1" FT /translation="MDDPASYELDPSIAQRVKFNSAGLVPAVVQSTDGEVLMLAWMDAH FT ALAYTIATRKGTYFSRSRNEYWIKGLTSGHTQQVTGLQLDCDGDTVLMTVVQQGGACHT FT GDRTCFDADVII" FT misc_feature complement(198763..198996) FT /note="HMMPfam hit to PF01502, Phosphoribosyl-AMP FT cyclohydrolase" FT misc_feature complement(198766..198996) FT /note="BlastProDom hit to PD002610, PD002610" FT CDS complement(199129..199905) FT /transl_table=11 FT /gene="hisF" FT /locus_tag="DIP1558" FT /product="imidazole glycerol phosphate synthase subunit" FT /EC_number="4.1.3.-" FT /note="Similar to Corynebacterium glutamicum HisF protein FT SW:HIS6_CORGL (O31139) (257 aa) fasta scores: E(): 1.8e-73, FT 82.1% id in 257 aa, and to Streptomyces coelicolor putative FT HisF, cyclase SC4G6.17c TR:Q9S2T7 (EMBL:AL096884) (251 aa) FT fasta scores: E(): 3.9e-60, 68.48% id in 257 aa" FT /db_xref="GOA:P60714" FT /db_xref="InterPro:IPR004651" FT /db_xref="InterPro:IPR006062" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:P60714" FT /protein_id="CAE50083.1" FT /translation="MPVAVRVIPCLDVKNGRVVKGVNFEGLKDAGDPVELAARYDAEGA FT DELTFLDVSASQDGRGTMLEVVRRTADQVFIPLTVGGGVRSAEDVDQLLRAGADKVSVN FT TSAIARPELLQELSQRFGAQCVVLSVDARRVPEGGKPQPSGFEVTTHGGTRSAGIDAVE FT WAQKGEALGVGEILLNSMDGDGTKRGFDLELIEKVRHAVSIPVIASGGAGKPEDFPPAI FT ASGADAVLAASIFHFGEVTISEVKKQVVAAGYEVRS" FT misc_feature complement(199159..199893) FT /note="HMMPfam hit to PF00977, Histidine biosynthesis FT protein" FT misc_feature complement(199195..199302) FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT misc_feature complement(199579..199686) FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS complement(199996..200781) FT /transl_table=11 FT /gene="impA" FT /locus_tag="DIP1559" FT /product="inositol monophosphate phosphatase" FT /note="Similar to Corynebacterium glutamicum inositol FT monophosphate phosphatase ImpA TR:O52736 (EMBL:AF045998) FT (259 aa) fasta scores: E(): 3.2e-42, 50.42% id in 236 aa, FT and to Mycobacterium smegmatis inositol monophosphate FT phosphatase ImpA TR:O51845 (EMBL:AF005905) (276 aa) fasta FT scores: E(): 8e-34, 42.35% id in 255 aa" FT /db_xref="GOA:Q6NGG1" FT /db_xref="InterPro:IPR000760" FT /db_xref="UniProtKB/TrEMBL:Q6NGG1" FT /protein_id="CAE50084.1" FT /translation="MTDVRDLYHIAEAILDDAERLFIQGIGSAPTTFKNGGDFATDMDL FT KIEQYLRTQLVMMTGIPVFGEEYGGKLGTPMWVVDPIDGTANYAAGNPMSSILISLIAD FT GEPVIGLTSVPMVGQRFGAYADSPLLLNGQVQPQMNARDQRHVSHVGFTSIASPRESSF FT PTVVRQGLLGALAQTYLRPRITGSVGIDLAYAAAGIFDAALSLSPNLWDNAAGIMLVRA FT AGGVVTDLDGNQWTPTSQGVIVGSAQSHEVLMATIDTMR" FT misc_feature complement(200008..200688) FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family" FT misc_feature complement(200107..200163) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(200167..200214) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(200509..200568) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(200569..200619) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT CDS complement(200778..201506) FT /transl_table=11 FT /gene="hisA" FT /locus_tag="DIP1560" FT /product="phosphoribosylformimino-5-aminoimidazole FT carboxamide ribotide isomerase" FT /EC_number="5.3.1.16" FT /note="Similar to Streptomyces coelicolor FT phosphoribosylformimino-5-aminoimidazole carboxamide FT ribotide isomerase HisA or SC4G6.19c SW:HIS4_STRCO (P16250) FT (240 aa) fasta scores: E(): 2.2e-52, 61.6% id in 237 aa, FT and to Corynebacterium glutamicum FT phosphoribosylformimino-5-amino-1-phosphoribosyl- FT 4-imidazolecarboxamide isomerase HisA TR:O68602 FT (EMBL:AF051846) (245 aa) fasta scores: E(): 8.3e-70, 77.68% FT id in 242 aa" FT /db_xref="GOA:P60580" FT /db_xref="InterPro:IPR006062" FT /db_xref="InterPro:IPR010188" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:P60580" FT /protein_id="CAE50085.1" FT /translation="MTFTLLPAVDVVDGQAVRLDQGEAGTEKSYGSPIAAALKWQEQGA FT SWLHFVDLDAAFNRGSNHELMAEVVKNLDINVELTGGIRDDASLKRALATGARRVNIGT FT AALEKPEWIEKVLGEYGDAIAVDIAVRNIDGQWRTRGNGWVSDGGDLWEVLERLDSQGC FT TRFVVTDVSKDGTLSGPNIDLLRDVSAATDAKVVASGGISTLEDVLELARYEDEGIDSA FT IIGKALYEGRFTLKEALAAL" FT misc_feature complement(200781..201494) FT /note="HMMPfam hit to PF00977, Histidine biosynthesis FT protein" FT misc_feature complement(200817..200933) FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT misc_feature complement(201183..201290) FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS complement(201604..202236) FT /transl_table=11 FT /gene="hisH" FT /locus_tag="DIP1561" FT /product="amidotransferase" FT /EC_number="2.4.2.-" FT /note="Similar to Streptomyces coelicolor amidotransferase FT HisH or SC4G6.20c SW:HIS5_STRCO (P16249) (222 aa) fasta FT scores: E(): 1.2e-53, 67.61% id in 210 aa, and to FT Corynebacterium glutamicum amidotransferase HisH FT SW:HIS5_CORGL (O69043) (211 aa) fasta scores: E(): 1.2e-45, FT 63.31% id in 199 aa" FT /db_xref="GOA:P60598" FT /db_xref="InterPro:IPR000991" FT /db_xref="InterPro:IPR010139" FT /db_xref="InterPro:IPR016226" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/Swiss-Prot:P60598" FT /protein_id="CAE50086.1" FT /translation="MKKVALLDYGSGNLRSAQRALERVGAEVEVTNDPDVVLAADGLLV FT PGVGAFDACMKGLKAVQGDRMIGQRLAGGRPVMGICVGMQIMFDSGNEHGISAAGCGQW FT PGNVEKLEARVLPHMGWNTVEAAQDSQLFAGLDADTRFYFVHSYGVRWWEFEGDGLTRA FT PLVTWAQHESDRFVAAVENGALMATQFHPEKSGDAGAQLLRNWIDLL" FT misc_feature complement(201610..202224) FT /note="HMMPfam hit to PF00117, Glutamine amidotransferase FT class-I" FT misc_feature complement(201931..201963) FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT misc_feature complement(201976..202011) FT /note="ScanRegExp hit to PS00442, Glutamine FT amidotransferases class-I active site." FT CDS complement(202303..203715) FT /transl_table=11 FT /locus_tag="DIP1562" FT /product="Putative transport membrane protein" FT /note="Similar to Streptomyces coelicolor putative FT transmembrane transport protein SC5G9.26c TR:Q9RL01 FT (EMBL:AL117385) (420 aa) fasta scores: E(): 8e-11, 28.37% FT id in 437 aa, and to Streptomyces lipmanii puromycin FT resistance protein Pur8 SW:PUR8_STRLP (P42670) (503 aa) FT fasta scores: E(): 2.4e-08, 24.39% id in 455 aa" FT /db_xref="GOA:Q6NGG0" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q6NGG0" FT /protein_id="CAE50087.1" FT /translation="MKTLEATSIQPAAPTQPWKVPGFTSTLIAVAAAFSAFSLMLPVIP FT LAVIASGQSDALAGATTATFMAITVLTQICTSRLIHAFGYRAVMIVAALLLGLPSLWYA FT VSLDPASVLIVAAIRGIGFGSLCVAQYALIGEIVPAGMLGKASGLLGVAVGASQMVALP FT AGLLLVNAGYSFDVVFFIGGGIALIAAFMAVAIPNVESDASSADAAGNDEAGVAIDDPA FT WRRAELKYERRQRIIHSKVVQKAKFAIPAKPRAKISARIHRRPRPHGLIVTVVPALALA FT SVSMGYGAVSSFLPASVRDIDPAHGAALAGIMLSIVGAAQMIFRFFAGMLADKLNRPGT FT TMIPGLILSALGLAGLVAVLALGWPLATLICAAILFGAGFGLVQNEALLEMFLRVPREK FT IGQASTIWNAAFDSGTGVGAIMLGMVAAHAGYAMAFAGGTVLVAIGFIAELTDRGVQRR FT HRARRVAASVAD" FT misc_feature complement(202318..203700) FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT misc_feature complement(order(202366..202422,202438..202503, FT 202567..202632,202645..202710,202732..202797, FT 202843..202908,203128..203193,203209..203274, FT 203314..203379,203395..203451,203473..203538, FT 203569..203634)) FT /note="12 probable transmembrane helices predicted for FT DIP1562 by TMHMM2.0" FT misc_feature complement(203560..203715) FT /note="Signal peptide predicted for DIP1562 by SignalP 2.0 FT HMM (Signal peptide probability 0.927) with cleavage site FT probability 0.298 between residues 52 and 53" FT CDS complement(203884..204099) FT /transl_table=11 FT /locus_tag="DIP1563" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NGF9" FT /protein_id="CAE50088.1" FT /translation="MTAIHTSVVAQSTIPPASFLLVYVLFLVSGLLVGGAWAAYKADNK FT FMVIVLGVLAAMAAAGGVVWAVGIYQ" FT misc_feature complement(order(203893..203958,203980..204045)) FT /note="2 probable transmembrane helices predicted for FT DIP1563 by TMHMM2.0" FT misc_feature complement(203986..204099) FT /note="Signal peptide predicted for DIP1563 by SignalP 2.0 FT HMM (Signal peptide probability 0.976) with cleavage site FT probability 0.957 between residues 38 and 39" FT CDS complement(204102..204710) FT /transl_table=11 FT /gene="hisB" FT /locus_tag="DIP1564" FT /product="imidazoleglycerol-phosphate dehydrogenase" FT /EC_number="4.2.1.19" FT /note="Similar to Corynebacterium glutamicum FT imidazoleglycerol-phosphate dehydrogenase HisB TR:Q9KJU3 FT (EMBL:AF160479) (205 aa) fasta scores: E(): 2e-49, 66.33% FT id in 199 aa, and to Streptomyces coelicolor FT imidazoleglycerol-phosphate dehydratase HisB or SC4G6.21c FT SW:HIS7_STRCO (P16247) (197 aa) fasta scores: E(): 1.1e-37, FT 53.03% id in 198 aa" FT /db_xref="GOA:P60884" FT /db_xref="InterPro:IPR000807" FT /db_xref="InterPro:IPR020565" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:P60884" FT /protein_id="CAE50089.1" FT /translation="MATQPRIGSISRVTSESDIRVEINLDGTGTVEIDTGVPFFDHMLT FT AFGVHGAFDLKVKATGDTHIDAHHTVEDTAIVLGQAIAQAVGDKRGIKRFGSFQLPMDE FT TLCEAIVDFSGRPYFVTKGEPDYLVHSVIGSHYPTVLNEHFFESLALNAKITLHVLCRY FT GRDPHHITEAEFKAVARAIREAVGPDDRLTGIPSTKGAL" FT misc_feature complement(204105..204683) FT /note="BlastProDom hit to PD002282, PD002282" FT misc_feature complement(204162..204608) FT /note="HMMPfam hit to PF00475, Imidazoleglycerol-phosphate FT dehydratase" FT misc_feature complement(204183..204221) FT /note="ScanRegExp hit to PS00955, FT Imidazoleglycerol-phosphate dehydratase signature 2." FT misc_feature complement(204477..204518) FT /note="ScanRegExp hit to PS00954, FT Imidazoleglycerol-phosphate dehydratase signature 1." FT CDS complement(204792..205892) FT /transl_table=11 FT /gene="hisC" FT /locus_tag="DIP1565" FT /product="histidinol-phosphate aminotransferase" FT /EC_number="2.6.1.9" FT /note="Similar to Corynebacterium glutamicum FT histidinol-phosphate aminotransferase HisC TR:Q9KJU4 FT (EMBL:AF160478) (366 aa) fasta scores: E(): 1.5e-99, 72.17% FT id in 363 aa, and to Streptomyces coelicolor FT histidinol-phosphate aminotransferase HisC or SC4G6.22c FT SW:HIS8_STRCO (P16246) (369 aa) fasta scores: E(): 3e-79, FT 57.85% id in 363 aa" FT /db_xref="GOA:P60999" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR005861" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/Swiss-Prot:P60999" FT /protein_id="CAE50090.1" FT /translation="MKDLTLNDLPIREELRGQSAYGAPQLDVDVRLNTNENPYPPSEAL FT VEELARVVAEQASNLNRYPERDAVELRTELARYITKCTGVPVTYEQLWAANGSNEVLQQ FT LLQAFGGPGRTVLGFQPSYSMHPILAQGTQTTFINCPRDKEFRIDVDAALAAITTHQPN FT IVFVTTPNNPTGDVTSLDTIKKILDVAPGIVIVDEAYAEFSEQPSAISLLENYPTKLVV FT SRTMSKAFDFAGGRLGYFVAHKAFIDAVMLVRLPYHLSQLSQAAAIVALRHSEETLATV FT AKLVAERKRVQQGLLELGFEIVPSESNFLFFGHFEDQHAAWQAFLDRKVLIRDVSVSGY FT LRATVGLPEENDAFLNAAREVAQQFL" FT misc_feature complement(204807..205673) FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II" FT CDS complement(205931..207280) FT /transl_table=11 FT /gene="hisD" FT /locus_tag="DIP1566" FT /product="histidinol dehydrogenase" FT /EC_number="1.1.1.23" FT /note="Similar to Mycobacterium smegmatis histidinol FT dehydrogenase HisD SW:HISX_MYCSM (P28736) (445 aa) fasta FT scores: E(): 1.2e-100, 62.81% id in 441 aa, and to FT Streptomyces coelicolor histidinol dehydrogenase HisD or FT SC4G6.23c SW:HISX_STRCO (P16245) (441 aa) fasta scores: FT E(): 5.6e-86, 56.23% id in 441 aa" FT /db_xref=" |