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EBI DbfetchID BX248357; SV 1; linear; genomic DNA; STD; PRO; 349535 BP. XX AC BX248357; XX DT 06-NOV-2003 (Rel. 77, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 4/8 XX KW complete genome. XX OS Corynebacterium diphtheriae OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Corynebacteriaceae; Corynebacterium. XX RN [1] RP 1-349535 RX DOI; 10.1093/nar/gkg874 RX PUBMED; 14602910. RA Cerdeno-Tarraga A.M., Efstratiou A., Dover L.G., Holden M.T.G., Pallen M., RA Bentley S.D., Besra G.S., Churcher C., James K.D., De Zoysa A., RA Chillingworth T., Cronin A., Dowd L., Feltwell T., Hamlin N., Holroyd S., RA Jagels K., Moule S., Quail M.A., Rabbinowitsch E., Rutherford K., RA Thomson N.R., Unwin L., Whitehead S., Barrell B.G.Parkhill.J.; RT "The complete genome sequence and analysis of Corynebacterium diphtheriae RT NCTC13129"; RL Nucleic Acids Res. 31(22):6516-6523(2003). XX RN [2] RP 1-349535 RA Cerdeno-Tarraga A.M.; RT ; RL Submitted (03-OCT-2003) to the EMBL/GenBank/DDBJ databases. RL Cerdeno-Tarraga A.M., submitted on behalf of the Pathogen Sequencing Unit, RL Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA RL E-mail: amct@sanger.ac.uk XX DR EMBL-CON; BX248353. DR RFAM; RF01118; PK-G12rRNA. DR SILVA-LSU; BX248357. DR SILVA-SSU; BX248357. XX FH Key Location/Qualifiers FH FT source 1..349535 FT /organism="Corynebacterium diphtheriae" FT /strain="NCTC13129" FT /mol_type="genomic DNA" FT /note="biotype gravis" FT /db_xref="taxon:1717" FT CDS 76..402 FT /transl_table=11 FT /locus_tag="DIP1058" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 11.0 kDa protein Rv1898 or MT1949 or MTCY180.20c FT SW:YI98_MYCTU (O07734) (102 aa) fasta scores: E(): 5.8e-16, FT 56.43% id in 101 aa, and to Aquifex aeolicus hypothetical FT 17.9 kDa protein AQ_2067 TR:O67847 (EMBL:AE000771) (157 aa) FT fasta scores: E(): 4.7e-08, 40.19% id in 102 aa" FT /db_xref="InterPro:IPR002767" FT /db_xref="UniProtKB/TrEMBL:Q6NHS3" FT /protein_id="CAE49578.1" FT /translation="MLIDMILAFSVAPTETPNNKAEMADVVAEAIRVVRESGLPNETNA FT MFTLIEGEWDEVMAVVKKATDAVLAVSPRASLVIKADIRPGYTGQLQQKVASVERVLAG FT DSES" FT misc_feature 88..372 FT /note="HMMPfam hit to PF01910, Protein of unknown function FT DUF77" FT CDS complement(405..1226) FT /transl_table=11 FT /locus_tag="DIP1059" FT /product="Putative iron-siderophore uptake system FT ATP-binding component" FT /note="Similar to Streptomyces coelicolor putative FT iron-siderophore uptake system ATP-binding component FT SCI51.25C TR:Q9S215 (EMBL:AL109848) (301 aa) fasta scores: FT E(): 1.9e-42, 50.58% id in 255 aa, and to Escherichia coli FT ferric enterobactin transport ATP-binding protein fepC FT b0588 SW:FEPC_ECOLI (P23878) (271 aa) fasta scores: E(): FT 1.1e-41, 49.61% id in 262 aa" FT /db_xref="GOA:Q6NHS2" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NHS2" FT /protein_id="CAE49580.1" FT /translation="MTSTSPILRTDSVTLAWDKHTVSTDLTVEVPQGQFTAIIGPNGCG FT KSTLLKSFARILQPHTGQVYLGDNPLDSLHTKYIAQRIALLPQTALAPADITVEELVGR FT GRFPYQTLLRQWSTKDAQAVDSALLATGTAQLRHRRVTELSGGQRQRVWLAMVLAQNTP FT VVLLDEPTTYLDVAHQYQLLELARALRQQLGRTIVTVLHDLQQAVRYADHLIVMKGGAV FT YAEGAPSSIMTPQLISEVFDINVDVHTIDDHVVIVPKTMPQPDVSVLENLQ" FT misc_feature complement(405..4762) FT /note="Putative iron uptake system. Low GC content FT (58.02%)" FT misc_feature complement(564..1133) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(567..1130) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(579..797) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(753..797) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(1047..1124) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(1086..1109) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1223..2182) FT /transl_table=11 FT /locus_tag="DIP1060" FT /product="Putative iron-siderophore uptake system FT transmembrane component" FT /note="Similar to Streptomyces coelicolor putative FT iron-siderophore uptake system transmembrane component FT sci51.26C TR:Q9S214 (EMBL:AL109848) (375 aa) fasta scores: FT E(): 5e-40, 40.74% id in 324 aa, and to Escherichia coli FT ferric enterobactin transport system permease protein fepg FT fepg or B0589 SW:FEPG_ECOLI (P23877) (330 aa) fasta scores: FT E(): 1.8e-45, 44.09% id in 322 aa" FT /db_xref="GOA:Q6NHS1" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:Q6NHS1" FT /protein_id="CAE49582.1" FT /translation="MRALVILSSLLLVTAAYSLVIPGAGLSTWQLLTSETPLAHTVVMQ FT WRLPRVVTGILVGAALAIAGSLFQSLTRNPLGSPDIIGFSTGAYTGVIAAFLLGWSGFG FT ATIVGALIGGLAVSVVVIALSVRTRIDGLRIILVGLGISAMLSALNRWLITRGELDTAL FT SAASWGAGSLNGLRWTIAIPACCVLAILITTTIPLRRFLDVLSLGDDLAVGLGLRLQLT FT KLLLLVGGVFLVAATTAVAGPIAFVALASPHIARALTSSARTPLVETSVIGALLIIVAD FT LIGQRLFYPTQLPVGLVTVTIGGMYLLWLIARGSKENS" FT misc_feature complement(1244..2116) FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature complement(order(1247..1303,1319..1384,1445..1510, FT 1607..1657,1718..1783,1805..1870,1883..1939,1979..2044, FT 2105..2161)) FT /note="9 probable transmembrane helices predicted for FT DIP1060 by TMHMM2.0" FT misc_feature complement(1250..1564) FT /note="BlastProDom hit to PD001557, PD001557" FT misc_feature complement(2108..2182) FT /note="Signal peptide predicted for DIP1060 by SignalP 2.0 FT HMM (Signal peptide probability 0.966) with cleavage site FT probability 0.180 between residues 25 and 26" FT CDS complement(2184..3191) FT /transl_table=11 FT /locus_tag="DIP1061" FT /product="Putative iron-siderophore uptake system FT transmembrane component" FT /note="Similar to Streptomyces coelicolor putative FT iron-siderophore uptake system transmembrane component FT sci51.27C TR:Q9S213 (EMBL:AL109848) (348 aa) fasta scores: FT E(): 8e-36, 36.53% id in 323 aa, and to Escherichia coli FT ferric enterobactin transport system permease protein fepD FT or B0590 SW:FEPD_ECOLI (P23876) (334 aa) fasta scores: E(): FT 5.2e-40, 40.37% id in 322 aa" FT /db_xref="GOA:Q6NHS0" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:Q6NHS0" FT /protein_id="CAE49584.1" FT /translation="MLRQPRVRLPLPLVITFLVIILLCTIIMSLGVGARNITSPDILAA FT LRHYGDPTNSHIIWGRRIPRTLIAIAAGASLSLAGVLIQALTRNPLADTGVFGINAGAA FT FTIVIGIALAGSLSHISIFALALLGAILAGACVYALSMNSCKGSDPLRLVLAGVALSAI FT LTGIGDGLSLVNPQAFDRLKSWMVGNIDAGSYQPAAVAGVGLILGILVTATCMRQLNAL FT SLGDELAITMGASIAKTRLFTFIAIVVLAASATAAAGVITFLGLMVPHIARWIVGPNLL FT RLVATASLIGPIIVLSADILGRIIVPGEFPAGVVVAFIGAPFLIAYAQTKRKEI" FT misc_feature complement(2199..2525) FT /note="BlastProDom hit to PD001557, PD001557" FT misc_feature complement(2205..3095) FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature complement(order(2211..2276,2289..2354,2394..2459, FT 2544..2609,2670..2735,2766..2831,2838..2903,2934..2990, FT 3096..3161)) FT /note="9 probable transmembrane helices predicted for FT DIP1061 by TMHMM2.0" FT misc_feature complement(3090..3191) FT /note="Signal peptide predicted for DIP1061 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.663 between residues 34 and 35" FT CDS 3239..4282 FT /transl_table=11 FT /locus_tag="DIP1062" FT /product="Putative iron-siderophore uptake system exported FT solute-binding component" FT /note="Similar to Escherichia coli iron(III) FT dicitrate-binding periplasmic protein precursor FecB or FT B4290 SW:FECB_ECOLI (P15028) (300 aa) fasta scores: E(): FT 1.1e-12, 25.55% id in 270 aa, and to Campylobacter jejuni FT enterochelin uptake periplasmic binding protein CeuE or FT CJ1355 TR:Q9PMU4 (EMBL:AL139078) (330 aa) fasta scores: FT E(): 3e-12, 28.35% id in 328 aa, and to Vibrio anguillarum FT ferric anguibactin-binding protein precursor FatB FT SW:FATB_VIBAN (P11460) (322 aa) fasta scores: E(): 1.5e-09, FT 28.72% id in 289 aa" FT /db_xref="GOA:Q6NHR9" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:Q6NHR9" FT /protein_id="CAE49585.1" FT /translation="MFEISRSRAKAMRPFLALATATVMMLSLAACSSSDNSSTNAQGNT FT DVAVGGQRFSTADQETAKLGSDAQPGQFPRTVVHAAGTTEITTKPERVVVLDTGELDSV FT LSLGITPVGMTTTKGANPVPSYLADKVKDVERVGTINELNIEAIAALKPDLIIGSQLRA FT DKLYPQLSDIAPTVFSIRPGSPWKENFLLVGEALGMEKEAEEKLNEYADRVAELKNNVP FT QNTEVSLVRFMPNKLRLYGNKSLIGVVLADAGLARPEKQNVDDLAVEISPENIDQAAGS FT VIFYTSYGKPDATGETAVVEGPAWKNLEAVAAGKAHRVNDDVWFLGLGPTGAMEIVSDL FT HDYLLKK" FT misc_feature 3239..3367 FT /note="Signal peptide predicted for DIP1062 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.358 between residues 43 and 44" FT misc_feature 3506..4207 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein" FT CDS complement(4379..4762) FT /transl_table=11 FT /locus_tag="DIP1063" FT /product="Putative integral membrane protein" FT /note="Weakly similar to Streptomyces coelicolor putative FT membrane protein SCL2.30c TR:Q9L269 (EMBL:AL137778) (150 FT aa) fasta scores: E(): 0.12, 28.3% id in 106 aa" FT /db_xref="InterPro:IPR019099" FT /db_xref="UniProtKB/TrEMBL:Q6NHR8" FT /protein_id="CAE49586.1" FT /translation="MEEKVHNLMNKMQDRHLHMKAAWYGPVLSPLLLVAGMCLLIFGII FT ILPTPAPGWLCIFIALGILSLVHPPTRRLTIWLASKLDIFFAWYGQRHPAVRTSLVGLL FT ILFMVLVMGGTYLFIAPAHWPSI" FT misc_feature complement(order(4397..4462,4559..4609,4625..4699)) FT /note="3 probable transmembrane helices predicted for FT DIP1063 by TMHMM2.0" FT CDS 4915..5811 FT /transl_table=11 FT /locus_tag="DIP1064" FT /product="Putative thioredoxin-like protein" FT /note="Similar to Mycobacterium leprae TrxA SWALL:Q49716 FT (EMBL:U00014) (255 aa) fasta scores: E(): 7.3e-18, 37.22% FT id in 223 aa, and to Streptomyces coelicolor putative FT thioredoxin SC8F4.23 TR:Q9L2A3 (EMBL:AL137242) (318 aa) FT fasta scores: E(): 6.6e-10, 34.06% id in 320 aa, and to FT Corynebacterium nephridii thioredoxin C-1 SW:THI1_CORNE FT (P00275) (105 aa) fasta scores: E(): 0.11, 25.96% id in 104 FT aa" FT /db_xref="GOA:Q6NHR7" FT /db_xref="InterPro:IPR013766" FT /db_xref="UniProtKB/TrEMBL:Q6NHR7" FT /protein_id="CAE49587.1" FT /translation="MTTPNRFVAGAIDLGEVKARAEARSQAQRAGQSSVTEVEPTVTIT FT MDNVEEQLIKRSMQVPVVVLIGTPRSPDSEQLRADLSQIASGASLSFIFAYIDADATPQ FT VAQMFGIQGLPTVVALAQGQPLANFEGGQPMEALQQWTAAVVKAVEGKLPGITGDDAEA FT EPAEDPRFEPATEALNAGDFDAAIAVYEEILRHEPKNQMALQARDNARLLSRLKDADRS FT VDPIAVADADLQDVDKAFAAADAEITTGKVEEAFDRLIELLPNEKVRTRLLELYSVFEP FT SDSRVQAARSKMASKLF" FT misc_feature 5032..5346 FT /note="ProfileScan hit to PS50223, Thioredoxin-domain (does FT not find all)." FT misc_feature 5413..5514 FT /note="ProfileScan hit to PS50005, TPR repeat." FT repeat_region 5815..6067 FT /note="repX" FT CDS complement(6216..8414) FT /transl_table=11 FT /gene="glgB" FT /locus_tag="DIP1065" FT /product="1,4-alpha-glucan branching enzyme" FT /EC_number="2.4.1.18" FT /note="Similar to Escherichia coli 1,4-alpha-glucan FT branching enzyme GlgB or B3432 SW:GLGB_ECOLI (P07762) (728 FT aa) fasta scores: E(): 5.3e-126, 44.81% id in 723 aa, and FT to Mycobacterium tuberculosis probable 1,4-alpha-glucan FT branching enzyme GlgB or Rv1326c or MT1368 or MTCY130.11c FT SW:GLGB_MYCTU (Q10625) (731 aa) fasta scores: E(): 5e-179, FT 59.52% id in 719 aa" FT /db_xref="GOA:Q6NHR6" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHR6" FT /protein_id="CAE49588.1" FT /translation="MVSPTQITPVHPDVLHALKICQYHDPHGVYGWHEVDAERAVIRTR FT HIGAERVETLLSDSTVVELAAVGDDIFEAIVDHDASCDYRLRIHWQGGQVTEQADAYHF FT LPTLGDLDLHLINEGRHERLWEVLGANPTTITTAMGDVEGTAFAVWAPNASGVAVIGDF FT CGWNPSQYPMRSLGSTGIWELFIPNIGVGTVYKFAIHTHEGHRLDKADPMAKRAEVAPA FT TGSIIASSSYTWNDDTWMTNRAHTDHDNTAMSVYEVHLGSWSQGQNYEELATNLVDYVK FT EMGYTHVEFLPVAEHPFGGSWGYQVSGYYAPTSRWGTPDQLRLLIDAFHQAGIGVIVDW FT VPAHFPKDAFALGRFDGQALYEHPDWRRGEQKDWGTYVFDFGRNEVRNFLVANALYWLE FT EFHVDGLRVDAVASMLYLDYSREPGEWLPNIYGGRENLEAVQFLQEMNATVHKSHPGVM FT TIAEESTSWPGVTSPTWEGGLGFSMKWNMGWMNDTLEYFSHEPIHRMYHHNDITFSMVY FT AYSEKFVLPFSHDEVVHGKGSLWTRMPGDAWNKAAGLRTLYAYMYAHPGKNLLFQGQEF FT GQVKEWSEERSLDWGDMDGWEGEYHRGIRTLVQDLNALYKDSPALYSQDNNPAGFSWTK FT SDDAANNILSFVRYGADGSKILAVFNFGGADHPSYKLGVPEGGNWKCILNTDAGIYEGE FT DNYLDSDVMAWDTDWDGYQHSLTVHIPAMSGQLYRWEA" FT misc_feature complement(6624..7649) FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain" FT misc_feature complement(7752..8042) FT /note="HMMPfam hit to PF02922, Isoamylase N-terminal FT domain" FT CDS complement(8469..10505) FT /transl_table=11 FT /locus_tag="DIP1066" FT /product="Putative alpha-amylase (glucanase)" FT /EC_number="3.2.1.1" FT /note="Similar to Mycobacterium smegmatis putative FT glucanase GlgE TR:Q9RP48 (EMBL:AF172946) (697 aa) fasta FT scores: E(): 2.1e-155, 58.52% id in 692 aa, and to FT Streptomyces coelicolor putative alpha-amylase Pep1A FT TR:Q9L1K2 (EMBL:AL138978) (675 aa) fasta scores: E(): FT 5.1e-126, 50% id in 662 aa, and to Dictyoglomus FT thermophilum alpha-amylase 3 AmyC SW:AMY3_DICTH (P14899) FT (498 aa) fasta scores: E(): 0.17, 23.84% id in 453 aa" FT /db_xref="GOA:Q6NHR5" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q6NHR5" FT /protein_id="CAE49589.1" FT /translation="MSSKSTRLAIEDVRPQVSCGRRPSKAVVGEMIPVSALVWREGHDA FT IAATLVVTDPTGQSSSIAMATKKFEPDRMWASFVPDRPGTWTFRVDAWSDAVATWRHAV FT TTKIEAGQSPEELYNDIEHGVALFESAIASAPKAERKTLAPAFTRVINALRSDAPLRTR FT VAPALSAEITYLLAEHPVRELLTRGHTYSISVERTKALYSSWYELFPRSTGGWDDNGQP FT VHGTFVTTAQALDRVAAMGFDTVYFPPIHPIGEINRKGKNNTLIALPGDVGSPWAIGSA FT EGGHDSVHPRLGTIDDFRALIARARELNLEVALDLALQAAPDHPWAKSHPEFFTVLADG FT SIAFAENPPKKYQDIYPLNFDNAHKKIYAEILRVVLFWVQQGVTTFRVDNPHTKPANFW FT EWLIAKVHAKHPEVIFLAEAFTRPARLYGLGKVGFSQSYTYFTWKTSKTQLQQFAEEIA FT EMADVSRPNLFVNTPDILHESLQYGGRAMFAIRATLAATMSPVWGVYSGFELFEHEAVA FT HGSEEYANSEKYELRPRNFDTARAAGNSLEPYLTLLNSIRAQHPALQQLRVIDFHPTDN FT DSILAYSKVDPVTGDTIVVVVNLDPDHAQQATLELDMEALGRDTTESFDVTDLVSGQQF FT HWGQRNFIRLDPCANVAHIVAIPPAPNSRKAQLSWRGESDYRN" FT misc_feature complement(8835..9884) FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain" FT CDS 10600..11469 FT /transl_table=11 FT /locus_tag="DIP1067" FT /product="Putative ABC transport system, ATP-binding FT protein" FT /note="Similar to Mycobacterium tuberculosis ABC FT transporter ATP-binding protein Rv3041c or MTV012.56c FT TR:O53288 (EMBL:AL021287) (287 aa) fasta scores: E(): FT 3.2e-63, 62.95% id in 278 aa, and to Streptomyces FT coelicolor putative ABC transporter ATP-binding subunit FT SCI5.06c TR:Q9X9Z4 (EMBL:AL079332) (265 aa) fasta scores: FT E(): 1e-41, 49.41% id in 257 aa" FT /db_xref="GOA:Q6NHR4" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NHR4" FT /protein_id="CAE49590.1" FT /translation="MHSEKSVMMEPMTNPKNDPRNPDLLLDFEEVEFTRGGKTLVGPIT FT WQVELDERWVILGPNGAGKTTLIRMAAAEEFPSKGALWIMGERIGKTDMRDLRAMIGVS FT SSALGNRIPTNEKVLDLVISAGYAILGRWREEYDKWDHDRAIEILEQVGAYHLADQTWG FT TLSEGERKRVLVARALMTNPELLLLDEPTAGMDLGGREDLVGYLAQLAMDPDAPAMVMI FT THHVEEIPAGFTHALLLDEGEVVSQGLIDEVLTSANLTKAFHQPIKVDKIDGRYFARRQ FT RTARSHRR" FT misc_feature 10747..11346 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 10750..11325 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 10756..10809 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 10771..10794 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 11092..11286 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 11548..12357 FT /transl_table=11 FT /locus_tag="DIP1068" FT /product="Putative NUDIX/MutT-family hydrolase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 31.5 kDa protein Rv3040c or MTV012.55c TR:O53287 FT (EMBL:AL021287) (288 aa) fasta scores: E(): 4.1e-25, 37.2% FT id in 258 aa, and to uncultured proteobacterium EBAC31A08 FT predicted MutT superfamily hydrolase TR:Q9F7R7 FT (EMBL:AF279106) (264 aa) fasta scores: E(): 8.4e-18, 31.79% FT id in 239 aa" FT /db_xref="GOA:Q6NHR3" FT /db_xref="InterPro:IPR000086" FT /db_xref="UniProtKB/TrEMBL:Q6NHR3" FT /protein_id="CAE49591.1" FT /translation="MSTPVDLTEGLDGAKLAVTVLMIRDSPTGLEVYVQERVSSMPTFP FT NATVFPGGGVDPRDFELDGVESEHETFGGPSLMHWARSLGTNRNRARALLFAAARELFE FT ETGTLLATHSDGTPIPDATQYHPQRLALESHRLSLSQVLARHDLTLRSEWLRPSTRWVS FT PETDEKRFDMFAFVAVQPPGQEPDGNTREAASTGWFSPSLILDGWRAGLIRLVIPTWAQ FT LLILSRFDCVRDVLEFLRRADMTPIIGDPVDDPRFEEFYSFTPPERF" FT misc_feature 11587..12216 FT /note="HMMPfam hit to PF00293, MutT-like domain" FT CDS 12402..13586 FT /transl_table=11 FT /locus_tag="DIP1069" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 39.1 kDa protein Rv3037c or MTV012.52C TR:O53284 FT (EMBL:AL021287) (358 aa) fasta scores: E(): 3.1e-43, 42.49% FT id in 353 aa, and to Streptomyces coelicolor Sc6g4.36C FT protein sc6g4.36C TR:O86799 (EMBL:AL031317) (426 aa) fasta FT scores: E(): 2.5e-18, 31.36% id in 322 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHR2" FT /protein_id="CAE49592.1" FT /translation="MSYTTDEVHFLLDLDAEITAVAGAITRDHAMTKATAVKDAATFHK FT HFGANGRAAMELCASRTSAQGKLPHDWLMCHDSSQQATPLTVAQQRAHRIHRVCGSEAI FT VHDVTCSIGTEGAAITDLGMAYHGSDLDMSRLLMARHNVPTGLFFQADALKRASTSSDV FT IIADPARRAEGRRITKPDQLIPPLPQLVDHWRIATTTAAPMAIKCAPGLDFQEWDGLVS FT VVSVAGGVKEACLYTPELSEGLTREAIMIGPDQSVDVLNDRHGGEVPAGDPGTFIIDPD FT GAVVRAGLVQHYAAREQLWMLDEHIAYLTGDRIPQGRSGFRFIEMVGLKQLKSALVAHD FT AGSLEILVRGVDVDPDQLRKKLKLKGNTPMAVICTRIGRKGVALICHAREHSQT" FT CDS 13762..14556 FT /transl_table=11 FT /gene="etfB" FT /gene_synonym="fixA" FT /locus_tag="DIP1070" FT /product="Electron transfer flavoprotein beta-subunit" FT /note="Similar to Mycobacterium tuberculosis electron FT transfer flavoprotein beta-subunit FixA or Rv3029c or FT MT3113 or MTV012.44c SW:ETFB_MYCTU (O53276) (266 aa) fasta FT scores: E(): 8.4e-45, 51.31% id in 267 aa" FT /db_xref="GOA:Q6NHR1" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:Q6NHR1" FT /protein_id="CAE49593.1" FT /translation="MPAIVALVKNVPDTWSVKKLEADYTLDRTNVDSVIDEINEYAVEQ FT ALRLRDDNPDAGYEVVALSLGPTNAEEALRKALAMGADRAVLLSDDSLAGSDVLGTAWA FT LHNAINQIPDVAMVVTGSASSDGSMGVVPGILSEYRQQPALTHLRSVAIVDGVVKGIRE FT THDGDFAVEAPLPAIISVTEKADKPRFPNFKGIMAAKKAEITRMALSSIGVAPEQVGLA FT HAATVVTAATERPVRVAGEVINTSSAEAAAKIADFLAAEKLI" FT misc_feature 13771..14523 FT /note="HMMPfam hit to PF01012, Electron transfer FT flavoprotein beta subunit" FT misc_feature 13771..14553 FT /note="BlastProDom hit to PD003528, PD003528" FT CDS 14574..15527 FT /transl_table=11 FT /gene="etfA" FT /gene_synonym="fixB" FT /locus_tag="DIP1071" FT /product="Electron transfer flavoprotein alpha-subunit" FT /note="Similar to Mycobacterium tuberculosis electron FT transfer flavoprotein alpha-subunit EtfA or FixB or Rv3028c FT or MT3112 or MTV012.43c SW:ETFA_MYCTU (O53275) (318 aa) FT fasta scores: E(): 1.8e-48, 51.1% id in 317 aa" FT /db_xref="GOA:Q6NHR0" FT /db_xref="InterPro:IPR014731" FT /db_xref="UniProtKB/TrEMBL:Q6NHR0" FT /protein_id="CAE49594.1" FT /translation="MSTVYVLVEHANGQVLPATGELITAARPLGDVTAVVVGTPGSHEA FT LVSQIAEYSATAIVAAQVADADSRVVIPQADALSMLAAAQPGPILLDSGAHGNEIAGRL FT AARLASGVLCNVVGVNADRTAVMSIFGDTVDVSAAVGGASPIYTLRPGAVEAVPAPSQP FT AVSVMDIPATGVKDVKVSSFTPAAQGDRPDLSTAKVVIAGGRGVESAENFTTIVEPLAD FT ALNGAVGATRDAVDLGYYPAQYQVGQTGVTVSPDLYIGLGISGAIQHTSGMQTSKKIVV FT INNDADAPFFQIADLGVVGDIHEIAPLLVKEIAQRS" FT misc_feature 14577..15404 FT /note="HMMPfam hit to PF00766, Electron transfer FT flavoprotein alpha subunit" FT misc_feature 14619..14636 FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT CDS 15987..17123 FT /transl_table=11 FT /locus_tag="DIP1072" FT /product="Putative aminotransferase, class V" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT aminotransferase, class V MT3109 TR:AAK47439 FT (EMBL:AE007129) (393 aa) fasta scores: E(): 1.1e-52, 45.71% FT id in 385 aa, and to Mycobacterium tuberculosis NifS-like FT protein Rv3025c or MTV012.40C TR:O53272 (EMBL:AL021287) FT (393 aa) fasta scores: E(): 1.1e-52, 45.71% id in 385 aa, FT and to Ruminococcus flavefaciens cysteine desulfurase IscS FT or NifS SW:ISCS_RUMFL (O54055) (396 aa) fasta scores: E(): FT 2.1e-40, 36.48% id in 381 aa" FT /db_xref="GOA:Q6NHQ9" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q6NHQ9" FT /protein_id="CAE49595.1" FT /translation="MQTRYFDHAATTPIRETARAAWLEYAGMANPASQYASGRAARSVL FT DTAREQISQLLGCEPIEVIFTASGTESDNIGVHGLWKSRQGQAPNRIVTTAIEHPGVLE FT TVKALEAHGANLDFLPVDSHGAIANVDALSTPAAVAAVMWANNETGAIQPIEKVIAAAK FT EVDTPVHVDAVQVVGHQHINFDVLGATTLAASAHKFGGPRGVGLLLARRSPAPQPVMFG FT GGQERSIRSGTVDVAGAAATAAALAEAVNEVDEETTRLRYLVNKLRDHVVATIDNTVVH FT TPRHSLPGHLHLSFPGAEGDSLIMLLDSLGLEASTGSACSNGVNRASHVLLAMGVSEST FT ARSTVRFTLGATTTEEDVDTLIAQLPDVVARARLAGMA" FT misc_feature 16017..17069 FT /note="HMMPfam hit to PF00266, Aminotransferase class-V" FT CDS complement(17120..17968) FT /transl_table=11 FT /locus_tag="DIP1073" FT /product="Putative transferase" FT /note="Similar to Streptomyces coelicolor hypothetical 30.6 FT kDa protein 2scc13.11C TR:Q9F3H8 (EMBL:AL442165) (289 aa) FT fasta scores: E(): 5.6e-28, 36.2% id in 279 aa, and to FT Neisseria meningitidis (serogroup A), and putative FT transferase nma1087 or nmb0869 TR:Q9JQL8 (EMBL:AL162755) FT (263 aa) fasta scores: E(): 1.6e-09, 26.42% id in 246 aa, FT and to Escherichia coli spermidine synthase spee or B0121 FT SW:SPEE_ECOLI (P09158) (287 aa) fasta scores: E(): 0.0013, FT 28.28% id in 152 aa" FT /db_xref="GOA:Q6NHQ8" FT /db_xref="UniProtKB/TrEMBL:Q6NHQ8" FT /protein_id="CAE49596.1" FT /translation="MGRKSKNSSQSHAHGPVPGVYPTTTGEVELRADSFLPHAFEVYVN FT GVPSSHIAQDPEQLEYEYMRWIAAIVDWFVTTHSDPKKLRVTHLGGGACTLARYVCHRY FT PNARNTVVELDATLATLVREWFDLPRSPQLKIRVGDAWEVAQTFVPSSRDVIIRDVFAG FT NQTPRRLTTVEFFQQCHQALSPGGLYVANCGDHRDLNVAKAEVQGLREVFDHVACIADP FT TMLKGRRYGNIILIATDTQLPTDQEQQVLTRLLLGGGVPAQFKGGNWTKNFSSSSTARH FT D" FT misc_feature complement(17387..17734) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT CDS 18125..19225 FT /transl_table=11 FT /gene="trmU" FT /locus_tag="DIP1074" FT /product="probable tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase" FT /EC_number="2.1.1.61" FT /note="Similar to Mycobacterium tuberculosis probable tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase FT TrmU or Rv3024c or MT3108 or MTV012.39c SW:TRMU_MYCTU FT (O53271) (367 aa) fasta scores: E(): 1.8e-80, 60.94% id in FT 361 aa, and to Escherichia coli tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase FT TrmU or AsuE or MnmA or B1133 SW:TRMU_ECOLI (P25745) (368 FT aa) fasta scores: E(): 1.1e-39, 37.15% id in 366 aa" FT /db_xref="GOA:Q6NHQ7" FT /db_xref="InterPro:IPR018318" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHQ7" FT /protein_id="CAE49597.1" FT /translation="MRVLAAMSGGVDSAVAAARAVAAGHDVVGVHLALSQDPQTVRESS FT RGCCSLEDSADARRVCDKLGIPFYVWDFSDRFKEDVIDDFISSYEAGETPNPCLRCNEK FT IKFAALLERGIALGFDAVVTGHYARLTQPVDGGDGYLRRSIDPDKDQSYVLGVLGAHEI FT AHCMFPVGDTVKPKIREEAAAMGFSVAKKPDSYDICFIPDGNTQAFLGRHIGLRPGMIV FT DSDGNELKEHDGAWNYTIGQRKGLDIKQPAADGKPRYVTNIDAATGTVTVGSRENLKVI FT ALTADRLKYLHPAMTGSFEAEVQVRAHGSVVACSVMVNESDDTMRVELHTPLSGVARGQ FT AAVIYLPDDDGDIVLGSGTICATEHQ" FT misc_feature 18125..18190 FT /note="Signal peptide predicted for DIP1074 by SignalP 2.0 FT HMM (Signal peptide probability 0.868) with cleavage site FT probability 0.374 between residues 22 and 23" FT misc_feature 18125..19204 FT /note="HMMPfam hit to PF03054, tRNA methyl transferase" FT misc_feature 18596..18625 FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT CDS 19254..20321 FT /transl_table=11 FT /locus_tag="DIP1075" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML1706 TR:Q9CBR6 (EMBL:AL583923) (337 aa) fasta scores: FT E(): 4.5e-19, 32.26% id in 313 aa, and to Mycobacterium FT tuberculosis CDC1551 vitamin-b12 independent methionine FT synthase family protein MT3095 TR:AAK47424 (EMBL:AE007129) FT (337 aa) fasta scores: E(): 1.4e-18, 31.94% id in 313 aa, FT and to Mycobacterium tuberculosis hypothetical 34.2 kDa FT protein Rv3015c or MTV012.29C TR:O53262 (EMBL:AL021287) FT (337 aa) fasta scores: E(): 1.4e-18, 31.94% id in 313 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHQ6" FT /protein_id="CAE49598.1" FT /translation="MTESVGFLESVACALGPMPGLDLYQAADVIVGETGDCMALPELVQ FT RGVTDQLVGRTCALLPELPVEKGPRSWRLSVRPQIATRRLWDGIERDLDDLEQQWGNAP FT IIKTRLMGPWSLATRIELANGHRAVTDRGAVRDIAAIMAEAIDDHCGDLRRRFGAQVVV FT QLHEPDAVALMHGTVPGTTDFDVIRAVHVKDLVEVLAPLVSSVQSHEHSAVVFSAISAA FT AVPQSESTAAAIELMRQSGATSMVINPHDLCGTKTLDACGNALSSGVGAIWALPAPGLS FT TPTPVGELVEDPERHAAIQLAKLIDEMGLDRSVLETSSVTQQLFTLPSTILDAARHLQH FT IVRVRTMLREDAGDL" FT CDS complement(20365..21069) FT /transl_table=11 FT /locus_tag="DIP1076" FT /product="Putative DNA polymerase" FT /note="Similar to Streptomyces coelicolor putative DNA FT polymerase SCBAC1A6.08 TR:Q9ADH9 (EMBL:AL589708) (244 aa) FT fasta scores: E(): 2.6e-12, 42.06% id in 233 aa, and to FT Rhodobacter capsulatus DNA polymerase III epsilon FT chain-like protein DnaQ SW:DP3E_RHOCA (O68045) (704 aa) FT fasta scores: E(): 0.0033, 31.7% id in 164 aa" FT /db_xref="GOA:Q6NHQ5" FT /db_xref="InterPro:IPR013520" FT /db_xref="UniProtKB/TrEMBL:Q6NHQ5" FT /protein_id="CAE49599.1" FT /translation="MNNIAAPDQSFNPAHVLSFDLETTSANPFEARIVTSALVRIDSSG FT AHPVELLADPGVEIPEAASKVHGISTEYAREHGEPHEAVLKRTVDEIYAAWEEGFTLVV FT YNAPYDLTVLRQLTGDFVVKGPVYDPYLIDRIMDRFRKGKRTLTDLCSVYGVRMDNAHE FT ATSDALAAARIAWMQAKKRFKDDLAAYSHDELMEYQAVQYYELQKDMKKYLDGLGRDTS FT TVNFGWPMQNSR" FT misc_feature complement(20518..21027) FT /note="HMMSmart hit to SM00479, No definition" FT misc_feature complement(20521..21024) FT /note="HMMPfam hit to PF00929, Exonuclease" FT CDS 21166..23199 FT /transl_table=11 FT /gene="ligA" FT /gene_synonym="lig" FT /locus_tag="DIP1077" FT /product="DNA ligase" FT /EC_number="6.5.1.2" FT /note="Similar to Mycobacterium tuberculosis DNA ligase FT LigA or Lig or Rv3014c or MT3094 or MTV012.28c FT SW:DNLJ_MYCTU (O53261) (691 aa) fasta scores: E(): FT 4.7e-155, 60.86% id in 672 aa, and to Escherichia coli DNA FT ligase LigA or Lig or DnaL or PdeC or Lop or B2411 FT SW:DNLJ_ECOLI (P15042) (671 aa) fasta scores: E(): 4.4e-92, FT 41.58% id in 683 aa" FT /db_xref="GOA:Q6NHQ4" FT /db_xref="HSSP:1B04" FT /db_xref="InterPro:IPR013840" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHQ4" FT /protein_id="CAE49600.1" FT /translation="MTDNFADLRRQWDDLAEQVRHHRDAYYNHTPEISDAEFDQLFRQL FT QQLEQEHPELAVPESPTLRVGAPVEQSSFDNVEHLERMLSLDNVFDAAELDDWLQRTPS FT ATYLTELKIDGLSIDLVYRSGRLERAATRGDGRVGEDVTANAKVIEDIPHRLQHSDAYP FT VPELVEIRGEVFIAVEDFALVNEQRQKEGGKPFANPRNAAAGSLRQKDTEAVRKRRLKM FT ICHGIGASEGFEADTQFDAYKALEAWGLPVSPYTKRVHSAQEVQERVTYWAQHRHDATH FT EMDGLVIKIDSFAEQRALGSTARAPRWAIAYKYPPEEVTTKLLDIQVGVGRTGRVTPFA FT VMDPVFVAGSTVEMATLHNQTEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVEKRDGSER FT EFIFPTLCPACGTRLAPQKEDDADWRCPNSQSCPAQLSSRLTYLAGRGAFDIEALGEKG FT AEDLIASGVLIDEAQLFNLTEDDLKRTKVYTTKAGALNATGEKLLANLESAKHTDLWRV FT LVALSIRHVGPTAARALAVRYRSLEALRAADVEDIANTEGVGAIIAQSFAQWFDVPWHR FT NIVEVWADAGVTMADSEADIPDQVLEGLTIVVTGSLVDFSRDSAKEAIVSRGGKASGSV FT SKKTSYVVVGENAGSKETKARDLGLRILNEDEFKQLLANGTV" FT misc_feature 21181..22116 FT /note="HMMPfam hit to PF01653, NAD-dependent DNA ligase" FT misc_feature 21184..22503 FT /note="BlastProDom hit to PD003944, PD003944" FT misc_feature 21184..22509 FT /note="HMMSmart hit to SM00532, Ligase N family" FT misc_feature 21499..21588 FT /note="ScanRegExp hit to PS01055, NAD-dependent DNA ligase FT signature 1." FT misc_feature 22120..22368 FT /note="HMMPfam hit to PF03120, NAD-dependent DNA ligase FT OB-fold domain" FT misc_feature 22378..22467 FT /note="HMMPfam hit to PF03119, NAD-dependent DNA ligase C4 FT zinc finger domain" FT misc_feature 22780..22872 FT /note="ProfileScan hit to PS50120, Helix-hairpin-helix FT motif." FT misc_feature 22951..23196 FT /note="ProfileScan hit to PS50172, BRCT domain profile." FT misc_feature 22957..23190 FT /note="HMMPfam hit to PF00533, BRCA1 C Terminus (BRCT) FT domain" FT /note="HMMSmart hit to SM00292, breast cancer FT carboxy-terminal domain" FT stem_loop 23209..23254 FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(23262..23924) FT /transl_table=11 FT /locus_tag="DIP1078" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 23.0 kDa protein Rv3013 or MTV012.27 TR:O53260 FT (EMBL:AL021287) (218 aa) fasta scores: E(): 2.6e-27, 40.63% FT id in 219 aa, and to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3093 TR:AAK47422 FT (EMBL:AE007128) (240 aa) fasta scores: E(): 2.8e-27, 40.63% FT id in 219 aa, and to Mycobacterium leprae hypothetical 24.4 FT kDa protein MLCB637.11c TR:O33103 (EMBL:Z99263) (230 aa) FT fasta scores: E(): 1.3e-26, 40.18% id in 219 aa, and to FT Mycobacterium leprae hypothetical protein ML1704 TR:Q9CBR7 FT (EMBL:AL583923) (232 aa) fasta scores: E(): 1.3e-26, 40.18% FT id in 219 aa" FT /db_xref="GOA:Q6NHQ3" FT /db_xref="InterPro:IPR002912" FT /db_xref="UniProtKB/TrEMBL:Q6NHQ3" FT /protein_id="CAE49601.1" FT /translation="MSYLIRVQIPDEPGSLGRVAEAVGLIGGNISSVDVVEAFSNGTVT FT DDMVVELPAGTMADELITAAHEVEGVEVDSIRPFSGRVDRRGQIAMLASVAGASTNSTL FT LADMVNKMPQALTSSWAILLRAKNPVTRVTASNGAPADDGSNPSALPIEQARILQPEKE FT SWIPESWAILDSSLIAAPLTGTDLVLVIGRVGGPDYLSSEIEHIGNLGKILGSLLKH" FT misc_feature complement(23472..23558) FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT misc_feature complement(23697..23918) FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 24174..24473 FT /transl_table=11 FT /gene="gatC" FT /locus_tag="DIP1079" FT /product="glutamyl-tRNA(Gln) amidotransferase subunit C" FT /EC_number="6.3.5.-" FT /note="Similar to Streptomyces coelicolor FT glutamyl-tRNA(Gln) amidotransferase subunit C GatC or FT SC8D9.10 SW:GATC_STRCO (Q9Z581) (98 aa) fasta scores: E(): FT 5.7e-16, 58.16% id in 98 aa, and to Mycobacterium FT tuberculosis glutamyl-tRNA(Gln) amidotransferase GatC or FT Rv3012c or MT3092 or MTV012.26C SW:GATC_MYCTU (O53259) (99 FT aa) fasta scores: E(): 4.1e-12, 53.6% id in 97 aa" FT /db_xref="GOA:Q6NHQ2" FT /db_xref="InterPro:IPR003837" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHQ2" FT /protein_id="CAE49602.1" FT /translation="MPEISRDEVAHLAKLSRLALTDEELDRFAEQIDGIIGNVSAVQQV FT AAEGVEPMSHPHSIKTTMREDVVEQILTPEQALDQAPAVDQQRFVVPQILGEQD" FT misc_feature 24231..24446 FT /note="HMMPfam hit to PF02686, Glu-tRNAGln amidotransferase FT C subunit" FT CDS 24473..25957 FT /transl_table=11 FT /gene="gatA" FT /locus_tag="DIP1080" FT /product="glutamyl-tRNA(Gln) amidotransferase subunit A" FT /EC_number="6.3.5.-" FT /note="Similar to Mycobacterium tuberculosis FT glutamyl-tRNA(Gln) amidotransferase subunit A GatA or FT Rv3011c or MT3091 or MTV012.25C SW:GATA_MYCTU (O53258) (494 FT aa) fasta scores: E(): 9.4e-131, 74.53% id in 479 aa, and FT to Streptomyces coelicolor glutamyl-tRNA(Gln) FT amidotransferase subunit A GatA or SC8D9.11 SW:GATA_STRCO FT (Q9Z580) (497 aa) fasta scores: E(): 1.3e-117, 68.46% id in FT 482 aa" FT /db_xref="GOA:Q6NHQ1" FT /db_xref="InterPro:IPR000120" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHQ1" FT /protein_id="CAE49603.1" FT /translation="MNKYLVPDSGLTSLSAAELAEKIHSREVTSREVTQAHLDRINDVD FT GTLHAFLHVGVEEALAAADAVDESLDKGEAPASALAGVPLALKDVFVTTDAPTTCASKM FT LEGYVAPYDATVTKKIREAGIPILGKTNMDEFAMGSSTENSAYGPTLNPWDIERTPGGS FT GGGTSAALASGEAPLGIGTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQG FT GPTARTVLDTALLHEVIAGHDKYDATSVNRAVAPVVAAAREGARGDLKGTKIGVVKQFD FT REGYQPGVLEQFHKSVEQLTAQGAEIVEVDCPHFDDALAAYYLILPCEVSSNLARFDGM FT RYGLREGDDGTHSAEEVMSLSRAAGFGPEVKRRIILGTYALSVGYYDAYYLQAQRVRTL FT IAQDFAVAYDKCDVLVSPTTPTTAFKLGEKVSDPLAMYNFDLCTLPLNLAGLCGMSLPS FT GLAPDSQLPTGLQIMAPAFQDDRLYKVGAAFEVGQK" FT misc_feature 24566..25921 FT /note="HMMPfam hit to PF01425, Amidase" FT misc_feature 24842..24865 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 24953..25048 FT /note="ScanRegExp hit to PS00571, Amidases signature." FT CDS complement(26059..26550) FT /transl_table=11 FT /locus_tag="DIP1081" FT /product="Putative acetyltransferase" FT /note="Similar to Bacillus halodurans ribosomal-protein FT (S18)-alanine acetyltransferase BH0547 TR:Q9KFD4 FT (EMBL:AP001508) (151 aa) fasta scores: E(): 0.0026, 52.83% FT id in 53 aa, and to Homo sapiens similar to FT spermidine/spermine N1-acetyl transferase TR:AAH11751 FT (EMBL:BC011751) (170 aa) fasta scores: E(): 0.0061, 28.85% FT id in 149 aa" FT /db_xref="GOA:Q6NHQ0" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6NHQ0" FT /protein_id="CAE49604.1" FT /translation="MSASEFTLVPTTESDRTYIARLNFLTDVFGDEHADIGADFLEDYR FT FYVKQWDPTNGGLIAWSPKMIPAGGAWLVWGNNNDHGYGYVSEDIPEVAIAIEPRYRGK FT GVGSILLNKSLELARTLGAPGLSLSVDDGNPRAKKLYERLGFQHIRHSDAGFSIMCYRF FT " FT misc_feature complement(26110..26379) FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family" FT CDS 26614..28029 FT /transl_table=11 FT /locus_tag="DIP1082" FT /product="transmembrane efflux protein, major facilitator FT family" FT /note="Similar to Mycobacterium tuberculosis CDC1551 drug FT transporter MT1289 TR:AAK45547 (EMBL:AE007004) (579 aa) FT fasta scores: E(): 9.3e-70, 43.87% id in 449 aa, and to FT Streptomyces coelicolor putative transmembrane efflux FT protein SCD82.12 TR:Q9L0L9 (EMBL:AL160431) (490 aa) fasta FT scores: E(): 5.7e-43, 31.79% id in 456 aa, and to FT Streptomyces glaucescens tetracenomycin C resistance and FT export protein TcmA SW:TCMA_STRGA (P39886) (538 aa) fasta FT scores: E(): 3.5e-39, 31.29% id in 425 aa" FT /db_xref="GOA:Q6NHP9" FT /db_xref="InterPro:IPR002198" FT /db_xref="UniProtKB/TrEMBL:Q6NHP9" FT /protein_id="CAE49605.1" FT /translation="MLSTATKSDTQYPTMPLPEKEAWPALIALCIGFFMILLDQTIVAV FT ATPALQADLHASYNEVIWVTSAYLLTFAVPLLITGRLGDRFGPKNIYIIGMVIFTLSSL FT ACGFAPNMMTLIIARAVQGIGASMLTPQTMSVINRVFARERRGAALGIWGSVAGIASLA FT GPILGGFITAWVGWQWIFFINVPIGVVSVFAVARFVPRFKPTERSIDGLSMVLSVVSVF FT ALVFALQQGESAGWAWWIWVVMVVGIAVGVLFAYQQNRAEAKGKDALMPLSLFRVRNFS FT LGNIGIAAMGFTIAGTPLPIMLYLQQVHSLTPLQAGLFMMPQALISAFFSPLIGRWSDH FT YSTSKLAGFGFSTMAMGLVLIAAVMIIDVNLWWLVPAFIVYGLGNAFVWSPNSTSTMRD FT LPLHHMGVGSGVYNTTRQIGCVIGSAAIGAVLQWRIMAGDMGAAYGQSIILGAVMLAVG FT FVSAMLAQDKPRR" FT misc_feature 26614..32553 FT /note="Putative iron uptake system. Low GC content FT (49.78%)" FT misc_feature 26683..27834 FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT misc_feature order(26683..26751,26794..26862,26881..26949,26959..27027, FT 27061..27129,27142..27210,27247..27300,27313..27381, FT 27451..27519,27547..27615,27649..27714,27727..27780, FT 27865..27924,27937..28005) FT /note="14 probable transmembrane helices predicted for FT DIP1082 by TMHMM2.0" FT misc_feature 26695..26769 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 26968..27030 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 27058..27132 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 27667..27729 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT CDS complement(28088..28423) FT /transl_table=11 FT /locus_tag="DIP1083" FT /product="Conserved putative integral membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein SCE6.24 TR:Q9KZR4 (EMBL:AL353832) (100 aa) fasta FT scores: E(): 4.1e-13, 49.47% id in 95 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHP8" FT /protein_id="CAE49606.1" FT /translation="MTTFMGFDVKPANKVSTAPVVATGLIGGWLTARETGIRPLGGVVL FT AAAGIWAGRSWWARGGATRTAALSAVYIAAFGASHPLAKKIGAWPSVVSVTAATAAAAY FT LINDAAQ" FT misc_feature complement(28094..28288) FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature complement(order(28106..28165,28250..28306,28328..28378)) FT /note="3 probable transmembrane helices predicted for FT DIP1083 by TMHMM2.0" FT CDS 28825..29865 FT /transl_table=11 FT /locus_tag="DIP1084" FT /product="Putative iron transport membrane protein, FT FecCD-family" FT /note="Similar to Streptomyces coelicolor putative FT FecCD-family membrane transport protein SC2H12.15 TR:Q9K469 FT (EMBL:AL359215) (368 aa) fasta scores: E(): 2.3e-50, 48.1% FT id in 343 aa, and to Yersinia pestis hemin transport system FT permease protein HmuU YPO0280 SW:HMUU_YERPE (Q56992) (334 FT aa) fasta scores: E(): 6.8e-30, 36.33% id in 344 aa" FT /db_xref="GOA:Q6NHP7" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:Q6NHP7" FT /protein_id="CAE49607.1" FT /translation="MIRRLTTPVLFIALLIVAAVSFVISLSFGSVDYPQEQVWAVVKAH FT LAGDVYPDQSIDAVVWELRAPRGVLALIVGAGLALAGVAMQTLVRNPLADPYLLGISSG FT ASVGATAVLVFGLLGNFGLYALSGGALVGAIIATFAVYAVTLAQGGLTPLRLILSGVVL FT SSAFSALASFLVFKGPDARAAQGVMFWMLGSVAGAQWGKLAIPAVVVALAFAGLLFINR FT QMDALAAGPDTAAALGVNVPALRQGLFFLQAMLVGAMVAVAGGIGFVGLVIPHLARMMV FT GSLHRRLLPIAAAFGAVFMVWVDVLARVAAPPQEIPLGVVTGVIGAPLFLILMGRKSYR FT FGGQES" FT misc_feature 28825..28911 FT /note="Signal peptide predicted for DIP1084 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.479 between residues 29 and 30" FT misc_feature order(28843..28911,29023..29091,29110..29178,29188..29256, FT 29290..29358,29416..29484,29503..29571,29584..29652, FT 29689..29757,29770..29829) FT /note="10 probable transmembrane helices predicted for FT DIP1084 by TMHMM2.0" FT misc_feature 28909..29832 FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature 29644..29835 FT /note="BlastProDom hit to PD001557, PD001557" FT CDS 29865..30662 FT /transl_table=11 FT /locus_tag="DIP1085" FT /product="Putative iron ABC transport system, ATP-binding FT protein" FT /note="Similar to Bacillus subtilis ferrichrome transport FT ATP-binding protein FhuC SW:FHUC_BACSU (P49938) (269 aa) FT fasta scores: E(): 5.1e-24, 35.15% id in 256 aa, and to FT Escherichia coli iron(III)dicitrate transport ATP-binding FT protein FecE or B4287 SW:FECE_ECOLI (P15031) (255 aa) fasta FT scores: E(): 5.5e-24, 37.86% id in 243 aa" FT /db_xref="GOA:Q6NHP6" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NHP6" FT /protein_id="CAE49608.1" FT /translation="MHCQAQGIACGFDTKTTILKDISFSVDQGTMTAIVGVNGVGKSTL FT LRALAGITQPHAGVVTVNGHDIHKIRAKKRAMMLTFVGQEEQPPADLSVEEVVALGRLP FT YIKSWQLGSKNERDIVEHSLDLVGLAGRRKALCSELSGGQRRRVLLARGFAQQTDLVFL FT DEPTNHLDVQHQLHLLHVLRDSGRTIVATIHDLDLAVSHFDQVVVVGNGGVVAAGSPQE FT VLTPEIVSQVFGVESLLVQLEQARRVHLLIDALSHQPHLSPKE" FT misc_feature 29946..30503 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 29949..30500 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 29955..30032 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 29970..29993 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 30222..30254 FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT misc_feature 30282..30326 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 30282..30488 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 30674..31738 FT /transl_table=11 FT /locus_tag="DIP1086" FT /product="Putative iron transport system exported FT solute-binding component" FT /note="Similar to Streptomyces coelicolor putative iron FT transport lipoprotein SC2H12.17 TR:Q9K467 (EMBL:AL359215) FT (345 aa) fasta scores: E(): 8.3e-30, 36.76% id in 321 aa, FT and to Yersinia pestis hemin-binding periplasmic protein FT HmuT precursor YPO0281 SW:HMUT_YERPE (Q56991) (279 aa) FT fasta scores: E(): 0.022, 22.69% id in 282 aa" FT /db_xref="GOA:Q6NHP5" FT /db_xref="InterPro:IPR001969" FT /db_xref="UniProtKB/TrEMBL:Q6NHP5" FT /protein_id="CAE49609.1" FT /translation="MKSKLFPLLVPILGASIVLAGCSNADTSKQAESKGGVTITNCGKE FT VTYTKADNLFVNDGNIISIALAAGAADNVKYVSSVQRDKELLHAKYGKDIDKAEDVAKE FT YPSLESIVAKHPDIFVAGWNYGFSEEKNLTPDALKDQGIDSYILSESCRQEGSEKRGLY FT DPWEAVKMDISNIGKITSHADTADSVVKDIDSRLETLKKAPQADKAPTAFVFDSGTDTV FT FTSGKFGAPQAIIEAAGGRNGAENVEDTWTTVSWENLAASKPDVFVFVDYPGQEFEEKI FT AALRSNPATKNLPAVKENRFINLPYAMWTSGPLNIDAAEQMRKGFEKFGLVPSSEIKPS FT LELPASVPGQNYYK" FT misc_feature 30674..30748 FT /note="Signal peptide predicted for DIP1086 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.606 between residues 25 and 26" FT misc_feature 30824..31591 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein" FT CDS 31846..32553 FT /transl_table=11 FT /locus_tag="DIP1087" FT /product="Putative integral membrane protein containing FT helix-turn-helix motif" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHP4" FT /protein_id="CAE49610.1" FT /translation="MYGQRHKFLEFESSFQRANARFVFLFASLYGCGFIAVALGHALVG FT FLVLIAVFIPLLIKTSRGIRLGRQTADDASVMRRKYDQIVLIIAIVMPSAINIVRDLSR FT AGAVVLAVIATVVFYFLAQSWYGGFKDTAELVRGDSNECIELTDDQLSYLAVLWAARCA FT VGFQEMKLTRLAKETRLSHEVVQKITQIFISQGIVSVFEEYGPSGQKDVAWVQLTEHGC FT GLAKNLERVSSHS" FT misc_feature order(31906..31959,31969..32037,32095..32154,32164..32232) FT /note="4 probable transmembrane helices predicted for FT DIP1087 by TMHMM2.0" FT misc_feature 32350..32415 FT /note="Predicted helix-turn-helix motif with score 1165 FT (+3.15 SD) at aa 169-190, sequence MKLTRLAKETRLSHEVVQKITQ" FT CDS 32753..33781 FT /transl_table=11 FT /gene="pfkA" FT /locus_tag="DIP1088" FT /product="6-phosphofructokinase I" FT /EC_number="2.7.1.11" FT /note="Similar to Mycobacterium leprae FT 6-phosphofructokinase PfkA or MLl1701 or MLCB637.14 FT SW:K6PF_MYCLE (O33106) (343 aa) fasta scores: E(): 4.5e-87, FT 63.84% id in 343 aa, and to Streptomyces coelicolor FT 6-phosphofructokinase 2 PfkA2 or Pfk2 or SC6A11.02 FT SW:K6P2_STRCO (Q9L1L8) (341 aa) fasta scores: E(): 2.1e-75, FT 56.43% id in 342 aa" FT /db_xref="GOA:Q6NHP3" FT /db_xref="InterPro:IPR000023" FT /db_xref="UniProtKB/TrEMBL:Q6NHP3" FT /protein_id="CAE49611.1" FT /translation="MRIATLTSGGDCPGLNAVIRGIVRTCSEYGSTVVGYQDGWVGLME FT DKRIQLYDDENIDRILLRGGTILGTGRLHPDKFKSGLDQIKANLEDAGIDALIPIGGEG FT TLKGAKWLSDNGIPVVGVPKTIDNDVNGTDYTFGFDTAVSVATDAIDRLHTTAESHNRV FT MIVEVMGRHVGWIALHAGMAGGAHYTVIPEQPFDIAEICKAMERRFQMGEKYGIIVVAE FT GALPKEGTMDFVEGGVDQFGHQTFNGIGQVIGEEIKKRLGHDVRTTVLGHIQRGGTPTS FT YDRVLATRYGVHAARACHNGDYGKMVALHGEHIDLIPLEDAVDTLKTVPEGRYRTARAL FT FG" FT misc_feature 32756..33442 FT /note="HMMPfam hit to PF00365, Phosphofructokinase" FT misc_feature 32756..33643 FT /note="BlastProDom hit to PD000707, PD000707" FT misc_feature 32765..32824 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 32840..32881 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 33029..33079 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 33110..33163 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 33164..33220 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 33224..33274 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 33278..33331 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 33386..33424 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 33515..33652 FT /note="HMMPfam hit to PF00365, Phosphofructokinase" FT misc_feature 33536..33604 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 33548..33604 FT /note="ScanRegExp hit to PS00433, Phosphofructokinase FT signature." FT CDS 33890..35395 FT /transl_table=11 FT /gene="gatB" FT /locus_tag="DIP1089" FT /product="glutamyl-tRNA(Gln) amidotransferase subunit B" FT /EC_number="6.3.5.-" FT /note="Similar to Mycobacterium tuberculosis FT glutamyl-tRNA(Gln) amidotransferase subunit B GatB or FT Rv3009c or MT3089 or MTV012.23c SW:GATB_MYCTU (O53256) (509 FT aa) fasta scores: E(): 1.3e-128, 68.75% id in 496 aa, and FT to Streptomyces coelicolor glutamyl-tRNA(Gln) FT amidotransferase subunit B GatB or SC8D9.13 SW:GATB_STRCO FT (Q9Z578) (504 aa) fasta scores: E(): 3e-124, 66.39% id in FT 494 aa" FT /db_xref="GOA:P61342" FT /db_xref="InterPro:IPR017958" FT /db_xref="UniProtKB/Swiss-Prot:P61342" FT /protein_id="CAE49612.1" FT /translation="MTAAMYDLMDYDEVLEKFDPVMGLEVHVELATETKMFSAPSAHFG FT AEPNSNVDPVSLGLPGALPVVNAKGVEWAIKIGLALNCKIAESSRFARKNYFYPDQPKN FT YQISQYDEPIAYDGYLDVVLDDGTPWRVEIERAHMEEDTGKLTHLGGADGRIHGATASL FT VDCNRAGIPLIEIVTKPIEGAGERAPEVARAYVGALRDLVKALGVSDARMDQGSMRCDA FT NVSLRPVGTVEFGTRTETKNINSLKSVEQAVRYEMQRQAQVLEDGGEIVQETRHYQETD FT GSTSKGRPKETAEDYRYFNDPDLPPVIAPKEWVEEIRATLPELPWIRRARIQKEWGLKD FT EEMRDLVNAGALDLIVETVEAGASASEARSWWVAYLSQKANESGVELDSLSITPQQVAR FT VAALVKEGKLTNKLARQAVDGVLAGEGDVDEVVAARGLEVVRDDGAIEKAVDEALAANP FT DIVEKYKAGNTKVTGAIVGAVMKATRGKADPAQVNKLIAEKLA" FT misc_feature 33935..34690 FT /note="HMMPfam hit to PF02934, PET112 family, N terminal FT region" FT misc_feature 34739..34945 FT /note="HMMPfam hit to PF01162, PET112 family, C terminal FT region" FT misc_feature 34946..35389 FT /note="HMMPfam hit to PF02637, GatB/Yqey domain" FT CDS 35501..36598 FT /transl_table=11 FT /locus_tag="DIP1090" FT /product="Putative aldo/keto-reductase family protein" FT /note="Similar to Escherichia coli ORF_O346 B3001 TR:Q46851 FT (EMBL:U28377) (346 aa) fasta scores: E(): 2.5e-73, 56.21% FT id in 354 aa, to Streptomyces coelicolor putative FT oxidoreductase SC7H9.06 TR:Q9EWJ0 (EMBL:AL450223) (348 aa) FT fasta scores: E(): 1.6e-65, 58.48% id in 342 aa, and to FT Homo sapiens voltage-gated potassium channel beta-2 subunit FT KcnAB2 or KcnA2B or KcnK2 TR:Q13303 (EMBL:U33429) (367 aa) FT fasta scores: E(): 9.5e-27, 34.74% id in 331 aa" FT /db_xref="GOA:Q6NHP2" FT /db_xref="InterPro:IPR001395" FT /db_xref="UniProtKB/TrEMBL:Q6NHP2" FT /protein_id="CAE49613.1" FT /translation="MTYSRQAAQVYTPAVQRYEDMEYRQCGHSGLRLPAISLGFWHNFG FT DDKPLANQRAIVRRAFDRGITHFDLANNYGPPEGSAEINFGRIFREDLARHRDEIVIST FT KAGWNMGAGPYSFGGSRKYLMDSLDSSLDRLGLDHVDIFYHHRPDPDTPLEETAYALRD FT IVASGKARYVGISSYGPELTAEISEILAGEGCPLLIHQPSYSILNRWVEEPGEDGENLL FT ESAANNGLGVIAFSPLAQGLLTDRYLEGVPVDSRAAAGKSLGKEMLNAKNLDMVRALND FT LALRRGQTLAQLAIAWVLREQGDYGATTVTSALIGASSVAQLDQNLGALNNLEFSVEER FT NYIDTVAKDAGINIWAGATASKVHD" FT misc_feature 35579..36550 FT /note="HMMPfam hit to PF00248, Aldo/keto reductase family" FT CDS complement(36627..37313) FT /transl_table=11 FT /gene="lysE" FT /locus_tag="DIP1091" FT /product="lysine exporter protein" FT /note="Similar to Corynebacterium glutamicum lysine FT exporter protein LysE SW:LYSE_CORGL (P94633) (233 aa) fasta FT scores: E(): 3.8e-40, 45.02% id in 231 aa, and to FT Escherichia coli hypothetical protein YggA or B2923 FT SW:YGGA_ECOLI (P11667) (211 aa) fasta scores: E(): 3.1e-09, FT 32.44% id in 225 aa" FT /db_xref="GOA:Q6NHP1" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHP1" FT /protein_id="CAE49614.1" FT /translation="MSIAIAGFLMGLSLIVAIGPQNALIIRQGIKREGLIPILVVCILS FT DVILIFGGTAGVGALVDRAPIALVVLKWLGVAYLLYFGFTCFKEAFKRHGQALAVEQSE FT PVAYEPVADASSGVITKTRTKAQPKSAQRTWVKPVLAALAFTWLNPAAYIDVLVMLGGI FT ANQHGPDGRWVFALGALCASLTWFPFIGYTSTRFSTVLSRPAVWRYINIAIGIIMMIMC FT ARLIMH" FT misc_feature complement(36633..37280) FT /note="ProfileScan hit to PS50282, Bacterial transmembrane FT transporters, lysE/yggA family." FT misc_feature complement(order(36633..36698,36735..36800,36831..36896, FT 37053..37118,37134..37199,37239..37304)) FT /note="6 probable transmembrane helices predicted for FT DIP1091 by TMHMM2.0" FT misc_feature complement(36711..37121) FT /note="HMMPfam hit to PF01810, LysE type translocator" FT CDS 37384..38265 FT /transl_table=11 FT /gene="lysG" FT /locus_tag="DIP1092" FT /product="lysine export transcriptional regulatory protein FT LysG" FT /note="Similar to Corynebacterium glutamicum lysine export FT transcriptional regulatory protein LysG SW:LYSG_CORGL FT (P94632) (290 aa) fasta scores: E(): 3.2e-70, 62.54% id in FT 291 aa, and to Streptomyces coelicolor putative LysR-family FT transcriptional regulator SC5F8.17c TR:Q9K4K7 FT (EMBL:AL357613) (300 aa) fasta scores: E(): 3.8e-43, 46.8% FT id in 297 aa, and to Rhodococcus fascians AttR protein FT TR:CAC43333 (EMBL:AJ311775) (320 aa) fasta scores: E(): FT 2.2e-37, 43.43% id in 297 aa" FT /db_xref="GOA:Q6NHP0" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NHP0" FT /protein_id="CAE49615.1" FT /translation="MNPLHLETLLAIIDEGSFEDAAFALGISPSAVSQRIKALERETGR FT VVVRRTSPVTATDAGEVLVQSARRMALLQAETNAQLRGRIERIPLSVAVNADSLATWFR FT RVMASVAEMDNATLHMRIEDESHSLSLLRRGDVLGAVTGEKTPVSGCDSIALGAFRYFA FT VASPKLLDRYTIDGAVDWERMPVLRFGPRDGLQDRDIKRRLGEVPAGRRVNEIPSSEAF FT MEAARVGLGWAMLPDIQALPLLDSGEVVMLDSEVHEVPLYWQRWRLESPALERLTQAVV FT DAALEGLHPLSA" FT misc_feature 37396..37803 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family" FT misc_feature 37429..37494 FT /note="Predicted helix-turn-helix motif with score 2081 FT (+6.27 SD) at aa 16-37, sequence GSFEDAAFALGISPSAVSQRIK" FT misc_feature 37432..37524 FT /note="ScanRegExp hit to PS00044, Bacterial regulatory FT proteins, lysR family signature." FT CDS complement(38276..39358) FT /transl_table=11 FT /locus_tag="DIP1093" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces lividans and S. coelicolor FT hypothetical 38.1 kDa protein 3SCF60.09 TR:O85700 FT (EMBL:AF072709) (341 aa) fasta scores: E(): 4.8e-70, 54.38% FT id in 331 aa, and to Rhodobacter sphaeroides hypothetical FT 38.5 kDa protein ORF11 TR:O33560 (EMBL:AJ000977) (333 aa) FT fasta scores: E(): 5.6e-48, 45.28% id in 318 aa" FT /db_xref="InterPro:IPR017933" FT /db_xref="UniProtKB/TrEMBL:Q6NHN9" FT /protein_id="CAE49616.1" FT /translation="MSTTTIVVDMSTQYEKYTSTENGGEFIRDTQYIDDRIVDSVSAPT FT PLEDGHTLWPAEPRRYRLVAARACPWAHRTVITRRLKGLEDVISLGLVGPTHDWRSWTF FT DLDPNEVDPVLGIPRLRDAYLKRFPDYPHGITVPAIVEVATGKIVTNDYPSIVCDLNDQ FT WSKYERPGAPDLYPETLREEIDAITKRIFTEVNNGVYRCGFAGSQEAYDKAYDRLFTAV FT DWLEERLSHQRYLVGKHITIADIYLYTTLVRFDAVYHGHFKCNRNKITEMPNLWGYLRD FT LFQTPGFGDTTDFTEIKQHYYITHQDVNPTQIVPKGPSLESFFSPHGREKLGDSPFTEG FT VTPPGEISYEERLKNKIDGQ" FT misc_feature complement(38501..38737) FT /note="HMMPfam hit to PF00043, Glutathione S-transferase, FT C-terminal domain" FT misc_feature complement(38504..38698) FT /note="ProfileScan hit to PS50405, Glutathione FT S-transferase profile (C-terminal sub-domain)." FT CDS 39430..40182 FT /transl_table=11 FT /locus_tag="DIP1094" FT /product="Conserved hypothetical exported protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 25.9 kDa protein Rv2972c or MTCY349.15 TR:P95123 FT (EMBL:Z83018) (237 aa) fasta scores: E(): 3.4e-25, 36.55% FT id in 238 aa, and to Streptomyces coelicolor putative FT lipoprotein SCE41.16c TR:Q9F2P3 (EMBL:AL442120) (258 aa) FT fasta scores: E(): 1.5e-19, 37.86% id in 169 aa. Note: FT Contains a putative twin-arginine translocation (TAT) FT system recognition motif (RRSFIRK) at the N-terminal FT region" FT /db_xref="InterPro:IPR018532" FT /db_xref="UniProtKB/TrEMBL:Q6NHN8" FT /protein_id="CAE49617.1" FT /translation="MRARRRSFIRKISRLLAGFAVVMASAVVIQGSWSGLEPQRWEDSI FT RDVLSPAATAEVDPSRADVIALNALTIDDSFGDKPAYSRTHFGNNWADNVSVAGGHNGC FT DTRNDILQRDLTNIVFRPGTRNCVVSTGNLHDLYSGVDVAFTRGPKTSTMVEIDHVVAL FT GNAWYAGAWQWDDETRRNFANDPINLQATTHAENQAKKAKTADRWMPSDPQYHCTYAQR FT QTTIKSTYGLTVTSREKDALMKALATCS" FT misc_feature 39430..39531 FT /note="Signal peptide predicted for DIP1094 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.395 between residues 34 and 35" FT misc_feature 39442..39462 FT /note="Potential twin-arginine recognition motif RRSFIRK" FT CDS 40262..41389 FT /transl_table=11 FT /locus_tag="DIP1095" FT /product="Conserved hypothetical integral membrane protein" FT /note="Similar to Mycobacterium leprae hypothetical 29.5 FT kDa protein ML1698 or MLCB637.18 TR:O33110 (EMBL:Z99263) FT (277 aa) fasta scores: E(): 6.4e-10, 30.79% id in 276 aa, FT and to Mycobacterium tuberculosis hypothetical 28.9 kDa FT protein Rv3005c or MTV012.19c TR:O53252 (EMBL:AL021287) FT (279 aa) fasta scores: E(): 1.3e-08, 28.15% id in 277 aa" FT /db_xref="InterPro:IPR011637" FT /db_xref="UniProtKB/TrEMBL:Q6NHN7" FT /protein_id="CAE49618.1" FT /translation="MADNNIPDRASDFDDDIPTYNGGGNNGAETSSAPNSAHQGAPKKL FT GSGLSAAEIYARAGRAAPQSISPQRPAAKVVANSENENKKDTEVVAPDTQPEDSYKTTI FT IERPAVAPQPVLNDDPHSKPLASDAPTTVYPVAQPQPAEPEPAPVTDYHDEDFAPTPAT FT PVAPATAIAEPVPAPVAAPAVAPAVAPMVTASNQPVHNGEPHRRGTIDFGILVLRLFFG FT TWLILKSVTVFFAMGSHGGINALQEQFGAYPYASTLAVAIPALELAAGVFLVFGLLTPV FT ASALAIIATSFMALHGITKAGGIDIFDHESSVWFAIFLLIIAVVLQFTGPGKYSFDISR FT TWAIRPLASSWVFVVVAVAAAVALWWFGAAVNPFA" FT misc_feature 40583..40831 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature order(40904..40972,41015..41083,41087..41155,41198..41266, FT 41300..41368) FT /note="5 probable transmembrane helices predicted for FT DIP1095 by TMHMM2.0" FT CDS complement(41466..43307) FT /transl_table=11 FT /gene="ilvD" FT /locus_tag="DIP1096" FT /product="dihydroxy-acid dehydratase" FT /EC_number="4.2.1.9" FT /note="Similar to Streptomyces coelicolor dihydroxy-acid FT dehydratase IlvD or SCE7.12c SW:ILVD_STRCO (O69198) (617 FT aa) fasta scores: E(): 1.7e-161, 67.9% id in 617 aa, and to FT Escherichia coli dihydroxy-acid dehydratase IlvD or B3771 FT SW:ILVD_ECOLI (P05791) (616 aa) fasta scores: E(): FT 1.4e-155, 67.37% id in 613 aa" FT /db_xref="GOA:Q6NHN6" FT /db_xref="InterPro:IPR004404" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHN6" FT /protein_id="CAE49619.1" FT /translation="MFPLRSRVTTVGRNAAGARALWRATGTKDNEFGKPIVAIVNSYTQ FT FVPGHVHLKNVGDIVAEAVRAAGGVPKEFNTIAVDDGIAMGHGGMLYSLPSREIIADSV FT EYMVNAHTADAMVCISNCDKITPGMLNAALRLNIPAVFVSGGPMEAGKAVVADGIAHAP FT TDLITAITASAKDSVNDDQLLSIEQSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGT FT TLATHTARRELFETAGKLVVDLCQRYYGEEDESVLPRNIATKKAFINAMALDMAMGGST FT NTVLHTLAAAQEGEIDFDLSDIDALSHRIPCLSKVAPNGNYHIEDVHRAGGIPAILGEL FT RRRDLLEKGVHTVLYKEMDSWLDDWDIRGGKATDKAIELFHAAPGGVRTTEPFSQSNRW FT DSLDTDQARGCIHDVDHAYSADGGLVILRGNLAPDGAVVKAAGVDESIWTFSGPARVVE FT SQEEAVSIILDKQVQPGDVVVIRYEGPAGGPGMQEMLHPTSFLKGAGLGKACALITDGR FT FSGGTSGLSIGHISPEAAHGGLIGLVENGDTITIDIRNRSLNLDVDDAVIEQRRAAMLE FT REKPWTPTNRNRPVSKALRAYASMATSADKGAVRQLD" FT misc_feature complement(41622..43118) FT /note="HMMPfam hit to PF00920, Dehydratase family" FT misc_feature complement(41628..43112) FT /note="BlastProDom hit to PD002691, PD002691" FT misc_feature complement(41742..41777) FT /note="ScanRegExp hit to PS00887, Dihydroxy-acid and FT 6-phosphogluconate dehydratases signature 2." FT misc_feature complement(42912..42944) FT /note="ScanRegExp hit to PS00886, Dihydroxy-acid and FT 6-phosphogluconate dehydratases signature 1." FT CDS complement(43596..44081) FT /transl_table=11 FT /locus_tag="DIP1097" FT /product="Putative low molecular weight protein antigen 6" FT /note="Similar to Mycobacterium tuberculosis low molecular FT weight protein antigen 6 Cfp6 or Rv3004 or MT3084.1 or FT MTV012.18 SW:CFP6_MYCTU (O53251) (112 aa) fasta scores: FT E(): 7.9e-07, 34.57% id in 107 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHN5" FT /protein_id="CAE49620.1" FT /translation="MNSDTTVVFRPERTHLLAAGVMLAIMLLVIGARPALLFWLPIIPL FT VFILWVLRSSTTVSESGIEARYLAAATKAARWEEIQGVSFKGSKTILHTNDGRSFPLPA FT VSFNSLPQLETASRGRIPDALTQGKMAADEKIVIVHRDGYQEMLTKEQYEQRQAENK" FT misc_feature complement(43926..43991) FT /note="1 probable transmembrane helix predicted for DIP1097 FT by TMHMM2.0" FT CDS 44468..46426 FT /transl_table=11 FT /gene="ilvB" FT /locus_tag="DIP1098" FT /product="Acetolactate synthase large subunit" FT /EC_number="2.2.1.6" FT /note="Similar to Corynebacterium glutamicum acetolactate FT synthase large subunit IlvB SW:ILVB_CORGL (P42463) (626 aa) FT fasta scores: E(): 4.3e-181, 75.32% id in 620 aa, and to FT Mycobacterium tuberculosis acetolactate synthase IlvB or FT Rv3003c or MT3083 or MTV012.17c SW:ILVB_MYCTU (O53250) (618 FT aa) fasta scores: E(): 1.6e-152, 64.94% id in 599 aa" FT /db_xref="GOA:Q6NHN4" FT /db_xref="InterPro:IPR000399" FT /db_xref="UniProtKB/TrEMBL:Q6NHN4" FT /protein_id="CAE49621.1" FT /translation="MLQHVSPRNYHKELDVVASSTQPNQPTPATLARRAQVLKPERMTG FT ADAIVRSLEELGIDMVFGLPGGAVLPLYDSLYASTKLRHVLVRHEQGAGHAATGYAQAT FT GKVGVCIATSGPGATNLVTPIADAHLDSVPLVAITGQVGRSLLGSDAFQEADIRGITMP FT VTKHNFMVTDVNMIPQAIAEAFYLAASGRPGPVLVDIPKDIQQAEIDFHWPPTIDLPGY FT RPVTTPHSRPVEQAAKMISQARRPVLYVGGGVIKANASQELQAFAEHTGIPVVTTLMAL FT GAFPGSHELNMGMPGMHGTVPAVGALQKSDLLITIGARFDDRVTGALASFAPGAKVIHA FT DIDPAEIGKIRAVDVPIVGDAQEVLTALLNVYKDLDLPQPRHERWLRYLNGLKSNYPRG FT WEKSDDGMIEPQAVIRALAKTVGTDAIYAAGVGQHQMWSAQFLDFEKPRTWLNSGGLGT FT MGYSVPAALGAKAGCPDKEVWAIDGDGCFQMTNQELATAAVEGMPIKVALINNGNLGMV FT RQWQTLFYDGNYSNTKLRNQGQYMPDFVMLAESLGCAAFRVTEETDIVPTIEKARAIND FT RPVVIDFIVGEDAQVWPMVAAGHSNSDIEYAHGLRPLFDGESSAAETPEDIDDVIDEAT FT LLALEAQKRHLEPKENI" FT misc_feature 44588..45106 FT /note="HMMPfam hit to PF02776, Thiamine pyrophosphate FT enzyme, N-terminal TPP binding domain" FT misc_feature 45152..45607 FT /note="HMMPfam hit to PF00205, Thiamine pyrophosphate FT enzyme, central domain" FT misc_feature 45677..46216 FT /note="HMMPfam hit to PF02775, Thiamine pyrophosphate FT enzyme, C-terminal TPP binding domain" FT misc_feature 45866..45925 FT /note="ScanRegExp hit to PS00187, Thiamine pyrophosphate FT enzymes signature." FT CDS 46442..46966 FT /transl_table=11 FT /gene="ilvH" FT /gene_synonym="ilvN" FT /gene_synonym="livS" FT /locus_tag="DIP1099" FT /product="Acetolactate synthase small subunit" FT /EC_number="2.2.1.6" FT /note="Similar to Mycobacterium tuberculosis acetolactate FT synthase small subunit IlvH or IlvN or Rv3002c or MT3082 or FT MTV012.16c SW:ILVH_MYCTU (O53249) (168 aa) fasta scores: FT E(): 1.3e-28, 54.77% id in 157 aa, and to Corynebacterium FT glutamicum (Brevibacterium flavum) acetohydroxy acid FT synthase, small subunit IlvN or LivS TR:Q57091 FT (EMBL:L09232) (172 aa) fasta scores: E(): 5.4e-47, 81.06% FT id in 169 aa" FT /db_xref="GOA:Q6NHN3" FT /db_xref="InterPro:IPR019455" FT /db_xref="UniProtKB/TrEMBL:Q6NHN3" FT /protein_id="CAE49622.1" FT /translation="MQQQETFRHILSVLVQDVDGIISRVSAMFTRRSFSLVSFVSGKTE FT MHGINRITIVVDASTQDIEQITKQLNKLIPVLKVVRLDEDVTVARALMLVKVSADASNR FT PQVVDAAKIFRAHVVDVAPDSVVIEATGNKGKLRALLDVLEPFGIRELISSGQIALNRG FT SKTMAPQSSRS" FT misc_feature 46466..46687 FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 47086..48099 FT /transl_table=11 FT /gene="ilvC" FT /locus_tag="DIP1100" FT /product="Ketol-acid reductoisomerase" FT /EC_number="1.1.1.86" FT /note="Similar to Corynebacterium glutamicum ketol-acid FT reductoisomerase IlvC SW:ILVC_CORGL (Q57179) (338 aa) fasta FT scores: E(): 5.3e-95, 76.97% id in 330 aa, and to FT Mycobacterium tuberculosis ketol-acid reductoisomerase IlvC FT or Rv3001c or MT3081 or MTV012.15c SW:ILVC_MYCTU (O53248) FT (333 aa) fasta scores: E(): 3.8e-86, 67.26% id in 333 aa" FT /db_xref="GOA:Q6NHN2" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHN2" FT /protein_id="CAE49623.1" FT /translation="MAIELLYDADADLSIIQGRKVAVIGYGSQGHAHAQCLRDSGVEVV FT IGLREGSKSSEKAQEAGFEVKSNADAAAWADVIMLLAPDTSQAEIFSHDIEPNLKDGDA FT LLFGHGLNIHFELIKPAVNITVGMVAPKGPGHLVRRQFVDGKGVPCLIAVAQDPKGEGK FT DLALSYAAAIGGARAGVIPTTFREETETDLFGEQVVLCGGLEHLMMKGFEVLAEAGYAP FT EMAYFEVLHEMKLIVDLIWEGGIENMNYSISETAELGGYVAGPRIITPEVKENMKAVLA FT DIQSGKFVRDMVADVEAGQPELKRYREEIAAHPIEATGSKLRDLMSWVKNPLDETA" FT misc_feature 47638..48075 FT /note="HMMPfam hit to PF01450, Acetohydroxy acid FT isomeroreductase, catalytic domain" FT misc_feature 47818..47904 FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS 48249..49172 FT /transl_table=11 FT /locus_tag="DIP1101" FT /product="Cation-efflux system integral membrane protein" FT /note="Similar to Staphylococcus aureus (strain N315) CzrB FT protein or SA1948 or SAV2146 TR:BAB58308 (EMBL:AP003136) FT (325 aa) fasta scores: E(): 4e-37, 37.74% id in 302 aa, and FT to Alcaligenes eutrophus cobalt-zinc-cadmium resistance FT protein CzcD SW:CZCD_ALCEU (P13512) (316 aa) fasta scores: FT E(): 9.2e-36, 40.84% id in 284 aa" FT /db_xref="GOA:Q6NHN1" FT /db_xref="InterPro:IPR002524" FT /db_xref="UniProtKB/TrEMBL:Q6NHN1" FT /protein_id="CAE49624.1" FT /translation="MSNHHHDHHNHHDHHHGAPSSSRALLLVAGLTFAFFIVELVGGAL FT AKSLALMSDALHMLSDSTGLIIALIAVVIGRRKATSQATYGYKRIEVLAALVNALSVTF FT ITGWIVLEAIRRLSSHTVIDTRTTMVIAIIGLVFNIVGAVVLHGHSHEGVNVKGAYLHI FT LVDLGGSVAVIVSSLLIMTTGWMWCDTAVSVLLAVIILPRSLSLVRSTLGILMERVPKT FT VDVETIRSRIAQIDGVGGVHDVHVWSIDGQQDIATVHVVVDENVNVKDCTTLDRIQKVF FT HDAGIDHVTVQLEHDTHMSHELPCQH" FT misc_feature 48258..48296 FT /note="ProfileScan hit to PS50316, Histidine-rich region." FT misc_feature order(48318..48386,48414..48473,48522..48590,48633..48701, FT 48720..48788,48801..48869) FT /note="6 probable transmembrane helices predicted for FT DIP1101 by TMHMM2.0" FT misc_feature 48321..49148 FT /note="HMMPfam hit to PF01545, Cation efflux family" FT CDS 49225..51033 FT /transl_table=11 FT /locus_tag="DIP1102" FT /product="Conserved hypothetical protein" FT /note="Similar to Anabaena sp All3615 protein TR:BAB75314 FT (EMBL:AP003593) (621 aa) fasta scores: E(): 1.8e-37, 29.29% FT id in 594 aa, and to Streptomyces coelicolor hypothetical FT 67.8 kDa protein SC4G2.12c TR:O86684 (EMBL:AL031371) (605 FT aa) fasta scores: E(): 9.5e-29, 34.55% id in 602 aa" FT /db_xref="InterPro:IPR019794" FT /db_xref="UniProtKB/TrEMBL:Q6NHN0" FT /protein_id="CAE49625.1" FT /translation="MGFSTPSYDLIYLFNRIDRGDLQLPDFQREYRWDVDRIRALLVTV FT LRGYPMGSIMALDTRGEEMRFRPRPLFGAPDTGMAPGLLLLDGQQRLTTLYQCLTGDGL FT VESVDFRNKKIKRRFFVDIQKAVSAEVMPDEAVISVDQHGDVKSHFAKNDIPRLATEED FT MLRHQCMPVSSLLQNRGTDMLFDLAQNAEPDARERIKNFHNTVLKPVVRYSVPMVRLDR FT ETAQEGVGSIFAAANSSGLQMDVFELLTSLFAAQDPDFDFRADWHKTEEVLRQFPALDQ FT IGQTEFLTAVALYVTAVQGHASGHREDILKLSVADYQYAAPLIRAAFHEAAHYMRERCI FT MSIKQVPYSAQLIPLTVIIALLARDPKNMSHKDSWDRLNQWFWCGVFGELYGSPALAVR FT MGVDVDEVTRWIDDANNPSPSVEKPQSIRDARFVESRLLSACPESGLYKGIYALLMGRG FT ARDFRTGMAFDHTNFEQLGVHFRPVFPESWCEEHGINPVLSSSVLNRTPMGRRTHVMVE FT GASPARYLVRLQSKSLMDDAEFDQVLATHLADPHTLFAGQAEEFFSDRRSKFLTMIEEA FT MGTAAIRDVDEGDLTAGEEGPLAFEK" FT misc_feature 50182..50217 FT /note="ScanRegExp hit to PS00436, Peroxidases active site FT signature." FT CDS 51089..52570 FT /transl_table=11 FT /locus_tag="DIP1103" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHM9" FT /protein_id="CAE49626.1" FT /translation="MGTSGCTVDTSRRDKVRMALPHAELEQARMDNLTRHVAQNFLREP FT QVVGEPNDSGVAVSQLLFEKSDTVVISDREIHHQLRAASIAVVAHAPMLLMDDTDRDAV FT QAEIGRLGARYILAIGDVGLPKTTGNVKVIPDSGSLTALGKLTSLQFRTQRIDVSNALS FT AVSRLDGTHPMWLLTNRQEKVQSSPSDGEVSAFPVQSRRDAGAAPQVIATQESGIAAVA FT TARSYGASVTVMRFPDPRLNVESMRAVAGLSDQPLIALGSQFGTSQQLSERIELGERAP FT LALPHKTGLVFALRTLRARYLNDSDVSEHVDIPYGANYVRTIAHPLSSQDQQDWKAWAD FT AINAQDGFVFIEIDAVHRDADEILDSVEEIVSQPSIGVILRNAAQVCARSPQSRQRIAD FT RLMHWNSEVINHNGDQLGVVLEGVDILRGGVCGISPQELMGLGLAILPARGEHLGGDAT FT VNSQLYWDDWFVAERESFQPTGTLRSPRLGLIIRD" FT CDS 52733..54328 FT /transl_table=11 FT /gene="serA" FT /locus_tag="DIP1104" FT /product="D-3-phosphoglycerate dehydrogenase" FT /EC_number="1.1.1.95" FT /note="Similar to Mycobacterium tuberculosis FT D-3-phosphoglycerate dehydrogenase SerA or Rv2996c or FT MT3074 or MTV012.10 SW:SERA_MYCTU (O53243) (528 aa) fasta FT scores: E(): 3.6e-129, 67.56% id in 521 aa, and to Homo FT sapiens D-3-phosphoglycerate dehydrogenase PhgDH FT SW:SERA_HUMAN (O43175) (533 aa) fasta scores: E(): 1.4e-43, FT 34.47% id in 438 aa" FT /db_xref="GOA:Q6NHM8" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NHM8" FT /protein_id="CAE49627.1" FT /translation="MSQNGRPVVLIADKLAQSTVDALGDAVEVRWVDGPNRAELLAAVP FT EADALLVRSATTVDEEVLNAATNLKIVGRAGVGLDNVDIATATDKGVMVANAPTSNIHS FT ACEHAISLLLSTARQIPAADKTLRVGEWKRSSFKGVEIFGKTVGIVGFGHIGQLFAQRL FT AAFEATIIAYDPYANPARAAQLGVELVDLESLMQRADFVTIHLPKTAETAGMFNAELLA FT KSKQGQIIINAARGGLVDEQALADAIDAGRIRGAGFDVFATEPCTDSPLFNRPEVVVTP FT HLGASTVEAQDRAGTDVAASVLKALAGEFVPDAVNVSGGRVGEEVALWLDLARKLGVVA FT GKLLDKAPVAVEVEARGELSTENIDVLGLSALRGVFSSFIEEPVTFVNAPRIAEERGVK FT LDVTTASESLTHRSVLEVCVIGADGSKESVIGALTGLNHVEKIVRINKRGLDLRAQGFN FT VYFQYTDTPGALGKVGTALGAQGFNIDAAALSQDSEGDGATLVLRVDKPIPDALVEEIA FT AGIGAEAFAVDFDA" FT misc_feature 52748..53029 FT /note="HMMPfam hit to PF00389, D-isomer specific FT 2-hydroxyacid dehydrogenase, catalytic domain" FT misc_feature 53033..53578 FT /note="HMMPfam hit to PF02826, D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD binding domain" FT misc_feature 53147..53170 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 53171..53254 FT /note="ScanRegExp hit to PS00065, D-isomer specific FT 2-hydroxyacid dehydrogenases NAD-binding signature." FT misc_feature 53948..53995 FT /note="ScanRegExp hit to PS00589, PTS HPR component serine FT phosphorylation site signature." FT misc_feature 54101..54316 FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 54471..55490 FT /transl_table=11 FT /gene="leuB" FT /locus_tag="DIP1105" FT /product="3-isopropylmalate dehydrogenase" FT /EC_number="1.1.1.85" FT /note="Similar to Corynebacterium glutamicum FT 3-isopropylmalate dehydrogenase LeuB SW:LEU3_CORGL (P94631) FT (340 aa) fasta scores: E(): 7.6e-105, 83.77% id in 339 aa, FT and to Mycobacterium tuberculosis 3-isopropylmalate FT dehydrogenase LeuB or Rv2995c or MT3073 or MTV012.09 FT SW:LEU3_MYCTU (P95313) (336 aa) fasta scores: E(): 4.9e-84, FT 68.93% id in 338 aa" FT /db_xref="GOA:Q6NHM7" FT /db_xref="HSSP:1A05" FT /db_xref="InterPro:IPR001804" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHM7" FT /protein_id="CAE49628.1" FT /translation="MKLAVIGGDGIGPEVTAEALKVLNAVRDDIEVTDYDLGARRYLRN FT GELLADADLVSLREHDAILLGAIGAPGEVPPGVLERGLLLKMRFALDHHVNLRPSKLYP FT TATSPLANPGDIDFVVVREGTEGLYCGNGGTLREGTPHEIASEVSQNTRYGVERVVRDA FT FERAQNRKKHLTLVHKTNVLVNAGGLWQRTVNEIATEYPEVTVDYNHIDAATIYMVTDP FT SRYDVIVTDNLFGDILTDLAGAVTGGIGLAASGNIDATGVNPSMFEPVHGSAPDIAGQG FT IADPTAAILSAAMLLRHVGDESNAQRIEAAVTYDVAERPAGPVKTVEVGDRIVAALQR" FT misc_feature 54474..55469 FT /note="HMMPfam hit to PF00180, Isocitrate/isopropylmalate FT dehydrogenase" FT misc_feature 55164..55223 FT /note="ScanRegExp hit to PS00470, Isocitrate and FT isopropylmalate dehydrogenases signature." FT CDS join(55587..56426,56428..57117) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1106" FT /product="Conserved hypothetical protein (pseudogene)" FT /note="Pseudogene. Similar to Vibrio cholerae hypothetical FT protein VC1291 TR:Q9KSG5 (EMBL:AE004208) (637 aa) fasta FT scores: E(): 2.7e-26, 26.39% id in 485 aa, and to FT Rhodobacter capsulatus hypothetical 66.0 kDa protein FT TR:O68043 (EMBL:AF010496) (608 aa) fasta scores: E(): FT 1.9e-23, 27.38% id in 566 aa. Contains several in-frame FT stop codons and a frameshift at residue 279" FT misc_feature 55617..55844 FT /note="ProfileScan hit to PS50042, cAMP/cGMP binding FT motif." FT misc_feature 55962..56120 FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature 56160..56318 FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature 56169..56315 FT /note="ProfileScan hit to PS50147, SNF4 repeat." FT misc_feature 56169..56318 FT /note="HMMSmart hit to SM00116, Domain in cystathionine FT beta-synthase and other proteins." FT CDS 57135..57314 FT /transl_table=11 FT /locus_tag="DIP1110" FT /product="Conserved hypothetical protein" FT /note="Some similarity to Vibrio cholerae DNA polymerase FT III, epsilon subunit, putative VC1290 TR:Q9KSG6 FT (EMBL:AE004208) (236 aa) fasta scores: E(): 0.37, 38.33% id FT in 60 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHM6" FT /protein_id="CAE49630.1" FT /translation="METTSLDPRNGSIVAIGWVPVENGVIMVVSACYQLVYDVQAQESV FT GDSGTPHTMQRVMR" FT CDS 57360..57692 FT /transl_table=11 FT /locus_tag="DIP1111" FT /product="Putative integral membrane protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHM5" FT /protein_id="CAE49631.1" FT /translation="MDKLFRVVLFGAGLYYLCTAVWWWISGRNVVISWLYIGAVAILVA FT GAWLTRRYQKKMVAQFGEFGELSEQQRDTIRELKAGGRVVEAVRKTRVWYPSLGLVEAK FT KLVDEL" FT misc_feature order(57378..57437,57447..57506) FT /note="2 probable transmembrane helices predicted for FT DIP1111 by TMHMM2.0" FT CDS 57766..58563 FT /transl_table=11 FT /locus_tag="DIP1112" FT /product="Putative hydrolase, FAA-family" FT /note="Similar to Mycobacterium tuberculosis possible FT 2-hydroxyhepta-2,4-diene- 1,7-dioate isomerase Rv2993c or FT MTV012.07c TR:O53242 (EMBL:AL021287) (239 aa) fasta scores: FT E(): 2.5e-42, 48.73% id in 238 aa" FT /db_xref="GOA:Q6NHM4" FT /db_xref="InterPro:IPR018833" FT /db_xref="UniProtKB/TrEMBL:Q6NHM4" FT /protein_id="CAE49632.1" FT /translation="MRFGRIATPDGMCFCVVEGDDAQAICKEIEGTPFTEPKYTGRQWK FT LDEVRLLAPMLPSKIVAIGRNYADHVKEVFQKSAEHLPPTLFLKPPTAVVGPGAAIRIP FT EFATKVEFEGELAMVIAKPCKNVKKEDWKSVVLGFTIINDVSSRDLQFADGQWARAKGI FT DTFAPLGPWIETDIDSIETDNLPIKAHLTHDGITETKQDSNSNQMIMDLGEIIEFITAS FT FTLLPGDVICTGSPAGTAAMVPGDFIEIEIPGIGRLGNPVAKA" FT misc_feature 58000..58497 FT /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA) FT hydrolase family" FT CDS 58586..59230 FT /transl_table=11 FT /locus_tag="DIP1113" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor putative FT methyltransferase SCF43A.25c TR:Q9XA90 (EMBL:AL096837) (215 FT aa) fasta scores: E(): 2.2e-12, 36.23% id in 207 aa" FT /db_xref="GOA:Q6NHM3" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q6NHM3" FT /protein_id="CAE49633.1" FT /translation="MSTTHNSLPASSDKHHDGHGEASLYHDSHGHAWSGNPNYTLTQLI FT PELRINLGSSLDIGSGEGADAAWLASLGWKAVGLEPSGVAVERSRELSSNATFIQGKVP FT QDLDRCGGPFDLVTGFYIPIAGEDAWRAIARQVADGGYLIYVHHNLDELRAKGHPLLGR FT DDLLMPFDAADLAPSGAWEIVVHETRHREIVGGHGHHHHLDDVLVLKRRKK" FT CDS complement(59211..60344) FT /transl_table=11 FT /locus_tag="DIP1114" FT /product="Putative isochorismate synthase" FT /note="Similar to Bacillus subtilis isochorismate synthase FT DhbC SW:DHBC_BACSU (P45744) (398 aa) fasta scores: E(): FT 1.9e-43, 41.01% id in 356 aa, and to Stigmatella aurantiaca FT MxcD TR:Q9F639 (EMBL:AF299336) (408 aa) fasta scores: E(): FT 7e-40, 36.91% id in 382 aa, and to Vibrio cholerae FT vibriobactin-specific isochorismate synthase VibC or VC0773 FT SW:VIBC_VIBCH (O07898) (395 aa) fasta scores: E(): 2.8e-31, FT 35.45% id in 330 aa" FT /db_xref="GOA:Q6NHM2" FT /db_xref="HSSP:1K0G" FT /db_xref="InterPro:IPR005801" FT /db_xref="UniProtKB/TrEMBL:Q6NHM2" FT /protein_id="CAE49634.1" FT /translation="MCAHRPATAPDFLLSRSHGSIRTQGAVETFSDPGKAVEALRSGRV FT ELVVGALAFRRDHACALTVPRSVIREEGPLEPHAYYRQGPGSIVNAQVEKLVPSLDKHH FT ARVEAAINTIKSTSLKKVVLARAVDMTFSPAVDPRLIAARLIDLSRNRDGFIADLTPAG FT EDFAGAMLVGSSPEVLIKKQGSTVTAYPLAGSAPRSADAVTDATNAELLRRSHKDLQEH FT SYVVEHLRNVLEPLCSKLSIPANPELTKTNEMWHLATPVVGTLKDASLTALELAMRTHP FT TPAICGTPTDAAEELISIAEGDRRFYAGTVGWADNHGDGEFMVSIRCAEVSSDGTSARA FT WAGGGIVAESDAAAEVEETTAKLRTIMKALGITSFDA" FT misc_feature complement(59235..59834) FT /note="HMMPfam hit to PF00425, chorismate binding enzyme" FT misc_feature complement(59235..59990) FT /note="BlastProDom hit to PD000779, PD000779" FT CDS 60374..61867 FT /transl_table=11 FT /gene="gltX" FT /gene_synonym="gltS" FT /locus_tag="DIP1115" FT /product="glutamyl-tRNA synthetase" FT /EC_number="6.1.1.17" FT /note="Similar to Mycobacterium tuberculosis glutamyl-tRNA FT synthetase GltX or GltS or Rv2992c or MT3070 or MTV012.06c FT SW:SYE_MYCTU (O53241) (490 aa) fasta scores: E(): 7.3e-122, FT 63.87% id in 490 aa, and to Bacillus subtilis glutamyl-tRNA FT synthetase GltX SW:SYE_BACSU (P22250) (483 aa) fasta FT scores: E(): 1e-62, 38.55% id in 485 aa" FT /db_xref="GOA:Q6NHM1" FT /db_xref="InterPro:IPR004527" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHM1" FT /protein_id="CAE49635.1" FT /translation="MNIMSDVRVRFCPSPTGTPHVGMVRTALFNWAHARHTGGKLIFRI FT EDTDAARDSEESYQAIIDSLKWLGMDWDEGVIVGGPHEPYRQSQRMDIYKDVLEKLKEA FT GFVYPAYSTAQEVEERHKAAGRDPKLGYDNYDRTLTDEQIAAFEAEGRQPVWRLRMPER FT DWKWNDLVRGEIEFKSSTQPDYVVARSNGAPLYTLVNPVDDALMGITHVLRGEDLLPST FT PRQLALYEALKVIGVAQQTPEFGHLPFVMGEGNKKLSKRDPQSNLFNHRDAGIIPEGML FT NYLALLGWSLAGEKDIFSVDELVENFDVTNVLANPARFDQKKLEAINADHIRLLEPKDF FT EQRLRAYLTEYTDFPTDYPAEKFAIAAELVQTRIKMLGDAYGLLSFLAIADEDLTLDEK FT SAKKNLKETAIPALDAGIAALEGVEEWTTPAIEAALHKALIEDLDLKPRVAFGALRVGI FT SGQAVSPPLFESMELLGKESTLTRLRATREVTPYQVAAE" FT misc_feature 60389..61834 FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q)" FT misc_feature 60401..60439 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 60443..60478 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 60488..60529 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 60953..60985 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 61001..61027 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT CDS 62027..63061 FT /transl_table=11 FT /locus_tag="DIP1116" FT /product="Putative exported esterase/hydrolase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT esterase, putative MT3397 TR:AAK47740 (EMBL:AE007148) (304 FT aa) fasta scores: E(): 5.3e-09, 30.57% id in 242 aa, and to FT Piromyces equi cinnamoyl ester hydrolase EstA TR:Q9Y871 FT (EMBL:AF164516) (536 aa) fasta scores: E(): 1.2e-06, 25.19% FT id in 258 aa, and to Pseudomonas fluorescens esterase D FT XynD TR:Q51815 (EMBL:X58956) (583 aa) fasta scores: E(): FT 5.8e-06, 27.37% id in 274 aa" FT /db_xref="GOA:Q6NHM0" FT /db_xref="UniProtKB/TrEMBL:Q6NHM0" FT /protein_id="CAE49636.1" FT /translation="MFDATRAAFLGVAVFISVLLVASFFSPTPGRAVEPAPAGAPAQEG FT SLPHDGLGSIKPIHDVDLGGVEQPPLPAPVDPDPSFNPQPPFAPGELREGFVDVGNGNI FT RRYLIHVGTNYQPHAPELTPVVFGFGGWKDTPEKFADYSRFGLTDFGANAMIIYPEGIA FT RAWEGAPYAATRVGDDVHFVRTILNAVDADYRIDRSRVYAVGMSNGGGMAASLACHAPD FT LVAGVVSVSAAYYEPVVADCAPGAVATLDIHGTHDEVIAYQGGMRHGAPFLGAEQVVAG FT VAARNGCGPALPPRWIEGPAEHYGFAGCAAPVEHVRVLGQKHVWNGVPHATTLAWEFLH FT HQHK" FT misc_feature 62027..62152 FT /note="Signal peptide predicted for DIP1116 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.530 between residues 42 and 43" FT misc_feature 62396..62692 FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT tRNA 63164..63235 FT /gene="tRNA-Gln" FT /product="transfer RNA-Gln" FT /anticodon=(pos:63197..63199,aa:Gln) FT /note="tRNA Gln anticodon CTG, Cove score 49.89" FT tRNA 63269..63341 FT /gene="tRNA-Glu" FT /product="transfer RNA-Glu" FT /anticodon=(pos:63303..63305,aa:Glu) FT /note="tRNA Glu anticodon CTC, Cove score 60.15" FT CDS complement(63418..63963) FT /transl_table=11 FT /locus_tag="DIP1117" FT /product="Putative TetR-family transcriptional regulator" FT /note="Similar to Streptomyces coelicolor SC10A5.11 protein FT TR:O54102 (EMBL:AL021529) (198 aa) fasta scores: E(): FT 8.8e-14, 32.94% id in 170 aa, and to Streptomyces FT roseosporus WhiR protein TR:P72569 (EMBL:U58281) (179 aa) FT fasta scores: E(): 1.5e-05, 24.5% id in 151 aa" FT /db_xref="GOA:Q6NHL9" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q6NHL9" FT /protein_id="CAE49637.1" FT /translation="MSQPESPEQRRTAILATAERILRSGSPLTLGKVAQEVGISRTALY FT RYVSGIDEIIETLATKDFPHWLTSLRSAMAAAPTPKQRALCWAIESIKLGRETDHAWLA FT TLSSLNLSENCRNAIASEHSKIDQLLRVELAQLGTPHIELTVATVRAVVMTAIQTPSST FT EADDYFTATISAIIDASC" FT misc_feature complement(63790..63924) FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family" FT misc_feature complement(63817..63882) FT /note="Predicted helix-turn-helix motif with score 1984 FT (+5.94 SD) at aa 28-49, sequence LTLGKVAQEVGISRTALYRYVS" FT CDS 64105..66258 FT /transl_table=11 FT /locus_tag="DIP1118" FT /product="Integral membrane protein, MmpL family" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein SC10A5.10c SW:MMLB_STRCO (O54101) (847 aa) fasta FT scores: E(): 5.3e-106, 47.61% id in 733 aa, and to FT Mycobacterium tuberculosis putative membrane protein MmpL8 FT or Rv3823c or MT3931 or MTCY409.07 SW:MML8_MYCTU (O07800) FT (1089 aa) fasta scores: E(): 1.1e-21, 27.76% id in 461 aa" FT /db_xref="GOA:Q6NHL8" FT /db_xref="InterPro:IPR000731" FT /db_xref="UniProtKB/TrEMBL:Q6NHL8" FT /protein_id="CAE49638.1" FT /translation="MFEVLYGSRKRALFTVIGWIIMIGVFAALAPTIDDVLTKGNNNAG FT ADAASTQAAQLIEMNFPDADAVPAILTVRGGDANVSKVLAAVDSVRENVDRFGPSISAA FT CKRPSPTCVPASTTEMTSGDTNLVVIPVTGDPTTTEYRDDIKTLRAELAHAFGVEDLTP FT DAAPVHVTGPVGIVTDTVNVFAGGDKILLLATMLLVLVILLAVYRAPLMALLPLFAVGM FT AMRLAQTGGALLADAGIINISSQTASIMTVLLFGVGTDYALIINARWREHLRDTNDPAR FT AMIVAMGHVLPVLLSSAGTIVAAMLALLTTTSPTLQGFGPYLAIGVVSAMIAALTLLPA FT LMVLAGRVALWPNKPELGHDSKIWTKVADLVTTKPKAILAGTAALMVVLALGLLNYSVS FT YNLMSGFRIATDSAAGQKVIAQDFGEGEIAPSTMIVTGPGADAAAKAIAEQLPQQLPGD FT VTRAAFSPRKDVTEDGSAARVDVVLNADPYSTTAFDMLDRATEQAGEIAGSEVRVASAG FT ETATARDSAAEVTHDFTLLVPLIFLVIALILGLLLRSWLAPIYLIATLGLSFAATLGLV FT AFITLTVQGDTGFGSYVPVYVLVFLTALGVDYTIFVMARLREEMRDKTMAEAMRRAIIA FT TGGVVSSAGLILAATFAVLMTQPIRELYQFGMAMMLGILIDTFIIRPLMVPAIVTLLGD FT RALLPAKPRQESCEASIEPVPAS" FT misc_feature 64105..64185 FT /note="Signal peptide predicted for DIP1118 by SignalP 2.0 FT HMM (Signal peptide probability 0.959) with cleavage site FT probability 0.312 between residues 27 and 28" FT misc_feature order(64138..64206,64672..64725,64744..64812,64840..64899, FT 64957..65025,65068..65136,65233..65301,65701..65760, FT 65779..65847,65875..65943,66001..66069,66112..66180) FT /note="12 probable transmembrane helices predicted for FT DIP1118 by TMHMM2.0" FT misc_feature 64822..65136 FT /note="ProfileScan hit to PS50156, Sterol-sensing domain FT (SSD) profile." FT misc_feature 65788..66174 FT /note="ProfileScan hit to PS50156, Sterol-sensing domain FT (SSD) profile." FT CDS 66434..67894 FT /transl_table=11 FT /locus_tag="DIP1119" FT /product="Conserved hypothetical exported protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0099 TR:Q9CDB3 (EMBL:AL583917) (336 aa) fasta scores: FT E(): 7e-07, 27.58% id in 261 aa, and to Mycobacterium FT tuberculosis hypothetical 35.4 kDa protein Rv3802c or FT MTV026.07c TR:O53581 (EMBL:AL022076) (336 aa) fasta scores: FT E(): 4.2e-06, 27.98% id in 243 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHL7" FT /protein_id="CAE49639.1" FT /translation="MSRAALGIRSSWVGFVAAATTAMASTIAPVAYAQVAHHVPNDGCS FT AVEVAVVGGTTQANIHDDPHDVYSFGKGTNFAVNMTRRFHNVTAWQLPYYSSAGITASN FT NDAEQKEFPPYAVSKNRGVDVLDAHLSDQAVKCPDTQFVIAGFSQGADIAGDMAERISR FT GKTNPALTPERVLGVYLLADPGRSDLPMNPTQGQTTTGKSGPLTDNGAVLIETNLGLPG FT AGSVGIAGPRAAGAFSNLPGKVRSICSSGDPACAVHPKGLLASVGKWANDQNDFEHVPV FT ESVRTMMLNGSFFISLAPHMNKIRGDLYASDPVALKQHFDDASMHPRLTQPERNTLHLV FT GAEIAGLMGHLKQGRDQVAVGSSDTGLSSGGPRDRLIALEKIVQQQTGLVELQLAVGLM FT IVHLSYTGDSREVSTVGAQRADDWIDSDMTQLISGYLNTLSVRAPYVTLGERHTFIQKM FT GWPIWWIVSSIWGQRNHAARGVWEFFGL" FT misc_feature 66434..66532 FT /note="Signal peptide predicted for DIP1119 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.969 between residues 33 and 34" FT misc_feature 67019..67042 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 67981..68262 FT /transl_table=11 FT /locus_tag="DIP1120" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHL6" FT /protein_id="CAE49640.1" FT /translation="MIGSLEQSPLSNGKHSFSSELTGTVTLVSVLSIKRKGGCVAGIEQ FT PEHHGYRVGESSAGTAMIRDSKRQGCANPKLKNNIFSVTSHSCAGMLN" FT CDS 68317..68451 FT /transl_table=11 FT /locus_tag="DIP1121" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHL5" FT /protein_id="CAE49641.1" FT /translation="MLAYETSAQRRELTRSYSDAFLVAHDVDVRDREETFIGHGELTA" FT tRNA 68586..68658 FT /gene="tRNA-Glu" FT /product="transfer RNA-Glu" FT /anticodon=(pos:68620..68622,aa:Glu) FT /note="tRNA Glu anticodon CTC, Cove score 60.15" FT CDS 68836..71544 FT /transl_table=11 FT /gene="ppc" FT /locus_tag="DIP1122" FT /product="phosphoenolpyruvate carboxylase" FT /EC_number="4.1.1.31" FT /note="Similar to Corynebacterium glutamicum FT phosphoenolpyruvate carboxylase Ppc SW:CAPP_CORGL (P12880) FT (918 aa) fasta scores: E(): 8.5e-165, 55.98% id in 927 aa, FT and to Mycobacterium leprae phosphoenolpyruvate carboxylase FT Ppc or ML0578 or B1496_C3_207 SW:CAPP_MYCLE (P46710) (934 FT aa) fasta scores: E(): 1.1e-133, 48.59% id in 924 aa" FT /db_xref="GOA:P61448" FT /db_xref="InterPro:IPR015813" FT /db_xref="UniProtKB/Swiss-Prot:P61448" FT /protein_id="CAE49642.1" FT /translation="MTAAISDRVREDIRLLGRVLGRVIAQQEGEEVYELVEATRRMAFD FT VSHGDADPEDLMVIFRDLDITKTNLVARAFSYFALLANLVEDLDDESVEADVSLRKTFA FT KLKREGVSAADAASVIRSAEVAPVLTAHPTETRRRTVFDTQTRIKQLLKDAHHGGDMQV FT IEQEMYLRMTLLWQTALIRIARPTLEDEIDVGLRYYKKSLLEQVPALNRSIRHSMRETF FT GLQLPDIAVMRPGSWIGGDHDGNPYVNARTLTYATRQAAKTVARYYVEQLGELERELSL FT SDRYSSCSKELLALAEASGNNWESRVDEPYRRAVYGMRARMKSNVDALERPEKTAGKKS FT SKRTPYATPEEFLRDLDVIDRSLRAHNDDVIADDRLARIRSAVTTFGFHLYTLDIRQNS FT ESFEAVIEEVFAAARRVPGGKRYSELAEAEKVELLIQELQTPRPLLFPGALEVEDAFSA FT DTTKELGIFLAAAQAVRDFGSRSIAHCIISMTATVSDILEPMVLLKEVGLRDVDVVPLF FT ETIDDLRCGAAILRELWSHPFYREHLRARGDIQEVMLGYSDSNKDGGYLQANWALYDAE FT LGLVELCREHNIELRLAHGRGGAVGRGGGPTYDAILAQPKGAVSGSVRITEQGEVISAK FT YGAPETARRHLEAFVSGALEASLLDTEPIADPDRAYAIMRDLAGFSGQRYQELVGDPGF FT IEYFTQSTPLHEIGELNLGSRPAARKQTTAISDLRAIPWVLSWSQSRTNIPGWFGVGSA FT VSRFVSAVPEKDRESRWQELRDLYATWPFFRSVMSNMAQVMAKAEISLARLYADLVDDP FT EVADRIYALIAEEFELTRRAYLAITGNEALVSENQRQARSLKRRYPYLLPLNAIQLELL FT RRYRGGDDQFLVSKTIQVTMNGLATALRNAG" FT misc_feature 69214..69255 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 69217..69252 FT /note="ScanRegExp hit to PS00781, Phosphoenolpyruvate FT carboxylase active site 1." FT misc_feature 69361..69411 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 69535..69582 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 69883..71460 FT /note="HMMPfam hit to PF00311, Phosphoenolpyruvate FT carboxylase" FT misc_feature 69991..70053 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 70483..70545 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 70489..70527 FT /note="ScanRegExp hit to PS00393, Phosphoenolpyruvate FT carboxylase active site 2." FT misc_feature 70609..70698 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 71008..71088 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT CDS complement(71554..71943) FT /transl_table=11 FT /locus_tag="DIP1123" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces verticillus PhnA-like FT protein TR:Q9FB32 (EMBL:AF210249) (117 aa) fasta scores: FT E(): 3.3e-20, 56.19% id in 121 aa, and to Escherichia coli FT PhnA protein or B4108 or Z5710 or ECS5090 SW:PHNA_ECOLI FT (P16680) (111 aa) fasta scores: E(): 7.1e-17, 51.28% id in FT 117 aa" FT /db_xref="InterPro:IPR013987" FT /db_xref="UniProtKB/TrEMBL:Q6NHL4" FT /protein_id="CAE49643.1" FT /translation="MTDTQAQGLDTLPPCPECESEYTYEMPPLIVCPECAHEFSTDTAT FT ADPEETSTVIVDSVGNVLSDGDTVSITKTIKVKGAQQPLKSGMKARNIRLKPEVGTGPE FT DHNIECKIDGFGQMILKPAVVKKIV" FT CDS complement(71987..72979) FT /transl_table=11 FT /locus_tag="DIP1124" FT /product="transferase, biotin synthase family" FT /note="Similar to Bacillus subtilis biotin synthase BioB FT SW:BIOB_BACSU (P53557) (335 aa) fasta scores: E(): 1.4e-38, FT 38.19% id in 322 aa, and to Corynebacterium glutamicum FT biotin synthase BioB SW:BIOB_CORGL (P46396) (334 aa) fasta FT scores: E(): 3.1e-31, 35.78% id in 299 aa" FT /db_xref="GOA:Q6NHL3" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHL3" FT /protein_id="CAE49644.1" FT /translation="MTATLNTVQDLEASVLAGTAITRDEALSLIDAPLDELSAAADRIR FT AQMCGDGFDMCSIINAKSGRCPENCTFCAQSIRYPTISVDSYPLITADELVRQAQENKD FT KGVIRFSIVTSGRKLRRDEVRHICEGVRRIKQEVGIEVCISAGLLSAEDFQALHDAGIS FT RVHCNLETSRAYFPSICISHTFDDKIATLQAARDEGMSLCSGGILGLGESMEDRIDMAL FT SARELGVNSFPVNVLVAIEGTPLAGTEQLRPEEVQRCVAIFRFILPQAAIRLAGGRELL FT GDDGKACFQSGANSAISGDMLTTTGTTIASDMALVKDLGYTVTLDHSHS" FT misc_feature complement(72014..72925) FT /note="HMMPfam hit to PF01792, Biotin synthase" FT CDS 73060..73617 FT /transl_table=11 FT /locus_tag="DIP1125" FT /product="Conserved hypothetical protein" FT /note="Similar to Synechocystis sp. hypothetical 21.9 kDa FT protein SLL1660 SWALL:P72810 (EMBL:D90901) (194 aa) fasta FT scores: E(): 2.9e-16, 33.13% id in 166 aa, and to FT Pseudomonas denitrificans hypothetical 19.2 kDa protein in FT cobO 3'region SWALL:YCB8_PSEDE (SWALL:P29941) (175 aa) FT fasta scores: E(): 6.6e-07, 34.24% id in 146 aa" FT /db_xref="GOA:Q6NHL2" FT /db_xref="InterPro:IPR006674" FT /db_xref="UniProtKB/TrEMBL:Q6NHL2" FT /protein_id="CAE49645.1" FT /translation="MISPRLAHAISIAAYAHRNQIRKATSIPYICHPYSVMVIAQSCTC FT DEDVFIAALLHDVLEDAAEEYSEHEMLNDFGPRVVSIVKEVTKDSSLSMWQERADSYLT FT HLETASHEALIVCLADKTHNLMSMVADYEAVGDALWARFNAGKDRQLWWYSSVWDVLER FT RLGKDFPGVADYARLLSMFAKA" FT misc_feature 73132..73461 FT /note="HMMSmart hit to SM00471, Metal dependent FT phosphohydrolases with conserved 'HD' motif." FT CDS complement(73628..74353) FT /transl_table=11 FT /locus_tag="DIP1126" FT /product="Putative IclR-family transcriptional regulator" FT /note="Similar to Mycobacterium tuberculosis probable FT transcriptional regulator Rv2989 or MT3067 or MTV012.03 FT SWALL:AAK47396 (EMBL:AL021287) (267 aa) fasta scores: E(): FT 8.6e-39, 48.26% id in 230 aa, and to Streptomyces FT coelicolor putative transcriptional regulator SC1C2.33c FT SWALL:O86533 (EMBL:AL031124) (238 aa) fasta scores: E(): FT 7.2e-31, 42.24% id in 232 aa" FT /db_xref="GOA:Q6NHL1" FT /db_xref="InterPro:IPR005471" FT /db_xref="UniProtKB/TrEMBL:Q6NHL1" FT /protein_id="CAE49646.1" FT /translation="MGKINTDPAATSGIKVLDRAVSIMLAVAERPLSLTELCDVTNLPR FT ATAHRLATALETHNILTRTSDGKWTIGAVLSSLGAGSSTKLIDVATPIMTSLMNETGES FT VQLYQLAGATRVCIAAQEPTIGLQNTVPVGTRLPLTAGSAAKVFLAYSSPTLRDAMLAS FT GAQFTPEDLEEARDRGWSESISEREVGLASISAPVFDSEGLFIAVLSISGPTERLRPSP FT STLWSQQLTEAAAHLSQSL" FT misc_feature complement(73634..74149) FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator" FT misc_feature complement(73652..74098) FT /note="BlastProDom hit to PD002768, PD002768" FT misc_feature complement(73754..73819) FT /note="ScanRegExp hit to PS01051, Bacterial regulatory FT proteins, iclR family signature." FT misc_feature complement(74057..74314) FT /note="HMMSmart hit to SM00346, helix_turn_helix isocitrate FT lyase regulation" FT CDS 74443..75885 FT /transl_table=11 FT /gene="leuC" FT /locus_tag="DIP1127" FT /product="3-isopropylmalate dehydratase large subunit" FT /EC_number="4.2.1.33" FT /note="Similar to Mycobacterium tuberculosis FT 3-isopropylmalate dehydratase large subunit LeuC or Rv2988c FT or MT3066 or MTV012.02c SWALL:LEU2_MYCTU (SWALL:O53237) FT (473 aa) fasta scores: E(): 2.3e-137, 72% id in 468 aa, and FT to Escherichia coli 3-isopropylmalate dehydratase large FT subunit LeuC or B0072 SWALL:LEU2_ECOLI (SWALL:P30127) (465 FT aa) fasta scores: E(): 2e-111, 61.68% id in 462 aa" FT /db_xref="GOA:Q6NHL0" FT /db_xref="InterPro:IPR015936" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHL0" FT /protein_id="CAE49647.1" FT /translation="MTSPMTSKDSKLTLAEKVWRDHVVSQGEGDQPDLIFIDLQLLHEV FT TSPQAFDGLRMAGRTLRHPELHLATEDHNVPTEGIHNGSLLEINDLVSRTQVETLRKNC FT EEFGVRLHAMGDKKQGIVHQVGPQLGATQPGMTIVCGDSHTSTHGAFGAMAFGIGTSEV FT EHVMATQTLSLKPFKTMAINVTGELQPGVTAKDLILAVIATIGTGGGQGHVIEYRGEAI FT EKLSMEARMTVCNMSIEAGARAGMIAPDETTFDYIKGREMAPTGQDWDDAVAYWKTLPT FT DEGAEFDTEITIDGSAITPFITWGTNPGQGLPLSSVVPSPEDFPGDNEKVAAEKALAYM FT GLTPGTPLRDIAIDTVFLGSCTNARMDDLRIAADILRGRSIADSVRMMVVPSSTMIKEQ FT AEAEGLDKIFIEAGAQWRTAGCSMCLGMNPDQLTPGERCASTSNRNFEGRQGPGGRTHL FT VSPAVAAATAIKGTLASPADLD" FT misc_feature 74479..75855 FT /note="BlastProDom hit to PD000511, PD000511" FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase)" FT misc_feature 74728..74769 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 74806..74832 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 74839..74880 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 74881..74928 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 75067..75108 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 75109..75150 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 75340..75384 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 75499..75549 FT /note="ScanRegExp hit to PS00450, Aconitase family FT signature 1." FT misc_feature 75511..75546 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 75679..75720 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT /note="ScanRegExp hit to PS01244, Aconitase family FT signature 2." FT CDS 75897..76487 FT /transl_table=11 FT /gene="leuD" FT /locus_tag="DIP1128" FT /product="3-isopropylmalate dehydratase small subunit" FT /EC_number="4.2.1.33" FT /note="Similar to Mycobacterium leprae 3-isopropylmalate FT dehydratase small subunit LeuD or ML1684 or MLCB637.33 FT SWALL:LEUD_MYCLE (SWALL:O33124) (198 aa) fasta scores: E(): FT 5e-53, 67.69% id in 195 aa, and to Escherichia coli FT 3-isopropylmalate dehydratase small subunit LeuD or B0071 FT SWALL:LEUD_ECOLI (SWALL:P30126) (201 aa) fasta scores: E(): FT 1.4e-31, 46.7% id in 197 aa" FT /db_xref="GOA:Q6NHK9" FT /db_xref="InterPro:IPR000573" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHK9" FT /protein_id="CAE49648.1" FT /translation="MEKFTTHTGVGVPLTRSNVDTDQIIPAVYLKRVTRTGFEDGLFNN FT WRTKDPNFVLNNEAYRNGSVLVAGPDFGTGSSREHAVWALKDYGFAVVLSSRFADIFRG FT NAGKAGLLAAQMEQTDIELLWKQLEQTPGAQVTVSLEERTVTCEGNVYPFFVDDYTRWR FT LMEGLDDVGLTLRKEAEIAAFEARRPSFKPVTQ" FT misc_feature 75897..76385 FT /note="HMMPfam hit to PF00694, Aconitase C-terminal domain" FT CDS complement(76566..77576) FT /transl_table=11 FT /locus_tag="DIP1129" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML1682 SWALL:Q9CBR8 (EMBL:AL583923) (311 aa) fasta scores: FT E(): 1.4e-40, 42.66% id in 300 aa, and N-terminal region to FT Streptomyces coelicolor putative MutT-like protein FT SCD84.10c SWALL:Q9KZV8 (EMBL:AL353816) (142 aa) fasta FT scores: E(): 4.4e-13, 42.4% id in 125 aa" FT /db_xref="GOA:Q6NHK8" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/TrEMBL:Q6NHK8" FT /protein_id="CAE49649.1" FT /translation="MTSSNKLHEVDKDQQSAFDITGRYQTISAHPTKEFSKPTLAAGAV FT LWRHSSTITENPAVEFAVIHRPHYDDWSLAKGKVDPGESLPVTAEREIREETGHHVHLG FT KLLGKVSYPVGERTKVVYYWIAQVHDEAFEENNEVDELRWLPYTEARELLSYDVDRLVL FT DKAYKRLALPTTTRVILVRHAKAHQRHNWAGNDSIRPLEKKGQRQADLLGPMLAAYGPT FT SIHSATPARCQQTAAPLSELTGLEVVVDDRFDDEAWLSRMTVAQKACEELIATPGTHVV FT VSQGLFIPDAIAWLSAQGRLPLETIEAKKASAWVLSFHEGELTGADYLVSPLGVK" FT misc_feature complement(77070..77465) FT /note="HMMPfam hit to PF00293, MutT-like domain" FT misc_feature complement(77274..77321) FT /note="FPrintScan hit to PR00502, NUDIX hydrolase family FT signature" FT misc_feature complement(77283..77348) FT /note="ScanRegExp hit to PS00893, Nudix hydrolase FT signature." FT misc_feature complement(77319..77363) FT /note="FPrintScan hit to PR00502, NUDIX hydrolase family FT signature" FT CDS 77771..78766 FT /transl_table=11 FT /gene="gpsA" FT /gene_synonym="gpdA2" FT /locus_tag="DIP1130" FT /product="glycerol-3-phosphate dehydrogenase" FT /EC_number="1.1.1.94" FT /note="Similar to Mycobacterium tuberculosis FT glycerol-3-phosphate dehydrogenase GpsA or GpdA2 or Rv2982c FT or MT3060 or MTCY349.05 SWALL:GPDA_MYCTU (SWALL:P95113) FT (334 aa) fasta scores: E(): 8.7e-69, 59.27% id in 329 aa, FT and to Bacillus subtilis glycerol-3-phosphate dehydrogenase FT GpsA or GlyC SWALL:GPDA_BACSU (SWALL:P46919) (345 aa) fasta FT scores: E(): 2.1e-43, 40.78% id in 331 aa" FT /db_xref="GOA:P61738" FT /db_xref="InterPro:IPR006109" FT /db_xref="UniProtKB/Swiss-Prot:P61738" FT /protein_id="CAE49650.1" FT /translation="MKIGVMGAGSWGTTLAKVFSDAGCDVTLWARREEVAREINTEHTN FT STYLRGIALPHTLTATTQPTQALCDADVVVLAVPSQTLRGNLAEWCADIPQDALLLSLA FT KGIEKETFLRMSEVIAEVTGAQPDKVAVLSGPNLAREIAEEQPAATVIACTNEKNAQRI FT QHALAAPYFRPYTNTDVIGCEIGGACKNVIALACGMASGRGLGENTLATLMTRGLAEIS FT RLGVAMGADPRTLSGLAGLGDLVATCSSPLSRNRTFGARLGEGKTLDEARAATNGQVAE FT GVISSQSIARLADSLGVDMPITRAVFGVCHRDQNVADMVAALMGRTKKSE" FT misc_feature 77771..78739 FT /note="HMMPfam hit to PF01210, NAD-dependent FT glycerol-3-phosphate dehydrogenase" FT misc_feature 77777..78730 FT /note="BlastProDom hit to PD001649, PD001649" FT misc_feature 77783..77836 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 77933..78016 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 78164..78226 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 78284..78358 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 78359..78433 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 78479..78532 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 78548..78571 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 78789..79886 FT /transl_table=11 FT /gene="ddl" FT /locus_tag="DIP1131" FT /product="D-alanine--d-alanine ligase" FT /EC_number="6.3.2.4" FT /note="Similar to Mycobacterium smegmatis FT D-alanine--d-alanine ligase Ddl SWALL:DDL_MYCSM FT (SWALL:Q9ZGN0) (373 aa) fasta scores: E(): 1.7e-75, 55.98% FT id in 359 aa, and to Escherichia coli D-alanine--d-alanine FT ligase A DdlA or B0381 or Z0477 or ECS0431 SWALL:DDLA_ECOLI FT (SWALL:P23844) (364 aa) fasta scores: E(): 6e-43, 38.71% id FT in 359 aa" FT /db_xref="GOA:Q6NHK6" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHK6" FT /protein_id="CAE49651.1" FT /translation="MSQNLSAQNSSETPRIKVAIIYGGRSSEHSVSCVSAGAIMAHLDP FT QRYEVFPVGITHDGVWTVGESDPSRLKTVDRVMPEVQFTREVSLSVNPTTAGELCFEDG FT SLYAKVDVVFPVLHGRFGEDGTIQGLFELSGVPYVGTGVLSSACGMDKEFTKKLMAAEG FT LPVGKEVILRGSETLTEEHKRELGLPVFVKPARGGSSIGISRVADWSEWDAALSLAREH FT DSKVIVEAEIVGVEVECGVLERIDGSLMASVPAQLQDTDEGDEGFYGFDTKYLDDVVTA FT HIPAPFDAETTALIQELSLKAFTALSCRGLARVDFFVTDHGPVLNEINTMPGFTPISMY FT PQVFEATGIGYAQLLDNLIEQALHK" FT misc_feature 78834..79868 FT /note="HMMPfam hit to PF01820, D-ala D-ala ligase" FT misc_feature 79140..79175 FT /note="ScanRegExp hit to PS00843, D-alanine--D-alanine FT ligase signature 1." FT misc_feature 79704..79787 FT /note="ScanRegExp hit to PS00844, D-alanine--D-alanine FT ligase signature 2." FT CDS complement(79893..80831) FT /transl_table=11 FT /locus_tag="DIP1132" FT /product="Putative exported protein" FT /note="Similar to Mycobacterium leprae possible secreted FT protein ML1677 TR:Q9CBS1 (EMBL:AL583923) (191 aa) fasta FT scores: E(): 8.9e-13, 32.447% id in 188 aa, and to FT Mycobacterium tuberculosis hypothetical 18.8 kDa protein FT Rv2980 or MTCY349.07c TR:P95115 (EMBL:Z83018) (181 aa) FT fasta scores: E(): 1.5e-09, 31.098% id in 164 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHK5" FT /protein_id="CAE49652.1" FT /translation="MHSDDSFRRGPIVIALVLSIVLVVGVLAGAKLVYDKAAHQPVAMS FT DVGSPLGDSAQCHDFLEALPEHVLGHKRAQIADPAPAGAAAWQSDSTRRVTIRCGVDAP FT LQFTALSERIDAANAEWVEVGDATPGSTLRTWYSVDRFPIVAVTADAEALGEHETPLEE FT LEGAVSVLENKETKPHPIPLTDLQVHAGEEHSATCRALLKSVPDSFGKDITYRKNTTVS FT LPDGSAVWTAAGFEPVVLRCGVEFPKSYKAGERLNQINSVPWFEDTTLRNGTTASTHYA FT LDQKATVAVNLPHEAGNAALVAITEALESIR" FT misc_feature complement(80730..80795) FT /note="1 probable transmembrane helix predicted for DIP1132 FT by TMHMM2.0" FT misc_feature complement(80742..80831) FT /note="Signal peptide predicted for DIP1132 by SignalP 2.0 FT HMM (Signal peptide probability 0.977) with cleavage site FT probability 0.470 between residues 30 and 31" FT misc_feature 80887..92211 FT /note="anomalous G+C content, GC bias and dinucleotide FT signature" FT CDS 80923..81912 FT /transl_table=11 FT /gene="thiL" FT /locus_tag="DIP1133" FT /product="thiamine-monophosphate kinase" FT /EC_number="2.7.4.16" FT /note="Similar to Escherichia coli thiamine-monophosphate FT kinase ThiL or B0417 SW:THIL_ECOLI (P77785) (325 aa) fasta FT scores: E(): 6.4e-12, 32.157% id in 255 aa, and to FT Mycobacterium leprae probable thiamine-monophosphate kinase FT ThiL or ML1676 TR:Q9CBS2 (EMBL:AL583923) (325 aa) fasta FT scores: E(): 1.1e-35, 43.385% id in 325 aa, and to Bacillus FT subtilis thiamine-monophosphate kinase ThiL SW:THIL_BACSU FT (O05514) (325 aa) fasta scores: E(): 1.6e-15, 32.197% id in FT 264 aa" FT /db_xref="GOA:Q6NHK4" FT /db_xref="InterPro:IPR000728" FT /db_xref="UniProtKB/TrEMBL:Q6NHK4" FT /protein_id="CAE49653.1" FT /translation="MTEEHIRNNPTLKEVGEQAAINVITAHAPSSRNGDDAAVLSHAGA FT NSRAVVTTDMLVENRHFRLDWSTPAEIGRKAITQNFADIEAMGARPVAALLAISAPAYT FT RLQFVSDLARGIAERVSDYSAELVGGDITDGDAIVLSVTAVGQLGGSLPELALDRARSG FT HTVIVSGVIGESAAGLALLNRFGRDGVPERFMPLVSAHCATYVPEGRGFVARAAGVSSL FT TDNSDGLIVDLRTMARKSGVVIDLDPSAIQPSALMREAAEILEEDPWHWVLGGGEDHTL FT MGTTAHAVPTGFRKIGTVIKRSNQPTHAAGEVLVGGEAPAYDDGWVSF" FT CDS 81915..82583 FT /transl_table=11 FT /gene="ung" FT /locus_tag="DIP1134" FT /product="uracil-DNA glycosylase" FT /EC_number="3.2.2.-" FT /note="Similar to Mycobacterium tuberculosis uracil-DNA FT glycosylase Ung or Rv2976c or MT3053 or MTCY349.11 FT SW:UNG_MYCTU (P95119) (227 aa) fasta scores: E(): 1.3e-55, FT 64.159% id in 226 aa, and to Bacillus subtilis uracil-DNA FT glycosylase Ung or IPA-57D SW:UNG_BACSU (P39615) (225 aa) FT fasta scores: E(): 5.5e-34, 45.872% id in 218 aa" FT /db_xref="GOA:Q6NHK3" FT /db_xref="HSSP:1AKZ" FT /db_xref="InterPro:IPR018085" FT /db_xref="UniProtKB/TrEMBL:Q6NHK3" FT /protein_id="CAE49654.1" FT /translation="MNNTPLPVHPSWIEPLAPVTDNIHAMGDFLRNEIAQGRGYLPAGS FT DILRAFQYPFDDIKVLIVGQDPYPTPGHAMGLSFSTQPGVRPLPRSLANIFKELSADLG FT IPAPTDGDLTAWSRQGVALFNRVLSVQPGNAGSHRKKGWETITETAIRALAQRNTPLVA FT ILWGKDAQTTQAFLGDTPVITSPHPSPLSASRGFFGSRPFSRANTILEQLGTTPINWEL FT " FT misc_feature 81915..82574 FT /note="BlastProDom hit to PD011327, PD011327" FT misc_feature 81942..82580 FT /note="HMMPfam hit to PF00315, Uracil-DNA glycosylase" FT misc_feature 82035..82580 FT /note="BlastProDom hit to PD001589, PD001589" FT misc_feature 82074..82103 FT /note="ScanRegExp hit to PS00215, Mitochondrial energy FT transfer proteins signature." FT misc_feature 82089..82118 FT /note="ScanRegExp hit to PS00130, Uracil-DNA glycosylase FT signature." FT CDS 82749..84254 FT /transl_table=11 FT /locus_tag="DIP1135" FT /product="Putative kinase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 46.7 kDa protein Rv2974c or MTCY349.13 TR:P95121 FT (EMBL:Z83018) (470 aa) fasta scores: E(): 4e-28, 33.402% id FT in 485 aa, and to Clostridium acetobutylicum predicted FT kinase related to hydroxyacetone kinase YloV ortholog FT CAC1735 TR:AAK79701 (EMBL:AE007682) (547 aa) fasta scores: FT E(): 3.8e-21, 25.690% id in 471 aa" FT /db_xref="GOA:Q6NHK2" FT /db_xref="InterPro:IPR004007" FT /db_xref="UniProtKB/TrEMBL:Q6NHK2" FT /protein_id="CAE49655.1" FT /translation="MPDSDTGSNMAHTMTAAVQQAQGVDNPDDLAAVAMALATGAVKGA FT RGNSGVVLSQVLRGIAHHADSGRIDAHVIQEALRSSLDFVAAAISDPVEGTVITVLRAA FT AIAATNSEDRSLAAVVSVAAHAARIALAETPSQLQVLRDAKVVDAGGQGLVILLDCLEH FT VVTGTATSYDPHIIETTEQQQSHGTSGYLEVMCFIAGVEVSHLHDLLAPLGDCLVIGPI FT SDTSATVHIHSTDAATVISTLYATGTITDLHIEVLPETPKVVHPKRIVLALTPPGDLAQ FT LYTDAGALVVVRDGHHFAIARSTNLGQAETPLADGIEIVNELVARSHQSGAQEVILLPN FT GLLTTQEMAAVERSSQAFKQSITMLPTGSLVRGLAALSVHDPQQSLAVATYAMTEAMSG FT MRTAVIERAEHAALTPAGACAKGDLLVHLGTEPIAVAEQPEEALRIACRRLLDIGGEQI FT LILARKELALTPDNHSLTGPHTDVEINQYDVDRLGALIEIGVE" FT misc_feature 82749..83237 FT /note="HMMPfam hit to PF02734, DAK2 domain" FT CDS 84259..86373 FT /transl_table=11 FT /gene="recG" FT /locus_tag="DIP1136" FT /product="ATP-dependent DNA helicase" FT /EC_number="3.6.1.-" FT /note="Similar to Bacillus subtilis ATP-dependent DNA FT helicase RecG SW:RECG_BACSU (O34942) (682 aa) fasta scores: FT E(): 3.3e-69, 33.862% id in 694 aa, and to Escherichia coli FT ATP-dependent DNA helicase RecG or B3652 SW:RECG_ECOLI FT (P24230) (693 aa) fasta scores: E(): 8.9e-63, 34.765% id in FT 722 aa" FT /db_xref="GOA:Q6NHK1" FT /db_xref="InterPro:IPR018228" FT /db_xref="UniProtKB/TrEMBL:Q6NHK1" FT /protein_id="CAE49656.1" FT /translation="MLGWHDQRPLAQLLPAKEAKAFSRHFSFTTVEDLLQHFPRGYAAH FT GTGLAAEAAEEGDIITCVGTIVDTHEHPDRNGYSIYSVVISDGFTRSTATFFRATWIKK FT VLTHGAQGIFTGKLKFFRNTPQLQHPDFFLFPEKGKKATGTGGMQALSTTGELDDITDI FT LVAMSYLPVYPAKKAIPTWRILGAVHNILTHTPHIADPLHEFAPHDLPSFDQALRGIHE FT PDEHGPQHYITRIKYDEALTLALVMALRRADTQRRHAYPIPPTNDGLRAHMLSHLPFEL FT TEGQHNVLTEISADLAQPTPMSRLLQGEVGSGKTIVSLLAMLQVIDDGKQCVLLAPTEV FT LAAQHATSITQQLTNAGININVTLLTGSLPTEQRRKALFNIISGDANLIIGTHALIQEG FT IEFFDLALCVIDEQHRFGVEQRDHLRNQGRDTNTPHVLVMTATPIPRSIAMTAFGDLSV FT STLKQLPGGRRPIHSYVIDHQHTTWTTRMWERIREEIDKGHQIYIVCPKIKDSGGVEET FT THQLTTGILANYRIAMLHGAMHPEDKDTTMKAFAAGTIDVLVATTVIEVGIDVPNATVM FT LIRESENFGVSQLHQLRGRVGRGGNESICFFHTTAQPTTPAHNRVTAVAATTDGFELAE FT IDLTYRHEGNILGTQQSGHTNRIISFIHDKDLIERANNDATHIVTHNPQLARHLVADID FT DTTQTYIDKS" FT misc_feature 84454..84480 FT /note="ScanRegExp hit to PS01137, TatD deoxyribonuclease FT family signature 1." FT misc_feature 85072..85650 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 85087..85674 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 85180..85203 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 85252..86052 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 85411..85443 FT /note="ScanRegExp hit to PS00435, Peroxidases proximal FT heme-ligand signature." FT misc_feature 85801..86058 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT CDS 86401..86622 FT /transl_table=11 FT /locus_tag="DIP1137" FT /product="Putative biotin carboxyl carrier protein" FT /note="Similar to C-terminus of Mycobacterium smegmatis FT pyruvate carboxylase Pyc TR:Q9F843 (EMBL:AF262949) (1127 FT aa) fasta scores: E(): 1.9e-05, 47.761% id in 67 aa, to FT Bacillus subtilis YngXX TR:Q9R9I3 (EMBL:AF184956) (73 aa) FT fasta scores: E(): 0.0043, 36.765% id in 68 aa, and to FT Propionibacterium freudenreichii shermanii biotin carboxyl FT carrier protein of methylmalonyl-CoA carboxyl- transferase FT SW:BCCP_PROFR (P02904) (123 aa) fasta scores: E(): 0.0079, FT 38.806% id in 67 aa" FT /db_xref="InterPro:IPR000089" FT /db_xref="UniProtKB/TrEMBL:Q6NHK0" FT /protein_id="CAE49657.1" FT /translation="MKICAPFAGIVHYKVSLGDTVTTGQELASVEATKLEAPIIAPGPG FT IVAEITSSDFDDVVGGDVILRVVSQEKP" FT misc_feature 86401..86601 FT /note="HMMPfam hit to PF00364, Biotin-requiring enzyme" FT CDS 86619..87197 FT /transl_table=11 FT /locus_tag="DIP1138" FT /product="Putative DNA methylase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 19.8 kDa protein Rv2966c or MTCY349.21 TR:P95128 FT (EMBL:Z83018) (188 aa) fasta scores: E(): 2.6e-22, 42.703% FT id in 185 aa, and to Streptomyces coelicolor putative FT methylase SC7A1.11 TR:Q9ZBR2 (EMBL:AL034447) (195 aa) fasta FT scores: E(): 1.2e-21, 44.505% id in 182 aa" FT /db_xref="GOA:Q6NHJ9" FT /db_xref="InterPro:IPR018254" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ9" FT /protein_id="CAE49658.1" FT /translation="MTRIISGEARGRTIKVPEHGTRPTSDRAREGLFSSLQVRFGFAGA FT RVLDLFAGSGALGLEAASRGAESVVLVENNPKAVAVIRHNIAVVGHPHVDVVEMKASTY FT VASAPKNHFDMVLADPPYDLDDQAVVEMLHALIPTLVDGAAVVVERHRDSSETAWPACF FT VPTTQKLKKRTFGIARMDMAVFHAELVEE" FT misc_feature 86754..87071 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 86841..86885 FT /note="ScanRegExp hit to PS00579, Ribosomal protein L29 FT signature." FT misc_feature 86964..86984 FT /note="ScanRegExp hit to PS00092, N-6 Adenine-specific DNA FT methylases signature." FT CDS 87205..87684 FT /transl_table=11 FT /gene="coaD" FT /gene_synonym="kdtB" FT /locus_tag="DIP1139" FT /product="phosphopantetheine adenylyltransferase" FT /EC_number="2.7.7.3" FT /note="Similar to Mycobacterium tuberculosis FT phosphopantetheine adenylyltransferase CoaD or KdtB or FT Rv2965c or MT3043 or MTCY349.22 or u0002E SW:COAD_MYCTU FT (Q50452) (161 aa) fasta scores: E(): 3e-32, 54.717% id in FT 159 aa, and to Mycobacterium leprae phosphopantetheine FT adenylyltransferase CoaD or KdtB or ML1663 or MLCB1243.10 FT SW:COAD_MYCLE (O69466) (160 aa) fasta scores: E(): 3.4e-31, FT 54.777% id in 157 aa" FT /db_xref="GOA:Q6NHJ8" FT /db_xref="HSSP:1B6T" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHJ8" FT /protein_id="CAE49659.1" FT /translation="MRKAVCPGSFDPVTMGHLDIIGRAAQQYDEVTVLVTANPNKPSGM FT FTVDERLALIKESTAHFVNVKVDNWAGLLVDYTTANGIDAIVKGLRTALDYEYELPMAQ FT MNRKLAGVDTLFLMTDPQYGYISSTLCKEVTKYGGDVSDMLPPAVAAAIVEKVKS" FT misc_feature 87205..87603 FT /note="HMMPfam hit to PF01467, Cytidylyltransferase" FT misc_feature 87208..87264 FT /note="FPrintScan hit to PR01020, Lipopolysaccharide core FT biosynthesis protein signature" FT misc_feature 87262..87327 FT /note="FPrintScan hit to PR01020, Lipopolysaccharide core FT biosynthesis protein signature" FT misc_feature 87460..87510 FT /note="FPrintScan hit to PR01020, Lipopolysaccharide core FT biosynthesis protein signature" FT misc_feature 87538..87606 FT /note="FPrintScan hit to PR01020, Lipopolysaccharide core FT biosynthesis protein signature" FT CDS 87771..87929 FT /transl_table=11 FT /locus_tag="DIP1140" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ7" FT /protein_id="CAE49660.1" FT /translation="MALVVFGATYLPPTRGKIPAIVAGIAGGFMNTLAGAAGPAITVYA FT QALKWDQ" FT misc_feature 87771..87905 FT /note="Signal peptide predicted for DIP1140 by SignalP 2.0 FT HMM (Signal peptide probability 0.860) with cleavage site FT probability 0.743 between residues 45 and 46" FT misc_feature 87831..87899 FT /note="1 probable transmembrane helix predicted for DIP1140 FT by TMHMM2.0" FT CDS 88059..88232 FT /transl_table=11 FT /locus_tag="DIP1141" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ6" FT /protein_id="CAE49661.1" FT /translation="MFLGISLGARASKMVSRTHARKLALLLATGGGVSAVVRGLTGIQE FT RVPHDRNSRGAP" FT misc_feature 88059..88163 FT /note="Signal peptide predicted for DIP1141 by SignalP 2.0 FT HMM (Signal peptide probability 0.844) with cleavage site FT probability 0.333 between residues 35 and 36" FT CDS complement(88253..89020) FT /transl_table=11 FT /gene="atrC" FT /locus_tag="DIP1142" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor ATP-binding FT protein AtrC SWALL:Q9F3K7 (EMBL:AL391763) (253 aa) fasta FT scores: E(): 5.1e-58, 68% id in 250 aa, and to Rhizobium sp FT TAL1145 MidC SWALL:Q9EYT0 (EMBL:AF312768) (265 aa) fasta FT scores: E(): 1.9e-52, 60.78% id in 255 aa" FT /db_xref="GOA:Q6NHJ5" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ5" FT /protein_id="CAE49662.1" FT /translation="MTDNLMIDAQKLCKNYGQLSVLKGIDLQVPQGTVTCLIGPSGSGK FT STLLRCVNHLEKISGGRLYVDGELIGYRERGGVLYEISEKEAARQRSGIGMVFQNFNLF FT PHRTVIENIIEAPVHVKGVSESEARSRGMALLKQVGLEHKADAYPAQLSGGQQQRVAIA FT RAVAMEPKLMLFDEPTSALDPELVGEVLRVMRELAQGGMTMLVVTHEMGFAREVADTVA FT FMDGGVIVEQGPAEQVIDNPQHERTKAFLSSLL" FT misc_feature complement(88337..88930) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(88340..88927) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(88352..88567) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(88523..88567) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(88865..88921) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(88883..88906) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(89024..89968) FT /transl_table=11 FT /locus_tag="DIP1143" FT /product="Putative ABC transport system membrane protein" FT /note="Similar to Streptomyces coelicolor permease AtrB FT SWALL:Q9F3K6 (EMBL:AL391763) (316 aa) fasta scores: E(): FT 7.1e-49, 50.72% id in 276 aa, and to Rhizobium meliloti FT putative amino acid uptake ABC transporter permease protein FT RB0674 or SMB21095 SWALL:CAC49074 (EMBL:AL603644) (290 aa) FT fasta scores: E(): 3.5e-37, 42.96% id in 263 aa" FT /db_xref="GOA:Q6NHJ4" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ4" FT /protein_id="CAE49663.1" FT /translation="MTSPQPIQAKPLRHPGRWVAAIIILALFVWFLISAATNDAYGWDI FT YRQYLFDTRIASAAVHTLAITILSMLMGVVLGCIVAIMRMSPNPVLRGISWFYLWIFRG FT TPVYVQLVFWGLLGSIYSGINLGFTEISLENLLSNMFILAVVGLGLNEAAYMSEIVRSG FT IQAVPEGQTEASKALGMSWWMTIRRTVLPQAMRIIVPPTGNEFISLLKTTSLVVAIPYT FT SELYGRATDIAAALFDPVPLLLVAATWYLVITSLLMVAQHYLEKYYDRGATRQLTARQL FT AALADAEGTLPKNVDIIAETPKPHTPRTPKKGA" FT misc_feature complement(order(89177..89242,89498..89563,89585..89650, FT 89729..89794,89858..89923)) FT /note="5 probable transmembrane helices predicted for FT DIP1143 by TMHMM2.0" FT misc_feature complement(89267..89482) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT misc_feature complement(89393..89479) FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT misc_feature complement(89642..89689) FT /note="ScanRegExp hit to PS00225, Crystallins beta and FT gamma 'Greek key' motif signature." FT misc_feature complement(89864..89968) FT /note="Signal peptide predicted for DIP1143 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.477 between residues 35 and 36" FT CDS complement(90026..90919) FT /transl_table=11 FT /locus_tag="DIP1144" FT /product="Putative secreted protein" FT /note="Similar to Rhizobium spTAL1145 MidA SWALL:Q9EYT2 FT (EMBL:AF312768) (281 aa) fasta scores: E(): 4.6e-18, 30.36% FT id in 247 aa, and to Escherichia coli glutamine-binding FT periplasmic protein precursor GlnH or B0811 or Z1033 or FT ECS0889 SWALL:GLNH_ECOLI (SWALL:P10344) (248 aa) fasta FT scores: E(): 1.1e-13, 30.55% id in 252 aa" FT /db_xref="GOA:Q6NHJ3" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ3" FT /protein_id="CAE49664.1" FT /translation="MTIRSHVVAICATVALALPLTACVTNEEQGHPDSWVEVTPAAVPE FT IAAMVPQDLADRGTLVAGANPPFAPFEFKDSNHNIIGMEMDLMQAISAVMGLKYEAQQQ FT DFSLILPSLSAGTIDVGASGFTDNDERRENYDFVDFLYAGIQWGVQKDSSVSRENPCGL FT TIAVQRTTVAETDDAHPLREKCIAEGKKPVEILPYATSDQAATALVLGRADVFSADSPV FT VGWAVERAEGKLTTTGEIFDAAPYGFAVPKGSPLGPAIAAALEHLIKTGDYQKILNMWG FT VKEGYVEQGMINEKPI" FT misc_feature complement(90068..90745) FT /note="HMMSmart hit to SM00062, Bacterial periplasmic FT substrate-binding proteins" FT misc_feature complement(90071..90742) FT /note="HMMPfam hit to PF00497, Bacterial extracellular FT solute-binding proteins, family 3" FT misc_feature complement(90158..90712) FT /note="ProfileScan hit to PS50121, Solute binding FT protein/glutamate receptor domain." FT misc_feature complement(90830..90919) FT /note="Signal peptide predicted for DIP1144 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.626 between residues 30 and 31" FT CDS complement(90989..91921) FT /transl_table=11 FT /locus_tag="DIP1145" FT /product="Putative membrane protein" FT /note="Similar to Vibrio cholerae hypothetical protein FT VCA0040 SWALL:Q9KNC5 (EMBL:AE004347) (308 aa) fasta scores: FT E(): 3.4e-22, 31.48% id in 270 aa, and to FT Methanothermobacter thermautotrophicus hypothetical 35.5 FT kDa protein MTH465 SWALL:O26565 (EMBL:AE000831) (319 aa) FT fasta scores: E(): 2.9e-18, 31.12% id in 241 aa" FT /db_xref="InterPro:IPR007163" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ2" FT /protein_id="CAE49665.1" FT /translation="MTSPVKANTNKTRPINAVINVVFGALIGLAELVPGVSGGTVALVA FT GIYERAIHNGNALVHIVRVLISDRSQLKTSIKSVEWGFLASVAVGMIGAVFTMSSVMHH FT FVDHHPITARALFLGMVSVSIVVPLRMIRAESLSSQKLPALLLFVFGAIATFFATSMTS FT EPKTDPSLLIVFFVAMVAVCALVLPGVSGSFILLALGFYEPIIQAVSDRNFTIIAVFAA FT GAITGLACFIKVLDVLMTRHHTLTLATMAGMMLGSLRALWPWQTDNADLLWPPAGSGTT FT FGFIALGAVVVACVVLAEILLERKNSHHK" FT misc_feature complement(order(91019..91084,91130..91195,91217..91282, FT 91343..91408,91445..91495,91526..91591,91613..91678, FT 91793..91858)) FT /note="8 probable transmembrane helices predicted for FT DIP1145 by TMHMM2.0" FT misc_feature complement(91808..91921) FT /note="Signal peptide predicted for DIP1145 by SignalP 2.0 FT HMM (Signal peptide probability 0.638) with cleavage site FT probability 0.222 between residues 38 and 39" FT tRNA complement(92138..92211) FT /gene="tRNA-Leu" FT /product="transfer RNA-Leu" FT /anticodon=(pos:92175..92177,aa:Leu) FT /note="tRNA Leu anticodon CAA, Cove score 39.37" FT CDS 92283..94982 FT /transl_table=11 FT /gene="polA" FT /locus_tag="DIP1146" FT /product="DNA polymerase I" FT /note="Similar to Streptomyces griseus DNA polymerase I FT PolA SWALL:Q9F179 (EMBL:AF051319) (889 aa) fasta scores: FT E(): 0, 72.61% id in 891 aa, and to Bacillus caldotenax DNA FT polymerase I PolA SWALL:DPO1_BACCA (SWALL:Q04957) (877 aa) FT fasta scores: E(): 2.3e-119, 41.5% id in 901 aa" FT /db_xref="GOA:Q6NHJ1" FT /db_xref="HSSP:1KFS" FT /db_xref="InterPro:IPR008918" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ1" FT /protein_id="CAE49666.1" FT /translation="MLDVLVTLAIVTSNANRLMLIDGHSMAFRAFYALPAENFSTSGGQ FT ATNAVYGFLSMLSSLLVEEKPTHVAVAFDVGRQTFRTEMFPEYKAQREAAPPEFKGQVE FT IIKEVLETLGITTLEKENFEADDIIATLATAAGPLGFDTYIVTGDRDSFQLVNESTTVL FT YPMRGVSVLHRFTPEAVEEKYGLTPVQYPDFAALRGDPSDNLPNIPGVGEKTATKWIVQ FT YGNLDSLLAHADEIKGKAGNSFRERLDQVRMNRTLTEMIKDLELPYAPDQLERKPADAS FT AIASKFDELEFGSNLRDRVIHAVDAQGNVSEESEEYKPEVVIDHEKLASWLATRAGQSL FT ALYVRGHGSPASGDAESAAIVDKQFHAVAFDFGDLDADDDQAFAQWIASDSPKYLHEAK FT AVFHMLAGRGYTLNGIEHDTAIAGYLLRPGQRTYDLKDVYQRHLQRQLGGGSSESGQLS FT LLDAPDAQELVDSAVAILELSKSLTAQLQAIDAYELYREMELPLVGVLARMEATGICVD FT VATLREQRDIFVEQVKEEESAARELAGDETLNLSSPKQLQVVLFDTLGLPKTKKTKTGY FT STAAKEIESLAVKNPHPFLDHLLAHREFQKMKTTLDGLIKAVGDDGRIHTTFNQTVAST FT GRLSSTEPNLQNIPVRTPAGRKIRSAFVVGQGYKSLLTADYSQIEMRVMAHLSEDPGLI FT EAYQTGEDLHNFVGSKVFDVPVDQVTPELRRRVKAMSYGLVYGLSAFGLSQQLNIPAGE FT AKVIMESYFERFGGVKRYLDQVVEQARKDGFTSTLFGRRRYLPELSSDNRVARENAERA FT ALNAPIQGTAADIIKIAMLRVDARLTAENCQSRVLLQVHDELVLEVASGEQEKVQQLVE FT EEMDAAISLRVPLEVSAGVGTNWEEAAH" FT misc_feature 92328..92834 FT /note="HMMPfam hit to PF02739, 5'-3' exonuclease, FT N-terminal resolvase-like domain" FT misc_feature 92328..93110 FT /note="HMMSmart hit to SM00475, 5'-3' exonuclease" FT misc_feature 92334..92558 FT /note="ProfileScan hit to PS50182, 5'3'-Exonuclease FT N-domain." FT misc_feature 92571..92954 FT /note="ProfileScan hit to PS50183, 5'3'-Exonuclease FT I-domain." FT misc_feature 92838..93137 FT /note="HMMPfam hit to PF01367, 5'-3' exonuclease, FT C-terminal SAM fold" FT misc_feature 92844..92951 FT /note="HMMSmart hit to SM00279, Helix-hairpin-helix class 2 FT (Pol1 family) motifs" FT misc_feature 93237..93743 FT /note="HMMSmart hit to SM00474, 3'-5' exonuclease" FT misc_feature 93828..94973 FT /note="HMMPfam hit to PF00476, DNA polymerase family A" FT misc_feature 94152..94220 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 94221..94268 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 94245..94868 FT /note="HMMSmart hit to SM00482, DNA polymerase A domain" FT misc_feature 94290..94361 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 94380..94421 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 94452..94511 FT /note="ScanRegExp hit to PS00447, DNA polymerase family A FT signature." FT misc_feature 94452..94529 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 94563..94598 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 94629..94664 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 94725..94775 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 94815..94856 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT CDS complement(95032..95799) FT /transl_table=11 FT /locus_tag="DIP1147" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 24.3 FT kDa protein SC7H2.13 SWALL:Q9S2K4 (EMBL:AL109732) (220 aa) FT fasta scores: E(): 1.4e-39, 50% id in 216 aa, and to FT Bacillus halodurans BH0355 protein SWALL:Q9KFW5 FT (EMBL:AP001508) (246 aa) fasta scores: E(): 1.3e-10, 28.51% FT id in 242 aa" FT /db_xref="GOA:Q6NHJ0" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q6NHJ0" FT /protein_id="CAE49667.1" FT /translation="MMNISHKDHHNDQEISDANRDWWDSDAQRYHNDHAAYLNGFHWCP FT EMLPEREAHLLGDISGLNVLEIGCGSAPCSRWLFDNYDAFVTGFDLSMGMLRHSPTDVP FT LTQADAVNLPYKDSSFDIAFSAFGAFPFIENLGPVLKDIARCLKPHGKLVFSTNHPMRW FT IFPDDPTEIGLCAELSYFDRSYTERDKNGKITYAEFHRTMGDWIELLNASGFIIDRLIE FT PEWPTNLTETWGQWSPLRGRIFPGTAIFVTHCR" FT misc_feature complement(95326..95631) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT CDS 96010..97470 FT /transl_table=11 FT /gene="rpsA" FT /locus_tag="DIP1148" FT /product="30S ribosomal protein S1" FT /note="Similar to Corynebacterium ammoniagenes 30s FT ribosomal protein S1 RpsA SWALL:Q9LBD0 (EMBL:AF045481) (489 FT aa) fasta scores: E(): 6e-160, 92.18% id in 486 aa, and to FT Escherichia coli 30S ribosomal protein S1 RpsA or SsyF or FT B0911 or Z1257 or ECS0994 SWALL:RS1_ECOLI (SWALL:P02349) FT (557 aa) fasta scores: E(): 2.9e-52, 44.97% id in 358 aa" FT /db_xref="GOA:Q6NHI9" FT /db_xref="InterPro:IPR003029" FT /db_xref="UniProtKB/TrEMBL:Q6NHI9" FT /protein_id="CAE49668.1" FT /translation="MPTNNVPQVAINDIGTAEDFLAAVDATIKYFNDGDIVEGTVVKVD FT HDEVLLDIGYKTEGVIPSRELSIKHDVDPDEVVEVGDQIDALVLTKEDKEGRLILSKKR FT AQYERAWGAIEELKEKDEPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLDPYI FT GQQIEAKIIELDKQRNNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGA FT FVDLGGVDGLVHVSELSWKHIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDP FT WRVFARTHAVGQIVPGRVTKLVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVNVGD FT EAMVKVIDIDLERRRISLSLKQADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETN FT EWLEGFDEQRQAWEARYAESERRFQLHTVQIEKNRVAAAEAAAAGEATNYSSESAEAAP FT AAANTEAEGGSLASDEQLAALREKLAGN" FT misc_feature 96097..96318 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 96103..96318 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 96109..96165 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 96109..96318 FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature 96163..96207 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 96307..96366 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 96358..96567 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 96364..96567 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 96370..96567 FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature 96379..96429 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 96430..96483 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 96517..96579 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 96616..96834 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 96622..96834 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 96628..96834 FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature 96688..96753 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 96871..97092 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 96877..97092 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 96883..97092 FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature 96922..96981 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 97039..97095 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 97315..97443 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT stem_loop 97493..97533 FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(97554..98966) FT /transl_table=11 FT /locus_tag="DIP1149" FT /product="Putative transport protein" FT /note="Similar to Pasteurella multocida hypothetical FT protein PM0933 SWALL:Q9CMA1 (EMBL:AE006132) (462 aa) fasta FT scores: E(): 9.1e-43, 32.62% id in 469 aa, and to FT Escherichia coli anaerobic C4-dicarboxylate transporter FT DcuC or B0621 or Z0766 or ECS0660 SWALL:DCUC_ECOLI FT (SWALL:Q47134) (461 aa) fasta scores: E(): 9.6e-19, 31.76% FT id in 466 aa" FT /db_xref="GOA:Q6NHI8" FT /db_xref="InterPro:IPR018385" FT /db_xref="UniProtKB/TrEMBL:Q6NHI8" FT /protein_id="CAE49669.1" FT /translation="MLYLLIALISFAAVMYLIIKKVNAAAAIFFVGVLLLMIAAISGKA FT EPSVEIKPSGNSFYDELLVIEALFKSRFSGIGMAIMVLFGFVSYMRTIGADAKAVVLLS FT APLQKMRGSYWMVPIGFTIGTALSLIVPSASALSLLLVATLLPALVAAGLTPLTVAAII FT VTSSTIVATPLEAGLIQGADLVGMPISEYVYGNVAKATIPTLVITAFVHMAWQHHCDKV FT DARKSALPTSDAPSIQHDTSAVDDALRRAAGLPAYYALLPLLPLLLILVTAVLHRADLL FT SFEAGILPVTIVSLFISLIIEAIRHRSLMNALETVKLFFKGMGEGAAGVVALLVAAAVL FT VEGVTQLGVIDMLINATEGSSGATVIIILAFVASTALMSALTGSGTAPYFAFSEVVPSL FT AAQTGVLPVQMLTAIWGTSNLMRQVSPVNAAVIIVSTAINVSPIKLVKRTSVPMIVATI FT LNVVFAFLFIHV" FT misc_feature complement(order(97560..97616,97638..97688,97734..97799, FT 97821..97886,97917..97982,98046..98111,98142..98207, FT 98322..98387,98475..98540,98556..98621,98682..98747, FT 98838..98894,98910..98966)) FT /note="13 probable transmembrane helices predicted for FT DIP1149 by TMHMM2.0" FT CDS complement(99186..100013) FT /transl_table=11 FT /locus_tag="DIP1150" FT /product="Putative transcription antiterminator" FT /note="Similar to Bacillus subtilis transcription FT antiterminator LicT or N15A SWALL:LICT_BACSU (SWALL:P39805) FT (277 aa) fasta scores: E(): 2.6e-20, 28.72% id in 275 aa, FT and to Escherichia coli cryptic beta-glucoside Bgl operon FT antiterminator BglG or BglC or B3723 SWALL:BGLG_ECOLI FT (SWALL:P11989) (278 aa) fasta scores: E(): 1.4e-18, 27.33% FT id in 278 aa" FT /db_xref="GOA:Q6NHI7" FT /db_xref="HSSP:1AUU" FT /db_xref="InterPro:IPR011608" FT /db_xref="UniProtKB/TrEMBL:Q6NHI7" FT /protein_id="CAE49670.1" FT /translation="MQILRVFNNNVVLARRDDEEVIVTGRGLGFQAKTGDDVDPTKVVR FT VFVPADGRDPDHSALMLAAIPGEYIRLVLEAMERAGLSEKLRSTLTLVIALADHVHAAS FT TRTKSVEYPLEAEVRHLYAEDFHSAQRLLKEINSELQRPLHEAEAIALTLHIVNAGFSV FT GDLSGTYRMTGLIEQLLEIIGGFYGTTLSGEDISVARFITHLRYLFVRMAEHKQLDSPT FT ARVASTIAEQYPTAAQCAEALSAIIELRMNAPLTAEEVSYLTLHVARLGADNR" FT misc_feature complement(99537..99815) FT /note="HMMPfam hit to PF00874, Transcriptional FT antiterminator bglG family" FT misc_feature complement(99840..100013) FT /note="HMMPfam hit to PF03123," FT CDS complement(100125..102155) FT /transl_table=11 FT /gene="ptsG" FT /locus_tag="DIP1151" FT /product="PTS system, glucose-specific IIABC component" FT /EC_number="2.7.1.69" FT /note="Similar to Corynebacterium glutamicum PTS system, FT glucose-specific IIABC component PtsG SWALL:PTGA_CORGL FT (SWALL:Q45298) (674 aa) fasta scores: E(): 2.8e-59, 44.91% FT id in 688 aa, and to Staphylococcus xylosus PTS system, FT sucrose-specific IIBC component ScrA SWALL:PTSB_STAXY FT (SWALL:P51184) (480 aa) fasta scores: E(): 8e-26, 27.73% id FT in 494 aa" FT /db_xref="GOA:Q6NHI6" FT /db_xref="HSSP:1AX3" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:Q6NHI6" FT /protein_id="CAE49671.1" FT /translation="MSTQTREDTARAILDGIGGASNITSFTHCATRLRFELADASKVDK FT AALDSIPKVMGAVPQGGRNYQVVIGGDVANVYDDMTHLPEMKSAAPSDADIKAAARAKS FT KGKLPWMDSFFEYLSDSFRPILGVLLGASLIIAFTAVLDAFHIVDFRADDKSASWVFVD FT AMWRSVFYFLPVMVAFNAGKKLRIDPWVPAAIMFALFTPEFLGLKESSTAECVTNAALG FT TETCHAPIFGINMTFPDYGGNVFVPLIMAAVAAVVYKGFQKVIPTAVHMVFVPFLTLVI FT MIPVTAFIIGPFGTWAGNGIGLGLSWMNENAPFVFALAIPLLYPFLVPLGLHWPLNALM FT LINIQTLGYDFIQGPMGTWNFACFGATAGVLALSIRDKDTVMRQTAGSALAAGLLGGIS FT EPSLYGIHLRFKRVYPRMLAGCFAGGLTIAVLSTIFEPVTTNAFVFTSIPTMFVFNPAW FT IYMVSILVAFTVAFLAIFITDYRTTEEKAEFFARRDSADDVPAATVPSATTPAPAAAAA FT NPAGECKVGSPISGEVLPMAEIADPVFSAGTLGDGVGVNPTATAGAGTEVYSPVSGTVK FT SAMKSGHAYGIKTDDGVEVLVHIGIDTVQMKGEGFTPAVQKGDRVEAGQKLATVDYDKV FT RAAGYGTTIVVAVTNTKAMKAVTPTGVKHAGAGDTIFTVTQ" FT misc_feature complement(100206..100535) FT /note="BlastProDom hit to PD002243, PD002243" FT /note="HMMPfam hit to PF00358, FT phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 1" FT misc_feature complement(100344..100382) FT /note="ScanRegExp hit to PS00371, PTS EIIA domains FT phosphorylation site signature 1." FT misc_feature complement(order(100725..100790,100836..100901, FT 101037..101102,101148..101213,101274..101339, FT 101385..101435,101619..101684,101715..101780)) FT /note="8 probable transmembrane helices predicted for FT DIP1151 by TMHMM2.0" FT misc_feature complement(100896..101804) FT /note="HMMPfam hit to PF02378, Phosphotransferase system, FT EIIC" FT misc_feature complement(102024..102128) FT /note="BlastProDom hit to PD001476, PD001476" FT /note="HMMPfam hit to PF00367, phosphotransferase system, FT EIIB" FT misc_feature complement(102039..102092) FT /note="ScanRegExp hit to PS01035, PTS EIIB domains cysteine FT phosphorylation site signature." FT CDS 102537..103139 FT /transl_table=11 FT /gene="coaE" FT /locus_tag="DIP1152" FT /product="dephospho-CoA kinase" FT /EC_number="2.7.1.24" FT /note="Similar to Corynebacterium glutamicum dephospho-CoA FT kinase CoaE SWALL:COAE_CORGL (SWALL:P56187) (195 aa) fasta FT scores: E(): 7.6e-25, 50.81% id in 185 aa, and to FT Escherichia coli dephospho-CoA kinase CoaE or B0103 or FT Z0113 or ECS0107 SWALL:COAE_ECOLI (SWALL:P36679) (206 aa) FT fasta scores: E(): 2.4e-15, 38.37% id in 185 aa" FT /db_xref="GOA:Q6NHI5" FT /db_xref="InterPro:IPR001977" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHI5" FT /protein_id="CAE49672.1" FT /translation="MRIIGLTGGIGSGKSTVARIWQGCGAIVIDADAIARVLMEPGSTV FT LEEVSQVFGRDLLDAEGKLRRAELAARAFISEEKTAQLNSITHPAIRRQIRRGIECARA FT EGVQVLVLDHPLLFESGMSDLVDDVVVVDVPAELRVRRLVDLRGLKEEDARHRIMRQMS FT DEDRRMRADYVIDNSGSRDVLERLARELWQRFATQVE" FT misc_feature 102540..103085 FT /note="HMMPfam hit to PF01121, Dephospho-CoA kinase" FT misc_feature 102558..102581 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 102720..102809 FT /note="ScanRegExp hit to PS01294, Dephospho-CoA kinase FT signature." FT misc_feature 102759..102824 FT /note="Predicted helix-turn-helix motif with score 1411 FT (+3.99 SD) at aa 84-105, sequence ISEEKTAQLNSITHPAIRRQIR" FT CDS 103359..104558 FT /transl_table=11 FT /locus_tag="DIP1153" FT /product="Putative coenzyme PQQ synthesis related protein" FT /note="Similar to Archaeoglobus fulgidus coenzyme PQQ FT synthesis protein AF2413 SWALL:O30258 (EMBL:AE001109) (375 FT aa) fasta scores: E(): 1.1e-54, 40.79% id in 375 aa, and to FT Methylobacterium extorquens coenzyme PQQ synthesis protein FT E PqqE SWALL:PQQE_METEX (SWALL:P71517) (384 aa) fasta FT scores: E(): 1e-05, 24.67% id in 381 aa" FT /db_xref="GOA:Q6NHI4" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/TrEMBL:Q6NHI4" FT /protein_id="CAE49673.1" FT /translation="MPHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHCRA FT DAQHEPHPEQLTTEQGKQLLSDLASYERPKPLVVLTGGDPFERQDLEELVDYGTSLGLN FT VSLSPSVTPRLTPERIHRLYELGGKAMSMSLDGATAETHDAFRGFSGTFDTTVKRAADI FT LQAGFRLQINSTLTKSNIREAPALLKTVMGMGAKMWYVFFLVPTGRGAALNALNPQERE FT DVLHWLADVSDRIAIKTTEAPQYRRVVIQQRLRKEGQLDKYQGGELYRYLTQKTTELLG FT AHPVQPRRPRPPMAVNSGSGFVFIDHIGDVYPSGFLPIHCGNVKQASIKTIYSQSPTFQ FT ALRDPNHWHGKCSVCEFHDVCGGSRSTAYALTGDVRASDPTCVYMPQPWLDAGHSGVED FT " FT misc_feature 103560..104309 FT /note="HMMPfam hit to PF01444, moaA / nifB / pqqE family" FT CDS 104659..106704 FT /transl_table=11 FT /gene="uvrB" FT /locus_tag="DIP1154" FT /product="excinuclease ABC subunit B" FT /note="Similar to Mycobacterium tuberculosis excinuclease FT ABC subunit B UvrB or Rv1633 or MT1669 or MTCY01B2.25 FT SWALL:UVRB_MYCTU (SWALL:O06150) (698 aa) fasta scores: E(): FT 2e-179, 76.61% id in 697 aa, and to Bacillus subtilis FT excinuclease ABC subunit B UvrB or DinA or Uvr FT SWALL:UVRB_BACSU (SWALL:P37954) (661 aa) fasta scores: E(): FT 5.5e-143, 60.15% id in 665 aa, and to Escherichia coli FT excinuclease ABC subunit B UvrB or B0779 or Z0998 or FT ECS0857 SWALL:UVRB_ECOLI (SWALL:P07025) (673 aa) fasta FT scores: E(): 9.4e-134, 57.38% id in 664 aa" FT /db_xref="GOA:Q6NHI3" FT /db_xref="InterPro:IPR004807" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHI3" FT /protein_id="CAE49674.1" FT /translation="MGDIERTDARFEVISEYEPAGDQPAAIEELDARLSRGERDVVLLG FT ATGTGKSATAAWLIEQQQRPTLVMAPNKTLAAQLANELRQLLPNNAVEYFVSYYDYYQP FT EAYIAQTDTYIEKDSSINDDVERLRHRATSSLLSRRDVVVVSSVSCIYGLGTPQSYLDR FT SVVLRVDEEVERDRFLRLLVDIQYDRNDVGFTRGTFRVKGDTVDIIPAYEEVAVRVEFF FT GDDIDALYYIHPLTGDVIRQVDEVRIFPATHYVAGPERMAKAVEDIKAELRDRLEDLEN FT RGKLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHLDGRPAGSAPATLLDYFPEDFLT FT IIDESHVTVPQIGGMFEGDMSRKRNLVEFGFRLPSALDNRPLKWEEFEQRVGQTVYMSA FT TPGDYELAASGGEYVEQVIRPTGLVDPEIDVRPTRGQIDDLIHEIKQRTTKDERVLVTT FT LTKKMAEDLTDYLLENGIRVRYLHSDIDTLQRVELLRQLRLGEYDVLVGINLLREGLDL FT PEVSLVAILDADKEGFLRSTKSLIQTIGRAARNVSGTVIMYADKITDSMQYAIDETERR FT REKQIAYNKEHGIDPQPLRKKIADILEQVQESKAESTAPSSDAVVVSKTNTSSMPVAEL FT RSLIDDLTTQMGTAARELKFELAGRLRDEIAELKKELRGMEEIGLA" FT misc_feature 104683..104916 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 104701..105951 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 104791..104814 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 105835..106332 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 106051..106311 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature 106564..106671 FT /note="HMMPfam hit to PF02151, UvrB/uvrC motif" FT /note="ProfileScan hit to PS50151, UvrB/uvrC motif." FT CDS 106933..107373 FT /transl_table=11 FT /locus_tag="DIP1155" FT /product="Putative stress related protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT universal stress protein family MT1672 SWALL:AAK45942 FT (EMBL:AE007031) (146 aa) fasta scores: E(): 1.4e-19, 49.31% FT id in 146 aa, and to Rhizobium meliloti hypothetical FT protein RA0598 or SMA1100 SWALL:AAK65256 (EMBL:AE007249) FT (153 aa) fasta scores: E(): 6.8e-07, 38.37% id in 86 aa" FT /db_xref="GOA:Q6NHI2" FT /db_xref="InterPro:IPR006015" FT /db_xref="UniProtKB/TrEMBL:Q6NHI2" FT /protein_id="CAE49675.1" FT /translation="MSDYSTIVVGTDGSKSSMLAVERAAKIAAAMDCTLVVGCAYYENK FT EDASKTLRQDSVTVLGNDPAQQNLDKAAAVAKEIGATKIETAILPGTPVEALMAIVREH FT NADLLVVGNRGINSLTGRLLGSVPADVARQSDCDVMIVHTVS" FT misc_feature 106933..107118 FT /note="ScanRegExp hit to PS00430, TonB-dependent receptor FT proteins signature 1." FT misc_feature 106939..107361 FT /note="HMMPfam hit to PF00582, Universal stress protein FT family" FT misc_feature 106942..106998 FT /note="FPrintScan hit to PR01438, Universal stress protein FT signature" FT misc_feature 107239..107277 FT /note="FPrintScan hit to PR01438, Universal stress protein FT signature" FT misc_feature 107293..107361 FT /note="FPrintScan hit to PR01438, Universal stress protein FT signature" FT CDS complement(107422..109734) FT /transl_table=11 FT /locus_tag="DIP1156" FT /product="Putative helicase" FT /note="Similar to Streptomyces coelicolor putative helicase FT protein SCE59.11c SWALL:Q9L1U3 (EMBL:AL138851) (744 aa) FT fasta scores: E(): 5.4e-32, 34.77% id in 788 aa, and to FT Clostridium acetobutylicum superfamily I DNA helicase FT CAC1026 SWALL:AAK79002 (EMBL:AE007618) (763 aa) fasta FT scores: E(): 2e-15, 23.98% id in 788 aa" FT /db_xref="GOA:Q6NHI1" FT /db_xref="InterPro:IPR014016" FT /db_xref="UniProtKB/TrEMBL:Q6NHI1" FT /protein_id="CAE49676.1" FT /translation="MIHSLFFHNNTKGTPSMKHPIDSISAEIEDEQAYVDKLFGKLDEE FT VVAANQRLNDVMLHVDPANPDAEALVRRETEYHALNEKIDRLNIAQLGLVFGRIDVTAQ FT RTDLIDNWVAGTDNVDRRYIGRMGLDDRQNDYRTLLLDWRAPLARPFYLATTAHPEGVL FT HRRHIRTQGRSVVGVDDEVLSGVSAESAHSERADVVSETALYRAMCSARTGHMHSIVET FT IQREQDDIIRDPTRGVMVVEGGPGTGKTAVALHRVAYLLYTWRDQLAKTGVLIVGPNRS FT FLDYISRVLPELGETGVVLSTVGDLYPGISGTAVEDSLAREIKGSEEMVTVLRRLVQEY FT QQIPSEPFTIKIDGLELTVTPDIVKKARTRARRSRRPHNEARPLFTEHLTELLSHQMAD FT LIGADPMGGKNLLSAADIAQLHDELLEESVVAEIVDEYWPQLTPQDTLTSLLESQNMIS FT TVAYDYDEETQEALWRQQGSPWAASDAALLDELAVIIGVPDPEKERAEQEKAWREQIKD FT AQDALEILTGSANTDLDDESDAEILSAHDVIDAETLARRQEVRDIRSTAQRAREDLAWA FT YGHVIVDEAQELTPMEWRMVMRRCPSRWMTLVGDTAQTSSPAGVDSWAEALEPFVSGRY FT VTHHLTINYRTPAEIMEWANKVLHVFAPDAVGSTALRQSGTPVRFENSDAHAIEIAQKL FT RQDDPSRLTAIIGPDSMANNEIFGVSDIKGLEYDHVVVTNPIDIVNGSPQGWQDLYVAL FT TRATQSLCIIGDLPELS" FT misc_feature complement(107761..107820) FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature complement(108952..109068) FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature complement(108985..109008) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT stem_loop complement(109783..109833) FT /note="Score 53: 19/20 (95%) matches, 0 gaps" FT CDS complement(109858..110703) FT /transl_table=11 FT /locus_tag="DIP1157" FT /product="Conserved hypothetical protein" FT /note="N-terminal region similar to Streptomyces coelicolor FT hypothetical 18.8 kDa protein SC9H11.26c SWALL:Q9KYL5 FT (EMBL:AL356592) (177 aa) fasta scores: E(): 9.8e-11, 35.13% FT id in 148 aa. Note: Possible colied-coil region at FT C-terminal domain from residue 242 till the end" FT /db_xref="InterPro:IPR011637" FT /db_xref="UniProtKB/TrEMBL:Q6NHI0" FT /protein_id="CAE49677.1" FT /translation="MIRKFARPMLASVYVADGVDVVLNSQAHVEGTQTVINRLRTVVPR FT KYMKKLPEDPQVITQAVGATKVLAGSSLALGKAPRTSAAVLAAISVPTIIARHAFWETQ FT DREEKIARRQGFLTSIALLGGLAITSADTAGKPSLKWRADKAVQKASTQIQQALPTKTE FT TEKFGDQASAVASQAASTAKDLWNDATDSVSQYGQTALEYVEDNKDDWLALAQKNAVLA FT KKKAVKVAARAQERAAQAYESAEKSTGRNAKRASKKANQLQRKAEKSLNKAMKRFDSAF FT " FT CDS complement(110888..111535) FT /transl_table=11 FT /locus_tag="DIP1158" FT /product="Putative hydrolase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT metallo-beta-lactamase superfamily protein MT1673 FT SWALL:AAK45943 (EMBL:AE007031) (264 aa) fasta scores: E(): FT 5e-29, 45.58% id in 204 aa, and to Streptomyces coelicolor FT putative hydrolase SCC54.20 SWALL:Q9Z505 (EMBL:AL035591) FT (218 aa) fasta scores: E(): 7.2e-26, 40.55% id in 217 aa" FT /db_xref="GOA:Q6NHH9" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q6NHH9" FT /protein_id="CAE49678.1" FT /translation="MISVDTMTNASSTEGISLHHISVSDLDNNCYLLTTESDEGTQGLL FT IDAADNAPALLDLAESAGARITAVVTTHRHFDHVRALEDVLDTTKATHFASLGDSPRLP FT RSADTTLGEGDTLRWAGHNLRAHILRGHTQEGLALSIKIDGIYHLFVGDSLFPRGVGKT FT STPEEFNQLLSDVKTRLFDVYPDTAVVHPGHGKPTTLGTERPHLEQWRQRGW" FT misc_feature complement(110954..111469) FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily" FT RBS 111674..111680 FT CDS 111689..114550 FT /transl_table=11 FT /gene="uvrA" FT /locus_tag="DIP1159" FT /product="excinuclease ABC subunit A" FT /note="Similar to Mycobacterium tuberculosis excinuclease FT ABC subunit A UvrA or Rv1638 or MT1675 or MTCY06H11.02 FT SWALL:UVRA_MYCTU (SWALL:P94972) (972 aa) fasta scores: E(): FT 0, 71.87% id in 953 aa, and to Escherichia coli FT excinuclease ABC subunit A UvrA or DinE or B4058 FT SWALL:UVRA_ECOLI (SWALL:P07671) (940 aa) fasta scores: E(): FT 2.7e-176, 54.35% id in 953 aa" FT /db_xref="GOA:Q6NHH8" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NHH8" FT /protein_id="CAE49679.1" FT /translation="MVDRLVVRGAREHNLKGVDIDIPRDAMVVFTGLSGSGKSSLAFDT FT IFAEGQRRYVESLSSYARMFLGQMDKPDVDFIDGLSPAVSIDQKSTNRNPRSTVGTITE FT VYDYLRLLFSRAGTAHCPVCDAKVERQTPQQIVDQVMDMEQGLKFQVLAPVVRTRKGEF FT VDLFADLATQGYSRVRVDGSIYSLSEPPTLKKQVKHDIDVVVDRLQVKASQQQRLTDSV FT ETALKLADGVVVLEFVGLSEDDPQRFVRFSEKMSCPNGHALSVDELEPRAFSFNSPYGA FT CSACDGLGTRTVVDTELLIPDTHAPALKAIQPWNSSPNHRYFEKLIEALAKAKGFDPAT FT PFDELSEDQRDALIHGCQEEVTVRYKNRYGRVRTWTAPFEGVLGYIERKLDQADTESQK FT DRLLQYTREVACPTCHGSRLKPEILAVRLASSSHGELSIAGLSELSIQDASDFLQDLVL FT GKREEIIAGAVLKEINARLRFLLDVGLTYLTLNRAAGTLSGGEAQRIRLATQIGSGLAG FT VLYVLDEPSIGLHQRDNQRLISTLERLRDIGNTLIVVEHDEDTIRAADWLIDVGPKAGE FT YGGEIVYQGEPAGIVDCKESITGAYLSGKKVLGVPEKRRAIDPDRALKIVGAKENNLKG FT INVTIPLGVLACVTGVSGSGKSTLVNQILAKVLANELNRARTVPGRAQRVEGIDNLDKL FT VQVDQSPIGRTPRSNPATYTGVFDKVRNLFAETTEAKVRGYKPGRFSFNVKGGRCEACQ FT GDGTLKIEMNFLPDVYVPCEVCHGARYNRETLEVKYKGKNIAEVLDMPISEAAEFFEPI FT TSIHRYLKTLTEVGLGYVRLGQSATTLSGGEAQRVKLAAELQKRSNGRTVYILDEPTTG FT LHFEDIRKLMLVIQGLVDKGNSVIIIEHNLDVIKTADWVIDMGPEGGSGGGTVVAEGTP FT EQVAEVSGSYTGGFLKEVLSASK" FT misc_feature 111782..111805 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 112949..113401 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 113177..113221 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 113177..113398 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature 113615..114430 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 113636..113659 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 114002..114019 FT /note="ScanRegExp hit to PS00190, Cytochrome c family FT heme-binding site signature." FT misc_feature 114203..114247 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 114203..114427 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 114838..115341 FT /transl_table=11 FT /gene="infC" FT /locus_tag="DIP1160" FT /product="translation initiation factor IF-3" FT /note="Similar to Mycobacterium tuberculosis translation FT initiation factor IF-3 InfC or Rv1641 or MT1679 or FT MTCY06H11.05 SWALL:IF3_MYCTU (SWALL:P94975) (201 aa) fasta FT scores: E(): 4.8e-50, 79.51% id in 166 aa, and to FT Escherichia coli translation initiation factor IF-3 InfC or FT Fit or B1718 or Z2747 or ECS2425 SWALL:IF3_ECOLI FT (SWALL:P02999) (180 aa) fasta scores: E(): 3.8e-28, 50.9% FT id in 165 aa. Note: The initiation codon is ATT (Ref: FT Butler J.S., et al.; AUU-to-AUG mutation in the initiator FT codon of the translation initiation factor IF3 abolishes FT translational autocontrol of its own gene (infC) in vivo; FT PNAS, 84:4022-4025(1987))" FT /db_xref="GOA:Q6NHH7" FT /db_xref="InterPro:IPR019815" FT /db_xref="UniProtKB/TrEMBL:Q6NHH7" FT /protein_id="CAE49680.1" FT /translation="MNERIRVPEVRLVGPNGEQVGIVRIDDARKLAYEADLDLVEVAPN FT AKPPVCKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKIDDHDYETKKNNVIRFL FT EKGSKVKVTIMFRGREQSRPELGFRLLERLAGDVAEYGIVESKPKQDGRNMTMVFGPAR FT KGKK" FT misc_feature 114895..115326 FT /note="BlastProDom hit to PD002880, PD002880" FT /note="HMMPfam hit to PF00707, Translation initiation FT factor IF-3" FT misc_feature 114991..115032 FT /note="ScanRegExp hit to PS00938, Initiation factor 3 FT signature." FT CDS 115371..115565 FT /transl_table=11 FT /gene="rpmI" FT /locus_tag="DIP1161" FT /product="50S ribosomal protein L35" FT /note="Similar to Streptomyces coelicolor 50S ribosomal FT protein L35 RpmI or SCI35.21c SWALL:RL35_STRCO FT (SWALL:O88059) (64 aa) fasta scores: E(): 1.1e-10, 58.06% FT id in 62 aa, and to Bacillus subtilis 50S ribosomal protein FT L35 RpmI SWALL:RL35_BACSU (SWALL:P55874) (65 aa) fasta FT scores: E(): 1.5e-07, 50% id in 60 aa" FT /db_xref="GOA:Q6NHH6" FT /db_xref="InterPro:IPR018265" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHH6" FT /protein_id="CAE49681.1" FT /translation="MKQKTHKGTAKRVKITGSGKLRREQANRRHLLEGKPSKRTRRLKG FT TEDVAKADTKRIKRLLGKA" FT misc_feature 115374..115427 FT /note="FPrintScan hit to PR00064, Ribosomal protein L35 FT signature" FT misc_feature 115380..115553 FT /note="BlastProDom hit to PD003417, PD003417" FT /note="HMMPfam hit to PF01632, Ribosomal protein L35" FT misc_feature 115428..115472 FT /note="FPrintScan hit to PR00064, Ribosomal protein L35 FT signature" FT misc_feature 115473..115529 FT /note="FPrintScan hit to PR00064, Ribosomal protein L35 FT signature" FT CDS 115627..116010 FT /transl_table=11 FT /gene="rplT" FT /locus_tag="DIP1162" FT /product="50S ribosomal protein L20" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L20 RplT or Rv1643 or MT1681 or MTCY06H11.07 FT SWALL:RL20_MYCTU (SWALL:P94977) (129 aa) fasta scores: E(): FT 7.7e-36, 75.8% id in 124 aa, and to Escherichia coli 50S FT ribosomal protein L20 RplT or PdzA or B1716 or Z2745 or FT ECS2423 or STM1336 or STY1775 SWALL:RL20_ECOLI FT (SWALL:P02421) (117 aa) fasta scores: E(): 5.5e-23, 57.75% FT id in 116 aa" FT /db_xref="GOA:Q6NHH5" FT /db_xref="InterPro:IPR005812" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHH5" FT /protein_id="CAE49682.1" FT /translation="MARVKRSLNAKKKRREILKSAKGYRGQRSRLYRKAKEQWLHSMTY FT AYRDRRARKSEFRKLWITRINAAARMNDITYNRLIQGLRLAEIEVDRKVLADLAVNDFA FT AFSAICEAAKAALPADVNAPKAA" FT misc_feature 115630..115953 FT /note="HMMPfam hit to PF00453, Ribosomal protein L20" FT misc_feature 115633..115953 FT /note="BlastProDom hit to PD002389, PD002389" FT misc_feature 115660..115749 FT /note="FPrintScan hit to PR00062, Ribosomal protein L20 FT signature" FT misc_feature 115750..115839 FT /note="FPrintScan hit to PR00062, Ribosomal protein L20 FT signature" FT misc_feature 115786..115836 FT /note="ScanRegExp hit to PS00937, Ribosomal protein L20 FT signature." FT misc_feature 115849..115929 FT /note="FPrintScan hit to PR00062, Ribosomal protein L20 FT signature" FT CDS complement(116260..116805) FT /transl_table=11 FT /locus_tag="DIP1163" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHH4" FT /protein_id="CAE49683.1" FT /translation="MIKATYGVLARVFAIVLIVVGAAAIFGGTYAHGFVTEQLKQERIT FT MPTQEGIDKLEDQASKEILQQWVGQDLTTGPQAKAFADNYIWQHMMASSGGKTFQEFGA FT VIAQAKKDGKSADEIAALQKTRDSLFQGNTLRGILLSAYGWWLVGSIALWAGIGLIILG FT LILATLGFITWSAKKTQV" FT misc_feature complement(order(116287..116352,116719..116784)) FT /note="2 probable transmembrane helices predicted for FT DIP1163 by TMHMM2.0" FT misc_feature complement(116707..116805) FT /note="Signal peptide predicted for DIP1163 by SignalP 2.0 FT HMM (Signal peptide probability 0.941) with cleavage site FT probability 0.440 between residues 33 and 34" FT CDS 117052..117870 FT /transl_table=11 FT /gene="tsnR" FT /locus_tag="DIP1164" FT /product="Putative rRNA methyltransferase" FT /note="Similar to Mycobacterium tuberculosis TsnR or Rv1644 FT or MT1682 or MTCY06H11.08 SWALL:AAK45951 (EMBL:Z85982) (260 FT aa) fasta scores: E(): 2.4e-45, 52.85% id in 263 aa, and to FT Mycobacterium leprae putative rRNA methyltransferase TsnR FT or ML1397 SWALL:Q9CC19 (EMBL:AL583921) (259 aa) fasta FT scores: E(): 6.7e-45, 52.89% id in 259 aa, and to Bacillus FT halodurans rRNA methylase BH3112 SWALL:Q9K894 FT (EMBL:AP001517) (251 aa) fasta scores: E(): 3.2e-17, 35.24% FT id in 244 aa" FT /db_xref="GOA:Q6NHH3" FT /db_xref="InterPro:IPR013123" FT /db_xref="UniProtKB/TrEMBL:Q6NHH3" FT /protein_id="CAE49684.1" FT /translation="MPIDFSSPFTERTPRVVNAAKLLRSAGRKKVDRFLAEGENSVEAA FT VATGAATDLFVTEKAAERFEAIVTAAGHMGVFVHPITDRAAKSLSDTMTTTGIFAVCLP FT VLWSAREALKGNPSLVCVAVETGEPGNAGTLVRVADAMGADCVIFAGTTVDPQSPKAVR FT ASAGSLFHIPVVREPDMQKVWQILRARNVQMLATAAQGEINLDTAGELLEKPTAWLMGN FT EAHGLNDEALSAADHSVRIPIRGRAESLNLATAASICMYESSKSQAHKDN" FT misc_feature 117403..117834 FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase family" FT misc_feature 117415..117846 FT /note="BlastProDom hit to PD001243, PD001243" FT CDS 118001..119056 FT /transl_table=11 FT /gene="pheS" FT /locus_tag="DIP1165" FT /product="phenylalanyl-tRNA synthetase alpha chain" FT /EC_number="6.1.1.20" FT /note="Similar to Mycobacterium tuberculosis FT phenylalanyl-tRNA synthetase alpha chain PheS or Rv1649 or FT MT1687 or MTCY06H11.14 SWALL:SYFA_MYCTU (SWALL:P94984) (341 FT aa) fasta scores: E(): 6.6e-87, 62.35% id in 340 aa, and to FT Bacillus subtilis phenylalanyl-tRNA synthetase alpha chain FT PheS SWALL:SYFA_BACSU (SWALL:P17921) (344 aa) fasta scores: FT E(): 2.6e-54, 44.02% id in 343 aa, and to Escherichia coli FT phenylalanyl-tRNA synthetase alpha chain PheS or B1714 FT SWALL:SYFA_ECOLI (SWALL:P08312) (327 aa) fasta scores: E(): FT 7.1e-52, 44.71% id in 331 aa" FT /db_xref="GOA:Q6NHH2" FT /db_xref="HSSP:1B7Y" FT /db_xref="InterPro:IPR004188" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHH2" FT /protein_id="CAE49685.1" FT /translation="MSEQPDYPAVELTEEGLAQAADAAIRAFGVASNLDELNIARRDHL FT GDAAPIPQARRSLGTLPKDQRKDAGRLVNMARGRLEKHFAQVKEVLEAKHLEEMLKAER FT VDVTVPTTRHQTGALHPITTLSEKIADIFVAMGYEVADGPEIEAEYFNFDSLNFIPDHP FT ARTLQDTFHVGEPGSSQVLRTHTSPVQMRTMLSREVPIYVVCPGRVFRTDELDATHTPV FT FHQVEGLAVDKGLTMAHLRGTLDHLAKTLFGPETKTRMRANYFPFTEPSAEVDVWFPNK FT KGGAGWIEWGGCGMVNPNVLKAAGIDPEVYSGFAFGMGLERTLQFRNGLTDMRDMVEGD FT VRFTLPFGVQA" FT misc_feature 118073..118303 FT /note="HMMPfam hit to PF02912, Aminoacyl tRNA synthetase FT class II, N-terminal domain" FT misc_feature 118358..119002 FT /note="HMMPfam hit to PF01409, tRNA synthetases class II FT (F)" FT misc_feature 118628..118681 FT /note="ScanRegExp hit to PS00179, Aminoacyl-transfer RNA FT synthetases class-II signature 1." FT CDS 119098..121608 FT /transl_table=11 FT /gene="pheT" FT /locus_tag="DIP1166" FT /product="phenylalanyl-tRNA synthetase beta chain" FT /EC_number="6.1.1.20" FT /note="Similar to Mycobacterium tuberculosis FT phenylalanyl-tRNA synthetase beta chain PheT or Rv1650 or FT MT1688 or MTCY06H11.15 SWALL:SYFB_MYCTU (SWALL:P94985) (831 FT aa) fasta scores: E(): 4.2e-156, 49.64% id in 844 aa, and FT to Bacillus subtilis phenylalanyl-tRNA synthetase beta FT chain PheT SWALL:SYFB_BACSU (SWALL:P17922) (804 aa) fasta FT scores: E(): 1.8e-53, 30.69% id in 847 aa" FT /db_xref="GOA:Q6NHH1" FT /db_xref="HSSP:1B7Y" FT /db_xref="InterPro:IPR002547" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHH1" FT /protein_id="CAE49686.1" FT /translation="MLISQNWVTELLGRSNPDWKVSPAELDSGYVRVGFETEGYSAIPE FT TTGPLVIGRVETIEELEGFKKPIRHCFVNVGDANGTGELQSIVCGARNFQEGSYVVVSL FT PGAVLPGNFAISARETYGRMSAGMICSAAELGLSDKQNSGIITLPNEIAEPGTDARSIV FT GLDDTVFDVNITPDRGYALSARGLTRELASAFNLKFVDPAVDLNVAGVDTSDVPESSGE FT LIKVDLRPETQARRFGVRKVSGIDPKAPTPFWMQRELMLSGQRCVNAATDVTNFVMLLL FT GQPMHAFDANLIKGGLVVRNALEGESFETLDHVKRTLSAEDVVISDDTGIQSLAGVMGG FT TTSEISDETTDVFFEAANWHPITTARTSRRHKLSTEASRRFERGVDPEIIEVALDVACA FT LLVSIAGGSVESARTLIGSAPSMPQIRMKTSRPAELAGVAYSDATVIARLKEVGCAVEV FT DGDDLLVTPPTWRPDMTMSADLVEEVLRLEGLEDIPTIVPLAPVGSGLSPAQLRRRAIG FT HALAYSGYAEILPTPFIRNDTFDVWGLAADDERRSVVTVQNPLDAEYGVLATTLLPSML FT EAVTRNVSRGQTSVNLFGLQQVSFKRGSGISPMLDVRQRPSDNEVAELLNSLPVQPLHV FT ATVGAGFMELEGPWGHGRTYSFADAIESARVVARAAGVELNVENVEMLPWHPGRCAALK FT AGDHIVGYAGELHPQIVEALNLPARTCAMELDVSALPLKESFPAPVLSAFPVLHQDLAL FT VVDESVPAESVRKVIEDAAGELLEKVELFDVYRSEALGAEKKSLAFSLEFRAQDRTLTD FT DECSEGRLAAAGRAAELFGATMRA" FT misc_feature 119872..119907 FT /note="ScanRegExp hit to PS00070, Aldehyde dehydrogenases FT cysteine active site." FT CDS 121735..122778 FT /transl_table=11 FT /gene="argC" FT /locus_tag="DIP1167" FT /product="N-acetyl-gamma-glutamyl-phosphate reductase" FT /EC_number="1.2.1.38" FT /note="Similar to Corynebacterium glutamicum FT N-acetyl-gamma-glutamyl-phosphate reductase ArgC FT SWALL:ARGC_CORGL (SWALL:Q59279) (347 aa) fasta scores: E(): FT 1.9e-91, 69.45% id in 347 aa, and to Bacillus subtilis FT N-acetyl-gamma-glutamyl-phosphate reductase ArgC FT SWALL:ARGC_BACSU (SWALL:P23715) (346 aa) fasta scores: E(): FT 1.3e-38, 39.3% id in 346 aa" FT /db_xref="GOA:Q6NHH0" FT /db_xref="InterPro:IPR012280" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHH0" FT /protein_id="CAE49687.1" FT /translation="MNIKVAIVGASGYAGGEILRLLLQHPLYLSGQLSIGALMGSSTVG FT QTVSELMPHLPELSDRVVEPTDVETLKSHDVVFLALPHGFSAEIAQQLPAEITVIDCAA FT DFRLKDQKDWDAYYGGKHAGSWPYGIPEMPGHRDLIASSKRIAVPGCFPTGATLALLPA FT IAAHIIEPDVSVVSITGVSGAGKKASVAMLGAETMGSLKAYNVAGKHRHTPEISQNLSE FT YADQKIVVSFTPVLAPLPRGILTTATAKLTSGITLDEIREIYLNAYENEPFVHILPSGQ FT QPQTQAVVGSNMCHIQVDADDNSKKLVVTSAIDNLTKGTAGAAVQCMNLSLGVSETSGL FT PCGGVAP" FT misc_feature 121738..122175 FT /note="HMMPfam hit to PF01118, Semialdehyde dehydrogenase, FT NAD binding domain" FT misc_feature 122107..122754 FT /note="BlastProDom hit to PD003765, PD003765" FT misc_feature 122170..122220 FT /note="ScanRegExp hit to PS01224, FT N-acetyl-gamma-glutamyl-phosphate reductase active site." FT misc_feature 122200..122688 FT /note="HMMPfam hit to PF02774, Semialdehyde dehydrogenase, FT dimerisation domain" FT CDS 122853..124013 FT /transl_table=11 FT /gene="argJ" FT /locus_tag="DIP1168" FT /product="glutamate N-acetyltransferase" FT /EC_number="2.3.1.35" FT /note="Similar to Corynebacterium glutamicum glutamate FT N-acetyltransferase ArgJ SWALL:ARGJ_CORGL (SWALL:Q59280) FT (388 aa) fasta scores: E(): 5.5e-103, 71.9% id in 388 aa, FT and to Bacillus subtilis arginine biosynthesis bifunctional FT protein [includes: glutamate N-acetyltransferase; amino FT acid acetytransferase] ArgJ SWALL:ARGJ_BACSU (SWALL:P36843) FT (406 aa) fasta scores: E(): 8.6e-40, 36.09% id in 399 aa" FT /db_xref="GOA:P62059" FT /db_xref="InterPro:IPR002813" FT /db_xref="UniProtKB/Swiss-Prot:P62059" FT /protein_id="CAE49688.1" FT /translation="MSSRGVTAPQGFVAAGATAGIKPSGNKDMALVVNQGPEFVGAAVF FT TRNRVVASPVKYTKKAVANGTLRAVLYNSGNANACNGVQGDKDVHEIVDYLASKLKVDP FT LDIAACSTGLIGEPLPVTMIKAGVDKLIPALGDNGGEAADSIMTTDTVAKETVVKCNGW FT TLGGMGKGVGMMAPSLATMLVCLTTDACVTQAQAHAALSKACDVTFNTLDIDGSTSTND FT TVILLANGASGITPTESEFNDAVLQACADIADQLQADAEGVTKRVRITVTGTTTDSQAL FT NAARTLGRDNLFKCAMFGSDPNWGRVLAAVGMADADMDPDNISVYFNDQPVCLQSGGTP FT EARQVDLSGIDIDVRVDLGTGGPGKAFVRTTDLSHQYVEINSAYSS" FT misc_feature 122868..124010 FT /note="BlastProDom hit to PD004193, PD004193" FT misc_feature 122886..124010 FT /note="HMMPfam hit to PF01960, ArgJ family" FT misc_feature 123897..123938 FT /note="ScanRegExp hit to PS01039, Bacterial extracellular FT solute-binding proteins, family 3 signature." FT CDS 124050..124982 FT /transl_table=11 FT /gene="argB" FT /locus_tag="DIP1169" FT /product="acetylglutamate kinase" FT /EC_number="2.7.2.8" FT /note="Similar to Corynebacterium glutamicum FT acetylglutamate kinase ArgB SWALL:ARGB_CORGL (SWALL:Q59281) FT (294 aa) fasta scores: E(): 2.4e-81, 77.5% id in 289 aa, FT and to Bacillus subtilis acetylglutamate kinase ArgB FT SWALL:ARGB_BACSU (SWALL:P36840) (258 aa) fasta scores: E(): FT 2.2e-23, 36.88% id in 244 aa" FT /db_xref="GOA:Q6NHG8" FT /db_xref="InterPro:IPR011148" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHG8" FT /protein_id="CAE49689.1" FT /translation="MTATIDNLTSRERATVLADALPWLQRYRDKIVVVKYGGNAMVDEE FT LKAAFAADMVFLRTVGVRPVVVHGGGPQISQMLQRLGIEGEFKGGFRVTSPEVLEIVRM FT VLFGQVGRDLVGLINSHGPYAVGTSGEDAGLFRAEKRLVEIDGELTDIGQVGNITAVNA FT SSLMGIIDAGRIPVVSTIAPGDDGSVYNINADTAAGALAAALSAERLLILTNVEGLYTD FT WPNKDSLVSVIGAERLREKLSALGSGMIPKMESCVDAVIHGVSAAHVIDGRVAHSVLLE FT LLTSGGVGTMVVPDTEMTNGTVYRKDNHV" FT misc_feature 124137..124862 FT /note="HMMPfam hit to PF00696, Amino acid kinase family" FT CDS 124975..126216 FT /transl_table=11 FT /gene="argD" FT /locus_tag="DIP1170" FT /product="acetylornithine aminotransferase" FT /EC_number="2.6.1.11" FT /note="Similar to Corynebacterium glutamicum FT acetylornithine aminotransferase ArgD SWALL:ARGD_CORGL FT (SWALL:Q59282) (389 aa) fasta scores: E(): 2.9e-98, 65.21% FT id in 391 aa, and to Mycobacterium tuberculosis FT acetylornithine aminotransferase ArgD or Rv1655 or MT1693 FT or MTCY06H11.20 SWALL:ARGD_MYCTU (SWALL:P94990) (400 aa) FT fasta scores: E(): 5.2e-74, 50.12% id in 405 aa" FT /db_xref="GOA:Q6NHG7" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q6NHG7" FT /protein_id="CAE49690.1" FT /translation="MSKNAANTDSQSSETQWADVIMNTYGTPPLTITGGNGATLTDSVG FT KTYIDLLAGIAVNSLGHAHPAIVEAVTEQISNFAHVSNLFGSRPVIDTAARLIRRFAEE FT TTDSTQTAHDTRVFFCNSGTEANEAAFKLARMTGKNRILAAQHGFHGRTMGALAMTGQP FT DKQMPFYPLPAGVEFYPYGDIDYLRKLVQINSTDVAAIILEPIQGETGVIPAPDGFLSA FT VRGLCNEFDILMIVDEVQTGIGRTGDFFAFQHETGVIPDVVTMAKGLGGGLPIGACLAT FT GKAKDLLGPGKHGTTFGGNPVSCAAAGAVLRTIDDDFLENVQRKSHKLVKRMSRLPLVE FT SIRGRGLMLGVLLSEPVAKECVKLALEHGLIVNAPSASVLRLTPPLVISDAEIHESIER FT LSIVLTKIKKKECH" FT misc_feature 125032..126198 FT /note="HMMPfam hit to PF00202, Aminotransferase class-III" FT misc_feature 125674..125790 FT /note="ScanRegExp hit to PS00600, Aminotransferases FT class-III pyridoxal-phosphate attachment site." FT CDS 126245..127204 FT /transl_table=11 FT /gene="argF" FT /locus_tag="DIP1171" FT /product="ornithine carbamoyltransferase, anabolic" FT /EC_number="2.1.3.3" FT /note="Similar to Corynebacterium glutamicum ornithine FT carbamoyltransferase, anabolic ArgF SWALL:OTCA_CORGL FT (SWALL:Q59283) (319 aa) fasta scores: E(): 3.4e-97, 77.11% FT id in 319 aa, and to Bacillus subtilis ornithine FT carbamoyltransferase, anabolic ArgF SWALL:OTCA_BACSU FT (SWALL:P18186) (319 aa) fasta scores: E(): 4.2e-45, 45.19% FT id in 312 aa" FT /db_xref="GOA:Q6NHG6" FT /db_xref="HSSP:1A1S" FT /db_xref="InterPro:IPR002292" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHG6" FT /protein_id="CAE49691.1" FT /translation="MSTQTRVRHFLADDDLTPAQQREVLELASELKQHPYSRKTYDGPQ FT SVAVLFDKTSTRTRFSFDAGISQLGGHAIVVDSGKSQMGKGETFQDTGAVLSRFVSTIV FT WRTGSHQNLLDMAETATVPIVNALSDDLHPCQILADLQTCIEHLCPQEGVPGLKGLKAV FT YLGDGDNNMANSYMIGFATAGLDITIIAPKKFQPKQEFVDRAEKRASETGAIVSVTADI FT SAVSDADVVITDTWVSMGMENDGIDRRTPFLPYQVNDEVMALAKKSAIFLHCLPAYRGS FT EVAASVIDGPQSVVFDEAENRLHAQKALLVWLMENQPR" FT misc_feature 126266..126688 FT /note="HMMPfam hit to PF02729, Aspartate/ornithine FT carbamoyltransferase, carbamoyl-P binding domain" FT misc_feature 126365..126433 FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature 126389..126433 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 126395..126418 FT /note="ScanRegExp hit to PS00097, Aspartate and ornithine FT carbamoyltransferases signature." FT misc_feature 126395..126454 FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature 126479..126508 FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature 126488..126529 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 126608..126652 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 126638..126691 FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature 126641..126676 FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature 126713..127186 FT /note="HMMPfam hit to PF00185, Aspartate/ornithine FT carbamoyltransferase, Asp/Orn binding domain" FT misc_feature 126935..126967 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 127043..127072 FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature 127079..127150 FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature 127121..127156 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 127127..127171 FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT CDS 127311..127802 FT /transl_table=11 FT /gene="argR" FT /locus_tag="DIP1172" FT /product="Arginine repressor" FT /note="Similar to Corynebacterium glutamicum arginine FT repressor ArgR SWALL:ARGR_CORGL (SWALL:O85175) (171 aa) FT fasta scores: E(): 2.6e-39, 71.33% id in 157 aa, and to FT Streptomyces clavuligerus arginine repressor ArgR FT SWALL:ARGR_STRCL (SWALL:P95721) (178 aa) fasta scores: E(): FT 4.5e-20, 45.16% id in 155 aa" FT /db_xref="GOA:Q6NHG5" FT /db_xref="HSSP:1B4B" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHG5" FT /protein_id="CAE49692.1" FT /translation="MSNGPITRTVRQALILDLLEQNQVSSQMQLSELLKQRGVDITQGT FT LSRDLDELGAKKIRPNGGRAFYAVGTSEDAASSTTAGTREKLRKMLDDLLVSVDHSGNI FT AVLRTPPAGAPFLASFIDRVGMDEVVGTIAGDDTVFVLARDPMTGKELGEFLSQRRTSL FT " FT misc_feature 127320..127547 FT /note="HMMPfam hit to PF01316, Arginine repressor, DNA FT binding domain" FT misc_feature 127323..127748 FT /note="BlastProDom hit to PD007402, PD007402" FT misc_feature 127386..127427 FT /note="FPrintScan hit to PR01467, Bacterial arginine FT repressor signature" FT misc_feature 127434..127481 FT /note="FPrintScan hit to PR01467, Bacterial arginine FT repressor signature" FT misc_feature 127578..127787 FT /note="HMMPfam hit to PF02863, Arginine repressor, FT C-terminal domain" FT misc_feature 127605..127646 FT /note="FPrintScan hit to PR01467, Bacterial arginine FT repressor signature" FT misc_feature 127695..127742 FT /note="FPrintScan hit to PR01467, Bacterial arginine FT repressor signature" FT CDS 127960..129159 FT /transl_table=11 FT /gene="argG" FT /locus_tag="DIP1173" FT /product="argininosuccinate synthase" FT /EC_number="6.3.4.5" FT /note="Similar to Corynebacterium glutamicum FT argininosuccinate synthase ArgG SWALL:ASSY_CORGL FT (SWALL:O85176) (401 aa) fasta scores: E(): 7.6e-136, 84.17% FT id in 398 aa, and to Bacillus subtilis argininosuccinate FT synthase ArgG SWALL:ASSY_BACSU (SWALL:O34347) (403 aa) FT fasta scores: E(): 4e-76, 52.13% id in 399 aa" FT /db_xref="GOA:P61521" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:P61521" FT /protein_id="CAE49693.1" FT /translation="MTNRVVLAYSGGLDTSVAIPYLAKMTGGEVVAVSLDLGQGGEDME FT SVRQRALDCGAVESIVIDAKDEFANDYCLPTIKANGMYMKQYPLVSAISRPLIVKHLVE FT AAKKHGGTHVSHGCTGKGNDQVRFEVGFRNLAPELQIIAPARDYAWTRDKAIAFAEEIN FT LPIEQSKKSPFSIDQNVWGRAVETGFLEDLWNPPTKDLYSYTEDPALGNAPDEIIISFK FT AGVPVAIDGRPVTVLEAIEEMNRRAGAQGIGRLDMVEDRLVGIKSREVYEAPGAIALIT FT AHQAMEDVTIERELARYKRGIDARWSEEVYDGLWYAPLKRSLDAFIENTQEHVTGDIRM FT VMHAGKCTVNGRRSEHSLYDFDLATYDTGDTFDQTLAKGFVELHGLSSKISNKRDREAQ FT " FT misc_feature 127975..129141 FT /note="BlastProDom hit to PD003544, PD003544" FT /note="HMMPfam hit to PF00764, Arginosuccinate synthase" FT misc_feature 127981..128007 FT /note="ScanRegExp hit to PS00564, Argininosuccinate FT synthase signature 1." FT misc_feature 128308..128343 FT /note="ScanRegExp hit to PS00565, Argininosuccinate FT synthase signature 2." FT CDS 129159..130592 FT /transl_table=11 FT /gene="argH" FT /locus_tag="DIP1174" FT /product="argininosuccinate lyase" FT /EC_number="4.3.2.1" FT /note="Similar to Mycobacterium tuberculosis FT argininosuccinate lyase ArgH or Rv1659 or MT1697 or FT MTCY06H11.24 SWALL:ARLY_MYCTU (SWALL:P94994) (470 aa) fasta FT scores: E(): 3.7e-128, 70.41% id in 463 aa, and to FT Corynebacterium glutamicum argininosuccinate lyase ArgH FT SWALL:ARLY_CORGL (SWALL:O88101) (478 aa) fasta scores: E(): FT 1.5e-112, 65.64% id in 489 aa" FT /db_xref="GOA:Q6NHG4" FT /db_xref="HSSP:1AOS" FT /db_xref="InterPro:IPR000362" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHG4" FT /protein_id="CAE49694.1" FT /translation="MQKHGTNEGALWGGRFSGGPSEAMFALSVSTHFDWVLAPYDVLAS FT KAHARVLNKAKLLSDSDLETMLGGLDKLGKAVASGEFKPLPTDEDVHGAMERGLIDIVG FT PEVGGRLRAGRSRNDQVATLFRMWVRDAVRSVALQVTELVDALAYQATQHPRAIMPGKT FT HSQAAQPVLLAHQLLAHAQPLLRDIDRIRDLDKRLAISPYGSGALAGSSLHLDPEAIAQ FT ELGFDSACDNSIDGTSSRDFAAETAYVLAQIAIDMSRLAEEIIYWCTPEYGYVTLSDAW FT STGSSIMPQKKNPDVAELTRGKTGRLIGNLSGLLATLKAQPLAYNRDLQEDKEPIVDSF FT AQLNLLLPAMTGLVSTLTFHEDRLLSLAPAGFTLATDLAEWMVRQGVPFREAHEASGAC FT VRIAESRGVGLDELTDDELASVDVRLTPEVRTVLTVEGAVASRATRGGTAGVRVEEQRS FT RVESTSQSFKEWALTPVRK" FT misc_feature 129198..130478 FT /note="HMMPfam hit to PF00206, Lyase" FT misc_feature 129486..129554 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature 129489..129545 FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature 129609..129671 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature 129624..129674 FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature 129762..129812 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature 129876..129950 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature 129876..129959 FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature 130008..130037 FT /note="ScanRegExp hit to PS00163, Fumarate lyases FT signature." FT misc_feature 130008..130058 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature 130047..130070 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 130113..130172 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT CDS 130656..130868 FT /transl_table=11 FT /locus_tag="DIP1175" FT /product="Conserved hypothetical protein" FT /note="Similar to Caulobacter crescentus hypothetical FT protein CC0108 SWALL:Q9ABW2 (EMBL:AE005685) (65 aa) fasta FT scores: E(): 9.4e-08, 44.64% id in 56 aa, and to FT Mycobacterium tuberculosis hypothetical 8.3 kDa protein FT Rv1684 or MTCI125.06 SWALL:O33186 (EMBL:Z98268) (74 aa) FT fasta scores: E(): 2.1e-07, 57.69% id in 52 aa. Note: Two FT possible alternative start codons at residues 8 or 11" FT /db_xref="InterPro:IPR005651" FT /db_xref="UniProtKB/TrEMBL:Q6NHG3" FT /protein_id="CAE49695.1" FT /translation="MPFEIGTMPIMSIDPKLLEVLACPQDKGPLKYLEAEQVLVNERLE FT IAYRIDDGIPVMLVDESIAWPPAEK" FT CDS 130882..132144 FT /transl_table=11 FT /gene="tyrS" FT /locus_tag="DIP1176" FT /product="tyrosyl-tRNA synthetase" FT /EC_number="6.1.1.1" FT /note="Similar to Mycobacterium tuberculosis tyrosyl-tRNA FT synthetase TyrS or Rv1689 or MT1728 or MTCI125.11 FT SWALL:SYY_MYCTU (SWALL:O33191) (424 aa) fasta scores: E(): FT 8.5e-103, 62.67% id in 418 aa, and to Bacillus subtilis FT tyrosyl-tRNA synthetase 1 TyrS SWALL:SYY1_BACSU FT (SWALL:P22326) (422 aa) fasta scores: E(): 1.3e-69, 45.49% FT id in 422 aa" FT /db_xref="GOA:Q6NHG2" FT /db_xref="InterPro:IPR002305" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHG2" FT /protein_id="CAE49696.1" FT /translation="MNIIDELQWRGLINQSTDIDALREACEKPITLYCGFDPTGDSLHA FT GHLVPMIMLRRFQEAGHRPITLAGGATGFIGDPRDVGERSMLSQDTIEHNLESIKKQLR FT SFVRFDGDSPAIMVNNADWTMSMSVVDFLRDVGKNFSLNTMLDRETVKRRLETDGISYT FT EFSYMLLQANDFVQLNREYDCVLQIGGGDQWGNIVSGVDLNRRVSGTKTHALTVPLVTD FT AQGQKFGKSTGGGKLWLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAELET FT EVRERPHLRAAQRRLAQEMTDLVHGHDATVSVELAAQALFGRASLQDLDEATLDGALSE FT TVIFEVPAGESPTIIDLLIGAGLVDSKGAARRTIKEGGAYVNNERIESEDWQPTDDVLL FT HGAWLVLRKGKKNFAGVKYSA" FT misc_feature 130960..131847 FT /note="HMMPfam hit to PF00579, tRNA synthetases class I (W FT and Y)" FT misc_feature 130993..131025 FT /note="ScanRegExp hit to PS00178, Aminoacyl-transfer RNA FT synthetases class-I signature." FT misc_feature 131005..131073 FT /note="FPrintScan hit to PR01040, Tyrosyl-tRNA synthetase FT signature" FT misc_feature 131356..131403 FT /note="FPrintScan hit to PR01040, Tyrosyl-tRNA synthetase FT signature" FT misc_feature 131419..131487 FT /note="FPrintScan hit to PR01040, Tyrosyl-tRNA synthetase FT signature" FT misc_feature 131518..131556 FT /note="FPrintScan hit to PR01040, Tyrosyl-tRNA synthetase FT signature" FT rRNA 132798..134189 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT /note="EMBL:X82059" FT rRNA 134649..137733 FT /gene="23S rRNA" FT /product="possible 23S ribosomal RNA" FT rRNA 137873..137993 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT /note="EMBL:X55255" FT CDS 138094..139170 FT /transl_table=11 FT /locus_tag="DIP1177" FT /product="Conserved hypothetical protein" FT /note="C-terminal region similar to Mycobacterium FT tuberculosis CDC1551 conserved hypothetical protein MT1730 FT SWALL:AAK45999 (EMBL:AE007035) (250 aa) fasta scores: E(): FT 4e-32, 47.73% id in 243 aa, and to Streptomyces coelicolor FT hypothetical 22.8 kDa protein SCI51.30c SWALL:Q9S210 FT (EMBL:AL109848) (210 aa) fasta scores: E(): 3.1e-24, 49.17% FT id in 181 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHG1" FT /protein_id="CAE49699.1" FT /translation="MADSSSRSSHDGPRRSNEGRPRGGSYGKKRSEGGKPRRFGNQTSE FT SRRGQGHGKRWEKQDGDRRSYRGDSANSQRRHDRDGGEWKRGDRKDYHSDRGNRFESKG FT QKRQHSQRGGSDRDKHFNGPMRSGYREERITKRLNEPALPADIDVRDLDPMVLQDLKVL FT AKDNADAVAKHMIMAAVWMSEDPELALKHARAAKDRAGRVAIARETCGIAAYHAGEWKE FT ALSELRAARRMSGGPGLIAVMADCERGLGRPEKAIELARNEDAKHLDHETRIELAIVVA FT GARLDLGQPESAVATLESMNPKENASGLEAARLSYAYADALLQAGRKEDANRWFTICKE FT QDIDETTDVVDRLESLAH" FT CDS 139247..140203 FT /transl_table=11 FT /locus_tag="DIP1178" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT1731 SWALL:AAK46000 FT (EMBL:AE007035) (353 aa) fasta scores: E(): 1e-33, 41.06% FT id in 302 aa, and to Streptomyces coelicolor hypothetical FT 35.2 kDa protein SCI51.28c SWALL:Q9S212 (EMBL:AL109848) FT (343 aa) fasta scores: E(): 4e-32, 39.4% id in 302 aa" FT /db_xref="GOA:Q6NHG0" FT /db_xref="InterPro:IPR006357" FT /db_xref="UniProtKB/TrEMBL:Q6NHG0" FT /protein_id="CAE49701.1" FT /translation="MLFDLDGTVWEGGRALPFAVDSINQVNLPLMYVTNNASRGPEVVA FT SLLSDMGIFTQPEQVLTSAQAAIDLALKEVPVGSNVLVLGTDSFKSLAAEAGYMVVNSA FT DMEPVAVFHGHNPATSWTELSEAALAIRCGAKYYASNLDTTLPSERGLCVGNGSMVAAV FT VSATGVQPVSAGKPEAAMFHVAAEKLASERPLAVGDRLNTDIAGGVAAGFDTLHLLTGV FT SQHWALVHAIESERPTLIAEDLRALSSDRSVLMPQLQGDFNAYLQGTEIVLNGGSTAST FT STEALRSVLSVAWQSAEFGGTVKPVSEHAIRCMSEWR" FT misc_feature 139247..139909 FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT CDS 140221..140382 FT /transl_table=11 FT /locus_tag="DIP1179" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHF9" FT /protein_id="CAE49702.1" FT /translation="MEIPKPYDPQNDSLSPSQIASDISELLAQNPNNLHDEAQLLTRAH FT SLLHDALS" FT CDS 140424..141245 FT /transl_table=11 FT /locus_tag="DIP1180" FT /product="Putative cytotoxin/hemolysin" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT cytotoxin/hemolysin MT1733 SWALL:AAK46002 (EMBL:AE007035) FT (268 aa) fasta scores: E(): 2.2e-53, 56.56% id in 274 aa, FT and to Caulobacter crescentus hemolysin A CC1324 FT SWALL:Q9A8M9 (EMBL:AE005808) (243 aa) fasta scores: E(): FT 1.2e-29, 42.27% id in 246 aa" FT /db_xref="GOA:Q6NHF8" FT /db_xref="InterPro:IPR002877" FT /db_xref="UniProtKB/TrEMBL:Q6NHF8" FT /protein_id="CAE49703.1" FT /translation="MQSRKRLDAELVRRKIARSREQAVEMIKDGRVHVQGFVAKKPATQ FT VTPEASIRVEDAGLDDWASRGAHKLLGALAEFKSKGLNVSGRRALDAGASTGGFTDVLL FT RESASEVVAVDVGYGQLIWRLQNDARVKVLDRTNIRNLSLEITDGPCDLMVGDLSFISL FT KLTLPAIAACMSDGADLLPMVKPQFEVGKERLGHGGVVRDPKLRAEVTEDIALFAQQLG FT LSFVDVVASPLPGPSGNVEYFLWLKKDSGRSAKGLHEIHEKVAEAVQKGPQ" FT misc_feature 140436..140579 FT /note="HMMPfam hit to PF01479, S4 domain" FT misc_feature 140436..140612 FT /note="HMMSmart hit to SM00363, S4 RNA-binding domain" FT misc_feature 140607..141173 FT /note="HMMPfam hit to PF01728, FtsJ-like methyltransferase" FT CDS 141245..142198 FT /transl_table=11 FT /gene="ppnK" FT /locus_tag="DIP1181" FT /product="inorganic polyphosphate/ATP-NAD kinase" FT /EC_number="2.7.1.23" FT /note="Similar to Mycobacterium tuberculosis inorganic FT polyphosphate/ATP-NAD kinase PpnK or Rv1695 or MT1734 or FT MTCI125.17 SWALL:PPNK_MYCTU (SWALL:O33196) (307 aa) fasta FT scores: E(): 2.5e-57, 53.79% id in 303 aa, and to FT Escherichia coli probable inorganic polyphosphate/ATP-NAD FT kinase PpnK or B2615 SWALL:PPNK_ECOLI (SWALL:P37768) (292 FT aa) fasta scores: E(): 6e-17, 33.04% id in 233 aa" FT /db_xref="GOA:Q6NHF7" FT /db_xref="InterPro:IPR002504" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHF7" FT /protein_id="CAE49705.1" FT /translation="MTIDCHEDRRVLLVPHTGRPQNVASAALAAELLDDSGVGVRVLVP FT AEDTTVATHPVLGQFERVSHSPQATQSVDLVLVLGGDGTFLRAADLAHGADLPVLGINL FT GHVGFLAEWEKDSLDEAVRRVTKGSFRIEERMTLDVSVYDSNGTAIGRGWALNEVSIEN FT SNRSGVLDATLEIDSRPVSSFGCDGIIVSTPTGSTAYAFSAGGPVLWPELDAILVVPNN FT AHALFTKPLVVSPRSSVAVESHPSAFPATAVMDGFRSISVPPGARVEVKRGSRSIKWVR FT LDDIPFTDRLVTKLRLPVEGWRGPKNMIPQINPHSA" FT misc_feature 141398..142114 FT /note="HMMPfam hit to PF01513, Domain of unknown function FT DUF15" FT CDS 142314..144053 FT /transl_table=11 FT /gene="recN" FT /locus_tag="DIP1182" FT /product="DNA repair protein" FT /note="Similar to Mycobacterium tuberculosis DNA repair FT protein RecN or Rv1696 or MT1735 or MTCI125.18 FT SWALL:RECN_MYCTU (SWALL:O33197) (587 aa) fasta scores: E(): FT 1.9e-53, 47.99% id in 598 aa, and to Streptomyces FT coelicolor DNA repair protein RecN or SCI51.20c FT SWALL:RECN_STRCO (SWALL:Q9S220) (572 aa) fasta scores: E(): FT 1.2e-54, 45.64% id in 585 aa, and to Bacillus subtilis DNA FT repair protein RecN SWALL:RECN_BACSU (SWALL:P17894) (576 FT aa) fasta scores: E(): 2.5e-38, 32.31% id in 591 aa" FT /db_xref="GOA:Q6NHF6" FT /db_xref="InterPro:IPR018177" FT /db_xref="UniProtKB/TrEMBL:Q6NHF6" FT /protein_id="CAE49706.1" FT /translation="MLSDITIHNLGVIPSASLELSEGLTVLTGETGAGKTMVVTGLRLL FT AGGRAEAQRVRSGSSQAVVEGRFLLDSVAPESAEMARAVVSAAGGALDENGEVIVSRTV FT SAHGRSRAHLGGRSVPAASLVEFSKEVLTIHGQNDQLRLLNSDRQRDALDRFSQKISAL FT MTVYSEAYRAWKNLSKDLQERQASKRELAQEVDRLEFAIREISEVDPQPGEEADLLVQI FT ARLQDVDDLRAQAVGALSVIDGAAGVEGYATCDSSDADAASDLIGQALSSVRVSSDPTL FT QGVSQQLEAVTSILMEVSAQLGGFLDELPADPQMLDKLLQRQQALKQLTRKYASDIDGV FT IKWKLKAEQKLESIDVSPEALDQLKKETALAERKMNDAGMALRAARIEAAQELSNAVTK FT ELHGLAMPKAMFSVVVHPTEPQPSGFDEVEFCLAPNNATDPRPLASSASGGELSRVMLA FT LEVILSAGQHGNTLVFDEVDAGVGGRAAVEIGRRLARLAQNNQVIVVTHLPQVAAYADT FT HLHVAKDVGESTVTSGVEKLSEQRRVEDLARMLAGLEDTDTGRAHAKELFEKAQAENRA FT FRV" FT misc_feature 142398..142421 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 143652..143876 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature 143706..143726 FT /note="ScanRegExp hit to PS00064, L-lactate dehydrogenase FT active site." FT CDS 144164..145357 FT /transl_table=11 FT /locus_tag="DIP1183" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium leprae conserved membrane FT protein ML1361 SWALL:Q9CC30 (EMBL:AL583921) (393 aa) fasta FT scores: E(): 7.2e-57, 44.16% id in 394 aa, and to FT Mycobacterium tuberculosis hypothetical 42.4 kDa protein FT Rv1697 or MTCI125.19 SWALL:O33198 (EMBL:Z98268) (393 aa) FT fasta scores: E(): 2.9e-56, 43.4% id in 394 aa" FT /db_xref="GOA:Q6NHF5" FT /db_xref="UniProtKB/TrEMBL:Q6NHF5" FT /protein_id="CAE49708.1" FT /translation="MLTMSLFNRSADLPGIHAVTRDCSSLNRGLKRLKSGEIAVVDAPD FT ITRSIAQQLIDAKPLAVVNSGQFSTGAIPNFGPQMLIDAGIMLIDAVGHDVWTILKDGK FT KARLTEDGQIFYGEKLIASGTVITAEQAEVIFVEAQGSLIDRMEAYFGNTIQFIHAEAP FT LLIDGLGVPDRGGMLRGRKVLVVSPGTGHRTQVKGLRNFIREYEPVLIGVDAAADTLVE FT LGYKPNFIVGDPSVIGSDALRSGAQVVLPADPDGHALGLERIQDLGVGAVTFPSSVDSS FT TNLALLLADYHGAELVVNAGSPFDLDLIFADSETASPATLLTRSKLGSRLIDATAITDL FT YTVRSSTGLAWLWAILGILVAAAVIIAIAGTSGDGSFSQNLIDTWNNFALTVQSWFK" FT misc_feature 145208..145276 FT /note="1 probable transmembrane helix predicted for DIP1183 FT by TMHMM2.0" FT CDS 145382..146332 FT /transl_table=11 FT /locus_tag="DIP1184" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 32.4 kDa protein Rv1698 precursor or MT1737 or MTCI125.20 FT SWALL:YG98_MYCTU (SWALL:P58212) (314 aa) fasta scores: E(): FT 4.4e-22, 31.57% id in 304 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHF4" FT /protein_id="CAE49710.1" FT /translation="MARKSGRTATAIAGLSFGLALGIGAGMYVLAPNVAGGPNQTTSTL FT ERERDDALESAQIAKAQAKSADSVVSALGRGITTDLLKEKKVLVFRTSDSLDSDADALS FT EALKSAGAENAGTIKLGEKFFTQEGADGLKNIIATTLPAGAQLSTEKMDSGTHAGDALG FT SALLLNKDDGSEQANKEDRGIVLGALRESGYIDFDEASVKPAHAIVLLSGDSDGSKAAF FT SIKNQVSFATALKSKGSGLLVAGRIHTASDAGLLGTIRTSAQDKQAVSTIDSIDQNWAQ FT IAAILALKEQIDGKSGAYGAAGNVDATSPGIKNPE" FT misc_feature 145382..145492 FT /note="Signal peptide predicted for DIP1184 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.428 between residues 37 and 38" FT misc_feature 145418..145486 FT /note="1 probable transmembrane helix predicted for DIP1184 FT by TMHMM2.0" FT CDS 146354..146992 FT /transl_table=11 FT /locus_tag="DIP1185" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT MutT/NudXx family protein MT1739 SWALL:AAK46008 FT (EMBL:AE007036) (207 aa) fasta scores: E(): 6.7e-35, 48.3% FT id in 207 aa, and to Bacillus subtilis ADP-ribose FT pyrophosphatase NudF SWALL:ADPP_BACSU (SWALL:P54570) (185 FT aa) fasta scores: E(): 7.9e-15, 35.06% id in 154 aa" FT /db_xref="GOA:Q6NHF3" FT /db_xref="InterPro:IPR000086" FT /db_xref="UniProtKB/TrEMBL:Q6NHF3" FT /protein_id="CAE49711.1" FT /translation="MTPHSFVVTDSTLLLDAPIIAVRRDKVLMPKGNESYREIVEHYGA FT VAIVARDESGRILLIKQYRHSVGRRMWELPAGLLDIPAESELQAAQRELKEEAGLASHH FT WSCIIDLVTSPGFCDEAVRIFLADRVYAVPRPEASDEEADLTTQWVALEDAIEMIMRGK FT IVNSIAIAGIFAAREHIEHGASLPSRATEFEIRPTSLAQRHQDLTVPRR" FT misc_feature 146477..146881 FT /note="HMMPfam hit to PF00293, MutT-like domain" FT CDS 146995..147930 FT /transl_table=11 FT /gene="xerD" FT /locus_tag="DIP1186" FT /product="integrase/recombinase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT integrase/recombinase XerD MT1740 SWALL:AAK46009 FT (EMBL:AE007036) (311 aa) fasta scores: E(): 5.6e-59, 56.1% FT id in 303 aa, and to Bacillus subtilis probable FT integrase/recombinase RipX SWALL:RIPX_BACSU (SWALL:P46352) FT (296 aa) fasta scores: E(): 1.7e-35, 43.09% id in 304 aa, FT and to Escherichia coli integrase/recombinase XerD or XprB FT or B2894 SWALL:XERD_ECOLI (SWALL:P21891) (298 aa) fasta FT scores: E(): 9.3e-34, 43.68% id in 309 aa" FT /db_xref="GOA:Q6NHF2" FT /db_xref="HSSP:1A0P" FT /db_xref="InterPro:IPR011932" FT /db_xref="UniProtKB/TrEMBL:Q6NHF2" FT /protein_id="CAE49713.1" FT /translation="MGSISNIARQWLTHLAVEKGVSDNTLSNYRRDLERYTRWLQVQGI FT TDIENISAQDIERYVQELRKGDSDTGKKPLAASSAARALIVARGLHRFALLENLVENDV FT SADVSPPAMGRHLPDTLSVEEVNRLIEAIPIDDAASPENLRDCALLEFLYATGARISEA FT VGLVVDDVAAIVENEGIVRITGKGNKQRIVPVGDQCLSALERYVVRSRPAMSKGKSHAL FT FLNKRGGQLSRQSAWQILKNSAQRAGIEKDISPHTLRHSFATHLLEGGADVRVVQELLG FT HSSVTTTQIYTHVTADNLRFVWSRSHPRAH" FT misc_feature 147010..147291 FT /note="HMMPfam hit to PF02899, Phage integrase, N-terminal FT SAM-like domain" FT misc_feature 147022..147087 FT /note="Predicted helix-turn-helix motif with score 1213 FT (+3.32 SD) at aa 10-31, sequence QWLTHLAVEKGVSDNTLSNYRR" FT misc_feature 147355..147897 FT /note="HMMPfam hit to PF00589, Phage integrase family" FT CDS 148122..148991 FT /transl_table=11 FT /locus_tag="DIP1187" FT /product="Putative regulatory protein" FT /note="Similar to Mycobacterium leprae possible regulatory FT protein ML1367 SWALL:Q9CC29 (EMBL:AL583921) (287 aa) fasta FT scores: E(): 1.8e-76, 72.72% id in 275 aa, and to Bacillus FT subtilis sporulation initiation inhibitor protein Soj FT SWALL:SOJ_BACSU (SWALL:P37522) (253 aa) fasta scores: E(): FT 1.2e-44, 51.21% id in 248 aa" FT /db_xref="GOA:Q6NHF1" FT /db_xref="InterPro:IPR002586" FT /db_xref="UniProtKB/TrEMBL:Q6NHF1" FT /protein_id="CAE49714.1" FT /translation="MGESGLFDTPDQKVGLTGRPLREFPEPEPLHKHGPAKIISMCNQK FT GGVGKTTSTINLGACLAEAGRKVLLVDLDPQGALSAGLNIPHEELEITVYNLLVDRHTS FT IHQAIHHTSVDGLDLVPANIDLSAAEIQLVNEVGREQTLARALRPVMRDYDFIILDCQP FT SLGLLTVNALTCSHGVIIPMECEYFSLRGLALLTDTVEKVRDRLNFDLEIVGILVTMFD FT RRTTHAREVMSRVVEVFEDRVFDTVITRTVRFPETSVAGEPITTWAPSSQGAQQYRQLA FT REVIERTA" FT misc_feature 148476..148811 FT /note="HMMPfam hit to PF00991, ParA family ATPase" FT CDS 149034..149852 FT /transl_table=11 FT /locus_tag="DIP1188" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 30.6 kDa protein Rv1709 or MTCI125.31 SWALL:O33208 FT (EMBL:Z98268) (278 aa) fasta scores: E(): 2.2e-55, 60.31% FT id in 252 aa, and to Streptomyces coelicolor hypothetical FT 29.6 kDa protein SCI51.10c SWALL:Q9S230 (EMBL:AL109848) FT (264 aa) fasta scores: E(): 1.2e-46, 59.41% id in 239 aa" FT /db_xref="GOA:Q6NHF0" FT /db_xref="InterPro:IPR003768" FT /db_xref="UniProtKB/TrEMBL:Q6NHF0" FT /protein_id="CAE49715.1" FT /translation="MARTAVPDNQPEITGFRIVLNNFEGPFDLLLQLISAKKLDVTDVA FT LHKVTDDFVAYTRALGEFAELDEVTEFLVVAATLLDLKAARLLPRGEVDDLSDLELLES FT RDLLFARLLQYKAYKQVADQFARWQLAAQRRYPRAVGMEEQFSSLLPPVKISHTPKSFA FT ELAASVFRPKPPDTVGTSHVHGVEVSVPEQAGKVLDLLVECGEGVWMDFPDLITGCRVS FT LEVVGRFLALLELYKARAVSLEQEESLGALRVSWTGIHVDPAIVAASNWA" FT misc_feature 149130..149804 FT /note="HMMPfam hit to PF02616, Uncharacterized ACR, FT COG1354" FT CDS 149967..150572 FT /transl_table=11 FT /gene="bioD1" FT /locus_tag="DIP1189" FT /product="dethiobiotin synthetase" FT /EC_number="6.3.3.3" FT /note="Similar to Corynebacterium glutamicum dethiobiotin FT synthetase BioD SWALL:BIOD_CORGL (SWALL:P46397) (224 aa) FT fasta scores: E(): 4e-08, 38.94% id in 208 aa, and to FT Streptomyces coelicolor dethiobiotin synthetase BioD FT SWALL:Q9FCC1 (EMBL:AL391014) (238 aa) fasta scores: E(): FT 3.6e-06, 28.37% id in 222 aa. Note: Similar to the FT downstream CDS DIP1192, 222 aa; E(): 1.3e-13; 38.914% FT identity in 221 aa overlap - possible duplication" FT /db_xref="GOA:Q6NHE9" FT /db_xref="UniProtKB/TrEMBL:Q6NHE9" FT /protein_id="CAE49716.1" FT /translation="MGIVVVSGLASGVGKTTATAAIVKILQAKGRDVVPAKIARLQNLC FT ASPDIGTIEKLTGIRGEDFSQLDDPLVQVCHLSESGKTVVVEGSGGLSVALIGKKTIAD FT IAAELDAPLVVVSGMNRGAVELAVNAVGFARACGANVAGLLGGKLPAGADLRTRLTLVE FT ASRASGVPFIGSLNDGVGSLGCEPFAEALSTIFIPDEW" FT misc_feature 149967..150026 FT /note="Signal peptide predicted for DIP1189 by SignalP 2.0 FT HMM (Signal peptide probability 0.749) with cleavage site FT probability 0.733 between residues 20 and 21" FT misc_feature 149973..150524 FT /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide FT synthase" FT CDS complement(150573..152069) FT /transl_table=11 FT /locus_tag="DIP1190" FT /product="Putative peptide transport protein" FT /note="Similar to Bacillus subtilis hypothetical FT transporter YclF SWALL:YCLF_BACSU (SWALL:P94408) (492 aa) FT fasta scores: E(): 2e-53, 33.73% id in 495 aa, and to FT Neisseria meningitidis putative peptide transporter NMA0222 FT SWALL:Q9JWV5 (EMBL:AL162752) (485 aa) fasta scores: E(): FT 6.2e-47, 34.63% id in 488 aa" FT /db_xref="GOA:Q6NHE8" FT /db_xref="InterPro:IPR000109" FT /db_xref="UniProtKB/TrEMBL:Q6NHE8" FT /protein_id="CAE49717.1" FT /translation="MQLIEQRSIDSKNNRAMFWRHPRMMTSVVSIEAWERFSFYGMQAI FT LGFYLYYSIADGGLGIAKKDATALIGAYGALVYLCTFIGGWVGDHLLGAEKTLLSGAAL FT LVIGHISLSTFPGFYGLAIGLPLIAVGSGLLKTAAITVLGAVYDENPKQRETGFQFFYL FT GIQLAAFFGPLLTGWLAQQYSFHIGFIAAAFLMIIGISLYVFARPAAMASLCTQTRQRI FT TQPQLTATTTQAIFIVGGSTLALFSATFCVATGLIKPVVLATFLLALTLGAALLLYTSM FT FRSSEVTLAEKIQLLRYIPIFLASVAFWAIMNQTYGVLAVYSDVRLNRSVGDFLIPAAW FT LQSLNPFYVFILSLPLAYLWLRLGDRSPRPATKLSIGVGIAGLGFAILIPYAGGEPNST FT PFIVLAISILVTAIGELLIGPIGMAATAQYAPRKYATQFSAMFFLTMAIGTALSGHISQ FT YYNPDNAQAEARYFIACSATAMVIGIISYMLTRIITTKTQ" FT misc_feature complement(order(150603..150659,150690..150755, FT 150795..150860,150891..150947,150987..151052, FT 151134..151184,151224..151289,151302..151367, FT 151455..151520,151533..151589,151629..151694, FT 151707..151772,151794..151859,151905..151970)) FT /note="14 probable transmembrane helices predicted for FT DIP1190 by TMHMM2.0" FT misc_feature complement(150720..151187) FT /note="HMMPfam hit to PF00854, POT family" FT misc_feature complement(151446..151787) FT /note="HMMPfam hit to PF00854, POT family" FT CDS 152147..153442 FT /transl_table=11 FT /gene="bioA" FT /locus_tag="DIP1191" FT /product="adenosylmethionine-8-amino-7-oxononanoate FT aminotransferase" FT /EC_number="2.6.1.62" FT /note="Similar to Corynebacterium glutamicum FT adenosylmethionine-8-amino-7-oxononanoate aminotransferase FT BioA SWALL:BIOA_CORGL (SWALL:P46395) (423 aa) fasta scores: FT E(): 7.2e-95, 55.68% id in 422 aa, and to Escherichia coli FT adenosylmethionine-8-amino-7-oxononanoate aminotransferase FT BioA or B0774 SWALL:BIOA_ECOLI (SWALL:P12995) (429 aa) FT fasta scores: E(): 3.5e-87, 52.98% id in 419 aa" FT /db_xref="GOA:Q6NHE7" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q6NHE7" FT /protein_id="CAE49718.1" FT /translation="MENNSFAQFDRDHIWHPYGPMPATVAPYVVAATNNTDIILDNGTR FT LIDGMSSWWAAAFGHGNERLKAAAHRQIDVMSHVMFGGLTHVPAIKLARQLCELTDEPL FT TKVFFSDSGSVAVEVALKMVYQYQLGQGHPERRRMLTWRGGYHGDTFATMSLCDPEGGM FT HAMWEGRVMDNVFASRPPLWGAASNEISAYIDHLDSLIDSTIAGIIVEPVVQGAGGMRF FT HAPEILKGIRQLCDQHGILFIADEIATGFGRTGNLFATQAAKVTPDILCVGKSLTGGFM FT SLAATITTDAVAESISSAAGGGALMHGPTFMGNPLACAVASEALSIIAEGDWKQQVAEI FT ESELKKGLVPLASNPAVRDVRVLGAIGVVEMKEPVDMKRATHAAVNAGVWLRPFGRLVY FT TMPPFVCTHKQIQKISCAIASIVHTEQERFER" FT misc_feature 152195..153424 FT /note="HMMPfam hit to PF00202, Aminotransferase class-III" FT misc_feature 152870..152983 FT /note="ScanRegExp hit to PS00600, Aminotransferases FT class-III pyridoxal-phosphate attachment site." FT CDS 153455..154123 FT /transl_table=11 FT /gene="bioD2" FT /locus_tag="DIP1192" FT /product="dethiobiotin synthetase" FT /EC_number="6.3.3.3" FT /note="Similar to Corynebacterium glutamicum dethiobiotin FT synthetase BioD SWALL:BIOD_CORGL (SWALL:P46397) (224 aa) FT fasta scores: E(): 2.5e-40, 54.09% id in 220 aa, and to FT Mycobacterium leprae dethiobiotin synthetase BioD or ML1218 FT or B1170_C1_159 SWALL:BIOD_MYCLE (SWALL:P45486) (226 aa) FT fasta scores: E(): 2.4e-21, 38.96% id in 213 aa. Note: FT Similar to the upstream CDS DIP1189, 201 aa; E(): 1.3e-13; FT 38.914% identity in 221 aa overlap - possible duplication" FT /db_xref="GOA:Q6NHE6" FT /db_xref="HSSP:1A82" FT /db_xref="InterPro:IPR004472" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHE6" FT /protein_id="CAE49719.1" FT /translation="MAIVVVTGTNTDVGKTIASAAVCQHYSRQGFRVVPVKPVQTGEPK FT GSGDAQTIEKLTGIVGKCFARFPEPLAPNLSAQRAGMQQLNLEEIVNKIRELDGPQTVV FT VVEGAGGLLVRLADSFTIADVAAQLDAPLIVVTNMALGSLNAAELTVEAAQRRGLKVLG FT LIGGSMPKNPDLATSLNVAEMEKVTGIPLWGSIAEGAGQLSKEAFCQLVEDLHLPTMWP FT " FT misc_feature 153461..154072 FT /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide FT synthase" FT CDS 154240..155814 FT /transl_table=11 FT /locus_tag="DIP1193" FT /product="Putative Na+/H+ antiporter" FT /note="Similar to Streptomyces coelicolor putative Na+/H+ FT antiporter SC4A10.04c SWALL:Q9S2Y0 (EMBL:AL109663) (528 aa) FT fasta scores: E(): 1.2e-47, 39.09% id in 532 aa, and to FT Rhizobium loti Na+/H+ antiporter MLL3064 SWALL:Q98H22 FT (EMBL:AP003001) (517 aa) fasta scores: E(): 9.6e-31, 28.62% FT id in 531 aa" FT /db_xref="GOA:Q6NHE5" FT /db_xref="InterPro:IPR018422" FT /db_xref="UniProtKB/TrEMBL:Q6NHE5" FT /protein_id="CAE49720.1" FT /translation="MEILIGLLALLFATVIMVAVGDRTGLPWPVLLTLVAAGGIFLPWL FT PEVAIPEEMILPIFIPPLLWALARHSSWASIKRQWRTVVLLSVLLVIVTAVTVGLVAYL FT LVPTLSFAAAVVIGAAISPPDPVAVDAVAEPAGVPRRLSNTLQVEGLFNDAASIVVFNL FT ALSVVQSGHDITWWSALSTLVYSAAVAVVIGFVLGTGCAKLHSWMTSSVARNAFTWVIP FT FATFIAAEELHASGVIAIVIAAIQFNSKSQAGAEDRLSGSAFWQVVELLFTGVAFGLIG FT ISVRDAIHSAGANLWHGVWFGLVLALTAIAVRALWLYLLYVGNKKAGRRTGAPLRLQEV FT LLLTWGGMRGLVTLALVLSIPMTTGFAIYRELSIVALTVLLVTMVIPGLTLPALMRVLN FT LEEGPDAFGDYAREKLFVRARFAARQVLDSYSHDIPEEFMASLRRRFEHDINADEDDDD FT AMTPEERRKIQERRFALFNKVRLEALYASQAELLRARSERDVDPMIVDEVLFEIDSQII FT AAEKSTR" FT misc_feature 154240..154347 FT /note="Signal peptide predicted for DIP1193 by SignalP 2.0 FT HMM (Signal peptide probability 0.888) with cleavage site FT probability 0.384 between residues 36 and 37" FT misc_feature order(154249..154302,154321..154389,154399..154467, FT 154486..154554,154765..154833,154870..154923, FT 154933..154986,155020..155088,155131..155199, FT 155257..155325,155353..155421) FT /note="11 probable transmembrane helices predicted for FT DIP1193 by TMHMM2.0" FT misc_feature 154252..155445 FT /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger FT family" FT misc_feature 154261..154323 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature 154387..154449 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature 154480..154557 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature 154759..154827 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature 155368..155430 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT CDS 155833..156387 FT /transl_table=11 FT /locus_tag="DIP1194" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 25.3 FT kDa protein ML1369 or MLC1351.04C SWALL:O05669 FT (EMBL:Z95117) (231 aa) fasta scores: E(): 3.1e-33, 59.19% FT id in 174 aa, and to Bacillus halodurans BH1561 protein FT SWALL:Q9KCL0 (EMBL:AP001512) (197 aa) fasta scores: E(): FT 1.7e-13, 38.67% id in 181 aa" FT /db_xref="GOA:Q6NHE4" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NHE4" FT /protein_id="CAE49721.1" FT /translation="MMTVLRSQIESILLVVDQPASVAALARATEAAPETVTSVLRSMAQ FT EFEDRGSGIEVRESPEGWRLYTVKRNADVVEKFLLDGSHTKLSRAALETLAVVAYRQPA FT TRAQVAAVRGVNVDGVMRTLQLRGLIREVAINPGTEGVNGSAHRYETTELFLDLLGIDS FT LERLPDLAPLLPDIDSIDEYF" FT CDS 156491..157456 FT /transl_table=11 FT /locus_tag="DIP1195" FT /product="Putative pseudouridine synthase B" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 27.6 kDa protein Rv1711 or MT1751.1 or MTCI125.33 FT SWALL:YH11_MYCTU (SWALL:O33210) (254 aa) fasta scores: E(): FT 2.8e-52, 60.74% id in 242 aa, and to Bacillus subtilis FT ribosomal large subunit pseudouridine synthase B RluB FT SWALL:RLUB_BACSU (SWALL:P35159) (229 aa) fasta scores: E(): FT 2e-28, 46.72% id in 229 aa. Note: Alternative start codon FT at residue 55" FT /db_xref="GOA:Q6NHE3" FT /db_xref="InterPro:IPR018496" FT /db_xref="UniProtKB/TrEMBL:Q6NHE3" FT /protein_id="CAE49722.1" FT /translation="MNRTARRDGTPEKPRRGSQGGSRGDYGKPKRSHAKPQSANSGRPI FT KQRKQRDSEMLISNARPARHQHVGRREAGDGSTEGIRLQKVLAQAGVASRRHAEILIDA FT GRVEVNGKIVMTQGMRVNPNVDVIRVDGVRVNVNENLQYFVLNKPRGLQSTMSDDMGRP FT CVGDIVGERISAGQRLFHVGRLDAATEGLLLLTNDGELANRLMHPRYEVSKTYLATVLG FT EADKRLVKQLRDGIELDDGPAKADLVQIIDTFQGKSLIRIELHEGRKHIVRRMLKTAGF FT PVQRLVRTKIHTIQLGEQTPGAIRALNSSELASLYKAVGM" FT misc_feature 156731..156871 FT /note="HMMPfam hit to PF01479, S4 domain" FT misc_feature 156731..156916 FT /note="HMMSmart hit to SM00363, S4 RNA-binding domain" FT misc_feature 156914..157324 FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase" FT misc_feature 157037..157081 FT /note="ScanRegExp hit to PS01149, Rsu family of FT pseudouridine synthase signature." FT CDS 157458..158183 FT /transl_table=11 FT /gene="cmk" FT /locus_tag="DIP1196" FT /product="cytidylate kinase" FT /EC_number="2.7.4.14" FT /note="Similar to Mycobacterium tuberculosis cytidylate FT kinase Cmk or Rv1712 or MT1752 or MTCI125.34 FT SWALL:KCY_MYCTU (SWALL:O33211) (230 aa) fasta scores: E(): FT 1.9e-35, 55.45% id in 220 aa, and to Escherichia coli FT cytidylate kinase Cmk or MssA or B0910 or Z1256 or ECS0993 FT SWALL:KCY_ECOLI (SWALL:P23863) (227 aa) fasta scores: E(): FT 9.7e-25, 43.54% id in 209 aa" FT /db_xref="GOA:Q6NHE2" FT /db_xref="HSSP:1KDO" FT /db_xref="InterPro:IPR011994" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHE2" FT /protein_id="CAE49723.1" FT /translation="MSTADSTALSNMPEGGLIVAVDGPSGAGKSTVCRRIASMLGAKYL FT DTGAMYRVATLHVLRQGINPSDTTAVVQATRELPLSVNDDPASREVILDGEDVSNEIRG FT RLVTQNVSAVAAILEVRENLVALQRELAATAHRCVVDGRDIGSTVLVDAPVKIFLTASA FT EVRAQRRYDQDVAAGRLTDLATVLADVKRRDELDSNRSVSPLAPASDATVVDTSTLTLD FT QVVDTLMTLIEKSAERTAR" FT misc_feature 157503..157556 FT /note="FPrintScan hit to PR00988, Uridine kinase signature" FT misc_feature 157509..157586 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 157524..157547 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 157671..158147 FT /note="HMMPfam hit to PF02224, Cytidylate kinase" FT misc_feature 157947..157979 FT /note="FPrintScan hit to PR00988, Uridine kinase signature" FT CDS 158180..159823 FT /transl_table=11 FT /gene="engA" FT /locus_tag="DIP1197" FT /product="Putative GTP-binding protein" FT /note="Similar to although longer in its N-terminal region FT than Mycobacterium tuberculosis probable GTP-binding FT protein EngA or Rv1713 or MT1753 or MTCI125.35 FT SWALL:ENGA_MYCTU (SWALL:O33212) (463 aa) fasta scores: E(): FT 4e-97, 58.78% id in 461 aa, and to Bacillus subtilis FT probable GTP-binding protein EngA SWALL:ENGA_BACSU FT (SWALL:P50743) (436 aa) fasta scores: E(): 1.2e-53, 40.5% FT id in 432 aa" FT /db_xref="GOA:Q6NHE1" FT /db_xref="InterPro:IPR016484" FT /db_xref="UniProtKB/TrEMBL:Q6NHE1" FT /protein_id="CAE49724.1" FT /translation="MSNAHNAPLGGNNSSDEDQETVFVYHTAHGEVDAQEAFVEEDVVV FT DGAGYASDGFDENDFDFDFEHDSEGNVVFDEADFGEADFGEDYTDEDWEELERAFGVGS FT RAIESENLCTVAIVGRPNVGKSSLVNRFLGRREAVVEDFPGVTRDRISYLADWGGRRFW FT VQDTGGWDPNVKGIHAVIARQAETAMATADVIVMVVDTKVGITETDSVMARKLQKSEVP FT VILVANKFDSDSQYADMAEFYALGLGDPWPVSAQHGRGGADVLEQILAAFPETPRATSI FT VEGPRRVALVGKPNVGKSSLLNKMSGEDRSVVDNVSGTTVDPVDSIVKLDKHLWKFIDT FT AGLRKKVKNAQGHEYYASLRTRGVIDAAEICIFMIDSSEPVSEQDQRVLAMILDAGKAL FT VLVFNKWDLMEEDRRWELEREIDLQLAHIPWVKRINISAKTGRALQRLEPYMLEALESW FT DKRVTTGQLNNWLRATIAQNPPPMKGGRVPRVLFATQASTQPPTIVLFTTGFLDAGYRR FT YLERKFRESFGFEGSPVKIAVRVRERRSKK" FT misc_feature 158516..158581 FT /note="FPrintScan hit to PR00449, Transforming protein P21 FT ras signature" FT misc_feature 158534..158557 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 158720..159514 FT /note="HMMPfam hit to PF01926, GTPase of unknown function" FT misc_feature 158834..158875 FT /note="FPrintScan hit to PR00449, Transforming protein P21 FT ras signature" FT misc_feature 159041..159103 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature 159053..159076 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 159107..159163 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature 159188..159235 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT CDS 160055..161440 FT /transl_table=11 FT /gene="dcuB" FT /gene_synonym="genf" FT /locus_tag="DIP1198" FT /product="anaerobic C4-dicarboxylate transporter" FT /note="Similar to Escherichia coli anaerobic FT C4-dicarboxylate transporter DcuB or GenF or B4123 or Z5725 FT or ECS5105 SWALL:DCUB_ECOLI (SWALL:P14409) (446 aa) fasta FT scores: E(): 4.3e-91, 54.5% id in 444 aa, and to Wolinella FT succinogenes C4-dicarboxylate membrane transporter DcuB FT SWALL:Q9ZEN8 (EMBL:AJ131242) (452 aa) fasta scores: E(): FT 4e-94, 54.12% id in 449 aa" FT /db_xref="GOA:Q6NHE0" FT /db_xref="InterPro:IPR004668" FT /db_xref="UniProtKB/TrEMBL:Q6NHE0" FT /protein_id="CAE49725.1" FT /translation="MLASILDPTSGIALLLQIAVILSCLVLGTRYGGMGLGLISGIGLF FT ILAFIFGLKPGEPPVSVMLTIIAVIGCAATLQQARGLDVMMQFAEKILRKHPERITILA FT PITTWLLTVLCGTGHVVYTMFPIIEDIAIKTNIRPERPMAVSSTAAQMGITASPVSVAI FT VSLTSILAEHAGVTQSAYSIPQILAVAMPASLCGVLVAAVWSLHRGKDLDKDEAFQERL FT KDPEFKKSVYSESHSLIGQRFEKGAYRATGIFLGAIAIVVLLGAIEWLRPSFPNSNGDL FT KPLSMNLVIQMIMLVAGALMMLLCKVEPGKIASTTVFKAGMTAVFSVFGVAWMADTFFQ FT AHLDSLVDALSGVVQSHAWAYALVLLLVSKLVNSQGAAIVAIVPLGLKLGLDPATVIGF FT IGAAYGYFILPTYPSDLACIGFDKTGTTRIGKYVLNHSFIIPGFICVIVSCIVGTVLAQ FT VLL" FT misc_feature order(160088..160141,160154..160213,160232..160291, FT 160370..160438,160499..160567,160595..160663, FT 160790..160858,160901..160969,160988..161056, FT 161099..161167,161186..161254,161366..161434) FT /note="12 probable transmembrane helices predicted for FT DIP1198 by TMHMM2.0" FT CDS complement(161471..162475) FT /transl_table=11 FT /locus_tag="DIP1199" FT /product="Putative methyltransferase" FT /note="Similar to, although longer in its N-terminal region FT than Mycobacterium tuberculosis putative methyltransferase FT Rv3342 or MT3445 or MTV016.42 SWALL:YX42_MYCTU FT (SWALL:O53392) (243 aa) fasta scores: E(): 2e-16, 31.71% id FT in 227 aa, and to Pseudomonas aeruginosa hypothetical FT protein PA0558 SWALL:Q9I5X8 (EMBL:AE004492) (255 aa) fasta FT scores: E(): 8.9e-11, 28.06% id in 253 aa" FT /db_xref="GOA:Q6NHD9" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q6NHD9" FT /protein_id="CAE49726.1" FT /translation="MEIHSSAAAEVFPVCRSLLGKLPAHSHNRSVAPTVCDYYPQIMKT FT YNSKMTTQHSSDIRNSQNISASFVTPHDAPVTSRKYVPKFNSNNHRIKTAAAFEKGSDI FT YHAVRPNYPNSVIELLNLSPNSRVLDIGCGTGKLTEQIAQQTSSVYALDPSKDMLDSFR FT STLDIPSWQATAEQTAVSDSRFSTLTCAQTWHWVEPLAASAELDRISTDDAQLLLVWNT FT LDVSVPWVHRLSRIMHSGDTLAEGFIPHVAQPWELVSVLRGKHAQELYPDQIHTLAHTR FT SYWLRASEKTREKLTHNLSWYLTDHLELPSTSLVEIPYRFDAFLYKKALVKTQ" FT misc_feature complement(161978..162115) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT CDS 162474..163724 FT /transl_table=11 FT /locus_tag="DIP1200" FT /product="Putative membrane protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 45.7 kDa protein in lysI 3'region SWALL:YLI2_CORGL FT (SWALL:P35866) (426 aa) fasta scores: E(): 4.7e-68, 46.93% FT id in 424 aa, and to Mycobacterium tuberculosis FT hypothetical 51.8 kDa protein Rv1639c or MTCY06H11.03c FT SWALL:P94973 (EMBL:Z85982) (489 aa) fasta scores: E(): FT 1.8e-16, 23.89% id in 385 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHD8" FT /protein_id="CAE49727.1" FT /translation="MSRVLSISLTQPLMMWFFMGLCVVSLLMIVYAVWRPWRVKGVVIT FT LVAITVGAFAAKIIVEKLWRPFPDSIPISIYFAVALTVIALFATMFIRRRILLFIALCL FT SLVGSAGVANLTYQLYPDLRSLVPVEVAREMSYSEFAHVSKAPTAQGREIGAKVTFSLV FT GEKSSFPARDAIAYIPPSYWTKQADSLPVLVLMAGSPGSPSDWFESARVDTVADEYQRT FT HDGKSPIVISVDATATLGGDPLCVDGPEFKVMTYLTQDVPTGIKNAFKVNSDQSQWTIG FT GLSYGGTCSFQVITNHPSAYGHFLDFSGQDELVSGTHEQTLAKFFGGDQKRYDDSNPAA FT ILKKYSDGNRFGSISGVFVAGSQDAESQKGLKRLNDLAQHAGMHTQYLEVPGGHDFGTW FT REAIRATFALSAQYGGL" FT misc_feature 162474..162569 FT /note="Signal peptide predicted for DIP1200 by SignalP 2.0 FT HMM (Signal peptide probability 0.959) with cleavage site FT probability 0.556 between residues 32 and 33" FT misc_feature order(162516..162575,162594..162653,162681..162749, FT 162762..162830) FT /note="4 probable transmembrane helices predicted for FT DIP1200 by TMHMM2.0" FT misc_feature 163044..163370 FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT tRNA 163829..163902 FT /gene="tRNA-Pro" FT /product="transfer RNA-Pro" FT /anticodon=(pos:163863..163865,aa:Pro) FT /note="tRNA Pro anticodon GGG, Cove score 62.21" FT CDS complement(164097..164474) FT /transl_table=11 FT /locus_tag="DIP1201" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SCI52.19 SWALL:Q9AD90 (EMBL:AL590507) FT (124 aa) fasta scores: E(): 2.7e-20, 49.58% id in 121 aa, FT and to Escherichia coli hypothetical protein YchJ or B1233 FT SWALL:YCHJ_ECOLI (SWALL:P37052) (152 aa) fasta scores: E(): FT 7.6e-15, 38.71% id in 124 aa" FT /db_xref="InterPro:IPR004027" FT /db_xref="UniProtKB/TrEMBL:Q6NHD7" FT /protein_id="CAE49728.1" FT /translation="MMNCPCGSGTSYSDCCQPFHTKAKNAPTAELLMRSRYSAFVLGNE FT EYLLYSWAPETAPHSLNLEEFIMWRGLTIHQSYHGGLFDSTGIVEFTARYAVCGQLQSQ FT HETSHFRRHDGRWVYVDGDLH" FT misc_feature complement(164415..164468) FT /note="HMMPfam hit to PF02810, SEC-C motif" FT CDS complement(164481..165668) FT /transl_table=11 FT /locus_tag="DIP1202" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT RA1044 or SMA1898 SWALL:AAK65702 (EMBL:AE007290) (408 aa) FT fasta scores: E(): 8.8e-49, 39.34% id in 399 aa, and to FT Clostridium acetobutylicum alpha/beta superfamily hydrolase FT CAC3665 SWALL:AAK81587 (EMBL:AE007861) (265 aa) fasta FT scores: E(): 2.6e-07, 22.43% id in 263 aa" FT /db_xref="GOA:Q6NHD6" FT /db_xref="InterPro:IPR003718" FT /db_xref="UniProtKB/TrEMBL:Q6NHD6" FT /protein_id="CAE49729.1" FT /translation="MHSRSVKFPSSKGHQIAGTIDFPDGTPRAFAMFAHCFTGSRFTPG FT AARVSKELAERGIACLRFDFPGLGQSEGIFSETSFSENVADIKAAADWLGQHYSAPQLL FT IGHSLGGAASLKAATTLKCLRGVATIGAPFDPAHAVLHFADRIGEVDENGAVTLTLGGR FT DITISREFLEDLADTNPEAYLPRLRKPLLILHSPIDQTVGVDNAQLIFRTTRYPKSLVA FT LDKVDHLLTKQGSAQQAARIINTWFEQHIVAENEDPNADTLPEGVAVAQSIPAGKFADI FT VHTGTHSFTTDREKALGGKNLGVSPTSLLISALAAATSQEIRLAAKESRIHSLEDVNVT FT ISKTVGDGERVHLRRNISLVGDLTDDERHELLLAARNSDIEKMLQGNVTINDQDV" FT misc_feature complement(165300..165584) FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT CDS 165937..168231 FT /transl_table=11 FT /gene="secA2" FT /locus_tag="DIP1203" FT /product="Putative preprotein translocase" FT /note="Similar to Mycobacterium tuberculosis preprotein FT translocase SecA 2 subunit SecA2 or Rv1821 or MT1869 or FT MTCY1A11.22c SWALL:SEA2_MYCTU (SWALL:Q50612) (808 aa) fasta FT scores: E(): 7.8e-144, 52.94% id in 765 aa, and to Bacillus FT subtilis preprotein translocase SecA subunit SecA or Div+ FT SWALL:SECA_BACSU (SWALL:P28366) (841 aa) fasta scores: E(): FT 2.7e-72, 35.36% id in 738 aa" FT /db_xref="GOA:Q6NHD5" FT /db_xref="InterPro:IPR011116" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHD5" FT /protein_id="CAE49730.1" FT /translation="MAGFRWFWDAMGGKNTRNQTKSKNIVAQAAKRGVQFASLSDADVV FT ARAHECAQHSDDESRADLLALLSIGAQRSLSMNPFNVQLQAVLRILEGDVIHMATGEGK FT TLVGAMASVGYALQGKRVHSITVNDYLAERDAEWMGDLVRYFGLTVSAVTESLNTEQRR FT RAYASSIVYAPVTEIGFDVLRDQLVTQRSHAVQNGADVAIVDEADSVLIDEALVPLVLA FT GNEPGTAPAGRITEIVRRLKENEHYSVDADRRNVSLNDKGAALLEQVLGIQSLYDDAHI FT GTTLVQVNLALHAQALLIRDVHYIIRDGKIALIDASKGRVAQLQRWPDGVQAAVEAKEG FT LVVTEGGRILDTLTLQSLMGRYPIVCGMTGTAVEATDQLRQFYDLRVSVIEPHKQSQRF FT DEADRVYATQAEKFRALVKEIELLHTTGQPVLIGTSDVSESEELAQALQARDITVNVLN FT AKNDAEEAQIIAEAGDIGRVTVSTQMAGRGTDIRLGGANEKDRDAVVAKGGLAVIGSSR FT HRSSRLDNQLRGRAGRQGDPGLSLFFVSLEDDVVVVGGAGEEIKALPDADGRIDSKRIT FT DFVAHCQRVTEGQLLEIHSQTWKYNKLLADQRVIIDERRARLLDTDQAWVELSEAVPEK FT AHKLSDKLDPAILVQAAREVMLYHLDRCWSDHLALMDHVRESIHLRTIARETPLDEYHR FT IAVREFKQLAQRAVDLAVETFRDVTIDQDGAHLADAGLTRPSATWTYMVSDNPLSNNNR FT SVINGIGSIFR" FT misc_feature 166111..166185 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 166144..167184 FT /note="HMMPfam hit to PF01043, SecA protein, amino terminal FT region" FT misc_feature 166225..166269 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 166273..166305 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 166432..166494 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 166885..166953 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 166996..167049 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 167257..167541 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT misc_feature 167368..167415 FT /note="ScanRegExp hit to PS01312, Protein secA signatures." FT CDS 168398..168829 FT /transl_table=11 FT /locus_tag="DIP1204" FT /product="Putative signal transduction protein" FT /note="Similar to Mycobacterium smegmatis putative signal FT transduction protein GarA SWALL:Q9RP36 (EMBL:AF173844) (158 FT aa) fasta scores: E(): 6.6e-34, 68.21% id in 151 aa, and to FT Mycobacterium tuberculosis hypothetical 17.3 kDa protein FT Rv1827 or MT1875 or MTCY1A11.16c SWALL:YI27_MYCTU FT (SWALL:Q50606) (162 aa) fasta scores: E(): 3.7e-32, 67.83% FT id in 143 aa" FT /db_xref="GOA:Q6NHD4" FT /db_xref="InterPro:IPR000253" FT /db_xref="UniProtKB/Swiss-Prot:Q6NHD4" FT /protein_id="CAE49731.1" FT /translation="MSDNTGAPDVQVETTSVFRADLLKEMESGAGAATASGSDVTPPAG FT AGMLVVKRGPNAGARFLLDRPTTTAGRHPESDIFLDDVTVSRRHAEFRRQDGSFEVVDV FT GSLNGTYVNREPRNSEVLSSGDEVQIGKFRLVFIEGPRA" FT misc_feature 168596..168748 FT /note="HMMSmart hit to SM00240, Forkhead associated domain" FT misc_feature 168599..168748 FT /note="ProfileScan hit to PS50006, Forkhead-associated FT (FHA) domain profile." FT misc_feature 168599..168790 FT /note="HMMPfam hit to PF00498, FHA domain" FT CDS 169000..169677 FT /transl_table=11 FT /locus_tag="DIP1205" FT /product="Putative merR-family regulatory protein" FT /note="Similar to Streptomyces coelicolor hypothetical 26.5 FT kDa protein SC1A8A.03c SWALL:Q9KZP9 (EMBL:AL353861) (246 FT aa) fasta scores: E(): 1.4e-27, 41.44% id in 222 aa, and to FT Mycobacterium tuberculosis hypothetical 26.4 kDa protein FT Rv1828 or MT1876 or MTCY1A11.15c SWALL:YI28_MYCTU FT (SWALL:Q50605) (247 aa) fasta scores: E(): 1.2e-14, 40.25% FT id in 236 aa" FT /db_xref="GOA:Q6NHD3" FT /db_xref="InterPro:IPR000551" FT /db_xref="UniProtKB/TrEMBL:Q6NHD3" FT /protein_id="CAE49732.1" FT /translation="MSIGVVLAKITAEFPDVTVSKIRYLESEGLITPQRTSTGYRRFTQ FT DDVERLRYILVTQRDNYLPLKVIREQLEAMDSGAVTPISRGSDNAPLISPESFRTSVVT FT RLSDSDVAARAQVSESEVSELAEAGLIRPDSSGFFTADDVQVVSVAVQLKEFGFDVRHL FT KSLRNLASRHADLISRATTPVARSQSESARQRAEEMSQQLSALVVSLNATMLRSMLRDE FT LNR" FT misc_feature 169000..169224 FT /note="HMMSmart hit to SM00422, helix_turn_helix, mercury FT resistance" FT misc_feature 169033..169128 FT /note="HMMPfam hit to PF00376, Bacterial regulatory FT proteins, merR family" FT CDS 169700..170287 FT /transl_table=11 FT /locus_tag="DIP1206" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 18.1 FT kDa protein ML2074 or MLCB1788.34c SWALL:O32917 FT (EMBL:AL008609) (164 aa) fasta scores: E(): 7.8e-13, 32.02% FT id in 153 aa, and to Mycobacterium tuberculosis FT hypothetical 18.1 kDa protein Rv1829 or MT1877 or FT MTCY1A11.14c SWALL:YI29_MYCTU (SWALL:Q50604) (164 aa) fasta FT scores: E(): 9.1e-13, 34.07% id in 135 aa" FT /db_xref="InterPro:IPR003729" FT /db_xref="UniProtKB/TrEMBL:Q6NHD2" FT /protein_id="CAE49733.1" FT /translation="MAFRQVEYKGVHFFPPEDDACLVFSWSERRRILPIWVDVEEGIRL FT SERSEHGAPRRPLAHDVLIETINRMGGSVEAIRVVSYYEGVFICSLVLDNQEEIDCRPS FT DAIAISELIGVAISVDDEVLNQASVFVPESDMEAYLGFVFPKDVHDELDSDPTKSQADA FT DFSNLMESLGVSEQDLLGSDDFGDDSFDLGDS" FT misc_feature 169706..170104 FT /note="HMMPfam hit to PF02577, Uncharacterized ACR, FT COG1259" FT CDS 170439..170999 FT /transl_table=11 FT /locus_tag="DIP1207" FT /product="Putative transcriptional regulator" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 24.0 kDa protein Rv1830 or MT1879 or MTCY1A11.13c FT SWALL:YI30_MYCTU (SWALL:Q50603) (225 aa) fasta scores: E(): FT 1.5e-41, 72.98% id in 174 aa, and to Bacillus subtilis FT regulatory protein GlnR SWALL:GLNR_BACSU (SWALL:P37582) FT (135 aa) fasta scores: E(): 0.22, 29.16% id in 72 aa" FT /db_xref="GOA:Q6NHD1" FT /db_xref="InterPro:IPR000551" FT /db_xref="UniProtKB/TrEMBL:Q6NHD1" FT /protein_id="CAE49734.1" FT /translation="MEEMRDNDVPVQQALFDMGPDEEVGYRVPIACQVAGITYRQLDYW FT ARTKLVEPTIRTARGSGSQRLYSFKDILVLKIVKRLLDTGISLQNIRLAVDKLRNRGVD FT DLAEITLVSDGTTVYECRSNEEVIDLLGGGQGVFGIAVPGIVRELTGTISSFPSEKISD FT FLSNSPAAGGIDELAARRLRKTS" FT misc_feature 170514..170732 FT /note="HMMSmart hit to SM00422, helix_turn_helix, mercury FT resistance" FT stem_loop complement(171017..171063) FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(171075..172487) FT /transl_table=11 FT /locus_tag="DIP1208" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR002035" FT /db_xref="UniProtKB/TrEMBL:Q6NHD0" FT /protein_id="CAE49735.1" FT /translation="MAKHSDGKNNYRLSPSVIAIAIVIVLVAAGVFLWTQAKREDSAKS FT SCINGNLTLPIATNNKEVASQIIDAYNSSGRVTRDYCVRAELTDSVAHAGVYLSDESDH FT QVNQVLSAEKRSPATLEWPTAATDQVGIARREDATEDAPVTYPVKSDAVSSALVAAFTH FT NNDASAATKMLRDFSETTIDSAVAQSAPKIVVSKSETPQGYSFEEIQNLSKPLRAVALN FT PTDSVNEEVVRAGADFGTAIAANTPDAQKPQKLSQEVATAAEILASLTDSSPAVDSQSN FT QSPRDILMLLDTSEYINGVSTDGIRWFDAASHGLINLAQKQEERGKAIGLWNYSSPLTP FT GITQGWRSNLNFDTLDAARQVKDVLGNFGTGGQPQTLAATSAALNYAVEHAQHAGNTSV FT VIVFTGTNDSFTGLAESVRKAQESHVSLHAIQIGDGQDDTNIAQAAKDTNGSYVHATSA FT AELDRAIASTTK" FT misc_feature complement(171078..171632) FT /note="ProfileScan hit to PS50234, VWFA domain profile." FT misc_feature complement(171078..171638) FT /note="HMMSmart hit to SM00327, von Willebrand factor (vWF) FT type A domain" FT misc_feature complement(172371..172487) FT /note="Signal peptide predicted for DIP1208 by SignalP 2.0 FT HMM (Signal peptide probability 0.986) with cleavage site FT probability 0.474 between residues 39 and 40" FT misc_feature complement(172383..172448) FT /note="1 probable transmembrane helix predicted for DIP1208 FT by TMHMM2.0" FT CDS complement(172519..173397) FT /transl_table=11 FT /locus_tag="DIP1209" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus fascians hypothetical 34.0 FT kDa protein SWALL:Q9AE56 (EMBL:AJ301559) (304 aa) fasta FT scores: E(): 2.2e-46, 44.91% id in 285 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHC9" FT /protein_id="CAE49736.1" FT /translation="MRNFDLIRLTEAQWHDRESAHQLRADRLTADHMKRRRAGISHPVY FT DFLFEYYPVRVAHMKKWHPGVGVGIEGNPPHSRWKGYTTIDDVTVVDVEALKKKRSSTL FT HYVSNLLKQTQLNPTHFDCFGLHEWAMVYQTSQPRHALPLRLGAQGSNKVVESHNIRCT FT HFDAFRFFTEPAVPLNFQVLTRENQPSCEQPGCLHAMMDLYKWSAKLGPLIPGDLWLDT FT FELAWDCRVLDMEASPYDCTDYGLGIVPIETAEGKAEYVRRQRELSERGQLLRQRLVAE FT LDRIDRFTLTS" FT CDS complement(173394..174446) FT /transl_table=11 FT /locus_tag="DIP1210" FT /product="Putative membrane protein" FT /note="Similar to Rhodococcus fascians hypothetical 40.3 FT kDa protein SWALL:Q9AE57 (EMBL:AJ301559) (380 aa) fasta FT scores: E(): 5.4e-62, 50.28% id in 348 aa, to Streptomyces FT coelicolor putative integral membrane protein SC6D7.04 FT SWALL:Q9RKZ3 (EMBL:AL133213) (347 aa) fasta scores: E(): FT 8.2e-47, 40.93% id in 342 aa, and to Bacillus subtilis FT hypothetical 49.9 kDa protein in citA-sspB intergenic FT region YhdP SWALL:YHDP_BACSU (SWALL:O07585) (444 aa) fasta FT scores: E(): 5.3e-34, 34.48% id in 348 aa" FT /db_xref="InterPro:IPR002550" FT /db_xref="UniProtKB/TrEMBL:Q6NHC8" FT /protein_id="CAE49737.1" FT /translation="MSLSSTVLLIVLLLLANAYFVASEFALVSSRKDRIENLIAQGQPR FT AQKVLLSMEHLSIMLAACQFGITICSLILGKVAEPAIAHFIEQPFHSLGLPAHLLHPVS FT FIIALGIITFLHILAGEMVPKNIALAGPETLALWLIPSLLWFMRLTRPIIAVMNWLARI FT SLRAVGIEQKDELDSAVDPDQLVTMLSESRSEGYLDAEEHARLNKALRVEDRSLQEVMI FT PLNKVRSLNFGMRGPLLQELETAVAETGFSRFPVTGKDGSYLGYVHIKDVLDRFDHSSP FT DTIIHRSEIRPLIIVDAAGTMDEALQSMHSKSAHMAQVRDRGLLLGVITLEDLIEEYVG FT TFSDWTHEQS" FT misc_feature complement(173430..173588) FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature complement(173433..173573) FT /note="ProfileScan hit to PS50147, SNF4 repeat." FT misc_feature complement(173616..173786) FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature complement(173841..174437) FT /note="HMMPfam hit to PF01595, Domain of unknown function FT DUF21" FT misc_feature complement(order(174000..174065,174087..174152, FT 174213..174278,174366..174431)) FT /note="4 probable transmembrane helices predicted for FT DIP1210 by TMHMM2.0" FT misc_feature complement(174369..174446) FT /note="Signal peptide predicted for DIP1210 by SignalP 2.0 FT HMM (Signal peptide probability 0.985) with cleavage site FT probability 0.580 between residues 26 and 27" FT CDS complement(174443..175837) FT /transl_table=11 FT /locus_tag="DIP1211" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 48.1 kDa protein Rv1842c or MT1890 or MTCY1A11.02 or FT MTCY359.31 SWALL:YI42_MYCTU (SWALL:Q50592) (455 aa) fasta FT scores: E(): 8.3e-77, 49.55% id in 444 aa, and to FT Myxococcus xanthus hemolysin TlyC SWALL:AAK64446 FT (EMBL:AF377339) (463 aa) fasta scores: E(): 9.4e-38, 34.74% FT id in 449 aa" FT /db_xref="GOA:Q6NHC7" FT /db_xref="InterPro:IPR002550" FT /db_xref="UniProtKB/TrEMBL:Q6NHC7" FT /protein_id="CAE49738.1" FT /translation="MDILLSILSLLGFVLLTASTGLFVAIEFALTSLERSTIETEVKER FT GDKKSRAVQRDYQNLSFVLSGAQLGITITTLATGYLAEPVLAKFLTPLLELMGLEASTS FT VAVALVLALMIATFLSMVFGELLPKNVAITNPMGTARHVVGPVNAFNTVFKGFIKFLNH FT SANWAVRKMGIEPADELATARSTQELTAIVKSSAETGDIDENTALVLDRSLKFGETTAG FT ELMTPRSTVEVLSAEDTVLDLIALAIETGHSRFPVIRGDLDDTIGVVHFKDAFSVPEDQ FT RHVIPLSSIARPVPIIPESLDGDAVLNAVRSAGSQIILVADEYGGTSGLITIEDVVEEI FT LGEVYDEHDDADAERDFNKFGNSWEVSGLARIDEVAKTIGYVAPDGPYETLGGLVMQVL FT GRIPETNDELLLPESDNPALAEFESGYSCRWLAKVSAMEDRRVDKVIISPLQDDEVAQY FT EKEQNS" FT misc_feature complement(174815..174976) FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature complement(175001..175165) FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature complement(175220..175819) FT /note="HMMPfam hit to PF01595, Domain of unknown function FT DUF21" FT misc_feature complement(order(175457..175522,175592..175657, FT 175760..175825)) FT /note="3 probable transmembrane helices predicted for FT DIP1211 by TMHMM2.0" FT misc_feature complement(175751..175837) FT /note="Signal peptide predicted for DIP1211 by SignalP 2.0 FT HMM (Signal peptide probability 0.991) with cleavage site FT probability 0.559 between residues 29 and 30" FT CDS complement(175862..177220) FT /transl_table=11 FT /locus_tag="DIP1212" FT /product="Putative RNA helicase" FT /note="Similar to Streptomyces coelicolor SC10A5.25c FT protein SWALL:O54116 (EMBL:AL021529) (498 aa) fasta scores: FT E(): 6.5e-63, 46.93% id in 424 aa, and to Escherichia coli FT putative ATP-dependent RNA helicase RhlE or B0797 FT SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): FT 7.6e-44, 36.06% id in 452 aa" FT /db_xref="GOA:Q6NHC6" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:Q6NHC6" FT /protein_id="CAE49739.1" FT /translation="MTSFLDLGLPSGIVQVLSRLGIVDPFPIQEAAIPDAISGRDILGR FT GPTGSGKTFTFGLPMIVRLQESGVSKPSKPRGLILVPTRELAAQVRERLEEPASAMGLR FT VLEVVGGVSIKRHITSLASPVDILVATPGRAQDLINQGKLSLSEVEISTLDEADQMADM FT GFLPQVTKLLELTPKTAQRLFFSATLDGDVNKLVDRFMSDPVTHSTTAVKATVETMSHY FT RFHVGDREARNSIVEKIAGRDGKTIMFMRTKHGVDRQVKKLRRIGINAAGLHGDKGHNT FT RAAALAGFADGSVPVLVATDIAARGIDIDDVDLVVHVDPPAAHKAYVHRAGRTARAGTV FT GKVVTLVMDNQREEVDKLLGKAGVSPVIVDVHADSAELTNITGARKRNGKALQPFGAQQ FT KTSQRGKKQETTAQANQPKRGKSSSFRTRQSKNKRPIATFGGHKKKDGQKGRS" FT misc_feature complement(176207..176452) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(176213..176992) FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature complement(176555..177160) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(176597..177178) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature complement(177062..177085) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(177323..178777) FT /transl_table=11 FT /gene="gnd" FT /locus_tag="DIP1213" FT /product="6-phosphogluconate dehydrogenase, FT decarboxylating" FT /EC_number="1.1.1.44" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT 6-phosphogluconate dehydrogenase, decarboxylating MT1892 FT SWALL:AAK46163 (EMBL:AE007047) (483 aa) fasta scores: E(): FT 1e-123, 69.32% id in 476 aa, and to Escherichia coli FT 6-phosphogluconate dehydrogenase, decarboxylating Gnd or FT B2029 SWALL:6PGD_ECOLI (SWALL:P00350) (468 aa) fasta FT scores: E(): 3.1e-90, 53.2% id in 468 aa" FT /db_xref="GOA:Q6NHC5" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NHC5" FT /protein_id="CAE49740.1" FT /translation="MTDQTQLAQIGIVGLAVMGSNLARNFAHKGHTVAVFNRSFEKTQA FT LMDQHGDEGNFIPSATIEEFVASLEKPRRAIIMVQAGPATDAVINQLADAMDEGDIIID FT GGNALYTDTIRRESEIAQRGLNFVGAGISGGEEGALNGPSIMPGGPDKSWEALGPLLES FT IAAQVGGTPCVTHIGPDGAGHFVKMVHNGIEYADMQVIGEAYQLLRYATEMQPSEIADV FT FKTWNQGDLDSYLIEITSEVLAQVDSETGTPLIDLIVDEAGQKGTGRWTVKAALDLGIA FT TTGIGEAVFARALSGATTQRKAAQGNLPAGTLESLASLNIDKDQFVEDVRRALYASKLV FT AYAQGFDEIIAGSAEHNWDVDPRDLATIWRGGCIIRAKFLNRIVEAYDANPELPSLLLD FT PYFKTELESLIDSWRRVVVAATQLGLPVPVFASSLSYYDSLRAERLPAALIQGQRDFFG FT AHTYRRTDKDGSFHTLWSGDRSEVEA" FT misc_feature complement(177386..178732) FT /note="HMMPfam hit to PF00393, 6-phosphogluconate FT dehydrogenase" FT misc_feature complement(177617..177685) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(177935..178018) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(177968..178006) FT /note="ScanRegExp hit to PS00461, 6-phosphogluconate FT dehydrogenase signature." FT misc_feature complement(178178..178264) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(178331..178408) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(178478..178567) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(178685..178756) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT CDS 178886..179344 FT /transl_table=11 FT /locus_tag="DIP1214" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 15.1 kDa protein Rv1847 or MT1895 or MTCY359.26c FT SWALL:YI47_MYCTU (SWALL:P95162) (140 aa) fasta scores: E(): FT 1.6e-08, 34.67% id in 124 aa, and to Pseudomonas aeruginosa FT hypothetical protein PA1618 SWALL:YG18_PSEAE (SWALL:Q9I3A4) FT (145 aa) fasta scores: E(): 2e-05, 32.82% id in 131 aa" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q6NHC4" FT /protein_id="CAE49741.1" FT /translation="MLKSSNVEGLSIEQLEEFNEKLEGFSKTLGLRFTQINSEGVHAEL FT PVAAEHLQVSGVVNGGVYSALAETAGSIASVVAADGAMAVGVHCATDFLGMVHAGVIDV FT SAEIIHRGRTTHVVAVDMHHRGKLVARATLRTLLVAPQPEKRQKDKMA" FT misc_feature 178940..179302 FT /note="HMMPfam hit to PF02584, Uncharacterized protein FT PaaI, COG2050" FT CDS complement(179341..180441) FT /transl_table=11 FT /locus_tag="DIP1215" FT /product="Putative magnesium and cobalt transport protein" FT /note="Similar to Mycobacterium tuberculosis putative FT magnesium and cobalt transport protein CorA or Rv1239c or FT MT1277 or MTV006.11c SWALL:O50455 (EMBL:AL021006) (366 aa) FT fasta scores: E(): 1.9e-59, 43.45% id in 359 aa, and to FT Escherichia coli magnesium and cobalt transport protein FT CorA or B3816 or Z5333 or ECS4746 SWALL:CORA_ECOLI FT (SWALL:P27841) (316 aa) fasta scores: E(): 3e-05, 24.03% id FT in 312 aa" FT /db_xref="GOA:Q6NHC3" FT /db_xref="InterPro:IPR002523" FT /db_xref="UniProtKB/TrEMBL:Q6NHC3" FT /protein_id="CAE49742.1" FT /translation="MNEKNRQLPAFTPRNRRTHPISAERKQLGVDDIVDHCMIYVDGRA FT IQGWFDYGSGLKRVKDFIASGHKAFMWLSLEEPSEQHMMQVADDLHIHELIVEDAVTAH FT QRPKVERYDDQIFMVVRSVFYRDHETVDDANEIIKTGEVQMLIGEHFIITIRHRTPMPD FT LTMRLDDPQEISSYGPMIIAWAWADYLVDGYLRIVNILAEEVDELEEEVFTPGSSFNIE FT HIYMIKREILEMRHAIDPLAPALRMLVTQHKDMIAKQLRSYLRDVLDHEMVAKDYVANF FT DERLSSLIDAGVAKISLQQNSDMRAISAYVGMAAVPTLIAGIYGMNFENMPELATNYGY FT YIVILVMVLTVSLMWWYFRKMNWIGN" FT misc_feature complement(179350..180249) FT /note="HMMPfam hit to PF01544, CorA-like Mg2+ transporter FT protein" FT misc_feature complement(order(179368..179427,179458..179523)) FT /note="2 probable transmembrane helices predicted for FT DIP1215 by TMHMM2.0" FT CDS 180448..181077 FT /transl_table=11 FT /locus_tag="DIP1216" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Agrobacterium tumefaciens StrC58 FT AGR_C_2998p SWALL:AAK87404 (EMBL:AE008084) (321 aa) fasta FT scores: E(): 2.8e-06, 31.33% id in 150 aa, and to Rhizobium FT meliloti hypothetical protein RB0059 or SMB20059 FT SWALL:CAC48459 (EMBL:AL603642) (259 aa) fasta scores: E(): FT 6.5e-05, 28.67% id in 143 aa" FT /db_xref="GOA:Q6NHC2" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q6NHC2" FT /protein_id="CAE49743.1" FT /translation="MQTSFCVLVSIIERMPTWNDIKVRNPQHSHNYAKRWENLEAEGND FT INGEARLIDALVQRGSKILDAGCGQGRVGGYLSARGHIVTGIDIDDYLISEAEKKFPSA FT TWHVGDLGSESIPDQGFDIAVCAGNVITFIEPDKQEAALAHIFEALRPNGRCIIGFGAG FT RGYVFPQFFEDARNVGFVIENNFESWGLNPLTNRSQFLVAFLRKPE" FT misc_feature 180613..180930 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 180808..180933 FT /note="ProfileScan hit to PS50124, Generic FT methyl-transferase profile." FT misc_feature 181021..181035 FT /note="Putative sortase B anchoring signal. NPQTN - NPLTN" FT CDS complement(181154..182518) FT /transl_table=11 FT /gene="ndh" FT /locus_tag="DIP1217" FT /product="NADH dehydrogenase" FT /EC_number="1.6.99.3" FT /note="Similar to Corynebacterium glutamicum NADH FT dehydrogenase Ndh SWALL:Q9X710 (EMBL:AJ238250) (467 aa) FT fasta scores: E(): 2.7e-137, 78.71% id in 451 aa, and to FT Escherichia coli NADH dehydrogenase Ndh or B1109 FT SWALL:DHNA_ECOLI (SWALL:P00393) (433 aa) fasta scores: E(): FT 4.9e-20, 27.08% id in 443 aa" FT /db_xref="GOA:Q6NHC1" FT /db_xref="InterPro:IPR001327" FT /db_xref="UniProtKB/TrEMBL:Q6NHC1" FT /protein_id="CAE49744.1" FT /translation="MTNTPFRPEGGRHHVVVIGSGFGGLFAVQNLKDADVDITLIDRTN FT HHLFQPLLYQVATGILSSGEIAPQTRQVLAQQNNVHVLKAEVTDIDTESKTVVADLDDY FT SKTIEYDSLIVAAGAGQSYFGNDHFAEFAPGMKTIDDALELRARIIGAFERAEMCEDPK FT ERERLLTFVIVGAGPTGVELAGQLAEMAHRTLSGEYTQFTPSNAKIILLDGAPQVLPPF FT GKRLGRTAQRELEKIGVTVKLNAIVTGVDENSVTYKSTVDDSLHTIDSFCKIWSAGVAA FT SPLGKLVAEQLGVEVDRAGRVPVNEDLSVGDDKNVFVIGDMMSLNRLPGVAQVAIQGGE FT YVAEQIAAGVEGRSSSERPAFEYYDKGSMATVSRFNAVVKLGKVEVTGFIGWVMWLLVH FT LMFLVGFRNRATAAFSWGINALSRKRWNLATTRQQLHGRTGLQKLTALVDTAEKK" FT misc_feature complement(181301..181366) FT /note="1 probable transmembrane helix predicted for DIP1217 FT by TMHMM2.0" FT misc_feature complement(181526..182479) FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreductase" FT misc_feature complement(181550..181573) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature complement(181934..182011) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature complement(182390..182476) FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature complement(182411..182479) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT CDS 182696..183991 FT /transl_table=11 FT /locus_tag="DIP1218" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Mycobacterium tuberculosis FT putative cyclopropane fatty acid synthase UfaA1 or Rv0447c FT or MT0463 or MTV037.11C SWALL:O53732 (EMBL:AL021932) (427 FT aa) fasta scores: E(): 2.2e-13, 27.14% id in 431 aa, and to FT Agrobacterium tumefaciens StrC58 AGR_C_3601p SWALL:AAK87737 FT (EMBL:AE008115) (410 aa) fasta scores: E(): 5.1e-06, 21.91% FT id in 356 aa" FT /db_xref="GOA:Q6NHC0" FT /db_xref="InterPro:IPR003333" FT /db_xref="UniProtKB/TrEMBL:Q6NHC0" FT /protein_id="CAE49745.1" FT /translation="MNVNDQRARINADRWPNIALVPQGRRIEVKARKAESEFAAICEKA FT RIQLFGDAPDVIVREDSLFKRIAAAGWLGVAESYMAGEWYAENLVDVLKKLIAVGYHPK FT MPKLDLGGDYSGMEVDTQLIKLFSGDGMSIQGTLFSSGVPTTERIAVRSYVKGAGRANE FT PATHFVDQTTLSDPTLVEKADLGAGQLRSTTALLDSAGVHAGTHLLDFPSSGGALAINA FT CHRGATVDALTTDLDFATDIREILDLANVEGSAHVELIDDPIPAPKARPTQYDVITSVE FT KLELMQPGMKKRYVQAIDRMLAVGGAFACQSVVLNEEKADIATAAMSVHKAYVWPAFSP FT MRLSDMHKLVDRFTNLRIISQTHFPGHYQAGLRLQRETFEGNIRQAAADGFDVVYRRLW FT IYQLAMREALFIAGAVDAVQCVATTRHRRGGR" FT CDS complement(join(184010..184246,184248..184469)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1219" FT /product="Putative oxidoreductase (pseudogene)" FT /note="Pseudogene. Similar to Streptomyces coelicolor FT putative oxidoreductase SC5F1.26 SWALL:Q9F3A3 FT (EMBL:AL450165) (998 aa) fasta scores: E(): 2.5e-23, 48.05% FT id in 154 aa, and to Pseudomonas aeruginosa probable FT ferredoxin PA4772 SWALL:Q9HV36 (EMBL:AE004890) (938 aa) FT fasta scores: E(): 2.3e-14, 35.33% id in 150 aa. Presents a FT frameshift at residue 74 and lacks stop codon" FT CDS 184800..185768 FT /transl_table=11 FT /locus_tag="DIP1221" FT /product="Putative sodium-dependent transport membrane FT protein" FT /note="Similar to Salmonella typhimurium putative FT Na+-dependent transporter STM4195 SWALL:AAL23019 FT (EMBL:AE008896) (313 aa) fasta scores: E(): 8e-40, 41.43% FT id in 292 aa, and to Bacillus halodurans sodium-dependent FT transporter BH0858 SWALL:Q9KEJ4 (EMBL:AP001510) (323 aa) FT fasta scores: E(): 1.1e-38, 41.29% id in 293 aa" FT /db_xref="GOA:Q6NHB9" FT /db_xref="InterPro:IPR002657" FT /db_xref="UniProtKB/TrEMBL:Q6NHB9" FT /protein_id="CAE49747.1" FT /translation="MVDSHEKQRGDTGEVTTEDRSSAIAVLVFPVLMIVGAIIAYQTPE FT TFVGFKPYLNPMLMFIMFAMGLTITLPDLKELARRPWSIALGVVCQFIVMPLSAVAISS FT ILGFDQSLTIGLILLGSVPGGTASNVLAYLAKGDVALSVAMTSVSTLVSPFATPLIMLL FT LAGESAEVNASGMMVILLKTVLIPVGFGLILRFFAQRFVDTVLPVLPWLSIVVIGIVMM FT TVVAGAHAKLALVGIVVVLGVAIQNLIGFIAGYWSARAVRQPEASCRTASIEVATQNSG FT LAASMATQFFTPEAALPGAVATIYANISGAIYAAIVRRKAL" FT misc_feature order(184860..184928,184956..185015,185052..185120, FT 185133..185201,185214..185282,185325..185393, FT 185412..185480,185493..185561,185682..185750) FT /note="9 probable transmembrane helices predicted for FT DIP1221 by TMHMM2.0" FT misc_feature 184962..185501 FT /note="HMMPfam hit to PF01758, Sodium Bile acid symporter FT family" FT CDS complement(186168..186350) FT /transl_table=11 FT /locus_tag="DIP1222" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHB8" FT /protein_id="CAE49748.1" FT /translation="MAHRMIPALWLRIIVLIAFMAYMVQQSLPWLALIAGAFALLTGLQ FT LWVAYRSKKDDRNFS" FT misc_feature complement(order(186201..186266,186279..186329)) FT /note="2 probable transmembrane helices predicted for FT DIP1222 by TMHMM2.0" FT misc_feature complement(186240..186350) FT /note="Signal peptide predicted for DIP1222 by SignalP 2.0 FT HMM (Signal peptide probability 0.689) with cleavage site FT probability 0.401 between residues 37 and 38" FT CDS complement(186368..187066) FT /transl_table=11 FT /locus_tag="DIP1223" FT /product="Putative secreted protein" FT /note="Low similarity to Xylella fastidiosa hypothetical FT protein XF1327 SWALL:Q9PDQ2 (EMBL:AE003965) (189 aa) fasta FT scores: E(): 0.14, 25.23% id in 210 aa, and to Streptomyces FT coelicolor hypothetical 28.6 kDa protein 2SC10A7.34c FT SWALL:Q9ADM8 (EMBL:AL583945) (273 aa) fasta scores: E(): FT 0.23, 25.11% id in 215 aa" FT /db_xref="InterPro:IPR007372" FT /db_xref="UniProtKB/TrEMBL:Q6NHB7" FT /protein_id="CAE49749.1" FT /translation="MDKKQKPIIIGTFIAVAVLAIVAVAIALIPLLTNPGVKTEQVDTS FT NAQPASTDIDGEWSVTYGKAPNISSAGFTFHEVLPGDKRITSGSTRSVSGNVSVQNSHL FT TSGTVTIDMADIHTDNQKRDTNVRSKIFETAKYPEASYEISQAVDLSAVPSDGTSIELK FT IPGKLTIHGVTRDVTPDFTIIRDGNTVKVSTTIPINRLDFNVHTPEFVAAKIDENGEIN FT VLLNLEKSGS" FT misc_feature complement(186941..187066) FT /note="Signal peptide predicted for DIP1223 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.639 between residues 42 and 43" FT misc_feature complement(186980..187045) FT /note="1 probable transmembrane helix predicted for DIP1223 FT by TMHMM2.0" FT CDS complement(187080..187421) FT /transl_table=11 FT /locus_tag="DIP1224" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 13.2 kDa protein MT2109 SWALL:AAK46388 FT (EMBL:AE007062) (120 aa) fasta scores: E(): 5e-15, 43.92% FT id in 107 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHB6" FT /protein_id="CAE49750.1" FT /translation="MIWRMPTKRIPTCAWCGKELNSNGRGRPKKFCSQSCRQRAYEQRH FT GSGAKTALPEGAVVLVPEKVDNLRDALYELRCSAEDIATAADEGISVEDMKELCAELVS FT LAKKIERLR" FT CDS 187674..188063 FT /transl_table=11 FT /locus_tag="DIP1225" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 13.0 kDa protein Rv2050 or MTV018.37 SWALL:O53492 FT (EMBL:AL021899) (111 aa) fasta scores: E(): 6.5e-28, 70% id FT in 110 aa, and to Mycobacterium leprae hypothetical protein FT ML1439 SWALL:Q9CC05 (EMBL:AL583922) (111 aa) fasta scores: FT E(): 2.9e-27, 68.18% id in 110 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NHB5" FT /protein_id="CAE49751.1" FT /translation="MADRVLRGSRMGAVSYETDRDHDLAPRQMVCYKTETGEIFDVPFA FT HDAEIPSEWLCKNGQLGILMEGEGVEAKPVKPARTHWDMLRERRSLEELDVLLEERIEM FT LRKRRRNAARLLKQQQEEAAAAQNS" FT stem_loop complement(188086..188127) FT /note="Score 57: 19/19 (100%) matches, 0 gaps" FT CDS complement(188139..188942) FT /transl_table=11 FT /gene="ppm1" FT /locus_tag="DIP1226" FT /product="Putative polyprenol phosphate mannosyl FT transferase 1" FT /note="Similar to Mycobacterium smegmatis putative FT polyprenol phosphate mannosyl transferase 1 Ppm1 FT SWALL:Q9F408 (EMBL:AJ294477) (265 aa) fasta scores: E(): FT 1.6e-56, 61.6% id in 237 aa, and to Schizosaccharomyces FT pombe dolichol-phosphate mannosyltransferase Dpm1 or FT SPAC31G5.16c SWALL:O14466 (EMBL:AF007873) (236 aa) fasta FT scores: E(): 1.2e-24, 39.54% id in 220 aa" FT /db_xref="GOA:Q6NHB4" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q6NHB4" FT /protein_id="CAE49752.1" FT /translation="MPMPSEKTLVIIPTYNELENLPLITGRVRKANPNVDILIVDDNSP FT DGTGEAADALAASDSHIKVLHREGKGGLCGAYVAGFQWGLERDYTVLCEMDADGSHAPE FT QLHLLLAQVDNGADLVIGSRYVPGGKVVNWPKNRWVLSKGGNIYISLALGAGLSDMTAG FT YRAFRREVLETVDLNELSNAGYIFQVDMAWRVIQLGFDVREVPITFTEREIGESKLDGS FT FVKDSLLEVTKWGIHHRKEQITNLYTESSRLIRHEISSFRKKHLI" FT misc_feature complement(188415..188918) FT /note="HMMPfam hit to PF00535, Glycosyl transferase" FT misc_feature complement(188613..188924) FT /note="ProfileScan hit to PS50167, General FT Glycosyltransferase domain." FT CDS complement(188968..190527) FT /transl_table=11 FT /locus_tag="DIP1227" FT /product="Putative transferase/membrane protein" FT /note="Similar to Streptomyces coelicolor putative FT transferase 2SCG2.28c SWALL:Q9EX26 (EMBL:AL445963) (537 aa) FT fasta scores: E(): 2.4e-42, 37.71% id in 517 aa, and to FT Escherichia coli apolipoprotein N-acyltransferase Lnt or FT CutE or B0657 SWALL:LNT_ECOLI (SWALL:P23930) (512 aa) fasta FT scores: E(): 1.6e-19, 25.89% id in 533 aa" FT /db_xref="GOA:Q6NHB3" FT /db_xref="InterPro:IPR003010" FT /db_xref="UniProtKB/TrEMBL:Q6NHB3" FT /protein_id="CAE49753.1" FT /translation="MNRISSQAARVLLTRFAAAIVAALLVFSSYQPLGWYLCAPIGIAL FT LLWSLAPWHSECLSSRMSTLIAIVHSATLFLLLLPWIGEFVGAMPYIALSIFLSLYSIL FT WGAPLAKLLSTRKGWITAPFVLLAVEWLRSNYPFGGFAWVRLAWGQIGGPLAPLAAWGG FT PALVSFATVLVGALIFALLQRTNTRLALTISAIMSIVTASAWFNLSSSESQESTGQHQV FT TVAAVQGNVPRLGLDFNAQRRAVLANHVQETRKLTEQVDFIVWPENSSDVDPFADVRAR FT NLINSAVASVQAPIVVGTVTTDEVGARNAMVVFDPETGEGDWHVKKFLQPFGEWMPWRD FT FFRKFSSLVDLAGDFKPGEGSGVVRVHAAQLGETVKLGISTCYEVAFDQAGRDAVLAGA FT QILATPTNNATFGFTDMTYQQLAMSRMRAIELDRAVVVAATSGVSAIVTPRGEVLQHSK FT IFESATLVQSLPLKETITFSARYGTLLEKVLVIIGTLCAVSALAIRRKMPQASSRAPRK FT KN" FT misc_feature complement(order(189019..189084,189910..189960, FT 189982..190047,190093..190158,190198..190263, FT 190279..190335,190375..190428,190441..190491)) FT /note="8 probable transmembrane helices predicted for FT DIP1227 by TMHMM2.0" FT misc_feature complement(189073..189867) FT /note="HMMPfam hit to PF00795, Carbon-nitrogen hydrolase" FT misc_feature complement(189109..189465) FT /note="ProfileScan hit to PS50263, FT Nitrilase/cyanide-hydratase/amidase catalytic domain FT (active site Cys)" FT misc_feature complement(190444..190527) FT /note="Signal peptide predicted for DIP1227 by SignalP 2.0 FT HMM (Signal peptide probability 0.959) with cleavage site FT probability 0.556 between residues 28 and 29" FT CDS complement(190537..191067) FT /transl_table=11 FT /locus_tag="DIP1228" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 18.1 kDa protein Rv2053c or MTV018.40c or MTCY63A.07 FT SWALL:O53495 (EMBL:AL021899) (175 aa) fasta scores: E(): FT 0.00056, 29.07% id in 172 aa, and to Rhizobium meliloti FT hypothetical transmembrane protein R00007 or SCM02787 FT SWALL:CAC41394 (EMBL:AL591782) (191 aa) fasta scores: E(): FT 0.044, 29.06% id in 117 aa" FT /db_xref="GOA:Q6NHB2" FT /db_xref="InterPro:IPR007313" FT /db_xref="UniProtKB/TrEMBL:Q6NHB2" FT /protein_id="CAE49754.1" FT /translation="MRLYFALPYLLIEALAFWGVSRWLGTGVALILLFVCLFGGLILAA FT WEMQNISRKLSRGTASAGRAVGDLGLIGAGAMGVAMPGFVTSIAGLLLIFTPTRALVRN FT LLAKKLRTKIEELGAKSFEATNAYRQQAHYGSFAQPNTSEVIDEEEIQSWTRNLKPEDF FT GSDDSGSNDSGRK" FT misc_feature complement(order(190786..190851,190930..190995)) FT /note="2 probable transmembrane helices predicted for FT DIP1228 by TMHMM2.0" FT CDS complement(191106..194738) FT /transl_table=11 FT /gene="cobN" FT /locus_tag="DIP1229" FT /product="Putative cobalamin biosynthesis related protein" FT /note="Similar to Mycobacterium tuberculosis CobN or FT Rv2062c or MT2121 or MTCY49.01c or MTV019.03 SWALL:AAK46401 FT (EMBL:AL021922) (1195 aa) fasta scores: E(): 0, 62.22% id FT in 1215 aa, and to Methanococcus jannaschii hypothetical FT protein MJ0908 SWALL:Q58318 (EMBL:U67534) (1232 aa) fasta FT scores: E(): 5.1e-109, 36.48% id in 1258 aa" FT /db_xref="GOA:Q6NHB1" FT /db_xref="InterPro:IPR003672" FT /db_xref="UniProtKB/TrEMBL:Q6NHB1" FT /protein_id="CAE49755.1" FT /translation="MITLLSTSDTDLLSAKAATTQSEVEFQYFNPNYVNEEKLGELIAT FT TDIFVVRLLGGKRAWEAGLDTLLSTHIPVIAVSGELAVDAELTELSTAPAGVVTTAHTY FT LAEGGATNLANLHNFLSDTLLLTGLGFDQPQHMPSWGFLDSTAHQNRFESSLPKIGIIY FT YRAQHIAGNTAYITELANAIAAQGAVPVPIFSASLRQASEDLLAELSTCDALITTVLAA FT GGTKPAAAGAGAGGDDEAWDVAKLAALDIPIIQGLALTNSKSDWNDNDEGLSPLDVATQ FT IAVPEFDGRLITVPFSFKEYDEDGLIAYVPDTERCARLAGIAVRHAQLRKKENKDKKLV FT LMLSAYPTKHARIGNAVGLDTPLSTLRVLEALHSAGYNIGDPTNIPGYSTEGDHDGDAL FT MHAIIAAGGHDPEWLTQDVLDNNPLKLAKDDYLAFFATLPSAMQEEMTEHWGEAPGTHY FT VNPKTHELYIAGLQFGNIVVMVQPPRGFGENPVGIYHDPDLPANHHYLGVYFWLREKFH FT ADAIVHMGKHGNMEWLPGKNAGLSPECYPDQAIADLPLIYPFLVNDPGEGTQAKRRAHA FT TLVDHMIPPMARAETYGDITRLEQLLDEHATIAAMDPAKLPAIRQEIWTLLQAAKMDRD FT LGWDERPDEDAFDDKMMEIDGWLCEIKDAAIRGGLHILGEKVTGEIRVELVLAMLRARQ FT LWGGEEAIPGLRESLGLSEAGDENRHRVDHIENIAHGMLTRLEENNWDPTAVAEIVDNA FT ELPDDANRAGVTALLIFACNEIIPRLEQTSREIDQILRALDGRFIEAGPSGSPMRGLVN FT VLPTGRNFYSVDPKSLPSRLAWETGQLLADSLVQRYRDEHDGQYPKSVGLSVWGTSAMR FT TSGDDIAEVFALLGVRPVWDEASRRVVDLEVISLEELGRPRIDTTVRISGFFRDAFPHV FT LALIDDAVQLVSQLDEPAEQNFIRAHMMSDQHDHNLPVRRIFGSKPGTYGAGLLELIES FT GNWRDNQDLAEVYTNWGGYAYGRGVNGVKAHEEMRNAYRRIQVAAKNVDSKEHDIADSD FT DYFQFHGGMVATVRALTGSDPEAYIGDSTRQETVKTRTLHEESRRVFRARVVNPRWIEA FT MRRHGYKGAFEMSATVDYLFGYDATTGLMDDWMYETLTDTYVKDPSNREFFEKSNPWAL FT RDISERLLEAADRGLWENPTAEALDTLRNTFLEMEGNLEEGTQN" FT misc_feature complement(191349..194264) FT /note="HMMPfam hit to PF02514, CobN/Magnesium Chelatase" FT misc_feature complement(193512..193544) FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT CDS 194795..194932 FT /transl_table=11 FT /locus_tag="DIP1230" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NHB0" FT /protein_id="CAE49756.1" FT /translation="MAYVLFQNTSFKGKASRLWSDCNNGATVRVFTEFTTVIFILESVL FT " FT misc_feature 194801..194848 FT /note="ScanRegExp hit to PS00225, Crystallins beta and FT gamma 'Greek key' motif signature." FT CDS 195105..196298 FT /transl_table=11 FT /locus_tag="DIP1231" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT CobG-related protein MT2124 SWALL:AAK46404 (EMBL:AE007063) FT (363 aa) fasta scores: E(): 5.1e-43, 39.56% id in 369 aa" FT /db_xref="GOA:Q6NHA9" FT /db_xref="InterPro:IPR005117" FT /db_xref="UniProtKB/TrEMBL:Q6NHA9" FT /protein_id="CAE49758.1" FT /translation="MTTMSAMTFQKSADVKSAAVLIAHPDRSRSDMCPGALKLHHANDG FT AIGRVRFPGGRVRASQWEDIARISDELGDGSIHITTRGNMQFRGVSDEAAFADVVEAAG FT FLPSRRHDKIRNILCSPLSPELWTFTDDLDQCLQENDVVAGLSGRTLFGFDAGSGDIVS FT QNPDFGVVYVDGAYQLILGGKTTSVAIADSDEVATILTAAAEIWQNMREIEWRLHESPV FT ARQRIAEELHERFDVVRREVAVPRAQGSARPIGWISADDGTVTLGAGLRFGFLTSKVAR FT ILAAVGTDTSITPWASLVIHGLKEDEAEAVTKVLAPQGLIFDAHSPWLKVTACTGLPGC FT QKSLTNTQQDATTLVQSGDEINGLVHFSGCDRRCGHPLSHHTEYVAVGDGEYEVSER" FT misc_feature 196089..196271 FT /note="HMMPfam hit to PF01077, Nitrite and sulphite FT reductase 4Fe-4S domain" FT CDS 196295..196945 FT /transl_table=11 FT /gene="cobH" FT /locus_tag="DIP1232" FT /product="precorrin-8X methylmutase" FT /EC_number="5.4.1.2" FT /note="Similar to Pseudomonas denitrificans precorrin-8X FT methylmutase CobH SWALL:COBH_PSEDE (SWALL:P21638) (210 aa) FT fasta scores: E(): 1e-40, 59.9% id in 207 aa, and to FT Streptomyces coelicolor putative precorrin-8X methylmutase FT SCE39.32 SWALL:Q9X8F5 (EMBL:AL049573) (218 aa) fasta FT scores: E(): 8.2e-44, 62.08% id in 211 aa" FT /db_xref="GOA:Q6NHA8" FT /db_xref="InterPro:IPR003722" FT /db_xref="UniProtKB/TrEMBL:Q6NHA8" FT /protein_id="CAE49760.1" FT /translation="MSFEYITDGNEIYRQSFAMIREESDLSRFDDEQAQIAVRMIHAAG FT EVDLAEDIELSTDVVNTARDALRRGAPILTDVNMVKSGVTRKRLPADNEVICLLNEPRS FT VELARKLGTTRSAAAVELWEPHIAGAVVAIGNAPTALFHLLNWLAEDPQRPRPAAILGI FT PVGFVGAAESKAALANVAHDLGVEFVTVHGRRGGSAITCAAINALATEKEILP" FT misc_feature 196319..196933 FT /note="HMMPfam hit to PF02570, Precorrin-8X methylmutase" FT CDS 196942..198438 FT /transl_table=11 FT /gene="cobIJ" FT /locus_tag="DIP1233" FT /product="Putative bifunctional cobalamin biosynthesis FT protein" FT /EC_number="2.1.1.130" FT /note="Similar to Mycobacterium tuberculosis cobalamin FT biosynthesis protein [includes: precorrin-2 C20- FT methyltransferase; precorrin-3 methylase] CobIJ or Rv2066 FT or MT2126 or MTCY49.05 SWALL:COBI_MYCTU (SWALL:Q10677) (508 FT aa) fasta scores: E(): 3.6e-88, 50.7% id in 495 aa, FT C-terminal region to Rhodobacter capsulatus precorrin-3 FT methylase SWALL:O68097 (EMBL:AF010496) (245 aa) fasta FT scores: E(): 1.1e-34, 48.14% id in 243 aa, and N-terminal FT region to Pseudomonas aeruginosa precorrin-2 FT methyltransferase CobI or PA2904 SWALL:Q9HZU3 FT (EMBL:AE004716) (250 aa) fasta scores: E(): 1.4e-33, 43.3% FT id in 254 aa" FT /db_xref="GOA:Q6NHA7" FT /db_xref="InterPro:IPR006363" FT /db_xref="UniProtKB/TrEMBL:Q6NHA7" FT /protein_id="CAE49762.1" FT /translation="MTAVTAGKLIGVGVGPGDPELLTVKAVKAIKSADVIVFHAKPNGQ FT SAAHRIAESYIRQDQVLELLEYPVTTGVTEHPGGYAGAMAAFYASVGERLRDHLIEGKN FT VVVLALGDPMLYSSYQHIHRLLSEDFNAEIIPGIPSITSAADVLGKPLCEDDDVLTILP FT GTLPHSELVARLSDSDGAVVMKLGRTFDKVRKAMIEAGVADRAHVVVRVGMADQHSVPV FT MEADPQAIPYFSVAVVPSITDTNGDSGDKQQGEVVVVGLGPGGHRWTTPEVMAELKQAT FT DIVGYSTYVNRVPQQAGQRRHLSDNKVEAERAAMALDMAKQGRKVAVVSSGDPGVFAMA FT AAVLETADDDQWREVPVRIIPGMTAAQAVASRVGAPLGHDFGMISLSNRLKPFEIVEKR FT IRALASADMAFACYNPASKERRWQVARMKEIVSEYQAGSTPVIVARAVGSDQETVTVTT FT LEDFDPDIVDMRTMVIIGASTTKTYQGGDGVRVFTSRWYT" FT misc_feature 196963..197619 FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT misc_feature 197254..197352 FT /note="ScanRegExp hit to PS00840, Uroporphyrin-III FT C-methyltransferase signature 2." FT misc_feature 197704..198330 FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT stem_loop 198453..198505 FT /note="Score 62: 22/23 (95%) matches, 0 gaps" FT CDS complement(198520..199251) FT /transl_table=11 FT /gene="cobK" FT /locus_tag="DIP1234" FT /product="precorrin-6X reductase" FT /EC_number="1.3.1.54" FT /note="Similar to Rhodococcus erythropolis precorrin-6X FT reductase CobK SWALL:COBK_RHOER (SWALL:Q53139) (248 aa) FT fasta scores: E(): 1.6e-41, 50% id in 244 aa, and to FT Mycobacterium tuberculosis precorrin-6X reductase CobK or FT Rv2070c or MT2130 or MTCY49.09c SWALL:COBK_MYCTU FT (SWALL:Q10680) (244 aa) fasta scores: E(): 1.2e-36, 47.54% FT id in 244 aa" FT /db_xref="GOA:Q6NHA6" FT /db_xref="InterPro:IPR003723" FT /db_xref="UniProtKB/TrEMBL:Q6NHA6" FT /protein_id="CAE49763.1" FT /translation="MRALILGGTGEGRDVAAILHVAGWRVTSSLAGRVSNPKLPVGEVR FT IGGFGGPAGLTQWLLREGVEVIIDATHPFAERISASAAEASRATGIPLIALHRPEWKPR FT PRDRWIPVTSMQEAADKAARDYHHIFLTIGRQQLAPFAHDAHNLYVVRAVEPPQVALPQ FT RHRLILSRGPFTLESEKKLMIDNQIDCVVTKNSGGPLTHAKLDAARDLGIDVVMVQRPQ FT LPKVTHVATSAAEVAEIIDSL" FT misc_feature complement(198526..199251) FT /note="HMMPfam hit to PF02571, Precorrin-6x reductase FT CbiJ/CobK" FT CDS complement(199239..200012) FT /transl_table=11 FT /gene="cobM" FT /locus_tag="DIP1235" FT /product="precorrin-4 C11-methyltransferase" FT /EC_number="2.1.1.133" FT /note="Similar to Pseudomonas denitrificans precorrin-4 FT C11-methyltransferase CobM SWALL:COBM_PSEDE (SWALL:P21922) FT (253 aa) fasta scores: E(): 5.4e-46, 55.37% id in 251 aa, FT and to Rhodococcus erythropolis precorrin-4 FT C11-methyltransferase CobM SWALL:COBM_RHOER (SWALL:Q53138) FT (249 aa) fasta scores: E(): 3.4e-57, 61.04% id in 249 aa" FT /db_xref="GOA:Q6NHA5" FT /db_xref="InterPro:IPR006362" FT /db_xref="UniProtKB/TrEMBL:Q6NHA5" FT /protein_id="CAE49764.1" FT /translation="MTVYFIGAGPGAADLLTLRAHNIIKSAQVCMYAGSIVPPEVLESV FT PQNAEVINTARMPLDQIMEKIVAAHKNGHDVARLQSGDPSIYSAVAEQARRLTALGIDY FT QIVPGVPAFAAVAAALGHELTVPTVGQTVILTRVSGRASAMPQGEDLPTLGKSGATLCI FT HLAAHDIDRVVSELLPQYGEYCPAAVVAYASRPEEAIVRGTLADIAEKTRSAEITRTAI FT IVVGKVLGAEGFPDSFLYSNDRPRDEHGRTIPCAH" FT misc_feature complement(199386..200009) FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT misc_feature complement(199686..199787) FT /note="ScanRegExp hit to PS00840, Uroporphyrin-III FT C-methyltransferase signature 2." FT misc_feature complement(199953..199997) FT /note="ScanRegExp hit to PS00839, Uroporphyrin-III FT C-methyltransferase signature 1." FT CDS complement(200040..201287) FT /transl_table=11 FT /locus_tag="DIP1236" FT /product="Putative precorrin-6Y C5,15-methyltransferase" FT /note="Similar to Mycobacterium tuberculosis precorrin-6Y FT C5,15-methyltransferase [decarboxylating] CobL or Rv2072c FT or MT2132 or MTCY49.11c SWALL:COBL_MYCTU (SWALL:Q10671) FT (390 aa) fasta scores: E(): 5.8e-57, 44.22% id in 398 aa, FT and to Pseudomonas denitrificans precorrin-6Y FT C5,15-methyltransferase [decarboxylating] CobL FT SWALL:COBL_PSEDE (SWALL:P21921) (413 aa) fasta scores: E(): FT 1.5e-47, 39.5% id in 405 aa" FT /db_xref="GOA:Q6NHA4" FT /db_xref="InterPro:IPR006365" FT /db_xref="PDB:3HM2" FT /db_xref="UniProtKB/TrEMBL:Q6NHA4" FT /protein_id="CAE49765.1" FT /translation="MGRSKNDDGQAHTGSITVVGIGAGGVEELGAQARTALRQATIIIG FT SKRQLGLLPEDFQGDRIAWPSPLVPAIPALFAEFIDKEVVVLGSGDPMFHGIGSTLHRL FT LPNHSMTVIPQPSSASLACARLGWALDTTSVYSLVTHPIAHLTLAIEQGDRFLVLGRNH FT ESPHEICEHLISLGQSTAEVTVLSDIGSVSETITSGAATDYPSNDSALNVIAIRPLAAT FT RSRVPGLPDSEYVTDGQLTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQ FT TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPG FT VFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISSFAISHEHTVGSFITMKPA FT LPVHQWTVVKALTKEL" FT misc_feature complement(200208..200528) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature complement(200673..201245) FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT CDS complement(201343..202107) FT /transl_table=11 FT /locus_tag="DIP1237" FT /product="Putative oxidoreductase" FT /note="Similar to Mycobacterium tuberculosis putative FT oxidoreductase Rv2073c or MT2133 or MTCY49.12c FT SWALL:YK73_MYCTU (SWALL:Q10681) (249 aa) fasta scores: E(): FT 1.3e-38, 46.82% id in 252 aa, and to Streptomyces FT coelicolor putative short-chain dehydrogenase SC5G8.09c FT SWALL:Q9KZA5 (EMBL:AL353872) (256 aa) fasta scores: E(): FT 3.1e-27, 37.94% id in 253 aa" FT /db_xref="GOA:Q6NHA3" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NHA3" FT /protein_id="CAE49766.1" FT /translation="MEKVTETVVIVGASSEIAGRIAINLACNRDFVLLARQSERLTTRG FT GLMSVLKELGARSVEVREFNATDFTSIRPIISQIPRIDHAVVSFGILGDQNKAESDEAH FT AAEIATIDYTSQIVALTVLADIMKRQTHTSTITVFSSIAGWRPRRANYVYGSTKAGLDA FT FSQGLADSLHGSSVKMIIARPGFVIGHMTRGMKPAPMSVTPNIVAEAICSAITRSTKEK FT STSTTLWIPSKLAILATIMKLVPRRIWRKMPR" FT misc_feature complement(201406..202098) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase" FT misc_feature complement(201601..201687) FT /note="ScanRegExp hit to PS00061, Short-chain FT dehydrogenases/reductases family signature." FT CDS complement(202116..203255) FT /transl_table=11 FT /locus_tag="DIP1238" FT /product="Putative dipeptidase" FT /note="Similar to Mycobacterium tuberculosis probable FT dipeptidase Rv2089c or MT2150 or MTCY49.29c FT SWALL:YK89_MYCTU (SWALL:Q10698) (375 aa) fasta scores: E(): FT 3.1e-56, 49.86% id in 377 aa, and to Halobacterium sp FT probable peptidase PepQ1 or Vng0723g SWALL:Q9HRF6 FT (EMBL:AE005016) (369 aa) fasta scores: E(): 2.2e-37, 38.62% FT id in 378 aa" FT /db_xref="GOA:Q6NHA2" FT /db_xref="HSSP:1A16" FT /db_xref="InterPro:IPR000994" FT /db_xref="UniProtKB/TrEMBL:Q6NHA2" FT /protein_id="CAE49767.1" FT /translation="MTNTFPSRVYTKRLQQASRGAINHGLRGVVIGPGPQLEYLTGLRV FT NTHERFSALIIPAGFSSLSDAVLVVPSVDRGDVVRSAITEMGVTIQYWDDGEDAHTLAM FT NALSPLRDADVIGVDDHLEATHLISLMGLAGQGVSFVLANTVMSELFINKDPDEISQLR FT SAGEAIDRVHAEVPHLITAGRTEAEVAQDLHRLIAQEHSAIDFIIVGSGPNGANPHHDF FT SDRILNTGDIVVVDIGGTFGAGYHSDCTRTFVVGGPQHLPSDAKNLYAVLEKAQEAAVA FT HVRPGVTAESVDNVAREIITQAGYGEYFIHRTGHGIGLSTHEEPFIMKGNKLVLQPGMV FT FSIEPGIYIPGKYGARIEDIVVVTESGCERLNNQPRTLQ" FT misc_feature complement(202119..202802) FT /note="HMMPfam hit to PF00557, metallopeptidase family M24" FT CDS complement(203306..206098) FT /transl_table=11 FT /locus_tag="DIP1239" FT /product="Putative helicase" FT /note="Similar to Mycobacterium tuberculosis probable FT helicase HelY or Rv2092c or MT2153 or MTCY49.30c FT SWALL:HELY_MYCTU (SWALL:Q10701) (906 aa) fasta scores: E(): FT 4.5e-69, 48.87% id in 933 aa, and to Synechocystis sp FT antiviral protein Ski2 or SLR0451 SWALL:P74686 FT (EMBL:D90917) (1006 aa) fasta scores: E(): 2.3e-27, 29.42% FT id in 1040 aa" FT /db_xref="GOA:Q6NHA1" FT /db_xref="InterPro:IPR012961" FT /db_xref="UniProtKB/TrEMBL:Q6NHA1" FT /protein_id="CAE49768.1" FT /translation="MNATVEPESHLSYFAARQKFPLDEFQIRGCQAVESGRGVLVCAPT FT GAGKTIVGEFAVSLAISQQTKCFYTTPIKALSNQKFHDLVKAHGEDKVGLLTGDVSINR FT DADIVVMTAEVLRNMIYADSEALDRLSHVVMDEIHFLSDSSRGPVWEEAILGLDASVNV FT IGLSATVSNSEEFGRWLNTVRGDTEIIVSENRPVPLNQWMLVARRMHPLFEPGTTGEVN FT SRLVEHIERLEGTTTDGTEYGRAQLKAGGFRNRSRAMGSDNRASRRSPHRLSDKHRALS FT RPDVLHILQEQNMLPAITFIFSRAGCDAALHQCMRSSLVLTTQEESEEISDIITAGVAG FT IPEEDLRLLEYRRWRQALMRGFAAHHAGMLPAFRHVVEKLFTKGLVRAVFATETLALGI FT NMPARTVVLEKLVKFNGEGHADLTPGQYTQLTGRAGRRGIDVIGNAVVQWTPAMDPGQV FT AGLASTRTYPLVSTFAPGYNMSVNLLKTIGFEPAHRLLEKSFAQFQADGSVVDDIKAIE FT SLEESVDQLTKQLHAAFDSHDQGGAGDVDSFLEYIRIRRELTEEERKHKRLSIEQRDME FT TTRVLSKLQLGDVIAMPSKKHPLLAVVVNPANNKKDPRVWITMETGWSGRVGTDAFAMP FT PVAIGHMRLSRQTIAQPRKNSRFVVDQFRKANFQRPRRLKTSPRNRPNATISVLREQLR FT SHPAHHWRKREDLARVGEQLVREQRMLEAAQRKVNEATDTLGRTFDRIINLLAEYDYVE FT FHDGVPVITEEGENLCQIHNESDLLVAQCLKRGIWDDLDPAELSGVVSMCTFENRRETR FT GEPDAATEEMAKAMNNTVRIWEELSTDERRYRLPVTRYPEGGFALAMHQWAAGAPLGYC FT IAAAAESGAELTPGDFVRQCRQVVDLLEQVRSTAYNNDTRRAARKAIDAIRRGVVAIGN FT " FT misc_feature complement(204785..205045) FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(204785..205054) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT misc_feature complement(205493..206047) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(205505..206065) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature complement(205949..205972) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 206199..206669 FT /transl_table=11 FT /locus_tag="DIP1240" FT /product="Putative tRNA/rRNA methyltransferase" FT /note="Similar to Mycobacterium leprae putative tRNA/rRNA FT methyltransferase ML0419 SWALL:Q9CCU7 (EMBL:AL583918) (158 FT aa) fasta scores: E(): 7.7e-35, 58.71% id in 155 aa, and to FT Escherichia coli hypothetical tRNA/rRNA methyltransferase FT YibK or B3606 SWALL:YIBK_ECOLI (SWALL:P33899) (157 aa) FT fasta scores: E(): 3.3e-28, 50% id in 152 aa" FT /db_xref="GOA:Q6NHA0" FT /db_xref="InterPro:IPR016914" FT /db_xref="UniProtKB/TrEMBL:Q6NHA0" FT /protein_id="CAE49769.1" FT /translation="MSKLHIVFDNPVIPNNTGNAIRTSAVTGASLHLIEPLGFNFEDKN FT LKRAGLDYHDLADVHIHSNFDACMNALPHSRVFAFSSHATTWYTDIEYKDGDVLLFGTE FT PTGLPTEHLEHPRITQQVRIPMLPARRSMNLSNCASIAIYEAWRQLGFEGAQ" FT misc_feature 206205..206630 FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase family" FT misc_feature 206214..206645 FT /note="BlastProDom hit to PD001243, PD001243" FT stem_loop 206686..206738 FT /note="Score 52: 20/22 (90%) matches, 0 gaps" FT CDS complement(206755..207849) FT /transl_table=11 FT /gene="tatC" FT /locus_tag="DIP1241" FT /product="Sec-independent twin-arginine translocase system FT protein" FT /note="Similar to, although longer in its C-terminal region FT than Mycobacterium tuberculosis Sec-independent protein FT translocase protein TatC homolog or Rv2093c or MT2154 or FT MTCY49.33c SWALL:TATC_MYCTU (SWALL:Q10702) (308 aa) fasta FT scores: E(): 1.6e-54, 56.55% id in 290 aa, and to FT Escherichia coli Sec-independent protein translocase FT protein TatC or MttB or B3839 or Z5360 or ECS4768 FT SWALL:TATC_ECOLI (SWALL:P27857) (258 aa) fasta scores: E(): FT 9.3e-14, 28.04% id in 271 aa" FT /db_xref="InterPro:IPR019822" FT /db_xref="UniProtKB/TrEMBL:Q6NH99" FT /protein_id="CAE49770.1" FT /translation="MSNVDVQSTTKATRVRRNRIHNPFSVRPKRPTDGSMSLVEHLQEL FT RRRVIISVLALIVGTIVGFMWYQHPVNLHWFTLRSLGDILRGPYCSLPPENRAVLTLDG FT ECRLIATSPFEMFMLRLKVGALAGSVFASPVWLQQLWAFITPGLMKNERRWTLSFVTAA FT VTLFVSGAVLAYFVIAIGLQFLLTMGGEFQVTALSGGQYFNFILTLLVMFGVSFEVPLI FT IAMLNLAGILSYESIKDKRRIIIVSVFIFAAFMTPGQDPYSMVALGASLCLLVELAIQF FT TRLNDKRRKNTRPDWMDVDDEHASVLTPSSDSLEGSSPITSSAPIAPTSPISASAPESP FT SAVAPSTLERPQRLDTQSNFDDVL" FT misc_feature complement(order(206998..207063,207076..207120, FT 207157..207222,207313..207378,207415..207480, FT 207646..207702)) FT /note="6 probable transmembrane helices predicted for FT DIP1241 by TMHMM2.0" FT misc_feature complement(207040..207711) FT /note="HMMPfam hit to PF00902, MttB family UPF0032" FT misc_feature complement(207187..207246) FT /note="ScanRegExp hit to PS01218, Uncharacterized protein FT family UPF0032 signature." FT CDS complement(207922..208188) FT /transl_table=11 FT /gene="tatA" FT /locus_tag="DIP1242" FT /product="Sec-independent twin-arginine translocase system FT protein" FT /note="Similar to Mycobacterium leprae Sec-independent FT protein translocase protein TatA/E homolog or ML1331 or FT MLCB2533.27 or U2126b or B2126_C1_182 SWALL:TATA_MYCLE FT (SWALL:P54079) (88 aa) fasta scores: E(): 3.3e-07, 50.63% FT id in 79 aa, and to Escherichia coli Sec-independent FT protein translocase protein TatA or MttA1 or B3836 or Z5358 FT or ECS4766 SWALL:TATA_ECOLI (SWALL:O65938) (89 aa) fasta FT scores: E(): 0.056, 34.17% id in 79 aa" FT /db_xref="GOA:Q6NH98" FT /db_xref="InterPro:IPR006312" FT /db_xref="UniProtKB/Swiss-Prot:Q6NH98" FT /protein_id="CAE49771.1" FT /translation="MNLGPTEILLILVIVVLLFGAKKLPDAARSLGRSMRIFKSEVKEM FT SNDDQRYEEQQQQRQIAAQAQQQVVNPVEIPQPQPTDIQRPQQ" FT misc_feature complement(207925..208041) FT /note="ProfileScan hit to PS50322, Glutamine-rich region." FT misc_feature complement(208024..208182) FT /note="HMMPfam hit to PF02416, mttA/Hcf106 family" FT misc_feature complement(208126..208176) FT /note="1 probable transmembrane helix predicted for DIP1242 FT by TMHMM2.0" FT CDS complement(208223..209182) FT /transl_table=11 FT /locus_tag="DIP1243" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis ORF11 FT SWALL:P72265 (EMBL:Z82004) (326 aa) fasta scores: E(): FT 1.3e-24, 31.42% id in 315 aa, and to Mycobacterium FT tuberculosis hypothetical 33.8 kDa protein Rv2095c FT precursor or MT2156 or MTCY49.35c SWALL:YK95_MYCTU FT (SWALL:Q10704) (316 aa) fasta scores: E(): 3.4e-24, 31.57% FT id in 304 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NH97" FT /protein_id="CAE49772.1" FT /translation="MLPYFQAHPGRSMMEAAVDLGSTPSQIKEDLNRLFCCGPGTFPDE FT LVDLDAQLQSVTIFDSQGMDAPLRLTRTEAGALLLSLEYLEQFPELVHMETVKSAAKKL FT REIMGPESSAVFDSQRFEDTPASEPVIDVIRDSMAQRVQLQFDYYSRAKDTTTKRIVSA FT TRLFSADGSTYLVGWDHEAQSHRTFLTTQIRNVWLSTQPAQPHVSSLRFDDSDPFGLQT FT AEQHVEIEINESAQWLTTVFPLEDVQPAHNGWIQAIMPVVSYSWLIDTLTRNADRMRLR FT DVRSPLAISMRESAKLGLTAYASEHAEGNQFEGKESLE" FT CDS complement(209247..210224) FT /transl_table=11 FT /locus_tag="DIP1244" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis ORF10 FT SWALL:P72264 (EMBL:Z82004) (330 aa) fasta scores: E(): FT 6.6e-20, 31.42% id in 331 aa, and to Mycobacterium leprae FT hypothetical 35.4 kDa protein ML1329 or MLCB2533.25 or FT B2126_C3_266 SWALL:YK96_MYCLE (SWALL:P54076) (331 aa) fasta FT scores: E(): 2.8e-19, 30.42% id in 332 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NH96" FT /protein_id="CAE49773.1" FT /translation="MGKDVALERIVNLTFAFLRAETQGRHYISADWVIKHVDGYAKNSA FT GQIRSDAAAHQLFKRDRAALDRAGVPIETIATGAQTLYRLRTEDYSLPEVTFTPEEATV FT LALAGQMGLGDELATFSRSGWTKIAASGVQRELTSTPRYTPVNDVNSIAARDFDAILAA FT RAHRSAVTFDYYETSTSSPQQRIMDPWSIVSERDRVYLVGYDHDRQAPRCFRITKLSGI FT RRVALEADFVEPDANIDLQQLVKEQLRRGKLLVNAIIKVQPDKAQELTSRGERQPDGTL FT LLRDVDRDWLVRTLARYAPHARVLSPDDLITDVVSLLKQAAGVD" FT RBS complement(210232..210235) FT CDS complement(210249..211688) FT /transl_table=11 FT /locus_tag="DIP1245" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis ORF9 FT SWALL:P72270 (EMBL:Z82005) (447 aa) fasta scores: E(): FT 8.7e-96, 55.7% id in 456 aa, and to Mycobacterium FT tuberculosis hypothetical 51.4 kDa protein Rv2097c or FT MT2158 or MTCY49.37c SWALL:YK97_MYCTU (SWALL:Q10706) (452 FT aa) fasta scores: E(): 8.8e-96, 54.56% id in 460 aa" FT /db_xref="InterPro:IPR004989" FT /db_xref="UniProtKB/TrEMBL:Q6NH95" FT /protein_id="CAE49774.1" FT /translation="MGEYERTVFTRRITGVETEYGITCVGDNSRRRLGADEAARYMFRP FT VVEEWGSSNVFIPNGARLYLDVGSHPEYASAECDSLSQLIAYDRAGDKIVDQLAQRAET FT ALATEGIGGRVYLFKNNLDSLGNSYGCHENYLVSRDVVLKTLGRQLLPFLITRQLICGA FT GSIQDGQFQVSQRADHVWEGVSSATTRSRPIINTRDEPHADSHRFRRLHVIVGDSNMSE FT TTCALKIGSTQLVLEMIEAGALSHDLELSNEIAAIREISRDITGMAPVPLKAGTSMPAI FT EIQRRYAEKALCWLEQRGDTEGTPNAEMHKVVSLWLDTISAIESNDLQALSRDIDWAIK FT LSLLRRAQRRIGCSESDFTHPKLAQLDLAYHDIRAGRGVFPVLESKQLVNRWINDTDIE FT QATRIAPSTTRAALRGEFLTAAKKLQAPISADWLRLKVNRPEPQIIELTDPFENTDDRV FT DQLISYMRNHAASYSTDTAIS" FT misc_feature complement(210294..211280) FT /note="HMMPfam hit to PF03136," FT CDS complement(211693..211887) FT /transl_table=11 FT /locus_tag="DIP1246" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium smegmatis hypothetical 7.0 FT kDa protein PrcS SWALL:O30517 (EMBL:AF009645) (64 aa) fasta FT scores: E(): 3.2e-07, 60.71% id in 56 aa, and to FT Rhodococcus erythropolis similar to ORF7 SWALL:Q53082 FT (EMBL:U26422) (64 aa) fasta scores: E(): 1.6e-06, 55% id in FT 60 aa" FT /db_xref="InterPro:IPR008515" FT /db_xref="UniProtKB/TrEMBL:Q6NH94" FT /protein_id="CAE49775.1" FT /translation="MNQNGSQIHSDGNGHSDDTDTPGVSAGQVSVNTAGVDDLLDEIDG FT LLESNAEEFVRSYVQKGGQ" FT CDS complement(211945..213471) FT /transl_table=11 FT /locus_tag="DIP1247" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis similar to ORF6 FT SWALL:Q53081 (EMBL:U26422) (499 aa) fasta scores: E(): FT 2.2e-72, 48.04% id in 512 aa, and to Frankia spACN14A/ts-r. FT hypothetical 56.4 kDa protein SWALL:Q9RAW9 (EMBL:AF142435) FT (505 aa) fasta scores: E(): 3.8e-51, 47.36% id in 494 aa" FT /db_xref="InterPro:IPR011389" FT /db_xref="UniProtKB/TrEMBL:Q6NH93" FT /protein_id="CAE49776.1" FT /translation="MSRFVGTETEYGIATPSNTMLSPIVTSTHAVVAFSLGERCASQAR FT WDFSEESPLRDLRGFDLRRYRTVPVVDPHALGVANSVLINGGRFYVDHAHPEYSSPETS FT SAFQAMLYDAAGDVVMNRAVELVAENSQRKHSVLEHHDPCPPLKIYKNNVDGKGASYGS FT HENYLYNRETPFEEISSGLTPFFITRQVIIGAGRVGIGQYGEKSGFQISQRADYIEQEI FT SLETTLNRGIINTRDEPHADSEHFGRLHVIIGDANMSQTSNFLKIGMTTLVLDAIEAGV FT DFSDLAVANPVAEVSAISHDLTLTHKIVLRDGRTLTALELLDEYRKRVSPQSDDDLDVL FT KEWSEILVLLQKGPFYAADRLDWCAKWQLISSFIKRGVSIDDPKIQLIDLQYADIDPAK FT SLYHALVRKGRMRTLVSTEQINNAAWSPPKGSRAYLRGSLISRFPDSVVQASWDSITLQ FT TSRDQATKIKMPVVQSLSAEAIATIDTASSVKEVATILSQWLPVTTISLT" FT misc_feature complement(212023..212967) FT /note="HMMPfam hit to PF03136," FT CDS complement(213468..214997) FT /transl_table=11 FT /locus_tag="DIP1248" FT /product="Putative AAA protein family ATPase" FT /note="Similar to, although shorter in its N-terminal FT region than Streptomyces coelicolor AAA protein family FT ATPase Arc SWALL:Q9RJ58 (EMBL:AL132648) (588 aa) fasta FT scores: E(): 3e-76, 54.14% id in 519 aa, and to, although FT shorter in its N-terminal region than Mycobacterium leprae FT putative AAA-family ATPase ML1316 or MLCB2533.12 or A2126A FT or B2126_C1_167 SWALL:YL15_MYCLE (SWALL:P46509) (609 aa) FT fasta scores: E(): 2.1e-58, 54.99% id in 531 aa" FT /db_xref="GOA:Q6NH92" FT /db_xref="InterPro:IPR003960" FT /db_xref="UniProtKB/TrEMBL:Q6NH92" FT /protein_id="CAE49777.1" FT /translation="MLTSDPSESTAHLQRTISNLSARNAKLAELLKASRDKLSILQDQL FT EDLAAPPSTYGTFLEFSGGRETAEVFTAGRHMRLRISPDVEKAELVPGVQVRLGEASQV FT VEVCDISTTGQLATLVELLADNRGLICDHTGEERVVKLAAALTEGVDKLPKAGDTLLVD FT PRAGYAFEVIPKTEVSTLALEEVPDVTYADIGGLNSQIELIHDAVELPFTQPDLYRAYD FT LKPPKGVLLYGPPGCGKTLIAKAVANSLAQRIGAGNRSYFINVKGPELLNKYVGETERR FT IRLIFERARELAEEGRPVIVFFDEMESIFRTRGSGVSSDMETTVVPQLLTELDGVESLS FT NVIIIGATNREELIDPAILRPGRLDVKIRVERPDKQAARDVFARHLKQNIPTAEPIDSL FT INNAVDHLYADNPYVELSLIDGSTEILHYRDFVSGAMIANIVDRAKKCAIKDHIAGRHS FT GVASEHLIAAINAENHESEDLPNTSNPDDWSRIIGRHGLRVAHARVLGGQR" FT misc_feature complement(213648..214316) FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA)" FT misc_feature complement(213663..213701) FT /note="FPrintScan hit to PR00819, CbxX/CfqX superfamily FT signature" FT misc_feature complement(213876..214325) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(213918..213974) FT /note="ScanRegExp hit to PS00674, AAA-protein family FT signature." FT misc_feature complement(214155..214199) FT /note="FPrintScan hit to PR00819, CbxX/CfqX superfamily FT signature" FT misc_feature complement(214269..214316) FT /note="FPrintScan hit to PR00819, CbxX/CfqX superfamily FT signature" FT misc_feature complement(214278..214301) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(215094..215930) FT /transl_table=11 FT /locus_tag="DIP1249" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis hypothetical FT 35.2 kDa protein SWALL:Q9ZG14 (EMBL:AF088800) (324 aa) FT fasta scores: E(): 7.9e-71, 65.45% id in 275 aa, and to FT Mycobacterium tuberculosis hypothetical 30.1 kDa protein FT Rv2118c or MTCY261.14c SWALL:O33253 (EMBL:Z97559) (280 aa) FT fasta scores: E(): 2.6e-62, 58.27% id in 278 aa" FT /db_xref="GOA:Q6NH91" FT /db_xref="HSSP:1O54" FT /db_xref="InterPro:IPR014816" FT /db_xref="UniProtKB/TrEMBL:Q6NH91" FT /protein_id="CAE49778.1" FT /translation="MANSGPFQPGDRVQLTDPKRRHATIVLETGGAYHTHKGMIHHDDI FT IGNAEGTVVKSEQGYEYLCFRHLMVDHVLSMPRGAAVIYPKDSAQILVEGDIFPGARVL FT EAGAGSGALSMALLRAVGHEGHVFSYEIREDHLEYAENNVDEFFGYRPETWSPRLGDLQ FT DVTVEDLGGPVDRIILDMLAPWECLETASRLLIPGGVLMTYVATVPQLMKVMEGIRELK FT CFTEPRAWESLVREWRVEGLATRPEHRMNAHTAFLIWTRRLADGTVPPRPQRRARK" FT misc_feature complement(215313..215645) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT CDS complement(215937..217295) FT /transl_table=11 FT /locus_tag="DIP1250" FT /product="Putative M18-family aminopeptidase" FT /note="Similar to Streptomyces coelicolor probable FT M18-family aminopeptidase 2 ApeB or SCGD3.02 SWALL:Q9XA76 FT (EMBL:AL096822) (432 aa) fasta scores: E(): 2.9e-75, 46.31% FT id in 421 aa, and to Mycobacterium leprae probable FT M18-family aminopeptidase 2 ApeB or PepC or PepX or ML2213 FT or MLCB5.29 SWALL:Q50022 (EMBL:U15182) (443 aa) fasta FT scores: E(): 4.7e-53, 38.78% id in 428 aa" FT /db_xref="GOA:Q6NH90" FT /db_xref="InterPro:IPR001948" FT /db_xref="UniProtKB/TrEMBL:Q6NH90" FT /protein_id="CAE49779.1" FT /translation="MIMDSSFSDHRGIPIADLDHSEHVRSQTEAMAWELVSFIANSPSS FT FHAAQQGAQLLQEAGFHQVDETADWDSTLGGHFMIRGGALMAWYVPTSADTSSGFRIIG FT AHNDSPGFKLKYHPDLMSAGWQQASVEVYGGPILASWFDRELVLAGRIGLIDGSTRTVT FT TAPVLRIPHLAIHLDRDANTSLSIDRQRHTQPIFAVGEPDLSIMDVIATAAGVNKEEII FT SHDLITADAQPGEIFGATSDFLAAGRLDNLSSVFPGLKAFVEAAEDNVLGRAPMKDILV FT FAAFDHEEVGSATTTGAAGPILEDVLTRTAAGLGADAEKTKQMITRSTCISVDAAHSIH FT PNYAHQHDPLNHPVMGGGPTLKVNANQRYASNTETEAMWVRACMKAGSSHQVFVGNNSV FT PCGSTIGPITATRLGIPTVDVGVPLLSMHSARELASTTDIYWLSRCLHAYLVG" FT misc_feature complement(215946..217184) FT /note="HMMPfam hit to PF02127, Aminopeptidase I zinc FT metalloprotease (M18)" FT misc_feature complement(216000..216047) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT misc_feature complement(216264..216314) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT misc_feature complement(216387..216443) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT misc_feature complement(216837..216899) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT misc_feature complement(216948..216998) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT CDS 217397..218263 FT /transl_table=11 FT /locus_tag="DIP1251" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 30.9 kDa protein Rv2119 or MTCY261.15 SWALL:O33254 FT (EMBL:Z97559) (278 aa) fasta scores: E(): 9e-48, 48.16% id FT in 272 aa, and to Streptomyces coelicolor hypothetical 31.9 FT kDa protein SCI41.36 SWALL:Q9RJ55 (EMBL:AL132648) (284 aa) FT fasta scores: E(): 2.8e-45, 47.34% id in 264 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NH89" FT /protein_id="CAE49780.1" FT /translation="MTTSTPSASPLALSPSRANDYQQCPLLYRFRAIDKLPEPKTVAQV FT KGTLVHAVLEEMHGWPRNERLFPAAVKRLKPHWSLMCSKDTELVSLVPEEDTYDFLVEC FT RSLLRGYFEMENPQGFDALACEMYVNATLPNGVPIRGFIDRVDKAPTGEIRVVDYKTGK FT KPIPRFSQQAQFQMRFYALVYWRIYGRIPDQLRLMYLKVADSMFLTPSREELEYFERDI FT QELWEKIVTDGETGQFRPKTSKLCGWCSFQNLCPAFDGTPPAYPGWPGIADAPPCSTVD FT ASKGLTG" FT CDS 218357..218626 FT /transl_table=11 FT /locus_tag="DIP1252" FT /product="Putative virulence-associated protein" FT /note="Low similarity to Caulobacter crescentus FT virulence-associated protein, putative CC2867 SWALL:Q9A4G7 FT (EMBL:AE005951) (104 aa) fasta scores: E(): 0.00032, 29.26% FT id in 82 aa, and to Bacteroides nodosus FT virulence-associated protein I VapI SWALL:VAPI_BACNO FT (SWALL:Q46560) (108 aa) fasta scores: E(): 0.0023, 27.58% FT id in 87 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NH88" FT /protein_id="CAE49781.1" FT /translation="MSSAHAPFNPVPRHPGKVLETEYLVPQNISHYDLAKQLHITETSL FT DHFIAGETDVDYVLAFGLAHVFRESPELWIRRQQDWDTFLEQEH" FT misc_feature 218441..218506 FT /note="Predicted helix-turn-helix motif with score 1259 FT (+3.47 SD) at aa 42-63, sequence ISHYDLAKQLHITETSLDHFIA" FT CDS complement(218686..220338) FT /transl_table=11 FT /gene="fhs" FT /locus_tag="DIP1253" FT /product="formyltetrahydrofolate synthetase" FT /note="Similar to Staphylococcus aureus (strain N315) FT formyltetrahydrofolate synthetase Fhs or SA1553 or SAV1732 FT SWALL:Q99TD2 (EMBL:AP003134) (555 aa) fasta scores: E(): FT 1.2e-125, 59.34% id in 551 aa, and to Moorella FT thermoacetica formate--tetrahydrofolate ligase Fhs FT SWALL:FTHS_MOOTH (SWALL:P21164) (559 aa) fasta scores: E(): FT 4.9e-116, 55.57% id in 556 aa" FT /db_xref="GOA:Q6NH87" FT /db_xref="InterPro:IPR000559" FT /db_xref="UniProtKB/Swiss-Prot:Q6NH87" FT /protein_id="CAE49782.1" FT /translation="MPTDVEIAQAHTLEPITDIANRAGVPSDALIPYGFTKAKIDINRI FT ASENTGKLVLVTGISPTPAGEGKSTVLIGLSDAMRLRGHNSIVAIREPSLGPVMGIKGG FT AAGGGYSQIVPMEDINLHFTGDFHAITAANNTLAAMIDNHIHQGNTLGIDVRRITWQRC FT LDVNDRCLRKVVTGLGGKAHGVPTETGFTITAASEIMAILCLALDLTDLEARLARIVVG FT QTFSSEPVTVGQLNAQGALAALLRDAVNPNLVQTLGGTPALCHGGPFANIAHGCNSLIA FT TKTALSLGDVVLTEAGFGSDLGAEKFFDIKSRVGDLNVAATVVVATVRSLKYNAGVPKD FT ELTTENLEALASGVVNLERHVENIRAFGIEPIVALNKFASDTDAEINQLKAWAETMSVQ FT LIPVEVWAHGGQGALELADAVAVSMQNQTSHHLYDPELGIEASLLTIAQKIYGAADVEL FT SKQARQDLAYLQENGWDRLPVCISKTQYSFSDDPSQLGRPEGHTLHVRNLLPRIGAGFI FT VALTGDVMTMPGLPKKPAAENIGVENGEIKGLF" FT misc_feature complement(218689..220338) FT /note="HMMPfam hit to PF01268, Formate--tetrahydrofolate FT ligase" FT misc_feature complement(220009..220041) FT /note="ScanRegExp hit to PS00721, Formate--tetrahydrofolate FT ligase signature 1." FT CDS complement(220475..222049) FT /transl_table=11 FT /gene="aspA" FT /locus_tag="DIP1254" FT /product="aspartate ammonia-lyase" FT /EC_number="4.3.1.1" FT /note="Similar to Corynebacterium glutamicum aspartate FT ammonia-lyase AspA SWALL:ASPA_CORGL (SWALL:Q59200) (526 aa) FT fasta scores: E(): 1e-151, 75.66% id in 526 aa, and to FT Escherichia coli aspartate ammonia-lyase AspA or B4139 FT SWALL:ASPA_ECOLI (SWALL:P04422) (478 aa) fasta scores: E(): FT 5.2e-121, 67.16% id in 469 aa" FT /db_xref="GOA:Q6NH86" FT /db_xref="InterPro:IPR018951" FT /db_xref="UniProtKB/TrEMBL:Q6NH86" FT /protein_id="CAE49783.1" FT /translation="MASQAKNTKGSKNAEVTNDVLDGKTEGTAEKVNDAPIASDVTTKH FT ATKKAAPGFRIEEDLLGEMEVPDEVYYGVHTLRAIDNYKISSTTINDVPEFIRGMVQVK FT KATALANRRLHTLPKDKCDAIVWACDQILDHGRCMDQFPIDVFQGGAGTSVNMNTNEVI FT ANLALEHLGKPKGSYDIINPNDDVNMSQSTNDAYPTGFRLGVYEAMQELITRIDNLQFA FT FHAKGDEFTDILKMGRTQLQDAVPMTLGEEFQAFAHNLAEEQSVLRMASDRLKEVNLGA FT TAIGTGLNTPAGYRYQVVAALSECTGLEIKSARDLIEATSDTGAYVLAHAAVKRTAMKL FT SKICNDLRLLSSGPRAGLNEINLPARAAGSSIMPAKVNPVIPEVVNQVCFKVFGNDLTV FT TMAAEAGQLQLNVMEPVIGQALFESIRILGNAAVTLQHKCVEGITANADVCRAYVDNSI FT GIVTYLNPFIGHHMGDVIGKEAAETGKSVRELVLEKGLMDEETLNQILSKENLMHPSFR FT GTLYLDN" FT misc_feature complement(220523..221866) FT /note="HMMPfam hit to PF00206, Lyase" FT misc_feature complement(220895..220945) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(220916..220945) FT /note="ScanRegExp hit to PS00163, Fumarate lyases FT signature." FT misc_feature complement(221000..221083) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(221306..221356) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(221309..221371) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature complement(221426..221494) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature complement(221435..221491) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT stem_loop complement(222209..222243) FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(222324..223631) FT /transl_table=11 FT /gene="dcuA" FT /gene_synonym="genA" FT /locus_tag="DIP1255" FT /product="anaerobic C4-dicarboxylate transporter" FT /note="Similar to Escherichia coli anaerobic FT C4-dicarboxylate transporter DcuA or GenA or B4138 or Z5743 FT or ECS5119 SWALL:DCUA_ECOLI (SWALL:P04539) (433 aa) fasta FT scores: E(): 3.1e-92, 57.33% id in 436 aa, and to Vibrio FT cholerae C4-dicarboxylate transporter, anaerobic VC2699 FT SWALL:Q9KNN2 (EMBL:AE004335) (451 aa) fasta scores: E(): FT 7e-95, 63.15% id in 437 aa" FT /db_xref="GOA:Q6NH85" FT /db_xref="InterPro:IPR004668" FT /db_xref="UniProtKB/TrEMBL:Q6NH85" FT /protein_id="CAE49784.1" FT /translation="MVFVHILIVLAAIVLGARLGSIAIGFAGGIGVLLLGATGVPVTRE FT DIPFDVIGIIMAVIAAISAMQRAGGMDYLVHLAERALRKSPKHITYVAPVVTYLMTLFA FT GTGHTAFSTLPVIVEVSKESGVRPSRPLSVAVPASQMAITASPISAAVVFLASALEPLG FT VGYLSLLAIVIPATFLAIFPTAWLCNRLGKDLYDDPVYQQRLADGLVAAPGKKESYVPT FT SAAKLSVGIFLVAIVAVMVYATLISDQVGLIADPALPRNEAIMSMMLTAATITVMACKI FT PAGDILNTQVFRSGMSACVCVLGVAWLGTTLINHYIEGIKGFSGDILERSPWMLAVVLF FT AAAALLYSQAATAKALIPAALAIGVSPLTVIASFAAVSALFVLPTYPTLLAAVEMDDTG FT STRIGKAVFNHPFLIPGTVGIAISVALGFLFGGLIL" FT misc_feature complement(order(222330..222395,222489..222554, FT 222576..222632,222693..222758,222780..222845, FT 222891..222956,223074..223139,223170..223235, FT 223299..223364,223425..223490,223527..223619)) FT /note="11 probable transmembrane helices predicted for FT DIP1255 by TMHMM2.0" FT misc_feature complement(223500..223631) FT /note="Signal peptide predicted for DIP1255 by SignalP 2.0 FT HMM (Signal peptide probability 0.930) with cleavage site FT probability 0.306 between residues 44 and 45" FT CDS complement(223992..224837) FT /transl_table=11 FT /gene="hisG" FT /locus_tag="DIP1256" FT /product="ATP phosphoribosyltransferase" FT /EC_number="2.4.2.17" FT /note="Similar to Corynebacterium glutamicum ATP FT phosphoribosyltransferase HisG SWALL:HIS1_CORGL FT (SWALL:Q9Z472) (279 aa) fasta scores: E(): 2.7e-79, 75.44% FT id in 281 aa, and to Escherichia coli ATP FT phosphoribosyltransferase HisG or B2019 SWALL:HIS1_ECOLI FT (SWALL:P10366) (299 aa) fasta scores: E(): 9.4e-16, 32.3% FT id in 291 aa" FT /db_xref="GOA:P60803" FT /db_xref="InterPro:IPR015867" FT /db_xref="UniProtKB/Swiss-Prot:P60803" FT /protein_id="CAE49785.1" FT /translation="MLKIAIPNKGSLSEAAVEILAEAGYAGRGESKTLNVYDKTNDVEF FT FFLRPKDIAIYVAGGQLDLGITGRDLATDSHANVEEVMSLGFGNSSFRYAAPADQKWTV FT EMLEGKRIATSYPNLVRDDLQARGINATVIRLDGAVEISIKLGVADAIADVVSTGRTLR FT KQGLATFGEVICQSEAVIVGQQGNVVDNEQKVFLRRIEGILHAQNYLMLDYNIDRVNLA FT ASEKITPGISGPTVSPLARENWVAVRAMVPRKEANHIMDQLSELGAQAILASEIRIARL FT " FT misc_feature complement(224226..224696) FT /note="BlastProDom hit to PD003516, PD003516" FT /note="HMMPfam hit to PF01634, ATP FT phosphoribosyltransferase" FT misc_feature complement(224352..224417) FT /note="ScanRegExp hit to PS01316, ATP FT phosphoribosyltransferase signature." FT CDS complement(224919..225182) FT /transl_table=11 FT /gene="hisE" FT /locus_tag="DIP1257" FT /product="phosphoribosyl-ATP pyrophosphatase" FT /EC_number="3.6.1.31" FT /note="Similar to Corynebacterium glutamicum FT phosphoribosyl-ATP pyrophosphatase HisE SWALL:HIS2_CORGL FT (SWALL:Q9Z471) (87 aa) fasta scores: E(): 3e-23, 73.56% id FT in 87 aa, to the C-terminal region of Bacillus subtilis FT histidine biosynthesis bifunctional protein [includes: FT phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP FT pyrophosphatase] HisI or HisIE SWALL:HIS2_BACSU FT (SWALL:O34912) (209 aa) fasta scores: E(): 0.023, 32.53% id FT in 83 aa, and to the C-terminal region of Escherichia coli FT histidine biosynthesis bifunctional protein [includes: FT phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP FT pyrophosphatase] HisI or HisIE or B2026 SWALL:HIS2_ECOLI FT (SWALL:P06989) (203 aa) fasta scores: E(): 0.08, 38.88% id FT in 72 aa. Note: Although in E. coli and B. subtillis HisE FT is part of a bifunctional protein (together with HisI), it FT seems that in C. diphtheriae they are separate proteins" FT /db_xref="GOA:P60535" FT /db_xref="InterPro:IPR008179" FT /db_xref="UniProtKB/Swiss-Prot:P60535" FT /protein_id="CAE49786.1" FT /translation="MKNFDSLYHELAERAEKRPEGSGTVAALNSSLHTLGKKVIEEAGE FT VWLAAEYQSDAELAEEISQLMYWAQVIMIKRGLTPEDIYKYL" FT misc_feature complement(224922..225170) FT /note="BlastProDom hit to PD002611, PD002611" FT misc_feature complement(224922..225173) FT /note="HMMPfam hit to PF01503, Phosphoribosyl-ATP FT pyrophosphohydrolase" FT CDS complement(225201..225896) FT /transl_table=11 FT /locus_tag="DIP1258" FT /product="Putative hydrolase" FT /note="Similar to Streptomyces coelicolor putative FT hydrolase SCI46.01c SWALL:Q9EWH4 (EMBL:AL499607) (233 aa) FT fasta scores: E(): 4.7e-15, 32.8% id in 189 aa, and to FT Rhodobacter capsulatus CbbY protein SWALL:CBBY_RHOCA FT (SWALL:O33513) (227 aa) fasta scores: E(): 1.6e-11, 33.65% FT id in 205 aa" FT /db_xref="GOA:Q6NH84" FT /db_xref="InterPro:IPR005833" FT /db_xref="UniProtKB/TrEMBL:Q6NH84" FT /protein_id="CAE49787.1" FT /translation="MLRGILWDMDGTLVDSEGIWAQATFAMSTEMGRRLTAAQQRETVG FT SSFNFTVSLCASNAGIELDSEAKNYWQSFMSHYVTEKFDSSLLPNPGIKEVLDSCRNAE FT IPMAIATNTIRSIANHSIGAVGIEYFKATVCGDEVANPKPAPDVYLKGAQALGVPPEGC FT IVFEDSKSGMLGGLAAGCIVISVVDHLNNQPLPEGVVPLSRLHGSADFRGVSAEEIMQW FT YATLSPNAQ" FT misc_feature complement(225330..225872) FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT CDS complement(225940..229545) FT /transl_table=11 FT /gene="metH" FT /locus_tag="DIP1259" FT /product="5-methyltetrahydrofolate--homocysteine FT methyltransferase" FT /EC_number="2.1.1.13" FT /note="Similar to Mycobacterium tuberculosis FT 5-methyltetrahydrofolate--homocysteine methyltransferase FT MetH or Rv2124c or MTCY261.20c SWALL:METH_MYCTU FT (SWALL:O33259) (1192 aa) fasta scores: E(): 0, 70.85% id in FT 1194 aa, and to Escherichia coli FT 5-methyltetrahydrofolate--homocysteine methyltransferase FT MetH or B4019 SWALL:METH_ECOLI (SWALL:P13009) (1226 aa) FT fasta scores: E(): 2.8e-92, 32.4% id in 1225 aa" FT /db_xref="GOA:Q6NH83" FT /db_xref="HSSP:1K7Y" FT /db_xref="InterPro:IPR003759" FT /db_xref="UniProtKB/TrEMBL:Q6NH83" FT /protein_id="CAE49788.1" FT /translation="MMNTATPQFKTAFLDAMKNRVLIGDGAMGTQLQGFDLDVDSDFLG FT LEGCNEILNHTRPDVVSAIHRAYFEAGADLVETNTFGCNLPNLADYDIADRCKELAFKG FT VKI |