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EBI DbfetchID BX248354; SV 1; linear; genomic DNA; STD; PRO; 348517 BP. XX AC BX248354; XX DT 06-NOV-2003 (Rel. 77, Created) DT 23-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 XX KW complete genome. XX OS Corynebacterium diphtheriae OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Corynebacteriaceae; Corynebacterium. XX RN [1] RP 1-348517 RX DOI; 10.1093/nar/gkg874 RX PUBMED; 14602910. RA Cerdeno-Tarraga A.M., Efstratiou A., Dover L.G., Holden M.T.G., Pallen M., RA Bentley S.D., Besra G.S., Churcher C., James K.D., De Zoysa A., RA Chillingworth T., Cronin A., Dowd L., Feltwell T., Hamlin N., Holroyd S., RA Jagels K., Moule S., Quail M.A., Rabbinowitsch E., Rutherford K., RA Thomson N.R., Unwin L., Whitehead S., Barrell B.G.Parkhill.J.; RT "The complete genome sequence and analysis of Corynebacterium diphtheriae RT NCTC13129"; RL Nucleic Acids Res. 31(22):6516-6523(2003). XX RN [2] RP 1-348517 RA Cerdeno-Tarraga A.M.; RT ; RL Submitted (03-OCT-2003) to the EMBL/GenBank/DDBJ databases. RL Cerdeno-Tarraga A.M., submitted on behalf of the Pathogen Sequencing Unit, RL Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA RL E-mail: amct@sanger.ac.uk XX DR EMBL-CON; BX248353. DR RFAM; RF01066; 6C. XX FH Key Location/Qualifiers FH FT source 1..348517 FT /organism="Corynebacterium diphtheriae" FT /strain="NCTC13129" FT /mol_type="genomic DNA" FT /note="biotype gravis" FT /db_xref="taxon:1717" FT CDS 19..1677 FT /transl_table=11 FT /gene="dnaA" FT /locus_tag="DIP0001" FT /product="chromosomal replication initiator protein" FT /note="Similar to Mycobacterium tuberculosis chromosomal FT replication initiator protein DnaA or Rv0001 or MT0001 or FT MTV029.01 SW:DNAA_MYCTU (P49993) (507 aa) fasta scores: FT E(): 6.4e-73, 49.1% id in 556 aa" FT /db_xref="GOA:Q6NKL7" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:Q6NKL7" FT /protein_id="CAE48512.1" FT /translation="MWNETWNEITNELIQLSREPESEIPRITAEQRAYLKLVRPAAFVE FT GIAVLRVPHSRAKETIETHLGQAITSVLSRRMGRPFTVAVTVDPTLDVIQDLPHDVPEQ FT HIVQHHVPEHPHYSPVSQGYPPHYAPEQSEYNTEYSDEYPSGWATYHVQTPQPSQSSQS FT AQQQPAQRMPDRRRYAEQQQVPQRSEEPVMGQRRAREKPAHDPDRNGSLNPRYTFDTYV FT VSDSNKLPWSAAWAVAEKPARAYNPLFIWGDSGLGKTHLMHAIGNYAQELDPKLKVKYV FT SSEEFTNDYINSVRDDRQEAFKRRYRDLDILMVDDIQFLQGKEGTQEEFFHTFNALQQA FT DKQIVLSSDRPPKQLTTLEDRLRTRFQSGLIADIYPPDLETRIAILLNKASAEGITADR FT DVLELIASRFNASIRELEGAFIRVSAYASLNEAPINMATAQEALRDMMPEQADIEITAG FT MIMSVTAEYFHIDVDTLKGSGKSRSVAHPRQLAMYLCRELTDLSLPKIGEHFGGKDHTT FT VMYAYRKIGKEITEKRDTYDEIQQLTQQIKSSDRA" FT misc_feature 652..1593 FT /note="HMMPfam hit to PF00308, Bacterial dnaA protein" FT misc_feature 748..1134 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 751..813 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT misc_feature 772..795 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 847..891 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT misc_feature 943..987 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT misc_feature 1045..1128 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT misc_feature 1534..1593 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT /note="ScanRegExp hit to PS01008, DnaA protein signature." FT CDS 2286..3503 FT /transl_table=11 FT /gene="dnaN" FT /locus_tag="DIP0002" FT /product="DNA polymerase III, beta chain" FT /EC_number="2.7.7.7" FT /note="Similar to Mycobacterium smegmatis DNA polymerase FT III, beta chain DnaN SW:DP3B_MYCSM (P52851) (397 aa) fasta FT scores: E(): 1.3e-76, 50.51% id in 390 aa" FT /db_xref="GOA:Q6NKL6" FT /db_xref="InterPro:IPR001001" FT /db_xref="UniProtKB/TrEMBL:Q6NKL6" FT /protein_id="CAE48513.1" FT /translation="MINHIEEPSSMDAHAVSFRVEKDDLSGAVSWVARNLPTKPTQPVL FT RAVVITADDEGLEFAGFDYEVSTKVHINADVRQPGRIAVAGKLMSDIIGTLPNKTIEVF FT VEGTQVQVVCGSSRFELPLIPLDEYPPLPQLPAVTGAIDPNLFTDAVLQVAAAAGRDET FT LPMLTGIHMEIDGENVTLTATDRFRLALRRFTWSPANPEAKAKLLIPAKNLSDNARSLD FT SGSTEPVEIAVGTGENIGAEGLFGIHIDNRQTTTRMLDADFPNVSPLLPKVHNAMASVE FT ISALSDAIRRVALVAERNAQIRMQFTRDEVILSAGGSDAGHAEESVPCAFTGDQEFLIA FT FNSAYLRDGLSVIRTSRVVFGFTEPSRPAIMIPEPETLPEASADGTYPTPDTEFTYLLM FT PVRLPG" FT misc_feature 2331..2684 FT /note="HMMPfam hit to PF00712, DNA polymerase III beta FT subunit, N-terminal domain" FT misc_feature 2379..3443 FT /note="HMMSmart hit to SM00480, DNA polymerase III beta FT catalytic subunit" FT misc_feature 2706..3080 FT /note="HMMPfam hit to PF02767, DNA polymerase III beta FT subunit, central domain" FT misc_feature 3084..3395 FT /note="HMMPfam hit to PF02768, DNA polymerase III beta FT subunit, C-terminal domain" FT CDS 3542..4735 FT /transl_table=11 FT /gene="recF" FT /locus_tag="DIP0003" FT /product="DNA replication and repair protein" FT /note="Similar to Mycobacterium smegmatis DNA replication FT and repair protein RecF SW:RECF_MYCSM (P50916) (384 aa) FT fasta scores: E(): 1.1e-75, 55.38% id in 390 aa" FT /db_xref="GOA:Q6NKL5" FT /db_xref="InterPro:IPR003395" FT /db_xref="UniProtKB/Swiss-Prot:Q6NKL5" FT /protein_id="CAE48514.1" FT /translation="MYIRELSLRDFRSWPECTVTLEPGVTLFVGRNGFGKTNIVEAIGY FT VAHLGSHRVFHDSALVRQGKESARVSVTAVNHGRELTAHLLIKAKGANQAQINRTRLKS FT PRELLGVVKTVLFSPEDLSLVRGDPAERRRYLDHVIATRKPRLGGVKADYDKVLRQRNS FT LLKTAGAALRRGYGADDGALSTLDVWDSQLARLGGQLIHARHSVVRELGPLVHDAYARI FT APESRPAHIRYVSTVPFADVVELPSPEEFEAAMLAELGQCRDKEIDRGVSLVGPHRDDL FT DVVLGDYPAKGFASHGETWSMCLSLRLAEFHLLRNDGTDPVLILDDVFAELDTQRREKL FT VSVTAEAEQVLITAAVGDDLPDTLTESAVHRHFVSVADTPEGRISLLDAATGVPHDG" FT misc_feature 3548..3670 FT /note="HMMPfam hit to PF00470, RecF protein" FT misc_feature 3629..3652 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 3890..3952 FT /note="ScanRegExp hit to PS00617, RecF protein signature FT 1." FT misc_feature 4505..4561 FT /note="ScanRegExp hit to PS00618, RecF protein signature FT 2." FT CDS 4725..5276 FT /transl_table=11 FT /locus_tag="DIP0004" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium paratuberculosis FT hypothetical 17.5 kDa protein TR:Q9L7L4 (EMBL:AF222789) FT (166 aa) fasta scores: E(): 5.6e-18, 45.45% id in 143 aa" FT /db_xref="InterPro:IPR007922" FT /db_xref="UniProtKB/TrEMBL:Q6NKL4" FT /protein_id="CAE48515.1" FT /translation="MTDNDAVSAAFAHMRQEAKKRTGTVPNLNRPLPKASKSLADNDAT FT PAVPKQRGMATGPDGRRRRRSYSVQRAGSILSDEIKKRGWRKEIAGGWVNSHWDDLVGA FT QIAAHTKVEMFKDKALFITCDSTAWATNLRMMQRIILRSISEQIGPDIIVELKIFGPKA FT PSWRHGPLHVKGRGPRDTYG" FT CDS 5379..7436 FT /transl_table=11 FT /gene="gyrB" FT /locus_tag="DIP0005" FT /product="DNA gyrase subunit B" FT /EC_number="5.99.1.3" FT /note="Similar to Mycobacterium smegmatis DNA gyrase FT subunit B GyrB SW:GYRB_MYCSM (P48355) (675 aa) fasta FT scores: E(): 1.6e-127, 71.93% id in 684 aa" FT /db_xref="GOA:Q6NKL3" FT /db_xref="HSSP:1AJ6" FT /db_xref="InterPro:IPR006171" FT /db_xref="UniProtKB/TrEMBL:Q6NKL3" FT /protein_id="CAE48516.1" FT /translation="MHASVATAEHEYGASSITILEGLEAVRKRPGMYIGSTGERGLHHL FT VWEVVDNSVDEAMAGYATHVDVTLLADGGVEVVDNGRGIPVEMHPSGAPTVQVVMTQLH FT AGGKFDSDSYAVSGGLHGVGISVVNALSTRVEADIKRDGKHWLQNFSMAIPDPLVEGGN FT ARGTGTTIRFWPDAEIFETTTFKFETISRRLQEMAFLNKGLTITLVDKRVTDEELELEA FT IAEEGDTAENVSLDQIDVDADGNIDAPAAPKKREKKKVFFYPDGLKDYVAHLNKSKQVI FT HPTIISFDAKGNDHEVEVAMQWNNSYSQSVHTFANTINTFEGGTHEEGFRAALTSLMNR FT YAREHKLLKEKEANLTGDDCREGLSAVISVRVGDPQFEGQTKTKLGNTEVKGFVQRMVN FT EHIADWLDANPAEAKTIINKAVSSAHARVAARKARDLVRRKSATDLGGLPGKLADCRSK FT DPEKSELYIVEGDSAGGSAKAGRDSLYQAILPLRGKILNVEKARLDKVLKNAEVQAIIT FT ALGTGIHDEFDIKKLRYHKIVLMADADVDGSHIATLLLTLLFRFMPQLIEEGHVYLAQP FT PLYKLKWGKGEPGFAYSDAERDTLLAEGLAQNRKINKDDGIQRYKGLGEMNASELWETT FT LDPKYRVLRRVDITDAQRADEIFSILMGDDVSARRSFITRRAKDVRFLDI" FT misc_feature 5412..5444 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 5487..5915 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT /note="HMMSmart hit to SM00387, Histidine kinase-like FT ATPases" FT misc_feature 5499..5546 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 5499..7412 FT /note="HMMSmart hit to SM00433, TopoisomeraseII" FT misc_feature 5604..5645 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 5730..5774 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 5928..5975 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 5928..6602 FT /note="HMMPfam hit to PF00204, DNA topoisomerase II FT (N-terminal region)" FT misc_feature 5973..6014 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6237..6293 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6315..6356 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 6447..6497 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6591..6635 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6633..6695 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6771..6815 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 6777..6803 FT /note="ScanRegExp hit to PS00177, DNA topoisomerase II FT signature." FT misc_feature 6855..7100 FT /note="HMMPfam hit to PF01751, Toprim domain" FT misc_feature 6921..6950 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6951..7172 FT /note="BlastProDom hit to PD000616, PD000616" FT misc_feature 6969..7019 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 7023..7076 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 7083..7121 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 7200..7400 FT /note="HMMPfam hit to PF00986, DNA gyrase B subunit, FT carboxyl terminus" FT misc_feature 7203..7397 FT /note="BlastProDom hit to PD149633, PD149633" FT misc_feature 7227..7277 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 7290..7328 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 7338..7388 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT CDS complement(7503..7940) FT /transl_table=11 FT /locus_tag="DIP0006" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKL2" FT /protein_id="CAE48517.1" FT /translation="MSTLAQLLDTKRTALAAELAGFIDRSVSQSSGISGVALKGAVAAA FT KKVRPDIVTKGAERLLPEVVEVLDPYWASFEASDSTHFGEFLEQHKSEVSDKILEVADR FT NAEKVDMPALKKAYGSLRGKAASFIEPNLPGLGQIMQNYMK" FT CDS complement(8201..8473) FT /transl_table=11 FT /locus_tag="DIP0007" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKL1" FT /protein_id="CAE48518.1" FT /translation="MRGLTPEQTLMLADAFCAQTSGDLSVRDYAALNAIAAVTTAHIHA FT VVVFPTAHHMVKYVRSLVIQLSPLDDRNTDFADFLVAVLRDLNGL" FT CDS complement(8478..8681) FT /transl_table=11 FT /locus_tag="DIP0008" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 7.1 FT kDa protein SC10A5.13 TR:O54104 (EMBL:AL021529) (64 aa) FT fasta scores: E(): 0.18, 52.5% id in 40 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKL0" FT /protein_id="CAE48519.1" FT /translation="MAMTLRLTAEHDRALALLAQAQGCSKQEAATRAIIAAAARMLADE FT EVRTLARQHLPHYAATEHRLGR" FT CDS 8792..11362 FT /transl_table=11 FT /gene="gyrA" FT /locus_tag="DIP0009" FT /product="DNA gyrase subunit A" FT /EC_number="5.99.1.3" FT /note="Similar to Mycobacterium smegmatis DNA gyrase FT subunit A GyrA SW:GYRA_MYCSM (P48354) (842 aa) fasta FT scores: E(): 0, 73.35% id in 837 aa" FT /db_xref="GOA:Q6NKK9" FT /db_xref="HSSP:1AB4" FT /db_xref="InterPro:IPR013757" FT /db_xref="UniProtKB/TrEMBL:Q6NKK9" FT /protein_id="CAE48520.1" FT /translation="MSDDLLGGDGYDRVHPIDLNEEMETSYIDYAMSVIVGRALPEVRD FT GLKPVHRRILYAMYDSGYRPDRSYVKSARPVSDTMGQFHPHGDSAIYDTLVRLAQDWNM FT RYPMVDGQGNFGSRGNDGPAAMRYTECRLTPLAMEMVRDIRENTVDFSPNYDGKTQEPD FT VLPSRVPNLLMNGSNGIAVGMATNIPPHNLRELGDAIFWLLDNPEADEASALEACMKYV FT KGPDFPTAGQIVGSQGINDAYTTGRGSIRMRGVTSIEEEGNRQIIVITELPYQVNPDNM FT ISNIAEQVRDGKLAGISKIEDESSDRVGMRIVVTLKRDAVPRVVLNNLYKHSQLQTNFG FT ANMLSIVDGVPRTLRLDQMLRHYVTHQIEVIVRRTQYRLDEAEKRAHILRGLVKALDML FT DEVIALIRRSPTVDIARTGLMELLTVDEIQADAILAMQLRRLAALERQKIVDELAEIEL FT EIADYKDILARPERQRAIVRDELAEIVDKYGDDRRTQIIAATGDVTEEDLIARENVVVT FT ITSTGYAKRTKVDAYKSQRRGGKGVRGAELKQDDVVRHFFVSSTHDWILFFTNFGRVYR FT LKAYELPEASRTARGQHVANLLEFQPEERIAQVIQIQSYEDAPYLVLATAQGRVKKSRL FT SDYESNRSGGLIAINLNEGDKLIGAALCDNDDDLLLVSEEGQSIRFNANDDQLRPMGRA FT TAGVKGMRFKGDDQLLAMTVVKPDAFLLVATSGGYGKRTSLDEYSPQGRGGQGVLTFKY FT TPKRGKLIAAVVVDEDDEILAITSAGGVIRTVVNQIRPSSRATMGVRLVNLEDGVELLA FT IDRNVEGEGEEAAEAVATGAVDGPAERGKQTEVDLGIDNADEEA" FT misc_feature 8840..10213 FT /note="HMMSmart hit to SM00434, DNA Topoisomerase IV" FT misc_feature 8903..10258 FT /note="HMMPfam hit to PF00521, DNA gyrase/topoisomerase IV, FT subunit A" FT misc_feature 9671..9757 FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS 11362..11706 FT /transl_table=11 FT /locus_tag="DIP0010" FT /product="Putative membrane protein" FT /note="Similar in its C-terminal region to Mycobacterium FT leprae hypothetical 32.2 kDa protein MLB1770.07 or ML0007 FT TR:O32870 (EMBL:Z70722) (303 aa) fasta scores: E(): FT 9.9e-08, 36.28% id in 113 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKK8" FT /protein_id="CAE48521.1" FT /translation="MATRDVIITRVAPGSAFKTALSLSLIGLISWLICVVILYFGMQAV FT GIWDKINQVIGGVGGDQIVSFGLIISLAALLGTIVAIIATVLAPLTALAYNAFVDLFGG FT VEVTMREELD" FT misc_feature order(11419..11487,11557..11625) FT /note="2 probable transmembrane helices predicted for FT DIP0010 by TMHMM2.0" FT tRNA 11818..11891 FT /gene="tRNA-Ile" FT /product="transfer RNA-Ile" FT /anticodon=(pos:11852..11854,aa:Ile) FT /note="tRNA Ile anticodon GAT, Cove score 85.68" FT tRNA 11904..11976 FT /gene="tRNA-Ala" FT /product="transfer RNA-Ala" FT /anticodon=(pos:11937..11939,aa:Ala) FT /note="tRNA Ala anticodon TGC, Cove score 75.96" FT CDS complement(12176..12904) FT /transl_table=11 FT /locus_tag="DIP0011" FT /product="Putative regulatory protein" FT /note="Similar to Escherichia coli glc operon FT transcriptional activator GlcC or B2980 SW:GLCC_ECOLI FT (P52072) (254 aa) fasta scores: E(): 1.2e-05, 23.5% id in FT 234 aa" FT /db_xref="GOA:Q6NKK7" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NKK7" FT /protein_id="CAE48522.1" FT /translation="MHMSQSTQRAYQEVLDWLEKELRKGSIAIGDKLPGERALAEQFEL FT SRASVREAIRILTSMGLVRTGTGSGPHSGAIVISEPSAGLSWAIRMHLSARSLPLKDLV FT NTCILIESNAAADAATPKISPDSPERSHVLNEAHRLLDSMDDPTLPFHDYHIKDVNFHI FT LITSLAGNLVTETIMESLRYSAIAFVIERLAMRTDWAEVSEKLQREHRNILRAIEERNP FT DKARTLVHDHIADFYELTSH" FT misc_feature complement(12686..12865) FT /note="HMMSmart hit to SM00345, helix_turn_helix gluconate FT operon transcriptional repressor, DNA-binding" FT misc_feature complement(12695..12865) FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family" FT misc_feature complement(12716..12766) FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT misc_feature complement(12734..12808) FT /note="ScanRegExp hit to PS00043, Bacterial regulatory FT proteins, gntR family signature." FT misc_feature complement(12740..12805) FT /note="Predicted helix-turn-helix motif with score 1020 FT (+2.66 SD) at aa 34-55, sequence PGERALAEQFELSRASVREAIR" FT misc_feature complement(12764..12808) FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT CDS complement(12992..14662) FT /transl_table=11 FT /gene="lldP" FT /gene_synonym="lctP" FT /locus_tag="DIP0012" FT /product="L-lactate permease" FT /note="Similar to Escherichia coli L-lactate permease LldP FT or LctP or B3603 SW:LLDP_ECOLI (P33231) (551 aa) fasta FT scores: E(): 2.4e-68, 40.1% id in 561 aa" FT /db_xref="GOA:Q6NKK6" FT /db_xref="InterPro:IPR001991" FT /db_xref="UniProtKB/TrEMBL:Q6NKK6" FT /protein_id="CAE48523.1" FT /translation="MDTFTANVSAVGGSTTASAIVALLPLITFFVMLLVVKAKAYVSGL FT TALAVAIIVAIAAFHMPWNFALLSATQGAAFGLFPIVWIVVLALWFYQVTVASGRFQDM FT RAIFDTVGGGDLRIQTILIAFCFGGLLEALAGFGAPVAITATMIMALGLKPLKTATVVL FT IANTAPVAFGAVAIPITTAGTLTGLDSAHIGAVVGHQAPFFAALVPFIIVLIIDGVRGL FT RETWPAALTIGLSFAISQWWSATYFSYELTDVVASLVGLIAAVLLLQVWKPKGLDAVRE FT RLGVEKHEAAGRLTLSRTWMAVFPYVLVVAIFGVAKLWTLGIDIPKALAATDVKIPWPG FT LHGHILNSSGEAIKSTTYNFQWLSSPGTLLLITGIIVAIVYSIFDDKGRYQLPLGRAAM FT ELGLCFYRMRFSALTIVSVLSLAYVMNFSGQTLAIGTAVASLGAAFAFFSPVLGWVGTA FT VTGSDTSANALFSNLQKTAAENIGLDPHLMTAANTSGGVVGKMISPQSLAIAASSVGME FT GKESQIFRSVIWWSIGLLVVLCTMVFLQSNVLAWMLPTP" FT misc_feature complement(order(13016..13081,13301..13366,13382..13447, FT 13511..13576,13694..13759,13850..13900,13931..13987, FT 14009..14074,14120..14185,14249..14314,14375..14440, FT 14462..14527,14558..14623)) FT /note="13 probable transmembrane helices predicted for FT DIP0012 by TMHMM2.0" FT misc_feature complement(13028..14614) FT /note="HMMPfam hit to PF02652, L-lactate permease" FT misc_feature complement(13082..13144) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(13526..13585) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(13862..13939) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(13997..14059) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(14549..14662) FT /note="Signal peptide predicted for DIP0012 by SignalP 2.0 FT HMM (Signal peptide probability 0.962) with cleavage site FT probability 0.479 between residues 38 and 39" FT CDS 15159..15632 FT /transl_table=11 FT /locus_tag="DIP0013" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="GOA:Q6NKK5" FT /db_xref="InterPro:IPR002126" FT /db_xref="UniProtKB/TrEMBL:Q6NKK5" FT /protein_id="CAE48524.1" FT /translation="MGAAMGPALAVDAAQEAPTADNSPAVEAPQTPEEGEQSAQTSQDN FT PRYESQIVRAGHSAEAEQVGDVSEDTIFEYSEFDIPEGWFVSVDEDSGKVTVSTPPDAQ FT DGDNYTVKVKAVDLDGNVTWSEVTFTVGDPETDNPEIEPLDADAPEVELPAAE" FT CDS 15721..17364 FT /transl_table=11 FT /locus_tag="DIP0014" FT /product="Putative membrane protein" FT /note="Low similarity to Staphylococcus aureus subsp aureus FT N315 SA0639 protein TR:Q99VT7 (EMBL:AP003131) (543 aa) FT fasta scores: E(): 3e-23, 25.56% id in 485 aa" FT /db_xref="GOA:Q6NKK4" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NKK4" FT /protein_id="CAE48525.1" FT /translation="MIMVRLGVLCMVHGLTSTHMKVRQSKVGGRARWALILSVVLTWFS FT VIGMCMAIIGAGRIIDGGGVSRWIIAGPFVVMVSFALRGWVLAGGQVAEERRVRRQLVE FT RVFQAGEIRTSKFPTGAVVGLATESAEKMMAFRVGFMSQIVASLTSPLLVLVAMGWSSR FT WWLAAVVAAMLPIVPLVVGGFRKMVVRVSHGSQDARKALAADYMDALRALGTLQLLGAS FT ARVAQRLAARGEDNRVAVMQLLRGNQLILFAIDAVFSLAIVAVSAGLALFQVRQGVLTP FT GQGITVIALSILLLEPMDHIGAFFYVGMAGWGAQRGIHGFITSLPTGHAHVPSAQPGCI FT TMHDVSFSHGDSVVLSHAQLEIQRGQRVAIVGRSGAGKTTLLSLIAGMKTPQAGAITRG FT GDCAVVAQHTWLFQGTIADNLRLARPEATEEEMWQALSSAQLADEIRTMPAGLSTLIGE FT FGVGLSGGQAQRLSLARALISGRRIVLFDEPTAHVDLASEAKILDAINNLGRDYTVVMV FT THRDTSLAHMDRIVRVTNGRIEEEEHQHAH" FT misc_feature 15811..16614 FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT misc_feature order(15817..15885,15913..15981,16132..16200,16210..16269, FT 16465..16533,16576..16644) FT /note="6 probable transmembrane helices predicted for FT DIP0014 by TMHMM2.0" FT misc_feature 16810..17331 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 16813..17328 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 16819..16896 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 16834..16857 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 17107..17151 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 17107..17319 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 17354..19000 FT /transl_table=11 FT /locus_tag="DIP0015" FT /product="Putative transport system, ATP-binding protein" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 probable transport ATP-binding protein MsbA or FT B0914 or Z1260 or ECS0997 SWALL:MSBA_ECOLI (SWALL:P27299) FT (582 aa) fasta scores: E(): 7e-30, 26.73% id in 561 aa, and FT to Pasteurella multocida hypothetical protein PM1473 FT TR:Q9CKX8 (EMBL:AE006183) (552 aa) fasta scores: E(): FT 6.1e-33, 27.97% id in 554 aa" FT /db_xref="GOA:Q6NKK3" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NKK3" FT /protein_id="CAE48526.1" FT /translation="MRTEPTPWHLIRWLLGITRPVLRPLGASTLCRIINQILGIFLYVI FT PAYSLVAGVGSVSSVVAIMVVIALLKALLRYAEHYLGHLVAFKALELIRIRVFRDIYPQ FT APAIMRRTGPDAVGSGDMLTRLTRDIGQIEVFFAHTTAPVISAAVVPLGVVITIFMLSP FT VHGLIAAVIFGVAVVVSLDNSAYRFAIRVSEHRGNITQHITDSVGGVAEIVGYDAQQRR FT QHELRDREEPLQTAVRRRGGIVGTRLGVVAAARICVLTMLLPTTDNMALAVVCMFAVLR FT CWDMINEVADLGNHFSNSLAAARRVWSLAHAGLALNDGPQPLPTATTGATVEWDNVTFT FT YPAETTPALRNVCLTVPAGSWGAILGATGSGKSTLAALLLRYWDPTTGAIRVDGHDIRT FT CPLEQLRSTVSIVTQDITLLNTTVADNLRLAQPNATDAELIDALTVACLDRELTLDTAV FT GEQGANLSGGQRQRLSLAQALLRHGRVLILDEFTAHLNPALAANIRSRLREACPHTTII FT EITHDLTYLDSYQWVAAIDSGSLIDAAQYSR" FT misc_feature 17405..18280 FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT misc_feature order(17414..17482,17495..17563,17756..17824,17837..17896, FT 18080..18148) FT /note="5 probable transmembrane helices predicted for FT DIP0015 by TMHMM2.0" FT misc_feature 18425..18961 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 18428..18967 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 18449..18472 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 18746..18790 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 18746..18958 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT tRNA 19068..19141 FT /gene="tRNA-Ile" FT /product="transfer RNA-Ile" FT /anticodon=(pos:19102..19104,aa:Ile) FT /note="tRNA Ile anticodon GAT, Cove score 85.68" FT tRNA 19154..19226 FT /gene="tRNA-Ala" FT /product="transfer RNA-Ala" FT /anticodon=(pos:19187..19189,aa:Ala) FT /note="tRNA Ala anticodon TGC, Cove score 75.96" FT CDS <19447..19767 FT /transl_table=11 FT /locus_tag="DIP0016" FT /product="Putative membrane protein" FT /note="No database matches. Possible membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q6NKK2" FT /protein_id="CAE48527.1" FT /translation="RNHRWANGRVGADSRNDRFSVVAGVDPAVGRIPMVALVAVMMKAV FT ISTFDLQSVHPRAQLVIVDLSDADRGDSIVRALIVSTTSAVGFNLVGLGAARLGQHLRD FT LP" FT misc_feature order(19504..19572,19666..19734) FT /note="2 probable transmembrane helices predicted for FT DIP0016 by TMHMM2.0" FT CDS 19865..20029 FT /transl_table=11 FT /locus_tag="DIP0017" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKK1" FT /protein_id="CAE48528.1" FT /translation="MRGHRTRLRFAEPEGCHEAFAGHLGKNNSCRRHRDHAYRELADFG FT VKRRANAQG" FT tRNA 20221..20293 FT /gene="tRNA-Ala" FT /product="transfer RNA-Ala" FT /anticodon=(pos:20254..20256,aa:Ala) FT /note="tRNA Ala anticodon TGC, Cove score 75.96" FT CDS 20524..20721 FT /transl_table=11 FT /locus_tag="DIP0018" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKK0" FT /protein_id="CAE48529.1" FT /translation="MEFGAYGVVATEALWVARQCEQDARCSDCFVAANNRSNAGNVVIA FT YECLWDKGVRPFNVALDALV" FT CDS complement(20713..20958) FT /transl_table=11 FT /locus_tag="DIP0019" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ9" FT /protein_id="CAE48530.1" FT /translation="MIRPRRYGVASRRSLFRRLGILARSAPPSPHYSPHAFIFDEVIHG FT DYAQIVADNSMDSVTQYELWKAICSSLKDENFFELD" FT CDS complement(20955..21185) FT /transl_table=11 FT /locus_tag="DIP0020" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="GOA:Q6NKJ8" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ8" FT /protein_id="CAE48531.1" FT /translation="MNPITHSDTRAWDPTTIMWQVYPLGFAGVPVREPVDPAPRLGTAE FT DWQSLVAACDERGIAVILNSVFSHVADVMRY" FT CDS 21381..22379 FT /transl_table=11 FT /locus_tag="DIP0021" FT /product="Putative solute-binding lipoprotein" FT /note="Similar to Streptomyces coelicolor probable FT solute-binding lipoprotein SC8F11.05 TR:Q9KZH3 FT (EMBL:AL353864) (340 aa) fasta scores: E(): 2.8e-63, 54.98% FT id in 331 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ7" FT /protein_id="CAE48532.1" FT /translation="MKSIKKTLKAAAAAVAALVTVTACSATGGAPRASDNPNGQAGGVD FT TPRYTVAMITHGAPGDTFWDLVRKGAEDAARKNNIELRYSSDPEAPNQANLVQNAIDSR FT VDGIAVTLPNADAIGPVARKAADKKIPIVALNAGMDAYQKYNISAFFGQEEKVAGTLAG FT ERLAKDGARHALCVIHEQGNSSQEARCAGVKQGMGGNVETLYVNGKDLTSVQSTVQAKL FT SQDKSIDWVMGLQAPVAMTSAEAVKNAGSAAKVATFDTNAQLVDAISSGAIAWAVDQQP FT YMQGYLAVDSIWLAHRNGSTMGGGRPVYTGPSFVDSSNVDAISEAAKAGLR" FT misc_feature 21381..21476 FT /note="Signal peptide predicted for DIP0021 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.512 between residues 32 and 33" FT misc_feature 21522..22349 FT /note="HMMPfam hit to PF00532, Periplasmic binding proteins FT and sugar binding domain of the LacI family." FT CDS 22376..23407 FT /transl_table=11 FT /locus_tag="DIP0022" FT /product="Putative ABC transport protein, membrane FT component" FT /note="Similar to Streptomyces coelicolor probable ABC FT transport protein, membrane component SC8F11.06 TR:Q9KZH2 FT (EMBL:AL353864) (359 aa) fasta scores: E(): 1.1e-72, 57.66% FT id in 326 aa" FT /db_xref="GOA:Q6NKJ6" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ6" FT /protein_id="CAE48533.1" FT /translation="MSSVSADDRLRRRTGFSALIRRPELASLLGAIAIFVLFMVLAPSF FT RSLESFSTVLYASSTIGIVAVAVGMLMIGAEFDLSSGVAVTSTALAATMLNYNLHLNSW FT VGAGISLVFALGIGAWNGFLVTRTGIDSFLITLAGFLGLQGLNLAITKWVTGQVATPII FT SDMEGFGSARVVFAGTIHVGSVSIRATVLWWIFFVVIGSWLLFKTRFGNWIFAVGGDAD FT AARASGVPVDRVKIILFMFVGFAAWFVGMHNLFAFDSIQAGQGVGNEFLYIIAAVIGGC FT AMTGGRGTIIGTAIGAVIFGMTNQGIVYAGWNPDWFKFFLGAMLLFAVLTNTSFASLTK FT GRR" FT misc_feature 22376..22546 FT /note="Signal peptide predicted for DIP0022 by SignalP 2.0 FT HMM (Signal peptide probability 0.995) with cleavage site FT probability 0.810 between residues 57 and 58" FT misc_feature order(22448..22507,22526..22594,22682..22750,22769..22828, FT 22925..22993,23075..23143,23171..23224,23243..23311, FT 23321..23389) FT /note="9 probable transmembrane helices predicted for FT DIP0022 by TMHMM2.0" FT misc_feature 22526..23383 FT /note="ProfileScan hit to PS50281, Binding-system dependent FT bacterial transporters (araH, livH/limM families);" FT CDS 23408..24169 FT /transl_table=11 FT /locus_tag="DIP0023" FT /product="Putative ABC transport protein, ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor probable ABC FT transport protein, ATP-binding component SC8F11.07 FT TR:Q9KZH1 (EMBL:AL353864) (330 aa) fasta scores: E(): FT 2.8e-51, 62.15% id in 251 aa" FT /db_xref="GOA:Q6NKJ5" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ5" FT /protein_id="CAE48534.1" FT /translation="MSEIIALRDVTKSYGSFDALRGVSLSISAGEVLCVLGDNGAGKST FT LIKILSGIHKPTSGEMLIDATPTVFNGPRDALNQGIATVHQNLAVVGHMSVWRNFFLGQ FT ELTGFLGRLREDEMRRITQEQLAAMGIDLPDVDVEVESLSGGQRQVVAIARAVYFGARV FT IILDEPTAALGVKQSGMVLRFVAAAREKGIGVVLITHNPHHAYLVGDHFTILNLGNQIL FT DADRSNVTLEELTQHMAGGGELEALSHELRR" FT misc_feature 23492..24091 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 23495..24061 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 23501..23578 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 23516..23539 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 23834..23878 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 23834..24049 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS complement(24217..24825) FT /transl_table=11 FT /locus_tag="DIP0024" FT /product="Putative membrane protein" FT /note="Possible membrane protein. No database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ4" FT /protein_id="CAE48535.1" FT /translation="MNPTTIRGAVVLTKAAYNKYADYRDRKASEAYDALLSAADTAEDV FT RDSAVENVTSLAGQARKRLDAALADAQNTAESTKKDVAKTSKKLSKKARKKARKQAQKA FT GLTKKKRSAGAQAVRCSLYTVVLAALGAAAYFLWDKFSGSGVSDEPPRVEDFGADTVNT FT EESRLVYSTQTPEEGIPERDEELLNSLEEQLKNSEKNDD" FT misc_feature complement(24412..24477) FT /note="1 probable transmembrane helix predicted for DIP0024 FT by TMHMM2.0" FT misc_feature complement(24496..24591) FT /note="ProfileScan hit to PS50318, Lysine-rich region." FT CDS 24888..25430 FT /transl_table=11 FT /gene="ppiA" FT /locus_tag="DIP0025" FT /product="probable peptidyl-prolyl cis-trans isomerase A" FT /EC_number="5.2.1.8" FT /note="Similar to Mycobacterium tuberculosis probable FT peptidyl-prolyl cis-trans isomerase A PpiA or Rv0009 or FT MT0011 or MTCY10H4.08 SW:PPIA_MYCTU (P71578) (182 aa) fasta FT scores: E(): 4.7e-52, 78.36% id in 171 aa" FT /db_xref="GOA:Q6NKJ3" FT /db_xref="HSSP:1A33" FT /db_xref="InterPro:IPR000215" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ3" FT /protein_id="CAE48536.1" FT /translation="MLMMNGMTLKTATAILHTNRGDVSIELFGNHAPKTVENFVTLANG FT TAEYKTENASGTNEGPFYDGAVFHRVIDGFMIQGGDPTGTGRGGPGYMFADEFHPELQF FT DRPFLLAMANAGPGTNGSQFFITVVPTPHLNNHHTIFGEVTDAASQKVVLDIAQTATDR FT MDRPVEPVVIESVEITE" FT misc_feature 24915..25421 FT /note="ProfileScan hit to PS50072, Cyclophilin-type FT peptidyl-prolyl cis-trans isomerase profile." FT misc_feature 24948..25427 FT /note="HMMPfam hit to PF00160, Cyclophilin type FT peptidyl-prolyl cis-trans isomerase" FT misc_feature 24966..25013 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT misc_feature 25089..25127 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT misc_feature 25191..25223 FT /note="ScanRegExp hit to PS00284, Serpins signature." FT misc_feature 25209..25256 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT misc_feature 25254..25292 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT misc_feature 25293..25340 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT CDS complement(25519..>25752) FT /transl_table=11 FT /locus_tag="DIP0026" FT /product="Putative transposase (partial)" FT /note="Similar to Streptococcus mutans transposase FT (fragment) TR:Q9ZHF4 (EMBL:AF065413) (75 aa) fasta scores: FT E(): 3.5e-11, 47.22% id in 72 aa" FT /db_xref="GOA:Q6NKJ2" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ2" FT /protein_id="CAE48537.1" FT /translation="VQSMSREVNCYDNAVMENFFGHLETKMYYGEHFASVDEFYWAVDD FT YIFWYNNDRLQQRFKGLTPMQYRDQTLKALTT" FT misc_feature complement(25546..25728) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS 25877..26494 FT /transl_table=11 FT /locus_tag="DIP0027" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis putative FT transmembrane protein Rv0110 or MTV031.04 TR:O53632 FT (EMBL:AL021926) (249 aa) fasta scores: E(): 1.4e-13, 34.19% FT id in 193 aa" FT /db_xref="GOA:Q6NKJ1" FT /db_xref="InterPro:IPR002610" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ1" FT /protein_id="CAE48538.1" FT /translation="MVHTEVMNALKRAYGQAPATAVLCALTILIYLLTVVESRSIEHNL FT SDSWIADHWTLYGPYSHGLGWLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGR FT FTLAYIVSGIGASATVLLMDPLAPTVGASGAVYGLMAIFVAMSYRLRRDLTAPLILIAV FT NVGYSLLMDGVSLWGHLGGLLTGCVLGIVLVIAQTTRGNKRG" FT misc_feature order(25913..25981,26084..26152,26171..26239,26249..26317, FT 26336..26389,26402..26461) FT /note="6 probable transmembrane helices predicted for FT DIP0027 by TMHMM2.0" FT misc_feature 26054..26470 FT /note="HMMPfam hit to PF01694, Rhomboid family" FT CDS complement(26672..27025) FT /transl_table=11 FT /locus_tag="DIP0028" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKJ0" FT /protein_id="CAE48539.1" FT /translation="MEEIVELHGWKLSPDFIHTLWIKLCTSSPPADLFEILWENSRSHT FT SNTQLFDHHSVNNTHVIIHIVDNCCGIFFTRSALCSQTKSCEILVDNYKNLGITQNSCA FT LYPTKNWGVGPPQ" FT CDS 27567..29366 FT /transl_table=11 FT /gene="thiC" FT /locus_tag="DIP0029" FT /product="thiamine biosynthesis protein" FT /note="Similar to Escherichia coli thiamine biosynthesis FT protein ThiC or B3994 SW:THIC_ECOLI (P30136) (631 aa) fasta FT scores: E(): 1.6e-132, 64.01% id in 603 aa" FT /db_xref="GOA:P61424" FT /db_xref="InterPro:IPR002817" FT /db_xref="UniProtKB/Swiss-Prot:P61424" FT /protein_id="CAE48540.1" FT /translation="MSAASANSVTNPSAWENSEIHPKHSYSPIVSGDLEVPETEIQLDD FT SPTGPNDPVRIYRTRGPECDPTVGLKPLRAQWIDSREDTEEYAGRERNLADDGRSAQRR FT GAASLEWKGVKPTPRRAKQGKRVTQMHYARQGIITKEMEFVALREHMDPEFVRSEIARG FT RAIIPNNINHPESEPMIIGRKFLTKINANIGNSAVTSSIEEEVSKLRWATRWGADTVMD FT LSTGDDIHTTREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTVIEQCEQGVD FT YMTIHAGVLLAYIPLTTKRITGIVSRGGSIMAGWCLAHHKESFLYEHFDELCEIFAQYD FT VAFSLGDGLRPGSVADANDAAQFAELKTIGELARRAWEYDVQVMIEGPGHVPLNMVQEN FT NELEQKWAHDAPFYTLGPLVTDIAPGYDHITSAIGAAHIAMGGTAMLCYVTPKEHLGLP FT NRDDVKTGVITYKLAAHAADVAKGHPGARAWDDAMSKARFEFRWHDQFALSLDPDTAIA FT YHDETLPAEPAKTAHFCSMCGPKFCSMRISQDIRDMFADKIADLGIPQVGGDAEAGMAA FT KSEEFVAQGSQLYSEVRDNAAHA" FT misc_feature 27945..29219 FT /note="BlastProDom hit to PD007048, PD007048" FT misc_feature 27948..29219 FT /note="HMMPfam hit to PF01964, ThiC family" FT CDS 29350..30018 FT /transl_table=11 FT /gene="thiE" FT /locus_tag="DIP0030" FT /product="Putative thiamin-phosphate pyrophosphorylase" FT /note="Similar to Campylobacter jejuni thiamin-phosphate FT pyrophosphorylase ThiE or CJ1081 TR:Q9PNL3 (EMBL:AL139077) FT (210 aa) fasta scores: E(): 3.8e-14, 34.67% id in 199 aa" FT /db_xref="GOA:Q6NKI9" FT /db_xref="InterPro:IPR003733" FT /db_xref="UniProtKB/TrEMBL:Q6NKI9" FT /protein_id="CAE48541.1" FT /translation="MLPTPRWGRDFDPRCYFVTGTGSVDHIVDVARQAARAGAGLIQVR FT SKPIAARDLYILGREVARAVAEVNPRTRVLIDDRVDVALALMNNGEHIHGVHVGQDDLP FT VRHVRALLGDNAIIGLTTGTLELVRASRQVAEVIDYIGAGPFRPTPTKDSGRAPVGLAG FT YPPLVAESLVPVVAIGDVRPEDAADLAATGVAGVAIVRALMNSQGVATDVKLVLKGFAQ FT " FT misc_feature 29383..30012 FT /note="HMMPfam hit to PF02581, Thiamine monophosphate FT synthase/TENI" FT CDS 30015..31103 FT /transl_table=11 FT /gene="thiO" FT /locus_tag="DIP0031" FT /product="Putative thiamine biosynthesis oxidoreductase" FT /note="Similar to Rhizobium etli putative thiamine FT biosynthesis oxidoreductase ThiO SW:THIO_RHIET (O34292) FT (327 aa) fasta scores: E(): 5.4e-09, 31.67% id in 341 aa" FT /db_xref="GOA:Q6NKI8" FT /db_xref="InterPro:IPR012727" FT /db_xref="UniProtKB/TrEMBL:Q6NKI8" FT /protein_id="CAE48542.1" FT /translation="MKIAVVGGGIVGLSTAFELSSRGHSVHVFDPNPASGASHFAGGML FT APAAEVQFQQDPLFPLMKRAGKLWPDMVRRVAQRTNLPTGYRTEGTLVVAADRADAEHL FT KQLRATQEAAGMDVRPITTRQARGLEPALGPRLSAAVHIPNDTQVAPRVFLTALLDALD FT DCGVGVIKEKITDLEPLYQQFDVVVLAAGLGAQHLSPIPLALRPVRGDILRVQTEPGAV FT NMVVRGWVNDRPIYIIPRANGEIAIGATSREDERDLPSVEGIYDLLRDAIRVVPGIVDS FT SLIEANVGVRPGTPDDLPYLGWASDRLIISTGYFRHGILLSALGAHVTACLIDGTDPGI FT DLTACAPDRHHNERGTTHGHLH" FT misc_feature 30015..31022 FT /note="HMMPfam hit to PF01266, FAD dependent FT oxidoreductase" FT misc_feature 30021..30107 FT /note="ProfileScan hit to PS50205, NAD binding site." FT CDS 31087..31287 FT /transl_table=11 FT /locus_tag="DIP0032" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 6.6 FT kDa protein SC6E10.02 TR:Q9S2N5 (EMBL:AL109661) (66 aa) FT fasta scores: E(): 1.1e-06, 36.36% id in 66 aa" FT /db_xref="GOA:Q6NKI7" FT /db_xref="InterPro:IPR010035" FT /db_xref="UniProtKB/TrEMBL:Q6NKI7" FT /protein_id="CAE48543.1" FT /translation="MDIYINDIPTAIESPQLTDIISNHCNGIRRGIAVAINQRVIPRSQ FT WDTTTVTAGDHLDILTAVQGG" FT CDS 31289..32074 FT /transl_table=11 FT /gene="thiG" FT /locus_tag="DIP0033" FT /product="thiazole biosynthesis protein" FT /note="Similar to Escherichia coli thiazole biosynthesis FT protein ThiG or B3991 SW:THIG_ECOLI (P30139) (256 aa) fasta FT scores: E(): 1.5e-36, 45.85% id in 253 aa, and to FT Streptomyces coelicolor thiazole biosynthesis protein ThiG FT or SC6E10.03 SW:THIG_STRCO (Q9S2N4) (264 aa) fasta scores: FT E(): 9.9e-58, 65.21% id in 253 aa" FT /db_xref="GOA:Q6NKI6" FT /db_xref="InterPro:IPR008867" FT /db_xref="UniProtKB/Swiss-Prot:Q6NKI6" FT /protein_id="CAE48545.1" FT /translation="MLTIADRSFQSHLIMGTGGASSFDTLEKSLIASGTELTTVAMRRH FT AAHTGAHGESVFELMQRLNITPLPNTAGCRTARDAILTAQLAREALDTSWIKVEVIADD FT TTLLPDVLELIDATETLTNDGFTVLAYTSDDPVVAQRLEDAGAAAVMPLGSPIGTGLGI FT LNPHNIELICSRATVPVLLDAGIGTASDATLAMELGCSGVLLASAINRCINPITMATAM FT KHAVEAGRLAREAGRIPRREHAVASSSFEGLASWADEVL" FT misc_feature 31814..31921 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 32071..33084 FT /transl_table=11 FT /locus_tag="DIP0034" FT /product="Putative adenylyltransferase" FT /note="Similar to Escherichia coli adenylyltransferase ThiF FT or B3992 SW:THIF_ECOLI (P30138) (251 aa) fasta scores: E(): FT 1.1e-21, 35.86% id in 237 aa" FT /db_xref="GOA:Q6NKI5" FT /db_xref="HSSP:1JW9" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NKI5" FT /protein_id="CAE48547.1" FT /translation="MMLDELERQRVARQLRLPGFGIEQQERLNNGRVLVIGAGGLGSPA FT LQSLAAAGVGSIRLVDNDTVDVSNIQRQILFGVGDVGRSKVHVAAERLRAIQPGIRIDA FT RTERLTAHNAHELAEGCDVILDGSDTFATKFLCGDLAEITGIPLVWGSVLQFEGHMGVF FT TREVGLRDLFPEAPTQGLNCADAGVLGATTAVIANLMATETIKILAGIGTVQPGAVTTY FT NALTSTFRTYTVGRDPLRSAARTLYTWTLPNEYELIDVREPHEIEHTPSGAHITLPQSM FT WNDTTAIQHALDNITTDNVVVVCASGIRSAAFIEQFAHLNPHLTFHNVPSGINELP" FT misc_feature 32137..32565 FT /note="ProfileScan hit to PS50204, UBA/THIF-type NAD FT binding fold." FT misc_feature 32155..32565 FT /note="HMMPfam hit to PF00899, ThiF family" FT misc_feature 32164..32232 FT /note="FPrintScan hit to PR00420, Aromatic-ring hydroxylase FT (flavoprotein monooxygenase) signature" FT misc_feature 32167..32256 FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature 32755..32802 FT /note="FPrintScan hit to PR00420, Aromatic-ring hydroxylase FT (flavoprotein monooxygenase) signature" FT CDS 33081..33899 FT /transl_table=11 FT /gene="thiD" FT /locus_tag="DIP0035" FT /product="phosphomethylpyrimidine kinase" FT /EC_number="2.7.4.7" FT /note="Similar to Escherichia coli phosphomethylpyrimidine FT kinase ThiD or B2103 SW:THID_ECOLI (P76422) (266 aa) fasta FT scores: E(): 5.5e-30, 44.9% id in 265 aa" FT /db_xref="GOA:Q6NKI4" FT /db_xref="HSSP:1JXH" FT /db_xref="InterPro:IPR004399" FT /db_xref="UniProtKB/TrEMBL:Q6NKI4" FT /protein_id="CAE48548.1" FT /translation="MTPHILTIAGSDPSGGAGIQADLKSIMAAGGYGMAAITALTAQNT FT CGVTAIHTPPTEFLSEQLRAISDDITIHAIKIGMIGSSDAATAIATWLDQLHHTSIVVL FT DPVMVATSGSVLGQRHYFEPLLHHATVITPNLPELAVLANNHGPEQAEHAARSLAEQYD FT CAVLLKGGHRHGTDDLGNTWITASGPQFHAPSPRIHTTDTHGTGCSLSSALATRLAIEP FT PEPALHWATTWLNGAIAHGSDLNVGHGNGPVDHSYQLREYSANCNTINAP" FT repeat_region complement(33865..34120) FT /note="repX" FT CDS 34478..37732 FT /transl_table=11 FT /locus_tag="DIP0036" FT /product="Conserved hypothetical protein" FT /note="Similar in its N-terminal region to Pasteurella FT multocida hypothetical protein PM1127 TR:Q9CLT2 FT (EMBL:AE006153) (1056 aa) fasta scores: E(): 1.4e-15, FT 21.94% id in 802 aa" FT /db_xref="GOA:Q6NKI3" FT /db_xref="InterPro:IPR003615" FT /db_xref="UniProtKB/TrEMBL:Q6NKI3" FT /protein_id="CAE48549.1" FT /translation="MKYHVGIDVGTFSVGLAAIEVDDAGMPIKTLSLVSHIHDSGLDPD FT EIKSAVTRLASSGIARRTRRLYRRKRRRLQQLDKFIQRQGWPVIELEDYSDPLYPWKVR FT AELAASYIADEKERGEKLSVALRHIARHRGWRNPYAKVSSLYLPDGPSDAFKAIREEIK FT RASGQPVPETATVGQMVTLCELGTLKLRGEGGVLSARLQQSDYAREIQEICRMQEIGQE FT LYRKIIDVVFAAESPKGSASSRVGKDPLQPGKNRALKASDAFQRYRIAALIGNLRVRVD FT GEKRILSVEEKNLVFDHLVNLTPKKEPEWVTIAEILGIDRGQLIGTATMTDDGERAGAR FT PPTHDTNRSIVNSRIAPLVDWWKTASALEQHAMVKALSNAEVDDFDSPEGAKVQAFFAD FT LDDDVHAKLDSLHLPVGRAAYSEDTLVRLTRRMLSDGVDLYTARLQEFGIEPSWTPPTP FT RIGEPVGNPAVDRVLKTVSRWLESATKTWGAPERVIIEHVREGFVTEKRAREMDGDMRR FT RAARNAKLFQEMQEKLNVQGKPSRADLWRYQSVQRQNCQCAYCGSPITFSNSEMDHIVP FT RAGQGSTNTRENLVAVCHRCNQSKGNTPFAIWAKNTSIEGVSVKEAVERTRHWVTDTGM FT RSTDFKKFTKAVVERFQRATMDEEIDARSMESVAWMANELRSRVAQHFASHGTTVRVYR FT GSLTAEARRASGISGKLKFFDGVGKSRLDRRHHAIDAAVIAFTSDYVAETLAVRSNLKQ FT SQAHRQEAPQWREFTGKDAEHRAAWRVWCQKMEKLSALLTEDLRDDRVVVMSNVRLRLG FT NGSAHKETIGKLSKVKLSSQLSVSDIDKASSEALWCALTREPGFDPKEGLPANPERHIR FT VNGTHVYAGDNIGLFPVSAGSIALRGGYAELGSSFHHARVYKITSGKKPAFAMLRVYTI FT DLLPYRNQDLFSVELKPQTMSMRQAEKKLRDALATGNAEYLGWLVVDDELVVDTSKIAT FT DQVKAVEAELGTIRRWRVDGFFSPSKLRLRPLQMSKEGIKKESAPELSKIIDRPGWLPA FT VNKLFSDGNVTVVRRDSLGRVRLESTAHLPVTWKVQ" FT misc_feature 36107..36271 FT /note="HMMSmart hit to SM00507, HNH nucleases" FT misc_feature 36140..36289 FT /note="HMMPfam hit to PF01844, HNH endonuclease" FT misc_feature 36464..36529 FT /note="Predicted helix-turn-helix motif with score 1063 FT (+2.81 SD) at aa 663-684, sequence RSMESVAWMANELRSRVAQHFA" FT CDS 37736..38650 FT /transl_table=11 FT /locus_tag="DIP0037" FT /product="Conserved hypothetical protein" FT /note="Similar to Neisseria meningitidis hypothetical FT protein NMA0630 TR:Q9JVY0 (EMBL:AL162753) (304 aa) fasta FT scores: E(): 2.7e-22, 37.5% id in 256 aa, and to FT Pasteurella multocida hypothetical protein PM1126 TR:Q9CLT3 FT (EMBL:AE006153) (343 aa) fasta scores: E(): 3.5e-22, 32.04% FT id in 284 aa" FT /db_xref="InterPro:IPR019855" FT /db_xref="UniProtKB/TrEMBL:Q6NKI2" FT /protein_id="CAE48550.1" FT /translation="MNPGWRVVDLIDFDGKVSYQRGQLAITSDSGELRATLPLAQIAVV FT LIGNKLIISGAVLVKLSEYDIAVLVCDWRRVPVAGSFSWNEHTRIAARQRAQASLSLPR FT QKSAWAQIIKAKILGQARTAAQLGFDATDLKNLARAVRSGDVDNREAMAAKRYWEIISA FT EDDFRRLPGLAATGWNGALDYAYTVLRGHGMRAICSAGLVGTLGVFHHGRGNQFALVDD FT LIEPFRPAIDYAVFSIVSNSQELDKETKRQLVAAVEEPFNSAGQSIPTVFTAFAQQYGR FT YVEGDVEKLVPPIWEGPFDAEER" FT CDS 38634..38963 FT /transl_table=11 FT /locus_tag="DIP0038" FT /product="Conserved hypothetical protein" FT /note="Similar to Pasteurella multocida hypothetical FT protein PM1125 TR:Q9CLT4 (EMBL:AE006153) (108 aa) fasta FT scores: E(): 9.3e-07, 42.85% id in 77 aa" FT /db_xref="InterPro:IPR019199" FT /db_xref="UniProtKB/TrEMBL:Q6NKI1" FT /protein_id="CAE48551.1" FT /translation="MPKKGSDPVWCVVMFDLPVKTKTQRKQATAFRQNLLDLGFCMAQL FT SVYVQYLPLAAKLSNLVKLIKEKLPPGGDVRILSVSDIQWSKMIRFSSSAEVSGEEKPD FT QLAIF" FT stem_loop 38961..39021 FT /note="Score 76: 28/30 (93%) matches, 0 gaps" FT CDS complement(38967..39077) FT /transl_table=11 FT /locus_tag="DIP0039" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKI0" FT /protein_id="CAE48552.1" FT /translation="MELFLSVEPHWGSVLKNPDRLQVAQKILFNMVFWAT" FT CDS complement(39311..39592) FT /transl_table=11 FT /locus_tag="DIP0040" FT /product="Conserved hypothetical protein" FT /note="Similar to the C-terminal region of Rickettsia FT prowazekii hypothetical protein RP756 SW:Y756_RICPR FT (Q9ZCI4) (105 aa) fasta scores: E(): 3.4, 33.33% id in 51 FT aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKH9" FT /protein_id="CAE48553.1" FT /translation="MPILALSAGSRLATVAILTYLLMRNGIPHTNHQTRSFSKTLINFS FT YGSSPLARAGVQFSKTLIDFQQHLARLAPNWGSVLKNPDRLRKKFSNC" FT repeat_region 39500..39512 FT /note="Possible inverted repeat" FT CDS join(39682..39792,39824..40033,40039..40134,40136..40459, FT 40471..40704) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0041" FT /product="Putative transposase for insertion sequence FT element (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium diphtheriae FT probable transposase for insertion sequence element FT SW:TRA_CORDI (P35879) (343 aa) fasta scores: E(): 6e-75, FT 61.11% id in 342 aa. Note: Also similar to DIP2026 to FT DIP2029 also a pseudogene (274 aa). Presents frameshifts at FT positions: 37, 107, 139 and 247" FT misc_feature 39836..39991 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT misc_feature 40133..40408 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT misc_feature 40396..40572 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT repeat_region 40714..40726 FT /note="Possible inverted repeat" FT CDS complement(40822..40923) FT /transl_table=11 FT /locus_tag="DIP0046" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKH8" FT /protein_id="CAE48555.1" FT /translation="MILTVSAEISYVSATLAQTPAMRLFFDSVPFIL" FT CDS complement(join(41066..42397,42420..42614)) FT /transl_table=11 FT /locus_tag="DIP0047" FT /product="Putative transposase (pseudogene)" FT /note="Similar to Mycobacterium smegmatis putative FT transposase TR:O70063 (EMBL:AF036759) (503 aa) fasta FT scores: E(): 4.7e-88, 50% id in 498 aa. Presents a FT frameshift at residue 65" FT /protein_id="CAE48556.1" FT /translation="MNMSPSIRRVPTASGATAVQIIWRYRNRKPDIEHVGSAHTDYDLA FT ALMAKAQRLIDGEQISLDLKVSGTGTVDNPVTVSGERAGLLLDAIRGAFQLLGLDAASG FT EDEVFFNLVQARIISLGSKFDSIETLAEVGVTSASYATIKRYLPRYADKDFRDQITHAL FT ATHAAIGPGVMVLYDVTTLYFETDVPDELRKPGFSKERRLEPQITVGMLTDSIGFPLAI FT GAFEGNRAETQTMLPMILRLKDAYHLDDITIVADAGMFSAANKTAIIDAGLDYILGTKE FT REIPEPIKAWLDTVEGRSYTDYDDGHIWTHRHHSDRRRTSGTPQAVTYYQYSYDRARRT FT RRGIGEQLDKAQRAVDGKIPVKRNRYVNLKAPNKQVNHALANKHLTLAGIKGYETSRTD FT LKPQEVIGAYRRLFKIEKSFRMAKSDLKARPIYHRKEDSIHAHLTIVMAAMATGHVLEE FT ASGLSLKRLVRTLKKYRTFTVEIAGQTLHAQTDLPADIRELAEKLPQPSD" FT misc_feature complement(41237..42079) FT /note="HMMPfam hit to PF01609, Transposase (IS4 family)" FT CDS <42736..42969 FT /transl_table=11 FT /locus_tag="DIP0049" FT /product="Putative transposase (partial)" FT /note="Similar to Corynebacterium jeikeium transposase B FT TnpB TR:AAK67710 (EMBL:AY036070) (302 aa) fasta scores: FT E(): 1.2e-06, 45.45% id in 55 aa, and to Escherichia coli FT O157:H7 EDL933 partial transposase Z1207 TR:AAG55352 FT (EMBL:AE005276) (82 aa) fasta scores: E(): 5.2e-05, 38% id FT in 50 aa" FT /db_xref="GOA:Q6NKH7" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:Q6NKH7" FT /protein_id="CAE48557.1" FT /translation="MTMLWLRMSMVPHKNELIYTYTWVDVVDVEIAAFEWVNWWNESRL FT HQSLGYRTPAEVEAEFWEHHPSREIIEIKANA" FT misc_feature 42775..42912 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS 43101..43196 FT /transl_table=11 FT /locus_tag="DIP0050" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKH6" FT /protein_id="CAE48558.1" FT /translation="MGFTMSAKAKTFAKNGLLLAVPVLEVNGDYA" FT CDS 43189..43284 FT /transl_table=11 FT /locus_tag="DIP0051" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKH5" FT /protein_id="CAE48559.1" FT /translation="MHRACLFHCDVMDNLRAEGKRCVYVVHKKND" FT CDS complement(43308..43577) FT /transl_table=11 FT /locus_tag="DIP0052" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 10.4 kDa protein Rv0011c or MT0014 or MTCY10H4.11C FT SW:Y011_MYCTU (P71581) (93 aa) fasta scores: E(): 1.5e-09, FT 41.48% id in 94 aa" FT /db_xref="InterPro:IPR009619" FT /db_xref="UniProtKB/TrEMBL:Q6NKH4" FT /protein_id="CAE48560.1" FT /translation="MPKSKINHSSTAYTAGSTANRTPVKINSTGTPLWYKIIMFGLILA FT GLLWLIVNYLAGQDISFMTELGPWNYGIGFGLFIIGLLMTMGWR" FT misc_feature complement(order(43314..43379,43410..43475)) FT /note="2 probable transmembrane helices predicted for FT DIP0052 by TMHMM2.0" FT CDS complement(43694..45715) FT /transl_table=11 FT /gene="pknB" FT /locus_tag="DIP0053" FT /product="probable serine/threonine-protein kinase" FT /EC_number="2.7.1.-" FT /note="Similar to Mycobacterium leprae probable FT serine/threonine-protein kinase PknB or ML0016 FT SW:PKNB_MYCLE (P54744) (622 aa) fasta scores: E(): 5.7e-58, FT 43.26% id in 661 aa" FT /db_xref="GOA:Q6NKH3" FT /db_xref="InterPro:IPR017441" FT /db_xref="UniProtKB/TrEMBL:Q6NKH3" FT /protein_id="CAE48561.1" FT /translation="MTDIVLADRYRLGDVIGTGGMSEVYEATDVLLGRKVAVKMLRADL FT ARDVNFRERFRREAQNSGKLNHPAIVAVYDTGETPRAGLNTPYIVMELVNGRTLRDIVR FT EDGPLTPSQAAHTLIPVCHALQVSHDAGIIHRDIKPANVMITNTGAVKIMDFGIARALD FT DATSAMTQTSAVIGTAQYLSPEQARGKLADARSDVYALGCVLYETLTGKPPFEGETPFA FT VAYQHVQEDPVKPSEYIADLSPTAAINVDAVVLTAMAKHPGDRYQTAQEMCADLERLGR FT NAVTDAARHYVTPTSFATQDPASTTVVPVTQVTELDHAEAGAGIGAGVVPAGAVAGSAA FT VAGSGGAHAAPRSSNRGLRILAAILAVLVLAVGAGFAIDYFGGGPFSQRSTVTIPKLQN FT STQQDAVNQLEKLGLQVNVIEEPNPDIPRGKVIRTNPTDGSNVQRNSTVRLTISSGKEI FT TEVPDLSGKNTADAVKILEAAGLLLDPTVREDSSDTVPKGEIIEVSPAAGSQVSRGSKV FT SITVSTGVETVRVPVITGMKWDQAEGNLTSLGFKPEVVRVDSVEPAGTVVAVPDEGAEV FT PKGSSVTVQISNGAMFTVPEITRQTIDDAVRILHDAGWKGNASRLIQAAKVPTVAVTDQ FT NLIASQLPTPGTALRKDAPIEIRLYEFNLAALVPPAQH" FT misc_feature complement(order(44570..44635,44675..44740)) FT /note="2 probable transmembrane helices predicted for FT DIP0053 by TMHMM2.0" FT misc_feature complement(44879..45688) FT /note="HMMSmart hit to SM00220, Serine/Threonine protein FT kinases, catalytic domain" FT /note="ProfileScan hit to PS50011, Protein kinase domain FT profile." FT misc_feature complement(44888..45688) FT /note="HMMSmart hit to SM00219, Tyrosine kinase, catalytic FT domain" FT misc_feature complement(44978..45688) FT /note="HMMPfam hit to PF00069, Protein kinase domain" FT misc_feature complement(45281..45319) FT /note="ScanRegExp hit to PS00108, Serine/Threonine protein FT kinases active-site signature." FT misc_feature complement(45599..45670) FT /note="ScanRegExp hit to PS00107, Protein kinases FT ATP-binding region signature." FT CDS complement(45712..47217) FT /transl_table=11 FT /gene="pknA" FT /locus_tag="DIP0054" FT /product="probable serine/threonine-protein kinase" FT /EC_number="2.7.1.-" FT /note="Similar to Mycobacterium leprae probable FT serine/threonine-protein kinase PnkA or ML0017 FT SW:PKNA_MYCLE (P54743) (437 aa) fasta scores: E(): 4e-37, FT 41.99% id in 431 aa" FT /db_xref="GOA:Q6NKH2" FT /db_xref="InterPro:IPR017441" FT /db_xref="UniProtKB/TrEMBL:Q6NKH2" FT /protein_id="CAE48562.1" FT /translation="MTQSQSPDPALQALVGSDYALQWVVGNGGMSTVWLADDLRNQREV FT AIKVLRPEFSDNEEFLSRFRNEALASEHIDSDNVVRTYDYREVTDDMGRTLCFIVMEYV FT RGESLADMLARKGRLEEDLALDVLEQAAHGLSIIHRMGMVHRDIKPGNLLITQNGQVKI FT TDFGIAKAAAAVPLTRTGMVVGTAQYVSPEQAQGRDVTAATDVYSLGVVGYEMLVGQRP FT FTGDSSVSVAIAHINQAPPAMPTSVSAPARELIGIALRKDPAHRYADGNELALAVSATR FT MGQRPPQPKSAPLQHIAPQPAPTESTYALGATAQPTTVIPATGQVPAAPAAAAYPASTV FT IPAGTPRQEPEKQSSGWGAGIVVGALAALLLGTAAWAASQGMFDDLFDKTSQSSESSVP FT PPPVTATVTETPTPQITTVIPEPLPTSSPEPTPSETEHTPDDSHPSSDHQLPSVRPSHN FT GRPSSQAPHAPTQDADQPAESPAPDTLGSLIENLNKLNQGGAQ" FT misc_feature complement(45772..46023) FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature complement(45778..45855) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(45892..45942) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(45949..46014) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(46309..46347) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(46372..47163) FT /note="ProfileScan hit to PS50011, Protein kinase domain FT profile." FT misc_feature complement(46384..47163) FT /note="HMMSmart hit to SM00220, Serine/Threonine protein FT kinases, catalytic domain" FT misc_feature complement(46387..47163) FT /note="HMMSmart hit to SM00219, Tyrosine kinase, catalytic FT domain" FT misc_feature complement(46417..47163) FT /note="HMMPfam hit to PF00069, Protein kinase domain" FT misc_feature complement(46753..46791) FT /note="ScanRegExp hit to PS00108, Serine/Threonine protein FT kinases active-site signature." FT misc_feature complement(47074..47145) FT /note="ScanRegExp hit to PS00107, Protein kinases FT ATP-binding region signature." FT CDS complement(47230..48690) FT /transl_table=11 FT /gene="pbpA" FT /locus_tag="DIP0055" FT /product="Putative secreted penicillin-binding protein" FT /note="Similar to Mycobacterium leprae putative FT penicillin-binding protein PbpA or ML0018 TR:Q9CDE6 FT (EMBL:AL583917) (492 aa) fasta scores: E(): 1.3e-72, 45.9% FT id in 488 aa" FT /db_xref="GOA:Q6NKH1" FT /db_xref="InterPro:IPR001460" FT /db_xref="UniProtKB/TrEMBL:Q6NKH1" FT /protein_id="CAE48563.1" FT /translation="MNRSIRFTSVFALLLILILLVNLTIIQGFSQEKYAHNALNRRGFI FT ELKSQARGQISTGGQVLAESYQDEEGFYQRRYVTNPAIYGPIEGYLSDIYGASGMESNL FT NGVLSGTDSSVSVRRWTDELLGRKHSGANVELTLLPQVQEVAYNQMANAGYEGAVVAIK FT PSTGEILAMASTPSYDPSAIVNPDTAEQTWAALNADPGNPLLNHATQETLPPGSTFKVI FT TTAAGLNAGYGPGSMLTGQDRITLPDGITTLENYAGQTCAGSQNVTLATAFQYSCNTAF FT VQMGIDVGKEKFDEAAHAFGVNDRYDLGVDMAPGTIGDVSDPSARGQSSIGQRDVAMSV FT LHNAVVAATVANGGKRMEPHLVNRIVGQDLKVIKETKPHQINEAVTPEVAATLTDLMRL FT SERHTAGYTGADIASKTGTAEHGEDSRNSNPHAWYIAFGPSANADVAVAVVVKNGGDAG FT QAATGGSVAAPIGRAVIAAAQAALAARG" FT misc_feature complement(47272..48273) FT /note="HMMPfam hit to PF00905, Penicillin binding protein FT transpeptidase domain" FT misc_feature complement(48607..48690) FT /note="Signal peptide predicted for DIP0055 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.438 between residues 28 and 29" FT CDS complement(48687..50036) FT /transl_table=11 FT /gene="ftsW" FT /locus_tag="DIP0056" FT /product="probable cell division protein" FT /note="Similar to Mycobacterium tuberculosis probable cell FT division protein FtsW or Rv0017c or MT0020 or MTCY10H4.17c FT SW:FTSW_MYCTU (P71587) (469 aa) fasta scores: E(): 8.7e-72, FT 48.61% id in 434 aa, and to Escherichia coli rod FT shape-determining protein MrdB or RodA or B0634 or Z0780 or FT ECS0672 SW:RODA_ECOLI (P15035) (370 aa) fasta scores: E(): FT 8.5e-19, 26.57% id in 365 aa" FT /db_xref="GOA:Q6NKH0" FT /db_xref="InterPro:IPR001182" FT /db_xref="UniProtKB/TrEMBL:Q6NKH0" FT /protein_id="CAE48564.1" FT /translation="MTSLRRITARPVEFGLLVMATLLIAVTLINLNMAQGLSVTSETLW FT VIGGFIGVFTIAHLALCFTAPHADQVMLPVASVLNGLGLVMVYRIDLARDTALASRQVI FT WTLVGILLMIAVLVFIRDHRMLSRYSYVLGLLGLILLALPMVWPTKMNADANIWISIGP FT FSVQPGEFSKILLLIFFAQLLVNKRALFNVAGYRFLGLEFPRLRDLGPILGVWAFAILV FT MAGENDFGPALLLFSTVLGMLYLATNRVSWLIIGAALVAVGGTALYQISSKIQSRVTNF FT INPLDNFNGTGYQLSQSLFGLSSGGVAGAGLGLGHPELIPVAESDFILAAVGEELGFIG FT LAAVLVLFAIFITRGLRTALRARDSYGKLMAAGLSLTLAIQVFVVTAGITALMPMTGLT FT TPFMSQGGSSLMANYILLGLILRISHSTQAAANDVVSMDEQAARGQEAHR" FT misc_feature complement(48750..49832) FT /note="HMMPfam hit to PF01098, Cell cycle protein" FT misc_feature complement(order(48768..48833,48864..48929,48981..49046, FT 49092..49157,49221..49286,49332..49397,49479..49544, FT 49590..49655,49677..49727,49758..49823,49839..49904, FT 49935..50000)) FT /note="12 probable transmembrane helices predicted for FT DIP0056 by TMHMM2.0" FT CDS complement(50037..51494) FT /transl_table=11 FT /locus_tag="DIP0057" FT /product="Putative phosphoprotein phosphatase" FT /note="Similar to Mycobacterium leprae probable FT phosphoprotein phosphatase Ppp TR:Q50188 (EMBL:Z70722) (509 FT aa) fasta scores: E(): 5.8e-46, 43.64% id in 488 aa" FT /db_xref="GOA:Q6NKG9" FT /db_xref="InterPro:IPR014045" FT /db_xref="UniProtKB/TrEMBL:Q6NKG9" FT /protein_id="CAE48565.1" FT /translation="MMLRLNYAAASDRGLVRGNNEDSAYAGPHLIALADGMGGHAAGEV FT ASQLMINHLMRLDADVDDNDMLALLASVADDANRAIAQGVRDVPETDGMGTTLTALMFN FT GADLAMCHVGDSRGYRLRDGALEQITVDDTYVQSLVDKGQLAPEDVSTHPQRSMILKAY FT TGRPVEPTLKMIDIRPGDRFLLCSDGLSDPVTHSTIETTLQQGTPQEAARRLVDLALRS FT GGPDNVTVVVADVVEADGSDKSAAAASLPVTPLTVGALNSGMPEDPRPDTAAGRAAMAI FT AQRQPQVILPDPEPVKEATPSPRRRMVAVISALVVLAVLISAGWWGSSMVKNNYYVTTA FT DSDSAQGALVIENGIDVSLLGKSLHSTYQFACLSPEGDLTFVDSADAEKSCHRFRLSDL FT KESARGQVSTLPDGSYDEVQQQLQRLAEQTLPACITRQAAHPKDKDKKKPAAPSSAAPT FT TTKAASPSSTGSPDDLSTPGETCREVK" FT misc_feature complement(50508..50573) FT /note="1 probable transmembrane helix predicted for DIP0057 FT by TMHMM2.0" FT misc_feature complement(50781..51215) FT /note="ProfileScan hit to PS50170, Protein phosphatase 2C, FT box 2." FT misc_feature complement(50790..51464) FT /note="HMMSmart hit to SM00331, Sigma factor PP2C-like FT phosphatases" FT misc_feature complement(50796..51491) FT /note="HMMSmart hit to SM00332, Serine/threonine FT phosphatases, family 2C, catalytic domain" FT misc_feature complement(50811..50990) FT /note="HMMPfam hit to PF00481, Protein phosphatase 2C" FT misc_feature complement(50814..51446) FT /note="BlastProDom hit to PD006823, PD006823" FT CDS complement(51491..51979) FT /transl_table=11 FT /locus_tag="DIP0058" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium leprae hypothetical 17.2 FT kDa protein MLB1770.14c or ML0021 TR:Q50189 (EMBL:Z70722) FT (155 aa) fasta scores: E(): 2.3e-13, 35% id in 160 aa" FT /db_xref="InterPro:IPR000253" FT /db_xref="UniProtKB/TrEMBL:Q6NKG8" FT /protein_id="CAE48566.1" FT /translation="MESVIVFLLRIALLVLLWLLILLALYIQRKDAKSAAQTMVAPQAV FT TGLGVSSASSPLKKVSRRGGAPQQIVVVEGPLTGSSMQLDSLTEITLGRSKDCDFVVGD FT DYASARHARLIKRGSEWFAEDLDSRNGTYVGGYRIDQPEKVSAGSDIKIGRTTVRLVA" FT misc_feature complement(51518..51712) FT /note="HMMPfam hit to PF00498, FHA domain" FT misc_feature complement(51563..51712) FT /note="ProfileScan hit to PS50006, Forkhead-associated FT (FHA) domain profile." FT misc_feature complement(51563..51715) FT /note="HMMSmart hit to SM00240, Forkhead associated domain" FT misc_feature complement(51878..51979) FT /note="Signal peptide predicted for DIP0058 by SignalP 2.0 FT HMM (Signal peptide probability 0.995) with cleavage site FT probability 0.794 between residues 34 and 35" FT CDS complement(51993..52859) FT /transl_table=11 FT /locus_tag="DIP0059" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 30.8 FT kDa protein SCH69.13 TR:Q9XA21 (EMBL:AL079308) (290 aa) FT fasta scores: E(): 3.1e-11, 27.6% id in 297 aa" FT /db_xref="InterPro:IPR000253" FT /db_xref="UniProtKB/TrEMBL:Q6NKG7" FT /protein_id="CAE48567.1" FT /translation="MSIMGKVAKLDSAMQRGLDNSFAFVFGGKLVPAEIEELLKQEVQD FT NIVRAYEGGVESPNVFRVRVSRKDAQNLAQRYPSLADDFADRLSRYTRNQGWSTEGPVV FT VTIAADSGLRTGQLHASSAFDPVPQEYSHFIGVEDDVAAAAPTNDESNYESESGMNSYD FT ADPRTEYMTAQAPDAIYTEVPVPEPKATPTVSLLLQDGSSRTYLVEEGSNIIGRSNEAH FT FRLPDTGVSRQHAEITWNGRDAILTDLKSTNGTTVNDTPVENWLLEDGDVITVGHSHIE FT VRIVEPN" FT misc_feature complement(52032..52223) FT /note="HMMPfam hit to PF00498, FHA domain" FT misc_feature complement(52074..52223) FT /note="ProfileScan hit to PS50006, Forkhead-associated FT (FHA) domain profile." FT misc_feature complement(52074..52226) FT /note="HMMSmart hit to SM00240, Forkhead associated domain" FT misc_feature complement(52170..52187) FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT tRNA 53080..53163 FT /gene="tRNA-Leu" FT /product="transfer RNA-Leu" FT /anticodon=(pos:53114..53116,aa:Leu) FT /note="tRNA Leu anticodon CAG, Cove score 57.69" FT CDS complement(join(53337..53534,53536..53667,53667..53720)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0060" FT /product="IS1628 transposase (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium glutamicum FT IS1628 transposase TnpB TR:Q9X542 (EMBL:AF121000) (236 aa) FT fasta scores: E(): 9e-47, 86.923% id in 130 aa. Presents FT frameshifts at residues 18 and 62" FT /db_xref="PSEUDO:CAE48568.1" FT CDS complement(53813..56047) FT /transl_table=11 FT /locus_tag="DIP0061" FT /product="Putative cation-transporting ATPase" FT /note="Similar to Enterococcus hirae probable copper FT exporting ATPase B CopB SW:COPB_ENTHR (P05425) (745 aa) FT fasta scores: E(): 2.2e-94, 43.228% id in 731 aa, and to FT Mycobacterium tuberculosis probable cation-transporting FT ATPase V CtpV or Rv0969 or MT0997 or MTCY10D7.05c FT SW:CTPV_MYCTU (P77894) (770 aa) fasta scores: E(): 2e-69, FT 40.092% id in 651 aa" FT /db_xref="GOA:Q6NKG6" FT /db_xref="InterPro:IPR008250" FT /db_xref="UniProtKB/TrEMBL:Q6NKG6" FT /protein_id="CAE48569.1" FT /translation="MNTPNHSGDHHGDHPAPETDHTYHPDHASHEHHADADTHGHAKPH FT DHPHSALDEDHHVHGHGEHAGHSTAMFRERFWWSLILSIPVVIFSPMVAHLLGYHLPAF FT PGSTWIPPVLGTIIFVYGGTPFLKGGWNELKSRQPGMMLLIAMAITVAFVASWVTTLGL FT GGFELDFWWELALLVTIMLLGHWLEMSALGAASSALDALAALLPDEAEKVIDGTTRTVA FT ISELIVDDVVLVRAGARVPADGTILDGAAEFDEAMITGESRPVFRDTGDKVVAGTVATD FT NTVRIRVEATGGDTALAGIQRMVADAQESSSRAQALADRAAALLFWFALISALITAVVW FT TIIGSPDDAVVRTVTVLVIACPHALGLAIPLVIAISSERAAKSGVLIKDRMALERMRTI FT DVVLFDKTGTLTEGAHAVTGVAAAVGVTEGELLALAAAAEADSEHPVARAIVAAAAAHP FT EASRRQIRATGFSAASGRGVRATVDGAEILVGGPNMLREFNLTTPAELTDTTSAWTGRG FT AGVLHIVRDGQIIGAVAVEDKIRPESRAAVKALQDRGVKVAMITGDAQQVAQAVGQDLG FT IDEVFAEVLPQDKDTKVTQLQDRGLSVAMVGDGVNDAPALTRADVGIAIGAGTDVAMES FT AGVVLASDDPRAVLSMIELSQASYRKMIQNLIWASGYNILAVPLAAGVLASIGFVLSPA FT VGAILMSASTIVVALNAQLLRRIDLDPAHLAPTESKEEHTTPTPASTAVH" FT misc_feature 53813..60917 FT /note="Anomalous G+C content (63.8%) and dinucleotide FT signature. Putative metal transport system. Present also in FT C.glutamicum" FT misc_feature complement(order(53906..53971,53984..54049,54923..54988, FT 55019..55084,55487..55537,55553..55618,55658..55723, FT 55754..55819)) FT /note="8 probable transmembrane helices predicted for FT DIP0061 by TMHMM2.0" FT misc_feature complement(53969..54013) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(54062..54139) FT /note="FPrintScan hit to PR00120, H+-transporting ATPase FT (proton pump) signature" FT misc_feature complement(54125..54163) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54161..54853) FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT misc_feature complement(54173..54232) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54182..54232) FT /note="FPrintScan hit to PR00120, H+-transporting ATPase FT (proton pump) signature" FT misc_feature complement(54248..54301) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(54266..54316) FT /note="FPrintScan hit to PR00120, H+-transporting ATPase FT (proton pump) signature" FT misc_feature complement(54359..54391) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54422..54457) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54629..54808) FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature complement(54797..54841) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54815..54835) FT /note="ScanRegExp hit to PS00154, E1-E2 ATPases FT phosphorylation site." FT misc_feature complement(54845..54892) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(54863..55522) FT /note="HMMPfam hit to PF00122, E1-E2 ATPase" FT misc_feature complement(55244..55288) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(55403..55459) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(55514..55555) FT /note="ScanRegExp hit to PS01039, Bacterial extracellular FT solute-binding proteins, family 3 signature." FT misc_feature complement(55613..55672) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(55847..56032) FT /note="ProfileScan hit to PS50316, Histidine-rich region." FT CDS complement(56099..56425) FT /transl_table=11 FT /locus_tag="DIP0062" FT /product="Putative heavy metal-associated transport FT protein" FT /note="Similar to Deinococcus radiodurans conserved FT hypothetical protein DR2452 TR:Q9RRN6 (EMBL:AE002074) (68 FT aa) fasta scores: E(): 0.0038, 43.103% id in 58 aa, and to FT Streptococcus pyogenes putative copper chaperone-copper FT transport operon CopZ or SPY1714 TR:Q99YG6 (EMBL:AE006600) FT (67 aa) fasta scores: E(): 0.0065, 40.000% id in 60 aa, and FT to Pseudomonas syringae Plasmid pPaCu1 copper resistance FT operon ORFH protein TR:Q9KWM7 (EMBL:AB033420) (65 aa) fasta FT scores: E(): 0.025, 40.000% id in 60 aa, and to Candida FT albicans copper-transporting p-type ATPase Ccc2 TR:AAK52331 FT (EMBL:AY033084) (1204 aa) fasta scores: E(): 0.03, 28.571% FT id in 84 aa" FT /db_xref="GOA:Q6NKG5" FT /db_xref="HSSP:1K0V" FT /db_xref="InterPro:IPR006121" FT /db_xref="UniProtKB/TrEMBL:Q6NKG5" FT /protein_id="CAE48570.1" FT /translation="MITSPSRLLPMASHGCSCCGPASHADTASIPAASDSSAGGSSPSY FT QVTGLTCGHCAKSVTQALQALPQVDDVQIDLAAGGVSTVTVTGVVPPEMVRRAIEEAGY FT TVLS" FT misc_feature complement(56102..56299) FT /note="HMMPfam hit to PF00403, Heavy-metal-associated FT domain" FT misc_feature complement(56198..56287) FT /note="ScanRegExp hit to PS01047, Heavy-metal-associated FT domain." FT misc_feature complement(56351..56425) FT /note="Signal peptide predicted for DIP0062 by SignalP 2.0 FT HMM (Signal peptide probability 0.861) with cleavage site FT probability 0.476 between residues 25 and 26" FT CDS complement(56540..57667) FT /transl_table=11 FT /locus_tag="DIP0063" FT /product="Putative two-component system sensor protein" FT /note="Similar to Escherichia coli sensor protein BaeS or FT B2078 SW:BAES_ECOLI (P30847) (467 aa) fasta scores: E(): FT 1.8e-28, 33.333% id in 372 aa" FT /db_xref="GOA:Q6NKG4" FT /db_xref="InterPro:IPR003660" FT /db_xref="UniProtKB/TrEMBL:Q6NKG4" FT /protein_id="CAE48571.1" FT /translation="MNPGPGLTFRFLAAQVLVVVISLMVAAAVATMVGPTLFHDHMLMA FT GREDPSLGLFHAEQAYRDANLITLAVALPTALISALLASLWLSRRLRTPLQDLTRAATS FT LAAGNSRIRVPAGGAGPEVATLAHAFNTMADRLEHTEQVRRQMLSDLAHEMGTPLSVLT FT AYLDGLQDGVVDWNNANHTIMADQLTRLTRLMEDIDYVSRAQEHRIDLDLAEEGLGDLL FT HTAAAAAGEAYADKGVDLQVETITDTARVVVDRQRFGQVMSNLLSNALRHTPVGGQVRI FT SVHRQGASTALIHVADDGEGIPPGQLGHIFERFYRGDAARSRDNGGSGIGLTISKALIE FT AHGGTLTATSPGPGRGAVFTLRLPLSPPDSEEAAR" FT misc_feature complement(56567..56911) FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT /note="HMMSmart hit to SM00387, Histidine kinase-like FT ATPases" FT misc_feature complement(56567..57220) FT /note="ProfileScan hit to PS50109, Bacterial histidine FT kinase domain." FT misc_feature complement(56576..56617) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(56636..56692) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(56711..56743) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(56753..56797) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(57047..57241) FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain" FT /note="HMMSmart hit to SM00388, His Kinase A FT (phosphoacceptor) domain" FT misc_feature complement(57242..57403) FT /note="HMMSmart hit to SM00304, HAMP (Histidine kinases, FT Adenylyl cyclases, Methyl binding proteins, Phosphatases) FT domain" FT misc_feature complement(57251..57463) FT /note="HMMPfam hit to PF00672, HAMP domain" FT misc_feature complement(order(57404..57469,57557..57622)) FT /note="2 probable transmembrane helices predicted for FT DIP0063 by TMHMM2.0" FT CDS complement(57664..58386) FT /transl_table=11 FT /locus_tag="DIP0064" FT /product="Putative two-component system response regulator" FT /note="Similar to Enterococcus faecalis VicR protein FT TR:Q9REA7 (EMBL:AJ012050) (283 aa) fasta scores: E(): FT 5.5e-35, 44.978% id in 229 aa, to Bacillus subtilis FT alkaline phosphatase synthesis transcriptional regulatory FT protein PhoP SW:PHOP_BACSU (P13792) (240 aa) fasta scores: FT E(): 3e-34, 42.918% id in 233 aa, and to Bacillus subtilis FT hypothetical sensory transduction protein YycF FT SW:YYCF_BACSU (P37478) (235 aa) fasta scores: E(): 1.8e-33, FT 43.478% id in 230 aa" FT /db_xref="GOA:Q6NKG3" FT /db_xref="HSSP:1B00" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NKG3" FT /protein_id="CAE48572.1" FT /translation="MADHTPTTATPPGRVLVVDDEQPLAQMVASYLIRAGFDTRQAHTG FT TQAVDEARRFSPDVVVLDLGLPELDGLEVCRRIRTFSDCYILMLTARGSEDDKISGLTL FT GADDYITKPFSIRELVTRVHAVLRRPRTSTTPPQVTTPLIVGDLILDPVAHQVRVEETI FT VELTRTEFELLVALALRPGQALTRHDLVTEVWDTTWVGDERIVDVHIGNLRRKLGTDTR FT GRGFIDTVRGVGYRMGQP" FT misc_feature complement(57685..57903) FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal" FT misc_feature complement(57994..58350) FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature complement(58006..58347) FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature complement(58018..58350) FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT CDS 58730..59365 FT /transl_table=11 FT /locus_tag="DIP0066" FT /product="Putative exported protein" FT /note="No database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKG2" FT /protein_id="CAE48573.1" FT /translation="MAPTLRRCLLTVLPRAKEIDVKRAAIAAAALALALTGCSAADPEP FT TADGTVSQDTFLTTHGLADMDAVEIIDHLDRQKVTERPTDLIASVRADELLLSSGDQEV FT VVDLPDNQTYVSIAPYLTSTHDCFYHSLTTCQGELSNEDIQVKITDEATGEVLVDEATT FT TFDNGFIGFWLPDDVTGLIEVSYQGRTGTTEFSTTDDGATCVTDLRLT" FT misc_feature 58730..58852 FT /note="Signal peptide predicted for DIP0066 by SignalP 2.0 FT HMM (Signal peptide probability 0.927) with cleavage site FT probability 0.560 between residues 46 and 47" FT CDS 59436..60917 FT /transl_table=11 FT /locus_tag="DIP0067" FT /product="Putative exported multicopper oxidase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT copper-binding protein, putative MT0869 TR:AAK45112 FT (EMBL:AE006975) (504 aa) fasta scores: E(): 9e-68, 43.028% FT id in 502 aa, and to Nicotiana tabacum L-ascorbate oxidase FT precursor Aao SW:ASO_TOBAC (Q40588) (578 aa) fasta scores: FT E(): 2.5e-14, 25.344% id in 509 aa. Note: Contains a FT putative twin-arginine translocation (TAT) system FT recognition motif (RRQFLL) at the N-terminal region" FT /db_xref="GOA:Q8GP36" FT /db_xref="HSSP:1HFU" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/TrEMBL:Q8GP36" FT /protein_id="CAE48574.1" FT /translation="MTNAFSRRQFLLGGLVLAGTGAVAACTSDPGPAASAPGSSLRPTP FT TPTALGEPTVRRTLTARPLSLDIGGIEAKTWGYVSDTGDAAIEATAGDVLQVDITNELP FT ESTSIHWHGIALHNAADGVPGMTQDPIEPGESFSYVFEVPHGGTYFYHSHTGLQLDRGL FT HAPLIIRDPQDAEDQDVEWTIVLDDWVDGIQGTPDDELDKLTGMGSGDHNGKKGMGGHG FT HMMHGTPDRVLGGDAGDVMYPHYLINGRIPRAHRTFEARPGDKARLRFINSGGDTIFKV FT ALGGHRMTVTHTDGFPVQPWETESIYLSMGERVDVEVILGDGIFPLTALAVGKDDRAFA FT VIRTAGGQAPHPDVDFPELSSTGLLLSSLKPADRALLPEGTPDREVSIDLGGQMMPYEW FT RILTDGQSSSATVQEGQRLRMVMRNRTMMPHPMHIHGHTWALPGSGGLRKDTVLLRHGE FT TMIADLIADNPGEWAFHCHNAYHMETGMLSSLRYE" FT misc_feature 59436..59588 FT /note="Signal peptide predicted for DIP0067 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.505 between residues 51 and 52" FT misc_feature 59454..59471 FT /note="Potential twin-arginine recognition motif RRQFLL" FT misc_feature 59562..59954 FT /note="HMMPfam hit to PF00394, Multicopper oxidase" FT misc_feature 59874..59936 FT /note="ScanRegExp hit to PS00079, Multicopper oxidases FT signature 1." FT misc_feature 60105..60476 FT /note="HMMPfam hit to PF00394, Multicopper oxidase" FT misc_feature 60219..60248 FT /note="ScanRegExp hit to PS00215, Mitochondrial energy FT transfer proteins signature." FT misc_feature 60567..60914 FT /note="HMMPfam hit to PF00394, Multicopper oxidase" FT misc_feature 60843..60905 FT /note="ScanRegExp hit to PS00079, Multicopper oxidases FT signature 1." FT misc_feature 60858..60893 FT /note="ScanRegExp hit to PS00080, Multicopper oxidases FT signature 2." FT CDS complement(60895..61203) FT /transl_table=11 FT /locus_tag="DIP0068" FT /product="Hypothetical protein" FT /note="Weak similarities to Streptomyces coelicolor FT putative DNA polymerase III, epsilon chain SCI8.12 FT TR:Q9RJ41 (EMBL:AL132644) (328 aa) fasta scores: E(): 2.7, FT 42.22% id in 45 aa, and to Thermotoga maritima DNA FT polymerase III PolC-type PolC or TM0576 SW:DPO3_THEMA FT (Q9ZHF6) (1367 aa) fasta scores: E(): 9.3, 39.58% id in 48 FT aa" FT /db_xref="GOA:Q6NKG0" FT /db_xref="InterPro:IPR013520" FT /db_xref="UniProtKB/TrEMBL:Q6NKG0" FT /protein_id="CAE48575.1" FT /translation="MSVWASRLKAMGLLENLLNRYTPRTSGTPVFAVIDTGTTGFNKRY FT DHIIELAAVRADAYFKPVDSWHALLNPDTNAVSTTRGTPPPTSALNPAVGVTRSEAS" FT CDS join(61342..62073,62073..62645) FT /pseudo FT /transl_table=11 FT /gene="tnp1250A" FT /locus_tag="DIP0069" FT /product="transposase (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium striatum FT transposase Tnp1250A or Tnp1250B TR:Q9ET89 (EMBL:AF024666) FT (416 aa) fasta scores: E(): 1.3e-143, 88.38% id in 396 aa. FT Presents a frameshift at residue 244" FT /db_xref="PSEUDO:CAE48576.1" FT misc_feature 61471..62070 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT misc_feature 62082..62537 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT misc_feature 62094..62168 FT /note="ScanRegExp hit to PS01007, Transposases, Mutator FT family, signature." FT CDS complement(62898..63353) FT /transl_table=11 FT /locus_tag="DIP0071" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKF9" FT /protein_id="CAE48577.1" FT /translation="MKLSPHCSLPLTLGGTTDQVASQCYEHEIIDNDFVTELEGFIDIE FT NIEPGDEGRKIICRVENGRCVTVTMAYLDLPITDTFLGLGLNYGPNAKAQFLAGLRHQG FT VEVIAQSEYIILPNDFVTIELGESITWWDRAYWGTDGFLNEAISLQP" FT CDS complement(63350..63850) FT /transl_table=11 FT /locus_tag="DIP0072" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKF8" FT /protein_id="CAE48578.1" FT /translation="MLASQTQKLTHRINHDARRSEPSTRFSHIRFRLLRDSMDFSKSPV FT TSIVLNAPVNDYSAILTDFKFFDNPLFSHLSGKLLIGESMRNIKFGAKRDMVTSAEIID FT IVASDSFMGIPLSQRAKTFYHSLLTAGIEAKMDKWGIELANQPVGFSTEKGKIASIHWS FT ASR" FT CDS complement(63823..64218) FT /transl_table=11 FT /locus_tag="DIP0073" FT /product="Conserved hypothetical protein" FT /note="Weakly similar to Rhizobium loti MLR2640 protein FT TR:Q98HZ4 (EMBL:AP003000) (140 aa) fasta scores: E(): 4.2, FT 27.1% id in 107 aa" FT /note="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NKF7" FT /protein_id="CAE48579.1" FT /translation="MDFLKQPCAPLDFDLSREQIEGMLRSARFIKGSFSTRVVGHLPID FT NSFRQVSVAIENETSSSIEIMTLERGDTFCGIPLKQRKIPFQNSLKSADIDFTYDDSGI FT DLTNAPVSFFIEGGRVASICWHHKHRN" FT CDS complement(64253..64393) FT /transl_table=11 FT /locus_tag="DIP0074" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKF6" FT /protein_id="CAE48580.1" FT /translation="MQEGKVEEAFRIEYEFISQTFPGKYGQALDEMMAYTRQQGLISSP FT A" FT CDS 64602..66083 FT /transl_table=11 FT /locus_tag="DIP0075" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKF5" FT /protein_id="CAE48581.1" FT /translation="MADDPLYLDRTGEWAGLWWLPEIPDEKVPGFLRYDAECGLLLSLI FT GAFEDRVTSNPSPGVTAYHEGTRTWEVIHGVAEQREITLFDTIPISSKRTIGARVESPA FT KQTVTASVAIIGAHVRSEGDPQFAGVEVSVEDLGRWAGSSVFEGLLGAPDGNFDGTGSI FT SVKPVEAQSVLVGGTEYRLVHTHTLPYFDQRKSETVGRMRDTVSIRIVPASPFSLNAAL FT HEASLVQDLISLATHQSAGVIWLRVEVARSESQLPDGRTSPRRRADVLYSPVALGKHDA FT KPVDHHRMFFTCNSLPFEEVLPRWCETHVRLQAATNMILGLRYAPARFVENNLLTAVGA FT AEALHRNLRIGEKPFSKAEFTAMRGAMLDQVPSEHRERFKAAIRNDPTLRDRLHALAAR FT PDEEAIGQLIPDVDYWAKRTTRARNDLAHEGRTPNHSFEELVAIVEVTTAVVILNVLQE FT LGLSAERQREIVLTHPKLRHTVGLSREWLVPSKSD" FT misc_feature 64602..64688 FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS 66426..66797 FT /transl_table=11 FT /locus_tag="DIP0076" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKF4" FT /protein_id="CAE48582.1" FT /translation="MYDNTTDTKMQAERQKKSCTTVGGVLAYSVPTGLHRCDSAVTRVE FT EVHMAEMVEIPAALYGRGAVRVVPVDSTVRLDVKIPAALMRKLMIESNRSGVPLTKIVD FT RLLSAAIAQDSEQEEIRPR" FT CDS 66921..67721 FT /transl_table=11 FT /locus_tag="DIP0077" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="GOA:Q6NKF3" FT /db_xref="UniProtKB/TrEMBL:Q6NKF3" FT /protein_id="CAE48583.1" FT /translation="MEEIWLSCHALVFHTTPTQRLCVGWGELAVGRFVKMAAAPAPEMT FT PRLDVSKNATDPDSLTDHGFQYSRHRPVITDHKRFDRLVGFSIKQSNVELAAEAIKQAA FT TVWCLTEKKSDKRDEDSVKFLATYLYKESLYWGKIDPRRALQRATAESWLGSQSFAPTS FT ARTYKAVLHTAGRVLYPAEFPPANRYSNPRAKPVDPASVELIDELYGVAATLPAVHRLR FT LQLILDLTTQSGLRSAEVLDLRGSDVTARILDTGERIALVRVHR" FT CDS 67740..68582 FT /transl_table=11 FT /locus_tag="DIP0078" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKF2" FT /protein_id="CAE48584.1" FT /translation="MPVISPARSKRLLDHAKTVGRGHFFPSPSGGRPYNSSVANVFRYL FT RERGFPSTTVEALRARWLVDLANSPLPAAMVFQLAGNSHYWSLATHHDHLMSMEPKGVA FT ELMLRAKGVGMISMLEHGFVIKADVWSRAQEVIRRGYAAEYIEQINAQYRGAGGRKATA FT VVPSIEAVLTAGLALIMIGKPASIAGIHRLLCELEPDQRLECGFAKDGALLAYPAFANW FT LTRQLEVFDPGADLVARRVLNHVHREQLAARTAEQREASELARARRDELVNLIVAGSR" FT CDS 68563..69828 FT /transl_table=11 FT /locus_tag="DIP0079" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKF1" FT /protein_id="CAE48585.1" FT /translation="MLPAVDDRCSGGYAGDVVADETIIDLAGPSEGLGVRPDKQRAAAY FT AGAYYIRDKTHQLGTGEKMREVTKRGFGIGVTAVSRVGSADDLYSVSPVITAISIDKPS FT PGSTVALGRALQMHQANGFAASVKTKANARLPYLCVDMGYSVRPDFTTVVHDHGFAPVM FT RYPVSRQTVWASEKPEFGSQSPGPVQINSAFYCPAALPLARQRRLVRRLNELLDEQDGF FT EAHDQALQKLLPLLMGTNSRPLKFVSKRKRSPETIPTYQIDLVCPAVQGRVKCPLKPES FT LIIAFDQPEVKPTWSADRYRCCSKSQIRHTYSSEQWKLAQWGMVPGSWEHAIYYEAARS FT LTEQRFSIMKSQHLSGREHLKWSPRREPMISVIIALWIAATNLAIQDSHVAKMPRPSSI FT KKQKRRLERDLGRALMSTPPRT" FT CDS 69994..70125 FT /transl_table=11 FT /locus_tag="DIP0080" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKF0" FT /protein_id="CAE48586.1" FT /translation="MLEGDQMGFRVDFLPGVLLRGSSGLLIFDLGSSFETLVVDLGS" FT CDS 70294..70473 FT /transl_table=11 FT /locus_tag="DIP0081" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKE9" FT /protein_id="CAE48587.1" FT /translation="MARSRNGSTIVGRKSLVPRRRNRLALKHCLTVWVFVRGRNGELCR FT PTKLPDFSGDDVHG" FT CDS 70504..70929 FT /transl_table=11 FT /locus_tag="DIP0082" FT /product="Putative secreted protein" FT /note="Possible secreted protein. No database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKE8" FT /protein_id="CAE48588.1" FT /translation="MRGRKRKVRLSGVMTLTMFLKSAADYFVYFHTHFISTKIRSFFAA FT VATVFSALVFSCPLASAASDAIPEDATSRVVVEPGESFTFTFDDETSNDGVFTRSVNAV FT AFTGTFAAPQAEAGGIISYGLHVRCTGTGFLPLSAKI" FT misc_feature 70504..70689 FT /note="Signal peptide predicted for DIP0082 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.436 between residues 62 and 63" FT CDS 70997..71137 FT /transl_table=11 FT /locus_tag="DIP0083" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKE7" FT /protein_id="CAE48589.1" FT /translation="MATDLSVEKQSVGQLLPVMITEFLERFLQDRIMALASLEKSIFRA FT M" FT CDS 71572..71700 FT /transl_table=11 FT /locus_tag="DIP0084" FT /product="Putative membrane protein" FT /note="Doubtful CDS. Possible membrane protein. No database FT matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKE6" FT /protein_id="CAE48590.1" FT /translation="MVTLAVVVPVTVFVLRFLMKAMKAMDIMIENNKWDGASSDEK" FT misc_feature 71575..71628 FT /note="1 probable transmembrane helix predicted for DIP0084 FT by TMHMM2.0" FT CDS complement(71845..72360) FT /transl_table=11 FT /locus_tag="DIP0085" FT /product="Putative membrane protein" FT /note="Weakly similar to Euhadra herklotsi NADH FT dehydrogenase subunit 1 TR:O21342 (EMBL:Z71695) (296 aa) FT fasta scores: E(): 0.57, 24.16% id in 120 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKE5" FT /protein_id="CAE48591.1" FT /translation="MNSQIKERFYDFAISNGNHYPRWRNPQSTHLLITGYFVSLVLALI FT FELLMFAWIHFIWLFIACMFIAMTCWTILRSTIDLKDMAPEDRLDDYEKAVINQWRQRS FT LSTALSLLFIGGLAAIIASASFIATDSPLSPNLLAIFAGLYMIYTYIFASSLPAVGYAL FT TFNRNPEE" FT misc_feature complement(order(71884..71949,71980..72045,72139..72189, FT 72202..72267)) FT /note="4 probable transmembrane helices predicted for FT DIP0085 by TMHMM2.0" FT CDS complement(72365..72664) FT /transl_table=11 FT /locus_tag="DIP0086" FT /product="Putative regulatory protein" FT /note="Similar to Deinococcus radiodurans transcriptional FT regulator, HTH_3 family DR2259 TR:Q9RS68 (EMBL:AE002058) FT (82 aa) fasta scores: E(): 1.3e-10, 47.67% id in 86 aa" FT /db_xref="GOA:Q6NKE4" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q6NKE4" FT /protein_id="CAE48592.1" FT /translation="MTIYYVYTTLYCMSPKKKLERTIYNRIRVLRTERDMSRAQLAELV FT DVNPQTIGALERGDHSPSLDLALRICDVFNLPIEAIFSRIPFTPLTAASLTQGA" FT misc_feature complement(72422..72586) FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT misc_feature complement(72422..72589) FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature complement(72494..72559) FT /note="Predicted helix-turn-helix motif with score 1845 FT (+5.47 SD) at aa 36-57, sequence MSRAQLAELVDVNPQTIGALER" FT CDS complement(join(72678..73145,73171..73497)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0087" FT /product="Putative antibiotic production protein FT (pseudogene)" FT /note="Pseudogene. Similar to Pseudomonas chlororaphis FT phenazine biosynthesis protein PhzF or PhzC SW:PHZF_PSECL FT (Q51520) (278 aa) fasta scores: E(): 1.1e-11, 32.92% id in FT 246 aa, and to Pseudomonas fluorescens phenazine FT biosynthesis protein PhzF SW:PHZF_PSEFL (Q51792) (278 aa) FT fasta scores: E(): 1.8e-11, 32.38% id in 247 aa. Presents a FT frameshift at residue 109" FT /db_xref="PSEUDO:CAE48593.1" FT CDS complement(73648..74943) FT /transl_table=11 FT /locus_tag="DIP0089" FT /product="Putative membrane protein" FT /note="Weakly similar in its N-terminal region to Bacillus FT subtilis SpaE TR:O52853 (EMBL:U09819) (251 aa) fasta FT scores: E(): 0.0095, 21% id in 200 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKE3" FT /protein_id="CAE48594.1" FT /translation="MWQSMYATGIAAPLTAMFAASAELREHHARMGGRHWRGLSMRSLR FT LARFVAVIACVAVFHVLNFGGTWLLALLDGRTGANRILLLGVLSWVGAIGVAGLAMACA FT RSTNIVITLVVFLVWQLAGTTRPIVEGSVWWAFPFAWPVRLVLPVLQVHQNAVPLEPDA FT ALRHESPWLALLLCLVLAVAGAIIAVVTPRYCIAFRRAHQHVSTAVLREASTRRPADRP FT RNVLPALLPVALTPAVRSCIILCTILILCVAMIYPPSYVHGLFTFAILPIGAGILPALI FT WPTTAPAWNIMRIENPHCTPTLLSIHALCVSAMSAIAALAGLISGSPLSTELTRLTLAI FT PVGCMLTMIALLIVTRFGTTTTIIWAVIWTIISATLGGDVLADTPLWLLAAAAWPEIAH FT GPRWLVAFSIAAITCAALYPLCARTLRTHRSE" FT misc_feature complement(order(73678..73734,73795..73860,73882..73938, FT 73969..74034,74098..74163,74176..74268,74374..74430, FT 74557..74613,74635..74700,74731..74796)) FT /note="10 probable transmembrane helices predicted for FT DIP0089 by TMHMM2.0" FT CDS complement(75080..75781) FT /transl_table=11 FT /locus_tag="DIP0090" FT /product="ABC transport system ATP-binding protein" FT /note="Similar to Lactococcus lactis NisF TR:Q48597 FT (EMBL:U17255) (225 aa) fasta scores: E(): 1.3e-25, 43.8% id FT in 226 aa, and to Staphylococcus epidermidis putative ABC FT transporter subunit EpiF TR:Q54002 (EMBL:U77778) (231 aa) FT fasta scores: E(): 7.1e-21, 38.15% id in 228 aa" FT /db_xref="GOA:Q6NKE2" FT /db_xref="InterPro:IPR003439" FT /db_xref="UniProtKB/TrEMBL:Q6NKE2" FT /protein_id="CAE48595.1" FT /translation="MSTTIRVNEVSKSFHGQHVLNNVSCDIRPGEVHALLGRNGAGKST FT LFSILLGLIPADSGEVTIDISQVGASIDGPAFYGHLSARSNVRVHSTLLGLPDSEADRV FT LDVVGLSDVGSKKARSFSTGMKARLALAQAILGDPDILILDEPQNGLDPQGIRDLRALL FT RAWAASGKTVLVSSHQLGEVTQLADTVTILAEGTIRYSGPLNQLAPQGQLEQEFFRLTQ FT PGVLEAGDHHE" FT misc_feature complement(75170..75697) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(75194..75694) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(75206..75421) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(75266..75289) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(75611..75688) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(75650..75673) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(75820..76479) FT /transl_table=11 FT /locus_tag="DIP0091" FT /product="Putative two-component system response regulator" FT /note="Similar to Streptomyces lividans response regulator FT homolog TR:P72471 (EMBL:U63847) (225 aa) fasta scores: E(): FT 2.7e-29, 42.98% id in 221 aa, and to Streptomyces FT coelicolor putative two-component system regulator FT SCH10.18c TR:Q9X8Q7 (EMBL:AL049754) (228 aa) fasta scores: FT E(): 3e-26, 38.53% id in 218 aa" FT /db_xref="GOA:Q6NKE1" FT /db_xref="HSSP:1A04" FT /db_xref="InterPro:IPR000792" FT /db_xref="UniProtKB/TrEMBL:Q6NKE1" FT /protein_id="CAE48596.1" FT /translation="MIRIVLADDQPPILKAFSTIIHSRDTMRVVATAANGAEAINACMS FT HNVDVVVMDIRMPVMDGITAARAILARHPRIRIVMLTTFDDPTLVREALTAGVHGFLLK FT DADPEIFLTAIEAIHSGESVLASGVTKQVIDTFRHAYGSDLSPEQRQGLSLITRREMDV FT LLCVAQGLTNAEISADLGIAETTVKTHITALLAKVHARDRVALVLFVHKAGLLLPR" FT misc_feature complement(75826..76023) FT /note="HMMPfam hit to PF00196, Bacterial regulatory FT proteins, luxR family" FT misc_feature complement(75850..76023) FT /note="HMMSmart hit to SM00421, helix_turn_helix, Lux FT Regulon" FT misc_feature complement(75862..76014) FT /note="ProfileScan hit to PS50043, Helix-turn-helix domain, FT luxR and related types (substantial overlap with lysR FT type)." FT misc_feature complement(75886..75924) FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature complement(75889..75972) FT /note="ScanRegExp hit to PS00622, Bacterial regulatory FT proteins, luxR family signature." FT misc_feature complement(75922..75972) FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature complement(75970..76014) FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature complement(76111..76476) FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature complement(76123..76473) FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature complement(76135..76476) FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT CDS complement(76479..77708) FT /transl_table=11 FT /locus_tag="DIP0092" FT /product="Putative two component system sensor kinase" FT /note="Similar to Streptomyces coelicolor putative two FT component sensor kinase SC5F7.35c TR:Q9S2S0 (EMBL:AL096872) FT (416 aa) fasta scores: E(): 2.9e-17, 32.79% id in 308 aa, FT and to Streptomyces coelicolor putative two-component FT system sensor kinase SCH10.17c TR:Q9X8Q6 (EMBL:AL049754) FT (472 aa) fasta scores: E(): 1.1e-11, 33.61% id in 241 aa" FT /db_xref="GOA:Q6NKE0" FT /db_xref="InterPro:IPR003594" FT /db_xref="UniProtKB/TrEMBL:Q6NKE0" FT /protein_id="CAE48597.1" FT /translation="MPNLIFSYISHLRKRRAPQKDLARTTHHTTTIATMARLGDKILTA FT TATIITAGYLFFATQTPSAHNTAHAAISILFLPFIWHWRSRPKLSSAGFVTLLGAWAAV FT WCHALPENMGITPWAVLAPMAVYAPARYLPQRNWGRIILLLTLAGSFVSPAMWRLDSHL FT LLHYREGMELVLAIGFHWALLGCVYAVGARYFLADQARETAYQSAREEEKLLIARELHD FT VLAHSLTLIKVQAQAGLYGGDQREALEEILNAAATSLEEVRGIVQALRDPTQSGAMQPL FT CQLADLAEIIASFERAGLNISAHLPQHCPPVPTLVQLAGVRIVSEALTNVVKHQGVGST FT VQLSVQVDEQLQITVDSQATAPTGASTSPGSGLLGLNERATALGGRFSAQGTASDFHVC FT ATIPMHQEDH" FT misc_feature complement(order(77121..77186,77232..77297,77319..77369, FT 77382..77438,77460..77510,77526..77582)) FT /note="6 probable transmembrane helices predicted for FT DIP0092 by TMHMM2.0" FT misc_feature complement(77472..77504) FT /note="ScanRegExp hit to PS00133, Zinc carboxypeptidases, FT zinc-binding region 2 signature." FT CDS complement(77804..78145) FT /transl_table=11 FT /locus_tag="DIP0093" FT /product="Putative membrane protein" FT /note="Probable membrane protein. No database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKD9" FT /protein_id="CAE48598.1" FT /translation="MIIPVAVMQCVAVAIVNVINVVVVRNCYVTATWAMLMLMVGVGVM FT LGGFTLIPVAVMFAVQVAVVNIVNMVAVRNCHMATVRAVLVGVVLVNYVGHDVETPLSR FT CEKLFFNKL" FT misc_feature complement(77852..78145) FT /note="ProfileScan hit to PS50326, Valine-rich region." FT misc_feature complement(order(77861..77911,77972..78037,78074..78130)) FT /note="3 probable transmembrane helices predicted for FT DIP0093 by TMHMM2.0" FT CDS complement(78214..78330) FT /transl_table=11 FT /locus_tag="DIP0094" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKD8" FT /protein_id="CAE48599.1" FT /translation="MYKIPRGDVGIVIQQSPTQHWPLNRVVIFQFLRFLESK" FT CDS complement(78414..79088) FT /transl_table=11 FT /gene="opuBB" FT /gene_synonym="proW" FT /locus_tag="DIP0095" FT /product="choline transport system permease protein" FT /note="Similar to Bacillus subtilis choline transport FT system permease protein OpuBB or ProW SW:OPBB_BACSU FT (Q45461) (217 aa) fasta scores: E(): 3e-14, 30.72% id in FT 192 aa, and to Mycobacterium tuberculosis putative FT transport system permease Rv3756c or MTV025.104c TR:O69722 FT (EMBL:AL022121) (239 aa) fasta scores: E(): 1.9e-28, 48.32% FT id in 209 aa" FT /db_xref="GOA:Q6NKD7" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6NKD7" FT /protein_id="CAE48600.1" FT /translation="MTWFGDLLSYLTTAAHWWGSQGFLARLLEHVGISLAAVAIAALLA FT LPAGVLIGHTGRGAGLVGGVSGAARALPTLGLLTIFGLAFGIGLTAPMLALIILAIPSL FT LAGAYSGVAAVDRATIDAAYAMGFTHRQVISSIELPLSAAVLVGGIRAAVLQVTATATL FT AAYTADVGLGRFIFHGLKTRDYIEMLAASVLVIALALLFDALLGGAQKLISQRTRTATP FT AP" FT misc_feature complement(order(78465..78530,78624..78689,78750..78815, FT 78846..78911,78933..78998)) FT /note="5 probable transmembrane helices predicted for FT DIP0095 by TMHMM2.0" FT misc_feature complement(78546..78758) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT CDS complement(79095..79736) FT /transl_table=11 FT /gene="opuBD" FT /gene_synonym="proZ" FT /locus_tag="DIP0096" FT /product="choline transport system permease protein" FT /note="Similar to Bacillus subtilis choline transport FT system permease protein OpuBD or ProZ SW:OPBD_BACSU FT (P39775) (226 aa) fasta scores: E(): 8.5e-13, 29.44% id in FT 197 aa, and to Mycobacterium tuberculosis transport system FT permease Rv3757c or MTV025.105c TR:O69723 (EMBL:AL022121) FT (229 aa) fasta scores: E(): 4.7e-25, 39.71% id in 209 aa" FT /db_xref="GOA:Q6NKD6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:Q6NKD6" FT /protein_id="CAE48601.1" FT /translation="MWLMHAWPEVLDLLRAHVLLSVPAIVISVLVAVPVGLFAARHPRV FT GNTVVQVTSLAYTIPALPMLVIVPFIVAVPLRSQINVIIALCVYGIALIVRTATDAFRS FT VPEEVRTAAVAQGMSPSQIAWKVDMPLAIPVLISGLRVLCVSTVGLVTIGALIGVSSLG FT SLFTDGFQRNITAEVVVGIVAVVLLAVLFDVACLILQRLCTPWTRPGKAR" FT misc_feature complement(order(79140..79205,79266..79331,79452..79502, FT 79515..79580,79617..79682)) FT /note="5 probable transmembrane helices predicted for FT DIP0096 by TMHMM2.0" FT misc_feature complement(79224..79436) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT CDS complement(79727..80557) FT /transl_table=11 FT /gene="opuBA" FT /gene_synonym="proV" FT /locus_tag="DIP0097" FT /product="choline transport system ATP-binding protein" FT /note="Similar to Bacillus subtilis choline transport FT ATP-binding protein OpuBA or ProV SW:OPBA_BACSU (Q45460) FT (381 aa) fasta scores: E(): 2.5e-42, 50.58% id in 255 aa, FT and to Mycobacterium tuberculosis putative ABC transporter FT ATP-binding protein Rv3758c or MTV025.106c TR:O69724 FT (EMBL:AL022121) (376 aa) fasta scores: E(): 1.3e-42, 53.62% FT id in 248 aa" FT /db_xref="GOA:Q6NKD5" FT /db_xref="HSSP:1B0U" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NKD5" FT /protein_id="CAE48602.1" FT /translation="MIEFESVSKRYGKRGEKAVADFSLFIPKGKTTVLVGSSGSGKTTL FT LRMINRMVEPTEGRVIVRGKDVAETDPVQLRRSIGYVIQSAGLLPHRTVIQNIALVPTL FT NKEPKAEIERRAKQALADVNLEPSLANRYPGELSGGQQQRVGVARALASDPDILLMDEP FT FGAVDPIVRRSLQKQLIDLQSRLHKTVVMVTHDIDEAFCVGDHIVVLEKGGKIAQQGSP FT AHIFAHPANDFVASFLGSDQENRSLHTELIDGHTVVVDTFGRPLGTLGDGATCG" FT misc_feature complement(79916..80476) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(79919..80473) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(79931..80149) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(80105..80149) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(80390..80467) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(80429..80452) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(80567..81175) FT /transl_table=11 FT /locus_tag="DIP0098" FT /product="Putative membrane protein" FT /note="Weakly similar to Mycobacterium tuberculosis FT hypothetical 23.9 kDa protein Rv0444c or MTV037.08C FT TR:O53729 (EMBL:AL021932) (232 aa) fasta scores: E(): FT 0.004, 25.94% id in 212 aa" FT /db_xref="GOA:Q6NKD4" FT /db_xref="InterPro:IPR018764" FT /db_xref="UniProtKB/TrEMBL:Q6NKD4" FT /protein_id="CAE48603.1" FT /translation="MSNNFPRDIEDALNVSPAPLTPPPALKLSVMDTIAATPQEQPAQP FT EPEQLATVTPLRRRRPGLVFASMAASVVLLAGAVTAVYQPWQAADPHAQMDSILAASDV FT RQADASAMGATLDIVVSQSMNSGGAMVDGAPAVGHGMGAQVWAVKTDGSMESAGVIGPE FT EHTDVWMPLPGDTHKVMITEEPMAGSTSPRGKVLAEVVV" FT misc_feature complement(80927..80992) FT /note="1 probable transmembrane helix predicted for DIP0098 FT by TMHMM2.0" FT CDS complement(81172..81756) FT /transl_table=11 FT /locus_tag="DIP0099" FT /product="Putative RNA polymerase sigma factor" FT /note="Similar to Streptomyces coelicolor putative RNA FT polymerase sigma factor SCI11.12c TR:Q9S2A7 (EMBL:AL096849) FT (185 aa) fasta scores: E(): 2.8e-25, 47.36% id in 171 aa, FT and to Bacillus subtilis RNA polymerase sigma factor SigW FT SW:SIGW_BACSU (Q45585) (187 aa) fasta scores: E(): 3.9e-10, FT 31.39% id in 172 aa" FT /db_xref="GOA:Q6NKD3" FT /db_xref="InterPro:IPR007627" FT /db_xref="UniProtKB/TrEMBL:Q6NKD3" FT /protein_id="CAE48604.1" FT /translation="MTAVELLVMDPDDLLVAVASGDQAAFAQLYDQLAPYVLGLSTQVI FT HDRAQAEEVTQEVFVEVWRTAPSFDASRGSARSWILRLARSRAIDRVRSDIASKKRDTT FT DFLHSATTWCAAEEEAVESLESQQVRALVDSIGEPHRTAIMLSYFQGLTHSEIAEATGV FT PLGTAKTRLRDGLKKLRQIVHPHLSATGAAR" FT misc_feature complement(81238..81303) FT /note="Predicted helix-turn-helix motif with score 1081 FT (+2.87 SD) at aa 152-173, sequence LTHSEIAEATGVPLGTAKTRLR" FT misc_feature complement(81472..81642) FT /note="HMMPfam hit to PF00776, Sigma-70 factor (ECF FT subfamily)" FT CDS complement(81783..82181) FT /transl_table=11 FT /locus_tag="DIP0100" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKD2" FT /protein_id="CAE48605.1" FT /translation="MDCSQCEKTFFTQPQSVSHRSSEYPYETHREHSWCQPSSKQVIVK FT HKEYSLMRMTTKAALTMMFAAGAFGLAACGDNGTSEKMTSETSTHMSSEKMTPESDKMM FT ESDKMEHDKMDGKMDHDKMTHESDAMQK" FT CDS 82259..83899 FT /transl_table=11 FT /locus_tag="DIP0101" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis DipZ protein FT Rv2874 or MT2942 or MTCY274.05 SW:DIPZ_MYCTU (Q10801) (695 FT aa) fasta scores: E(): 1.6e-43, 43.65% id in 591 aa" FT /db_xref="GOA:Q6NKD1" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/TrEMBL:Q6NKD1" FT /protein_id="CAE48606.1" FT /translation="MFELATIGLIGGIVTGISPCILPVLPVVLAVSVGRRPTHVVAGLA FT LSFATITLLGTVILSSLGLPKDVLRWTGIGLLVIVGLSMMIPKLGELVEEPFSRIPRPT FT FLQQKARDKGGFMIGLALGAVYVPCAGPILAAITVAGATGDIGWPTVVLTVAFAVGASL FT PLLVFALAGNKMGEKIDAIRKHMKLVGAVILALALAMALNIPERVQRAIPDWTAGVQKQ FT ISENDTVRGALSSGGGSLAACRDADPSMLHDCGEAPEFEGLTGWFNTDKPVSTHSGQVT FT LVDFWAYACINCQRAGEHITKLYDAYRDAGLQVVGVHAPEYGFEHELANVKDAAKREGI FT NYPVAQDNDFVTWKKYNNRYWPARYLIDAQGNVRHIHEGEGAYKETEQLVRELLREANP FT QVSLPEPVEKGVEKHDAQLTQRRNPETYLGYERARYFTNSNYGPGERTLEFNAPKVGQY FT TLSGTWEIASDHINPVKDAALSVNIHAATVQTVVSGTGTLEVTYPDGHTKEFKVADGTV FT NVVEQDEPLDGIVTVKPSQGVSFYSLTFG" FT misc_feature 82259..82348 FT /note="Signal peptide predicted for DIP0101 by SignalP 2.0 FT HMM (Signal peptide probability 0.826) with cleavage site FT probability 0.363 between residues 30 and 31" FT misc_feature 82280..82864 FT /note="HMMPfam hit to PF02683, Cytochrome C biogenesis FT protein transmembrane region" FT misc_feature order(82286..82354,82373..82441,82469..82537,82598..82666, FT 82694..82762,82820..82873) FT /note="6 probable transmembrane helices predicted for FT DIP0101 by TMHMM2.0" FT misc_feature 83060..83434 FT /note="ProfileScan hit to PS50223, Thioredoxin-domain (does FT not find all)." FT CDS complement(83969..84745) FT /transl_table=11 FT /gene="tipA" FT /locus_tag="DIP0102" FT /product="transcriptional activator" FT /note="Similar to Streptomyces coelicolor transcriptional FT activator TipA or SCE9.20 SW:TIPA_STRCO (P32184) (253 aa) FT fasta scores: E(): 5.3e-24, 35.85% id in 251 aa" FT /db_xref="GOA:Q6NKD0" FT /db_xref="InterPro:IPR000551" FT /db_xref="UniProtKB/TrEMBL:Q6NKD0" FT /protein_id="CAE48607.1" FT /translation="MVTPMEEHNLRTVGEVADLVGVSVRTLHHWDDIGLVSPQWRSWAD FT YRLYSEEDVAQIYQVLLYRETGMPLKTIRDMLEGNSSPADHLQRQLELLQQRKHRVTSM FT IESVHQLLEDTMNHNEPLSADHTAKVLGREWSKWEKEAEERWGDTEDWAIFQQRAAQMG FT KDDFAARQMVMHKLDQRLAQAFESGMAPDSPDAHALAEEHRACLSQWFPVSHSKHALIA FT QGYTADPRFTAHYDKYAKGLAVWLEKAIQSNAQRHT" FT misc_feature complement(84506..84712) FT /note="HMMSmart hit to SM00422, helix_turn_helix, mercury FT resistance" FT misc_feature complement(84545..84607) FT /note="FPrintScan hit to PR00040, MerR bacterial regulatory FT protein HTH signature" FT misc_feature complement(84599..84706) FT /note="HMMPfam hit to PF00376, Bacterial regulatory FT proteins, merR family" FT misc_feature complement(84638..84679) FT /note="FPrintScan hit to PR00040, MerR bacterial regulatory FT protein HTH signature" FT misc_feature complement(84638..84706) FT /note="ScanRegExp hit to PS00552, Bacterial regulatory FT proteins, merR family signature." FT misc_feature complement(84650..84715) FT /note="Predicted helix-turn-helix motif with score 1580 FT (+4.57 SD) at aa 11-32, sequence RTVGEVADLVGVSVRTLHHWDD" FT misc_feature complement(84677..84712) FT /note="FPrintScan hit to PR00040, MerR bacterial regulatory FT protein HTH signature" FT CDS complement(84797..84964) FT /transl_table=11 FT /locus_tag="DIP0103" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML2114 TR:Q9CBE3 (EMBL:AL583924) (56 aa) fasta scores: E(): FT 1.7e-05, 52.08% id in 48 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKC9" FT /protein_id="CAE48608.1" FT /translation="MDILNKAKDLINNNSDKVKEAVDKAGDFIDSKTEGKYADKVDQVQ FT EAVKKKIDEQ" FT CDS complement(84975..86321) FT /transl_table=11 FT /locus_tag="DIP0104" FT /product="Putative peptidase" FT /note="Similar to Streptomyces coelicolor putative FT peptidase SCI52.18c TR:Q9AD91 (EMBL:AL590507) (445 aa) FT fasta scores: E(): 1e-31, 32.04% id in 440 aa" FT /db_xref="GOA:Q6NKC8" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q6NKC8" FT /protein_id="CAE48609.1" FT /translation="MSITPIALNVVHMTLYDDTLALLTELIRNACVNDLTPDSGHEERN FT AATLEEFFAGSPVNIQRFEPHPGRVSLVVTVAGSDLAAEPLTFLGHTDVVPVDTQHWSV FT PPFDATIIDGKLYGRGSVDMLFITATMAAVTRHVARTGGNAGTLYFTALADEEARGGLG FT AAWLAQHHPDALSWKNCISETGGSHIPGRDDSDSTIIYVGEKGAAQRRLHVYGDAGHGS FT APYNKDSAIATIGEVARRIAAFEPEVSTDDIWHGFIDAFRFDPTTTAALRDGTGYEHLG FT DLAAFGHAISHLTIAQTVLRAGQAINVLPSHAWLDMDIRTLPGHDDAYVDDLLTQVLGD FT LAPHVTIEHLICEPATISPTDTPLYRTLAEVLHDSFPDTTVIPMIAPGGSDLRFARRMG FT GNGYGFAVHAPDRTLGHVHGQLHSHDEYLHLEDLRLTVAGYQQLVEKFL" FT misc_feature complement(85158..86255) FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40" FT CDS 86342..87394 FT /transl_table=11 FT /gene="bioB" FT /locus_tag="DIP0105" FT /product="biotin synthase" FT /EC_number="2.8.1.6" FT /note="Similar to Corynebacterium glutamicum biotin FT synthase BioB SW:BIOB_CORGL (P46396) (334 aa) fasta scores: FT E(): 2.7e-103, 80.18% id in 328 aa" FT /db_xref="GOA:Q6NKC7" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/Swiss-Prot:Q6NKC7" FT /protein_id="CAE48610.1" FT /translation="MIIARIFGHLPIATTWEHHVTDILELARTKVLNNGEGLNKEEVLQ FT VLQLDEARIPELLELAHEVRLKWCGEEVEVEGIISLKTGGCPEDCHFCSQSGLFESPVR FT SAWLDIAGLVEAAKQTQKSGATEFCIVAAVKGPDERLMSQLEEAVAAIKSEVDIEVAAS FT IGILTQEQVDRLKAAGVHRYNHNLETARSYFPNVVTTHSWESRRETLRMVGEAGMEVCS FT GGIIGMGETLEQRAEFACDLAELNPTEVPMNFLDPRPGTPFADYEVLDTTDALRAIGAF FT RLALPKTILRFAGGRELTLGDLGTEQGLLGGINAVIVGNYLTTLGRPMEQDLDMLGKLR FT LPIKALNASV" FT misc_feature 86447..87367 FT /note="HMMPfam hit to PF01792, Biotin synthase" FT CDS 87394..87654 FT /transl_table=11 FT /locus_tag="DIP0106" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 8.6 kDa protein Rv1590 or MT1625 or MTCY336.14c TR:O06600 FT (EMBL:Z95586) (79 aa) fasta scores: E(): 4.1e-11, 67.24% id FT in 58 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKC6" FT /protein_id="CAE48611.1" FT /translation="MATHAQSTELLEALLAGEAPRFQPNTGQELVDDIEIALSPSARAG FT LEAPRFCQICGRRMIVQVRPDGWEATCSRHGSVDSAYLGRR" FT repeat_region 87565..87840 FT /note="repX" FT stem_loop 87688..87749 FT /note="Score 50: 18/19 (94%) matches, 0 gaps" FT misc_feature 87984..92600 FT /note="Anomalous G+C content (56.29%). DtxR-regulated FT operon siderophore-dependent iron uptake system. Not FT present in C.glutamicum" FT misc_feature 87987..88006 FT /note="DtxR-regulated promoter/operator" FT CDS 88041..89228 FT /transl_table=11 FT /gene="irp6A" FT /locus_tag="DIP0108" FT /product="Ferrisiderophore receptor Irp6A" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae ferrisiderophore receptor Irp6A FT SWALL:Q8VVA8 (EMBL:AY061890) (395 aa) fasta scores: E(): FT 8.7e-146, 97.46% id in 395 aa" FT /db_xref="GOA:Q6NKC5" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:Q6NKC5" FT /protein_id="CAE48612.1" FT /translation="MRLSRKITAVAVAIAASGAALTACSNTSDTATDASATGSSAALTV FT TDVAGRTVEFDKQPERVLLGEGRAMFAASILDKENPGEHIVALGEDLHQGAPSFEAKLF FT EAHPEIKDIPVIGHIAKGNVSVENLLAFNPDVVVMTLDHKKAAEQNGFLAKMDQAGMKY FT VFTDFRQKPLENTTKSVEVLGAVLGEQDKAKEFNEFYTKKRDDIIARAKKLENKPRTLL FT WRAAGLKDCCNTVKNSNLGDLVNAAGGVNIGDTLIDTESGDLTAEKVIAEQPEKIIATG FT GAWAKDPKKPEVLPHVELGYTATDDVAERTLEGLLKTPGFSALEAPKKGDLHAVFHQFY FT DSPYNIFALEQFAQWLHPEEFKDLDAVKDFQEFHKKWMPFEFSGVFFVTDKVEAK" FT misc_feature 88281..89057 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein" FT CDS 89229..90272 FT /transl_table=11 FT /gene="irp6B" FT /locus_tag="DIP0109" FT /product="Membrane protein permease Irp6B" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae membrane protein permease Irp6B FT SWALL:Q8VVA7 (EMBL:AY061890) (347 aa) fasta scores: E(): FT 1e-116, 98.27% id in 347 aa and similar to Rhizobium FT meliloti putative iron ABC transporter permease protein FT SMB21430 TR:CAC49658 (EMBL:AL603646) (356 aa) fasta scores: FT E(): 1.6e-55, 50.87% id in 342 aa and to Corynebacterium FT diphtheriae HmuU SWALL:Q9XD88 (EMBL:AF109162) (350 aa) FT fasta scores: E(): 2.1e-36, 40.66% id in 332 aa" FT /db_xref="GOA:Q6NKC4" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:Q6NKC4" FT /protein_id="CAE48613.1" FT /translation="MSNVVEQYHKRSRRKLLAIVILTVLAIAAFVVATVVGPVNLTPAT FT MLKGIIQPDSVDPTTRTVLWNLRLPASVMAVLIGAALSLAGAHMQTILDNPLAEPFTLG FT ISAAAAFGGAASIVLGWVLIPHAQFNLAAVAWASSLVAVVIVAGASVWRGAGAESMILL FT GIALVFLFQALLSLMQYRATTEALQQIVFWTMGSLQRATWTANAIIAVMLAIAIPYTVV FT NAWRLTALRLGDARAAALGINVTRLRVVTLVVASLLAASAVAFAGIIGFIGLVGPHVAR FT ILVGEEQRFFAPASMAAGAFLLATAHAVSITMIPGVALPISIITALVGVPFFVILVFTR FT RRAMWGS" FT misc_feature 89229..89351 FT /note="Signal peptide predicted for DIP0109 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.560 between residues 41 and 42" FT misc_feature order(89274..89342,89421..89489,89526..89594,89622..89690, FT 89709..89777,89835..89903,89982..90050,90093..90161, FT 90174..90242) FT /note="9 probable transmembrane helices predicted for FT DIP0109 by TMHMM2.0" FT misc_feature 89337..90245 FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature 89688..89735 FT /note="ScanRegExp hit to PS00012, Phosphopantetheine FT attachment site." FT misc_feature 89847..90014 FT /note="ProfileScan hit to PS50281, Binding-system dependent FT bacterial transporters (araH, livH/limM families);" FT CDS 90274..91032 FT /transl_table=11 FT /gene="irp6C" FT /locus_tag="DIP0110" FT /product="ATP-binding protein Irp6C" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae ATP-binding protein Irp6C FT SWALL:Q8VVA6 (EMBL:AY061890) (252 aa) fasta scores: E(): FT 1.4e-79, 99.6% id in 252 aa and similar to Escherichia coli FT iron FecE or B4287 SWALL:FECE_ECOLI (SWALL:P15031) (255 aa) FT fasta scores: E(): 5.7e-19, 37.64% id in 263 aa" FT /db_xref="GOA:Q6NKC3" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NKC3" FT /protein_id="CAE48614.1" FT /translation="MSLSISDLRVSYGHGPRMRHILNGVSFGPVPLGTVTGLLGPNAAG FT KSTLIKAIAGLKATSGGTRTIMSKGAEVPHHELRNVVGYVPQDLLTSASLTAFESILVS FT ARKGYDPLLSSGAVMERLGITALADRYVSELSGGQRQLVAVAQMLVRQPEVLLLDEPTS FT ALDLRHQVELLKLLRAEVNSRDCLAVVALHDLNLAARYCDHLVVLSGGHVIAEGAPTQV FT LTSDLLEQVYGLRARVLDDAGVPVVCPVED" FT misc_feature 90367..90906 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 90370..90906 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 90376..90441 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 90391..90414 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 90676..90720 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 90676..90894 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 91122..92600 FT /transl_table=11 FT /locus_tag="DIP0111" FT /product="Putative lipoprotein" FT /note="Similar to Corynebacterium glutamicum ATCC 13032 FT hypothetical protein CGL1283 SWALL:BAB98676 (EMBL:AP005278) FT (581 aa) fasta scores: E(): 1.8e-63, 45.63% id in 504 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKC2" FT /protein_id="CAE48615.1" FT /translation="MRLLKPALVLAIVAGMTLSACGSDSATKDISVAGSELSLDKTALV FT ADSSGVEVSQAFFPDADKVDSVVVAGSTAQHRWEGAQEAIKRGVPLLVDDSSNTEAINA FT EIERLGVKDVVRIGDPAADAQQVAANAAAKKQHTEDVMARQITELSAEHGHLDGGAAVL FT VSKATSAASVATAKASGATVEYLSSGDPRESATLQKDAHAKVVGLGPSFSNQERFHRAV FT DMLQGPEVPGGGHLIFPEHRLVALYGHPSGGALGVMGEQPAPEAVAKVKELTEHYAAID FT PQTTTVPAFEIIATVASADPGPDGNYSNEVTIDELRPWVDEIGKAGGYAVLDLQPGSAN FT FLDQAKQFEELLKLPHVGLALDPEWRINPGEKPMERVGSVEAAEINSTAEWLAGLVRDN FT NLPQKPFVVHQFQWQMIRDREQLNTTAPELAWILHADGHGPARDKFATWEMVQQDLQPE FT FTMAWKNFIDEDTPMFTPEQTMDIYPRPGFVSYQ" FT misc_feature 91122..91196 FT /note="Signal peptide predicted for DIP0111 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.257 between residues 25 and 26" FT misc_feature 91122..91337 FT /note="ScanRegExp hit to PS00430, TonB-dependent receptor FT proteins signature 1." FT CDS 92618..93025 FT /transl_table=11 FT /locus_tag="DIP0112" FT /product="Conserved hypothetical protein" FT /note="Similar to Bacillus subtilis YdhG protein TR:O05499 FT (EMBL:D88802) (135 aa) fasta scores: E(): 2.3e-20, 41.46% FT id in 123 aa" FT /db_xref="InterPro:IPR014922" FT /db_xref="UniProtKB/TrEMBL:Q6NKC1" FT /protein_id="CAE48616.1" FT /translation="MATRIAEPGEPIIEFFADWLDGISNPTNRAIAERILAWVHEEFPD FT LGYRFAWKQPMFTHHGTFIIGFSPATNHISFAPERAGIVKWEPQLKQRGLSYGKMMVRL FT PWDQPIPFDLLRDVIAFNIDDKRDVTSFWRK" FT CDS 93040..94380 FT /transl_table=11 FT /locus_tag="DIP0113" FT /product="Putative riboflavin biosynthesis protein" FT /note="Similar to Streptomyces griseus FT deoxyribodipyrimidine photolyase Phr SW:PHR_STRGR (P12768) FT (455 aa) fasta scores: E(): 3.5e-36, 36.75% id in 468 aa, FT and to Escherichia coli deoxyribodipyrimidine photolyase FT PhrB or Phr or B0708 SW:PHR_ECOLI (P00914) (472 aa) fasta FT scores: E(): 9.9e-32, 34.01% id in 488 aa" FT /db_xref="GOA:Q6NKC0" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:Q6NKC0" FT /protein_id="CAE48617.1" FT /translation="MARSVVVWFRDDLRVHDNPALMKAWELVRANPADLHAVYIANEVG FT VRPLGGAVKWWLHHSLLALSEQLAQRGVRLHVLSGDPLTLLPQLVTSCGATAVTMNRRY FT DPAARSIDDAFVADASAHDVEVYDFPCHLLAEPGEITTTTGGSYKVFTPFSRNLRDAIG FT DLPLDTLAAPPKAEQPIDDTETQAAIADLGWDAWWAASISKAWTPGEPAAREALAELDD FT ILPRYLDDRDRPDIDGTSRLSPRLRFGELSVAEVWNHAHTSEGFRRQLMWRDFAWHRLD FT AHPDMATANIRPEFDHFPWDGGDFEAELNAWRHGRTGIALVDAGMRELWATGTMHNRVR FT MVAASLLVKNLGIHWRHGEQWFWDTLVDADPASNPFNWQWVAGSGDDAAPYFRIFNPDT FT QARRFDPDGTYRTRWLPIMSADYPEEAIVDLKESRLRALDAYNACKR" FT misc_feature 93052..94287 FT /note="HMMPfam hit to PF00875, DNA photolyase" FT misc_feature 93466..93516 FT /note="FPrintScan hit to PR00147, DNA photolyase signature" FT misc_feature 93871..94287 FT /note="BlastProDom hit to PD004390, PD004390" FT misc_feature 93988..94038 FT /note="FPrintScan hit to PR00147, DNA photolyase signature" FT misc_feature 94048..94104 FT /note="FPrintScan hit to PR00147, DNA photolyase signature" FT misc_feature 94165..94209 FT /note="FPrintScan hit to PR00147, DNA photolyase signature" FT CDS 94403..94822 FT /transl_table=11 FT /locus_tag="DIP0114" FT /product="Putative membrane protein" FT /note="Similar to Staphylococcus aureus subsp aureus N315 FT hypothetical protein SA2163 TR:Q99RQ4 (EMBL:AP003137) (143 FT aa) fasta scores: E(): 2.4e-15, 39.16% id in 143 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKB9" FT /protein_id="CAE48618.1" FT /translation="MRKLYYASLTYLILGLVAGVFYREWTKVFNAVDRSQLNTLHTHLL FT VLGTFFFLIVLALDKMFHLSGQKKFQQWFIFHNVALAWTTLAMLANGIVATSGGMWGPA FT QSGIAGMGHILLTGGFIWFFSMLNTAIKRSEANQK" FT misc_feature order(94415..94468,94511..94579,94616..94684,94727..94795) FT /note="4 probable transmembrane helices predicted for FT DIP0114 by TMHMM2.0" FT CDS complement(94809..95876) FT /transl_table=11 FT /locus_tag="DIP0115" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 39.2 FT kDa protein SCH24.21c TR:Q9X8T5 (EMBL:AL049826) (360 aa) FT fasta scores: E(): 5e-111, 79.49% id in 356 aa" FT /db_xref="GOA:Q6NKB8" FT /db_xref="InterPro:IPR017815" FT /db_xref="UniProtKB/TrEMBL:Q6NKB8" FT /protein_id="CAE48619.1" FT /translation="MSAIRVAIAGVGNCASSLVQGVEYYKDASPDQQVPGLMHVQFGDY FT HVGDIEFVAAFDVDRAKVGLDLSEAINASENCTIRICDVPETGVTVQRGPTLDGLGKYY FT RATVEESPAQAVDVVQVLKDERVDVLVSYLPVGSEEADKFYAQCAIDANVAFVNALPVF FT IASDPQWAAKFEEAGVPIVGDDIKSQVGATITHRVLAKLFEDRGVHLDRTMQLNVGGNM FT DFKNMLERERLESKKISKTQAVTSNLDQEIAARDVHIGPSDYVGWLDDRKWAYVRLEGT FT AFGDVPLNLEYKLEVWDSPNSAGIIIDALRAAKIAKDRGIGGPVYPAAAYLMKSPPRQM FT RDEAARAELEQFISG" FT misc_feature complement(94812..95867) FT /note="HMMPfam hit to PF01658, Myo-inositol-1-phosphate FT synthase" FT CDS complement(96123..96881) FT /transl_table=11 FT /locus_tag="DIP0116" FT /product="Putative membrane protein" FT /note="Similar to Rhizobium loti MLR6622 protein TR:Q988S0 FT (EMBL:AP003009) (231 aa) fasta scores: E(): 1.4e-25, 40.99% FT id in 222 aa" FT /db_xref="InterPro:IPR008217" FT /db_xref="UniProtKB/TrEMBL:Q6NKB7" FT /protein_id="CAE48620.1" FT /translation="MTQKNFPPLPGTLSSTGQAIDPVAVSGLNSKLNWLRAGILGANDG FT IVSISALLLGVIATNASTSTVLLSGVAATIAGAVSMALGEFVSVSAQRDNEHKVMEQEY FT NELLHAPGEERAEIAGILENYGMSTATAYRAAIEIGRNDPFRAHLQIEYGIDPHDLTSP FT LHAAVSSAASFLLGALLPLLTVFLIPDLSRVAGAIAVTAVTLLALAITGYVSAHIGGTS FT PVKSVLRLTIGGILGLALTFGAGYAFGAVA" FT misc_feature complement(order(96135..96200,96231..96296,96318..96383, FT 96618..96683,96705..96770)) FT /note="5 probable transmembrane helices predicted for FT DIP0116 by TMHMM2.0" FT CDS complement(96976..97758) FT /transl_table=11 FT /locus_tag="DIP0117" FT /product="Putative lipase" FT /note="Similar to Streptomyces coelicolor putative secreted FT lipase SCI11.24c TR:Q9S295 (EMBL:AL096849) (290 aa) fasta FT scores: E(): 6.8e-20, 33.18% id in 223 aa, and to FT Pseudomonas sp lipase precursor Lip SW:LIP_PSES5 (P25275) FT (364 aa) fasta scores: E(): 5.6e-05, 28.4% id in 176 aa" FT /db_xref="InterPro:IPR002918" FT /db_xref="UniProtKB/TrEMBL:Q6NKB6" FT /protein_id="CAE48621.1" FT /translation="MAVVQHHLPLSARLPARGIFEDDWRDRPSKRHPYPVILIHGTGVT FT KGDWMELGHALRSLGYAVWAPDFGMRSTAAVAESAAQVGAYIDAVLTVTKAKKAIVVGH FT SQGGILARYWMHNLDGANKVSHLISLAVPHHGTSHGGMMSPLGRTPRGTAVIDSLITGF FT FGASGFEMLHDSELIAQLNEHGDTLPYVYYSCIATRSDTIIQPVESCFLHGKLVRNIYA FT QAVSKHAIILHEDMPHDPRVRRLVIAEIERVERLTIPS" FT misc_feature complement(97021..97662) FT /note="HMMPfam hit to PF01674, Lipase (class 2)" FT misc_feature complement(97399..97659) FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT CDS 97855..98433 FT /transl_table=11 FT /locus_tag="DIP0118" FT /product="Putative dehydrogenase" FT /note="Similar to Thermus aquaticus NADH dehydrogenase Nox FT SW:NOX_THETH (Q60049) (205 aa) fasta scores: E(): 3.2e-07, FT 34.18% id in 196 aa" FT /db_xref="GOA:Q6NKB5" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:Q6NKB5" FT /protein_id="CAE48622.1" FT /translation="MSLTVAEAIAQRRAVRTYTDQPIPDDILDRVVAQALEAPTAFNAQ FT RADVVVVRDQAVKDALFAASKQAQLRDAPAVLVIVARADAPTDLPELLGPDRAAYANGF FT FARLDAAALRETALKDAMLVAGFALIAAQGEGLATSPTTGWDESQVLEAVGLGGRDDRA FT VGLVIAMGYPAEQPLHPGREASRRVNDHY" FT CDS complement(98438..100177) FT /transl_table=11 FT /locus_tag="DIP0119" FT /product="Conserved hypothetical protein" FT /note="Similar to Deinococcus radiodurans ATP-dependent DNA FT helicase RecG-related protein DR2199 TR:Q9RSC6 FT (EMBL:AE002053) (596 aa) fasta scores: E(): 8.9e-13, 24.04% FT id in 445 aa" FT /db_xref="GOA:Q6NKB4" FT /db_xref="InterPro:IPR007421" FT /db_xref="UniProtKB/TrEMBL:Q6NKB4" FT /protein_id="CAE48623.1" FT /translation="MFMEVSLTSLPAHVMNALDAIWEGSIADSLESETLEFKEDPSCAG FT RGKQHGNPQAALIEKLIDEAVCLANGDAGTGHIVVGIKDKIGGPEAFTGTTFDTEKIAK FT KIFDGTRPNLRPEVHEVRYQNNRLIVIYIPEALSLYSRSKGQTSKRVGSHCEPLSEEQR FT RAIAATRAHADYSNGISEFNVDDIAADTIQEVRRLLKTKRAQSGIDTSLPTTTNGLLRE FT LGLIDNYGALKRAGAILLLPAPEGQLSIRHFWRSFPGIDPEVTDYNQPLLIALSSLKRR FT ITENANKEIKRIQFSDGQEIAVSAFPQTAVDEVVTNAIIHRDWRLSRPVVIDQSPQTLK FT VWSPGSLPVGVTPNRLLTTQSIPRNSRLMSAMRMLGLAEESSRGFDRIWAALLGSGRDI FT PDVHTEDTFVEVILHSGNPDESFIKALHELSLSFNPDMLHSVNTLIVLWHLWTSPVISL FT KQARVKTQTSSKEATELMFALESNGLLTQIHNTDEWFLSEKARKTTNYYQSETIPQSSV FT QTWVEEKLSSGSPISAAEIAESIGMPRPEITEILRNLRRAGKAHIDPSGPQRGSGTRWI FT KGT" FT misc_feature complement(98522..98587) FT /note="Predicted helix-turn-helix motif with score 1072 FT (+2.84 SD) at aa 531-552, sequence ISAAEIAESIGMPRPEITEILR" FT repeat_region 100366..100422 FT /note="Possible inverted repeat" FT repeat_region complement(100367..100989) FT /note="repX" FT CDS join(<100495..100545,100547..>100591) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0120" FT /product="Putative transposon (pseudogene)" FT /note="Pseudogene. Highly similar to the N-terminal region FT of Corynebacterium xerosis and Corynebacterium striatum FT hypothetical 20.7 kDa protein TnpCX TR:Q46485 (EMBL:U21300) FT (190 aa) fasta scores: E(): 0.057, 63.41% id in 41 aa. FT Presents a frameshift at residue 17" FT CDS <100588..100722 FT /transl_table=11 FT /locus_tag="DIP0121" FT /product="Putative transposon (partial)" FT /note="Similar to parts of Mycobacterium smegmatis TnpA FT protein TR:Q50440 (EMBL:M76495) (413 aa) fasta scores: E(): FT 0.8, 44.44% id in 36 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKB3" FT /protein_id="CAE48625.1" FT /translation="MSALIDTLVGMKDAVVAEIVQLGRTMNKRRKGILAYIRHTINAL" FT repeat_region 100929..100985 FT /note="Possible inverted repeat" FT CDS 101238..101792 FT /transl_table=11 FT /locus_tag="DIP0122" FT /product="Putative siderophore binding protein" FT /note="Similar to Streptomyces coelicolor putative FT siderophore binding protein SCBAC36F5.26 TR:CAC42862 FT (EMBL:AL592292) (178 aa) fasta scores: E(): 6.3e-25, 48.48% FT id in 165 aa" FT /db_xref="GOA:Q6NKB2" FT /db_xref="InterPro:IPR001451" FT /db_xref="UniProtKB/TrEMBL:Q6NKB2" FT /protein_id="CAE48626.1" FT /translation="MTGPLILPFNGKVPRVHETAFIAPNATLIGDVTIGPYASVFYGCV FT LRADINSIVVGARTNIQDNSVLHVDRDAACVLGDDVTVGHMALVHGSTVGDGTLVGMHA FT ALLSRSVVGAGSLIAAGAVVLEGQVIPVKSLAAGVPAKVRRELSDEQSAGFIPHAGRYV FT EVAVQHGELGAPLSVEDVRFR" FT misc_feature 101292..101345 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature 101391..101444 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature 101508..101561 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature 101562..101615 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT CDS complement(101789..102787) FT /transl_table=11 FT /locus_tag="DIP0123" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 46.1 kDa protein Rv0485 or MT0503 or MTCY20G9.11 FT SW:Y485_MYCTU (Q11151) (438 aa) fasta scores: E(): 1.4e-12, FT 32.14% id in 224 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NKB1" FT /protein_id="CAE48627.1" FT /translation="MPNRRTLRNTPSFTKPTSPAASCLHLIRHLQPVTRATLVNGSGKS FT QPTVTRAVAALMEAHLVRERPDLSIPQGPGRPTIPIELAPSPWVHIGVAVGTRATYIGA FT YNTRGIALREKMIEIRPASTSIDTYIDAITTAITELTTLSELPLASIGISSSGRVSPTG FT LVTAANLGWDRLDIVSALYKRIPVPIAVTSVITAIAGAEQQAQDPNHPSTTLIFYADDS FT TGAALQTPDSITTVPIDTSSEDVALLSEAAVHLVAEHAPNSIVLAGSAFSNPDDARTVG FT KALRSSPTNPNIEIRVFPTHLDNARAAARAVALDHLIEDPLGLAKRILASC" FT CDS 103155..104525 FT /transl_table=11 FT /locus_tag="DIP0124" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCBAC19F3.14 TR:CAC44337 (EMBL:AL596102) FT (517 aa) fasta scores: E(): 3.6e-47, 37.96% id in 453 aa" FT /db_xref="InterPro:IPR005625" FT /db_xref="UniProtKB/TrEMBL:Q6NKB0" FT /protein_id="CAE48628.1" FT /translation="MVATYTPSAEKQEASTRALPRHLRRLHFFAGIICAPLIFIASLTG FT LGYAFGPSLDKAVYSEAINVTPSGDELPLERIVDIARATHPDLELAGVRVGNPDQATRV FT MFNDPTLPKSTTQAVFVNQYTGDITGDMPQYGGSAALPIRHWLSLGHRDLWLGEPGRLY FT SETAASWLGVLAVSGVYLWWKRQRKAGRLAAMLRIDGRGRTRNLRWHGAIGTLVAAGMI FT FLTITGLTWSSVAGDNIRSVRTALNWTTPSVSTALGAAAEQTPADPHAEHGGHSGHHAH FT MAALDVSEQAQRVATTAAGELRTPFTVKPPKEDGHAWTAAEDRVAYRLTYDALAVDGSN FT GQVTDRVDFEQWSLPTKLTAWLIELHMGTLLGVPNQIALGLLAIGLLILVVRGYLLWFQ FT RRGTAWVGSAPARSVDGVRGYGALGWIGVAAMVIYGVVAPLFGVTCVAFLICSMLKK" FT misc_feature order(103236..103304,103650..103703,103779..103847, FT 104280..104348,104409..104504) FT /note="5 probable transmembrane helices predicted for FT DIP0124 by TMHMM2.0" FT stem_loop 104526..104619 FT /note="Score 60: 20/20 (100%) matches, 0 gaps" FT CDS 104676..105761 FT /transl_table=11 FT /locus_tag="DIP0125" FT /product="Conserved hypothetical protein" FT /note="Similar to the C-terminal region of Pseudomonas FT aeruginosa hypothetical protein PA4923 SW:YDC3_PSEAE FT (P48636) (195 aa) fasta scores: E(): 3.3e-27, 44.97% id in FT 189 aa" FT /db_xref="GOA:Q6NKA9" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q6NKA9" FT /protein_id="CAE48629.1" FT /translation="MSFSPELPDFMQGLGVSVHAMTNADVPAHTDSVLRNLNRFEQHFT FT ADDLAVVPLSEYTFFNEGRGDIGIVVQDASGAVVGTMCVQFIKGLAYLNPAVPEMTLRL FT DEAWRGKGIGGWLIEQATEYGRLNGWPGIAVNVEKQSPARRLYARHDFAAQDREVEYGA FT IMLKTLSPKIRSVAVYCGSAVGERPEYAQAARELGTALAQRGITMVYGGGRPGLMGIAA FT DAAIAAGGKVHGVMPHALVDLEQAHPGLSALDITDTMAQRKTRMEELADAFVVLPGGMG FT TMEEMFQVLVRQQLGPYAGPVALMNIEEFWDPFIAALRTMSEEGFISERYIDALVMAKD FT SEELFQGFSSWVNPGLKWLSD" FT misc_feature 104883..105134 FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family" FT CDS 105773..107386 FT /transl_table=11 FT /locus_tag="DIP0126" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SCBAC36F5.07 TR:CAC42843 FT (EMBL:AL592292) (562 aa) fasta scores: E(): 3.6e-40, 35.62% FT id in 553 aa" FT /db_xref="InterPro:IPR010281" FT /db_xref="UniProtKB/TrEMBL:Q6NKA8" FT /protein_id="CAE48630.1" FT /translation="MNSPRIPSVLDASCEAYVYDLAAISPTDATAWGISGYDDQLQDFS FT PAYWEKVADQHRKLLNAIPAEDTLDSVDRVTAAVLRDRLGVELDIDAAGDNLAKLNNIE FT SPVQTIRDTFLLMPQDTDEQRDAIAARLTHLPRALAGYKESLQVAAAAGRVAAARQVQC FT VIEQLTELTQPQSMLTQLGVSGAAVEHAQAACGEMAQWLRTELLPKAPAEDAVGRERYQ FT RLSHLFVGDVVDLDDAYLWGQECLREIVDKQEAIAAELYGAGTSVADAMKRLDTEERYT FT IHGVDALQQWMQNQADRVIADLNGTHFAIPEPVRTIEAKIDPAGTGGIFYTPPSDDFTR FT PGRMWWSVPAGQEEFHTWQELTTVFHEAVPGHHLQCGQATCERDNLNLWRRVACWNSGH FT GEGWALYAEQLMAELGYHDDPGTMMGMLDAQRLRAARVVLDIGVHLRKTTPDGGVWDAA FT YAWDFLRANVAMDEKNLAFELDRYLGWPGQAPSYALGQRLWQDLRDSAVAQGMTLPEFH FT SRALALGSIPMSILRREILR" FT CDS 107390..107860 FT /transl_table=11 FT /locus_tag="DIP0127" FT /product="Putative MarR-family regulatory protein" FT /note="Similar to Streptomyces coelicolor putative FT regulatory protein SCE50.15 TR:Q9L048 (EMBL:AL163672) (168 FT aa) fasta scores: E(): 3.3e-18, 41.89% id in 148 aa" FT /db_xref="GOA:Q6NKA7" FT /db_xref="InterPro:IPR000835" FT /db_xref="UniProtKB/TrEMBL:Q6NKA7" FT /protein_id="CAE48631.1" FT /translation="MISTPPVARNIMRCMSDQLKLDQQICFQLYTGSRLMQRMYRVYFD FT QWGITYSQYLVLLLLWEKDRQTISELSDPLDLDSGTLSPLLRRMEANGFITREHEQSDY FT RKVVVCLTTRGRRLKTKAKKMNDELNDMLGFDDADLAAVTRVLEKINPSAAI" FT misc_feature 107513..107809 FT /note="HMMSmart hit to SM00347, helix_turn_helix multiple FT antibiotic resistance protein, DNA-binding" FT misc_feature 107534..107839 FT /note="HMMPfam hit to PF01047, MarR family" FT misc_feature 107585..107635 FT /note="FPrintScan hit to PR00598, Bacterial regulatory FT protein MarR family signature" FT misc_feature 107636..107683 FT /note="FPrintScan hit to PR00598, Bacterial regulatory FT protein MarR family signature" FT misc_feature 107693..107743 FT /note="FPrintScan hit to PR00598, Bacterial regulatory FT protein MarR family signature" FT CDS complement(107838..108890) FT /transl_table=11 FT /locus_tag="DIP0128" FT /product="Putative membrane protein" FT /note="Similar to Escherichia coli AbrB protein or B0715 FT SW:ABRB_ECOLI (P75747) (348 aa) fasta scores: E(): 3.6e-20, FT 30.72% id in 345 aa" FT /db_xref="InterPro:IPR007820" FT /db_xref="UniProtKB/TrEMBL:Q6NKA6" FT /protein_id="CAE48632.1" FT /translation="MAWNSSVAAKWLLVVPASAATGYVFSMLHVPAAWILGAIFVSATM FT AIVSGTELPIHKEVFNLGRGFIGILAGLPLATANPALLARYVLPGLMVTFVTLAIGIVG FT GMVLARAQPLLSQETGILSMLAGGASVMPVLAQDLGADFRYVALSQYLRLVAVSMSLPL FT VAHMIAPTGLDHVVTPRDDQPWWALALVCVIAVVGHRLAAVLRIPVPSILGPLLLIVAA FT SAVLPHVDFTPPMVVRIFAFLCIGWMCGGGLSVAALKFFARQVPATMIFIVVLLGGCAL FT TAWPLAATMGVDYFDAYLATSPGGLETVLALASEGGAGPIVVAVQIIRLLCVLLLAGWL FT PQLIRLLRRG" FT misc_feature complement(order(107871..107936,108015..108080, FT 108117..108182,108213..108263,108279..108335, FT 108381..108437,108564..108629,108645..108710, FT 108726..108791,108804..108869)) FT /note="10 probable transmembrane helices predicted for FT DIP0128 by TMHMM2.0" FT CDS complement(108895..109479) FT /transl_table=11 FT /locus_tag="DIP0129" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NKA5" FT /protein_id="CAE48633.1" FT /translation="MGVLSFVRLLRPVSVVRGYTLRSEVTKLVEVSTVRLTTVCQATVT FT TTAIATAVALGVCGCSSAGSVQQAAPETIQPGGYVVALSSDVDLACDFTPAQAQCSPLQ FT FVTTWKNTEGAHEQATTVVMQAEPFAVTATGKQPPVRDQGFARLGKEHRYVVGDPQSGW FT TIDASAPDSIKISRPDGKGVVITQDSYEAVN" FT CDS 109478..110248 FT /transl_table=11 FT /locus_tag="DIP0130" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor hypothetical 26.0 FT kDa protein SC7A8.24c TR:Q9L2D4 (EMBL:AL137187) (260 aa) FT fasta scores: E(): 1e-34, 42.8% id in 257 aa" FT /db_xref="GOA:Q6NKA4" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:Q6NKA4" FT /protein_id="CAE48634.1" FT /translation="MDLGLSGWAILTFGAAAAGWVDAVIGGGGLILIPLIMAVAPGLLP FT ANALATNKFAAVTGTFSAAVTLVRKVGVDTSLALRMIPVAAVGSGLGALMAASISKDVM FT RPIVIILMLIAGLFVALRPDFGQGNSTHKPWGRAVALIAVAAIALYDGIFGPGTGMFLI FT MAFTALLSQDFIRSAALAKVINTATNIGALCVFIAAGHILWKLGIILAIANVAGAQLGA FT RTVLGGGTRLLRAALLTLVVVMSIYLAQQQWFNG" FT misc_feature order(109487..109540,109559..109627,109706..109774, FT 109793..109846,109889..109987,110045..110113, FT 110171..110224) FT /note="7 probable transmembrane helices predicted for FT DIP0130 by TMHMM2.0" FT misc_feature 109556..109837 FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81" FT misc_feature 109892..110224 FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81" FT CDS complement(110238..112583) FT /transl_table=11 FT /locus_tag="DIP0131" FT /product="Putative ATP-dependent helicase" FT /note="Similar to Escherichia coli ATP-dependent helicase FT HrpB or B0148 SW:HRPB_ECOLI (P37024) (809 aa) fasta scores: FT E(): 2.6e-40, 35.09% id in 815 aa" FT /db_xref="GOA:Q6NKA3" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:Q6NKA3" FT /protein_id="CAE48635.1" FT /translation="MSFNLSVIGAGLPVAQSTTTLIDALRTHRMAVVQAPPGTGKTTLV FT PPIAHNVTGGRVIVVAPRRVAVRAAAHHLVQLDQSSCDQPSTHRVGYTIRGERSRGDLV FT EFVTPGVLLRRLISNPELDGVSAVVVDEVHERQLDTDLVLGMLVELRELRDDLTVIAMS FT ATVDAPHFAELLSPEHPAPIVETHAEIHPLELHYQPAAERIALSRSYMDHVCTVTQHAV FT AHFTDSALVFLPTIAAVTTAVSTLEQRTSVPVYPLHGQLTSSEQDAALRAGRQRIVVAT FT SIAESSLTVPGVRIVVDAGLSRVPKRDHARDLTGLVTTSTSQAQADQRAGRAGREGPGT FT VYRLYSAAEFQHFPDHVTPEIRSADLTQAALFLAAWGCTDPAQFPLLSAPPKQSWEQAV FT DTLRDIGALNAAGQITELGRTLATLPTDPRLGASLLHCGGGAAPTIAALSLDARGDIPR FT AIAAMSHQQRFTREVARLAGFVPDSECTPGEAIARAWPKNVARRDGDSYLMAGGSRAEL FT GVSSLSGHEWLAVAQASLTHRGSVIRSAAPISEAAAVDIIGVAERTEATLIDGSLRGTR FT IRHAGAITLSTTNVKVEGELAEQALAEGIRTHGLELFTFSDKATELRDRLRHLHEYYGE FT PWPDVDAADPTLWLGPEISALAAGTPAARIDLYPALQRLLPWPEATHLDELAPAVLELP FT NGRRARISYAGDRPVVSTKLQDCFGLLESPIVCGRPLQFHLLSPAGRPLAVTDTLDSFW FT AGPYQQVRSDMRGRYPKHPWPEDPLAIR" FT misc_feature complement(111552..112415) FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature complement(111573..111866) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(111990..112556) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(112179..112208) FT /note="ScanRegExp hit to PS00690, DEAH-box subfamily FT ATP-dependent helicases signature." FT misc_feature complement(112458..112481) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(112573..113142) FT /transl_table=11 FT /locus_tag="DIP0132" FT /product="Putative sugar acetyltransferase" FT /note="Similar to Streptomyces coelicolor putative sugar FT acetyltransferase SCBAC25F8.11c TR:CAC42146 (EMBL:AL592126) FT (193 aa) fasta scores: E(): 2.2e-24, 44.7% id in 170 aa, FT and to Escherichia coli galactoside O-acetyltransferase FT LacA or B0342 SWALL:THGA_ECOLI (SWALL:P07464) (203 aa) FT fasta scores: E(): 2.3e-21, 36.51% id in 178 aa" FT /db_xref="GOA:Q6NKA2" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/TrEMBL:Q6NKA2" FT /protein_id="CAE48636.1" FT /translation="MADQRAQRWHIPVSPEITQAMARTAELVFDYNATHPAHTEELSRL FT RRLILSPASKDCTIRQPLTIEYGVNTTIGKDTFINYGVTILDTAEVTIGSQVLIGPNCQ FT LITVTHPVDNADMRTAGWEIAHPIVVGKQAWLGAGVIVLPGVTIGERAVIGAGSVVTHD FT IPDDTIAYGNPARVIRTTNPHTTYEL" FT misc_feature complement(112651..112737) FT /note="ScanRegExp hit to PS00101, Hexapeptide-repeat FT containing-transferases signature." FT misc_feature complement(112657..112710) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(112711..112764) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(112822..112875) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(112882..112935) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT CDS 113144..113884 FT /transl_table=11 FT /locus_tag="DIP0133" FT /product="Putative DNA repair protein" FT /note="Similar to Escherichia coli alkylated DNA repair FT protein Alkb or AidD or B2212 SW:ALKB_ECOLI (P05050) (216 FT aa) fasta scores: E(): 1.4e-12, 35.02% id in 237 aa" FT /db_xref="GOA:Q6NKA1" FT /db_xref="InterPro:IPR005123" FT /db_xref="UniProtKB/TrEMBL:Q6NKA1" FT /protein_id="CAE48637.1" FT /translation="MAGVCGSKLMMARLVGMPDLFSDSGWGSGELPRALRPGLVHLPRW FT MGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASGTMSAYLMSLGLHWEYRTYQYVSQW FT GGVAVPPIPVEFSALAHEVLRAAAGVDDSLAAWVDSYRIDAALVNYYPPGAGMGMHQDA FT FEDSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGPSRDMFHSVVRLH FT AGTAPTRCGVSQGRINLTFRQVKL" FT CDS 113937..114524 FT /transl_table=11 FT /locus_tag="DIP0134" FT /product="Putative DNA-repair protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT DNA-3-methyladenine glycosidase I MT1248 TR:AAK45505 FT (EMBL:AE007001) (204 aa) fasta scores: E(): 8.3e-35, 52.71% FT id in 184 aa, and to Escherichia coli DNA-3-methyladenine FT glycosylase I Tag or B3549 SW:3MG1_ECOLI (P05100) (187 aa) FT fasta scores: E(): 1.5e-25, 44.88% id in 176 aa" FT /db_xref="GOA:Q6NKA0" FT /db_xref="InterPro:IPR005019" FT /db_xref="UniProtKB/TrEMBL:Q6NKA0" FT /protein_id="CAE48638.1" FT /translation="MNGMDLISCDDGRVRPAWAVGDALLRHYYDYEWGAPVHSESGLFE FT RLALEGFQSGLSWRTVLQKRAAFREVFWGFDADRVACMTEADVQALLVDARLIRNRRKI FT MAVVNNARAVIDLREHGGLDEVLWSFAPAQHTPPLTVADIPSQTVESRAMAKELKRCGF FT QFVGPTTCYATMQAVGMVDDRPRGASPLLVES" FT CDS 114529..115257 FT /transl_table=11 FT /locus_tag="DIP0135" FT /product="Putative oxidoreductase" FT /EC_number="1.-.-.-" FT /note="Similar to Mycobacterium tuberculosis putative FT oxidoreductase Rv0484c or MT0502 or MTCY20G9.10c FT SW:Y484_MYCTU (Q11150) (251 aa) fasta scores: E(): 1.2e-45, FT 57.32% id in 232 aa" FT /db_xref="GOA:Q6NK99" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NK99" FT /protein_id="CAE48639.1" FT /translation="MSNQHVVNEKKIAVVTGASSGIGEAAARALAADGWHVIVAARRKH FT LLDVLAADIAGTAIELDVTSDESVAAFAAQIPRCDLLVNNAGGALGLDPIAQANLEDWQ FT WMYNTNVLGTLRVTRALLDALSSSNGLIINISSIAGIAPYAGGAGYNAAKFGVSAMDKV FT MRIEFQERGIRVAEINPGRVHTDFSLVRFKGDQQAANAVYEGKVNLTAGDIAETIRWVA FT SLPTHVNIDRLVITPQDQVI" FT misc_feature 114553..115248 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase" FT misc_feature 114562..114615 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature 114577..114630 FT /note="FPrintScan hit to PR01397, FT 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature" FT misc_feature 114757..114792 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT /note="FPrintScan hit to PR00080, Short-chain FT dehydrogenase/reductase (SDR) superfamily signature" FT misc_feature 114829..114891 FT /note="FPrintScan hit to PR01397, FT 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature" FT misc_feature 114898..114948 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature 114916..114942 FT /note="FPrintScan hit to PR00080, Short-chain FT dehydrogenase/reductase (SDR) superfamily signature" FT misc_feature 114937..115023 FT /note="ScanRegExp hit to PS00061, Short-chain FT dehydrogenases/reductases family signature." FT misc_feature 114976..115035 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT /note="FPrintScan hit to PR00080, Short-chain FT dehydrogenase/reductase (SDR) superfamily signature" FT misc_feature 115021..115092 FT /note="FPrintScan hit to PR01397, FT 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature" FT misc_feature 115039..115092 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT CDS 115518..116276 FT /transl_table=11 FT /locus_tag="DIP0136" FT /product="Putative lipoprotein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK98" FT /protein_id="CAE48640.1" FT /translation="MRTPHRQGHTRWTKLPLVFAVGTLSVAMLAACGSDTATDTTDGSA FT GPSSPAAASATPTTADALSGRIVGAEDAPEGLTHEDFYAMFGSTEETPKDTINPPECEP FT LIFDSHTMFNWGSRARGTTAVSMYNSADGHQTAFIKIEEDAAEPVPDAGACATVTTENT FT STLGTSRTTYAIAPKELPIEGADTVVAVDQNLQGLTLDDADMSGARAGERTTVVIAQAH FT GHTITAVGTGDIPDQAITDLVNKQIHKLAS" FT misc_feature 115518..115682 FT /note="Signal peptide predicted for DIP0136 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.378 between residues 55 and 56" FT CDS complement(116460..116687) FT /transl_table=11 FT /locus_tag="DIP0137" FT /product="Conserved hypothetical protein" FT /note="Similar to a region of Corynebacterium glutamicum FT Ycg4K TR:Q9EUM3 (EMBL:AF164956) (256 aa) fasta scores: E(): FT 9.2e-09, 75.61% id in 41 aa" FT /db_xref="InterPro:IPR011091" FT /db_xref="UniProtKB/TrEMBL:Q6NK97" FT /protein_id="CAE48641.1" FT /translation="MGQARGWARKESQRRGNEHARRNAPLSHDDVIVQLTLGIWSEGRT FT ADAFAQRSITPRKPLGNQHPRTTQRPSDST" FT CDS complement(116920..117045) FT /transl_table=11 FT /locus_tag="DIP0138" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK96" FT /protein_id="CAE48642.1" FT /translation="MDSEKETQENDEQGRFHLPPAISLEREDVVKFNQAPDRPRS" FT CDS complement(117050..117379) FT /transl_table=11 FT /locus_tag="DIP0139" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK95" FT /protein_id="CAE48643.1" FT /translation="MIFVSIPKNGDGNSCWYGLALIFGVIAAILGAIALFFRSKGQELK FT LSSLEAQLVGKTEIEAMRALTESKRITLSQGRAQIQGISKFVIWGFVSLVVSLMCTVAY FT SLVGG" FT misc_feature complement(order(117056..117121,117269..117334)) FT /note="2 probable transmembrane helices predicted for FT DIP0139 by TMHMM2.0" FT CDS complement(117622..>117900) FT /transl_table=11 FT /locus_tag="DIP0140" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK94" FT /protein_id="CAE48644.1" FT /translation="WLCRDLVSMGPEEGEVSGKNVHQSWDSERQQWKVGREGASRASGY FT RDTESEARKWSQKLAKDSGSEWIKHRKDDGRIHQRNSYGDDPFPPRG" FT CDS 118089..118232 FT /transl_table=11 FT /locus_tag="DIP0141" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK93" FT /protein_id="CAE48645.1" FT /translation="MILCRHIKKSRGGSNNCQPALDENTEKVGVALPKTERYPQGFGVD FT LR" FT repeat_region 118305..118330 FT /note="Possible inverted repeat" FT CDS 118306..118980 FT /transl_table=11 FT /locus_tag="DIP0142" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK92" FT /protein_id="CAE48646.1" FT /translation="MGSEGRCNTFIRKRLLMASTLGPFHSLIDADKHRLTELITAGSSV FT HAAVRLLNANYRHCLNYAHHNTLITPRRQSTVVPQQRAAFLTQINNENTSIRRAAIDTE FT LSLSVAYRLARGTGQHTRRSRYQQRVDSTNLRLEYLRLRLACLSQRDAATAVGIGRRAA FT YDFDHGVSHTGSPRRRFIPNGPHAKAYNTCMTTLAARHDVIEEGRLSAPALPTRIDPYK FT TH" FT CDS join(118976..119083,119091..119708,119716..119988) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0143" FT /product="Putative transposase (pseudogene)" FT /note="Pseudogene. Similar to Mycobacterium tuberculosis FT CDC1551 IS1603, transposase MT3281 TR:AAK47622 FT (EMBL:AE007140) (344 aa) fasta scores: E(): 2.1e-42, 40.65% FT id in 337 aa. Presents frameshifts at residues 36 and 242" FT /db_xref="PSEUDO:CAE48647.1" FT misc_feature 119100..119708 FT /note="BlastProDom hit to PD002997, PD002997" FT misc_feature 119493..119711 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT misc_feature 119716..119961 FT /note="BlastProDom hit to PD002997, PD002997" FT misc_feature 119725..119952 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT repeat_region 119997..120022 FT /note="Possible inverted repeat" FT CDS complement(120068..120265) FT /transl_table=11 FT /locus_tag="DIP0145" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK91" FT /protein_id="CAE48648.1" FT /translation="MVRVSLFLLATPVHQDRVNFRTEIKKAITTVTKFWPDAGITADLK FT GVTIQRGQPSITIEPKKELG" FT CDS 120487..120867 FT /transl_table=11 FT /locus_tag="DIP0146" FT /product="Putative integral membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK90" FT /protein_id="CAE48649.1" FT /translation="MPIAAALSASVGLILLSVLCLTLPKVAMSGNIQRNSAIGIRTKET FT KKSDSAWLEGHRKATPILQATGIITLGITAILLVSSFFQAFPPLLPVVSGILAYGVLFA FT GFIAGAVVANKAAKNVNIQKGI" FT misc_feature 120487..120573 FT /note="Signal peptide predicted for DIP0146 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.536 between residues 29 and 30" FT misc_feature order(120499..120567,120679..120747,120760..120828) FT /note="3 probable transmembrane helices predicted for FT DIP0146 by TMHMM2.0" FT CDS 120867..120974 FT /transl_table=11 FT /locus_tag="DIP0147" FT /product="Putative lipoprotein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK89" FT /protein_id="CAE48650.1" FT /translation="MRKLSKVAIAVAITVSAACSGIAYAQTSHADQVTQ" FT misc_feature 120867..120941 FT /note="Signal peptide predicted for DIP0147 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.979 between residues 25 and 26" FT misc_feature 120885..120944 FT /note="1 probable transmembrane helix predicted for DIP0147 FT by TMHMM2.0" FT CDS join(121083..121232,121238..121303) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0148" FT /product="Conserved hypothetical protein (pseudogene)" FT /note="Pseudogene. Similar to the plasmid borne FT Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 FT aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. FT Presents a frameshift at residue 50" FT /db_xref="PSEUDO:CAE48651.1" FT CDS 121423..121722 FT /transl_table=11 FT /locus_tag="DIP0149" FT /product="Conserved hypothetical protein" FT /note="Similar to Bacillus subtilis hypothetical 7.9 kDa FT protein in dnaN-recF intergenic region YaaA SW:YAAA_BACSU FT (P05650) (71 aa) fasta scores: E(): 2.5e-05, 44.92% id in FT 69 aa" FT /db_xref="GOA:Q6NK88" FT /db_xref="InterPro:IPR002942" FT /db_xref="UniProtKB/TrEMBL:Q6NK88" FT /protein_id="CAE48652.1" FT /translation="MCMQAQDVTIRDQEIKLGQFIKLANLVETGGAAKEVIAEGRVTVN FT GAVDTRRGKTLRDGDVVCIGTACARVVAGAADDDDYFDEKTANDDFDPEVWRNM" FT misc_feature 121465..121608 FT /note="HMMPfam hit to PF01479, S4 domain" FT CDS 121722..122546 FT /transl_table=11 FT /locus_tag="DIP0150" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT0934.1 TR:AAK45182 FT (EMBL:AE006980) (257 aa) fasta scores: E(): 3.3e-32, 41.96% FT id in 255 aa" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:Q6NK87" FT /protein_id="CAE48653.1" FT /translation="MPAFQAEPGMPYWIDLTTSDLRKSTYFYSHVLGWEIEEFGADYHL FT ARVQGLPVAGFIKRPENHQQPDTWVTYFMTDNIAADCAEVEKLGGRVLAVPMEVRLGQM FT ALVVDNAGGLFGLIQPAGEDAFIAAGEPGTPVWHELTATTNYTKAVEFYPALFGWATAT FT MDTDGSFGYTTAQVDGGAIAGIFNAEGQFPPQVPSFWQSYLGVAEVDAAVAATVEYGGS FT VIREPWDTEFGRMAIIADSTGATVTLCEAPEPVEEGNESDSLEGIDLSQFGL" FT misc_feature 122145..122492 FT /note="HMMPfam hit to PF00903, Glyoxalase/Bleomycin FT resistance protein/Dioxygenase superfamily" FT CDS 122552..122857 FT /transl_table=11 FT /locus_tag="DIP0151" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SC10F4.36c TR:Q9F3M5 (EMBL:AL450350) FT (94 aa) fasta scores: E(): 8.6e-07, 38.2% id in 89 aa, and FT to Mycobacterium tuberculosis hypothetical 11.0 kDa protein FT Rv3204 or MTCY07D11.22c TR:O05862 (EMBL:Z95120) (101 aa) FT fasta scores: E(): 0.00013, 40% id in 95 aa" FT /db_xref="GOA:Q6NK86" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NK86" FT /protein_id="CAE48654.1" FT /translation="MGTDCSQHVPLSDLTERVLADVDTIPSGAVTTYGDIARRVGCGAR FT HVGSIMRRYGALTAWWRVVRADGTLAVADRAIEHWDRENIAHNGKRVDLSQCYYQP" FT misc_feature 122582..122824 FT /note="HMMPfam hit to PF01035, 6-O-methylguanine DNA FT methyltransferase, DNA binding domain" FT misc_feature 122642..122707 FT /note="Predicted helix-turn-helix motif with score 1011 FT (+2.63 SD) at aa 31-52, sequence TTYGDIARRVGCGARHVGSIMR" FT CDS complement(122867..123787) FT /transl_table=11 FT /locus_tag="DIP0152" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK85" FT /protein_id="CAE48655.1" FT /translation="MTDTSNISPEERREREEFLIGGHDRILTPEQQLEQLSTYIAAHYE FT APAKNPPWSDNPSDKDAIDTFDARLPDRITHACMLMLGSALDHTMPGVAFIDGVTTQDV FT PELGGQIIRPANPNGAWAISLHPGGWWKGSGVALDNAWRPEVAAVANLSDVTFLDLDYP FT LVPEHTLEQVIATVTTAAQWVRDNQQPTAMFAWGYSSGGALTTLTHSLWDAQALTFPHL FT DLTGLPPEVVGGISFPDAAQFPPTLMQVASNDAIAGHYPWAEEPKQVRVLEYVSEHRVS FT TPEVARQRVRDVAEFFAHQAAQHSA" FT CDS 123927..124553 FT /transl_table=11 FT /locus_tag="DIP0153" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK84" FT /protein_id="CAE48656.1" FT /translation="MSGISIIENAVLKPTKREVAEQWLGYFEHIGSYRFVDPDGQVGIE FT SLIGFDLDRRLVQMPVTYRSAEFDAEHTLTTMDHSVLGTRYVSNAMGDPVAVREYIRVI FT LEADNGAQRSDGKVSVLDVRGSGNREEKLTLGEVRILEATRQRAVGYVRIDGTLRGFVL FT RVPHLLVPENSPRLGHNISPMRLNGSVVMSPKTVLIAAELSWHDI" FT CDS complement(124561..126570) FT /transl_table=11 FT /locus_tag="DIP0154" FT /product="Putative endopeptidase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT endopeptidase, peptidase family M13 MT0208 TR:AAK44429 FT (EMBL:AE006930) (663 aa) fasta scores: E(): 2.9e-89, 46.97% FT id in 662 aa" FT /db_xref="GOA:Q6NK83" FT /db_xref="InterPro:IPR006025" FT /db_xref="UniProtKB/TrEMBL:Q6NK83" FT /protein_id="CAE48657.1" FT /translation="MRLPPMLDNLTRMARMNDNQHRFALSDLYRFVNGPWLDSHVIPED FT RGVDGIFHGLRDRAEEDVHTIVMDSADSLAGKLYASFMDTEGIESAGVAALDKDLTLID FT VATVPEFVQALGALDRVGVGGPVGFWVAKDSAGDKSVAYIMQSGITLPDEAYYREESHA FT QTREAYQKHVEKMLGFLAPEQLGTTPIDAATRILALETDIAAAHWDVVQRRDAVKTFNP FT TEMAELPPQVAALLRAAGLPEHRVISMMPSYFEALESLLTPQRLDDWKLLTTWRILHSR FT AGVLTPEISRADFEFFGTTLSGATQQRDRWKRALGLAESFVGEEIGALYVERHFPESSK FT KDMLSLVSYLIEAYRERISGLSWMTPETRERALDKLDKFNAKIGYPDSWRSYAGLEFSA FT KGTDLLDNVRAGSAFAHDYELNKIGRLADRNEWVTTPQTVNAFYNPVVNDITFPAAILR FT APFYSPDADAAENFGAIGAVIGHEIGHGFDDQGSQYDGHGNLQSWWTDEDRAAFSALTD FT RLVEQFEGLVPSVLADNNPSGAGVNGRFTLGENIGDLGGLGIAVIAYRRYLADHGLDFD FT STPLAAFHAEDADPELEKTQFTGLQRLFLAWARVWRTAIRPELAAQYLAIDPHSPAEFR FT CNVIAGNVAEFYQAFDVAEDSPMWIAPEKRVTIW" FT misc_feature complement(124573..125253) FT /note="HMMPfam hit to PF01431, Peptidase family M13" FT misc_feature complement(124891..124926) FT /note="FPrintScan hit to PR00786, Neprilysin FT metalloprotease (M13) family signature" FT misc_feature complement(125110..125139) FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT misc_feature complement(125110..125160) FT /note="FPrintScan hit to PR00786, Neprilysin FT metalloprotease (M13) family signature" FT misc_feature complement(125185..125223) FT /note="FPrintScan hit to PR00786, Neprilysin FT metalloprotease (M13) family signature" FT misc_feature complement(125239..125277) FT /note="FPrintScan hit to PR00786, Neprilysin FT metalloprotease (M13) family signature" FT CDS 126599..127231 FT /transl_table=11 FT /locus_tag="DIP0155" FT /product="Putative secreted protein" FT /note="No significant database matches. Possible secreted FT protein" FT /db_xref="UniProtKB/TrEMBL:Q6NK82" FT /protein_id="CAE48658.1" FT /translation="MSHYQFRPAVTAKTWSLLALGVITALVLPALLNMVTPDVDTKTVN FT VSLGSEQEKWEMPMFKNDSSRLQCEESMSDLLTPTWDCDGATLTSMVVWGSQDQDTTLR FT RMMRLNSMIDPGDEVPILHKGGVRIISSPEMPNQVGLSLERPADDVEHTGTLFVLVDGP FT EFDSYAELVFNNLRAEEARIAGGEHEPMTLEELTKGFDKAHKGDAHT" FT misc_feature 126599..126715 FT /note="Signal peptide predicted for DIP0155 by SignalP 2.0 FT HMM (Signal peptide probability 0.974) with cleavage site FT probability 0.622 between residues 39 and 40" FT CDS 127228..128148 FT /transl_table=11 FT /locus_tag="DIP0156" FT /product="Putative membrane protein" FT /note="No significant database matches. Possible membrane FT protein" FT /db_xref="UniProtKB/TrEMBL:Q6NK81" FT /protein_id="CAE48659.1" FT /translation="MSTQRAQPASISWVLWTLIGISIPVIAFFTFANFFASPIAAFLGV FT LFGLVYFAVGTALFFFSPMWPTAGWKWYFACIGWGAGASFCIVMLSAAPFTDLTDKLGW FT EAVSASFAGAYPEEIAKSLGVLLILFTFSKLTRPWHGFVTGAMIGLGFEVFENISYGVL FT GAMSDPNTDITGALYSWWIRSIAGPGLHVAFTAIAGYGIGLAVFRYGWDTLQRFLVGLC FT ALGVAFCLHFTWNLQFDSYAKQIANFIIVALILYPLMVWLWLRCHRQAKNDLGVVRMKR FT PITTIAELQRRKLATTSEESQPHAS" FT misc_feature order(127264..127332,127342..127410,127447..127515, FT 127558..127626,127645..127713,127771..127839, FT 127876..127932,127960..128019) FT /note="8 probable transmembrane helices predicted for FT DIP0156 by TMHMM2.0" FT CDS 128138..129046 FT /transl_table=11 FT /locus_tag="DIP0157" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 amino FT acid ABC transporter, amino acid-binding protein, putative FT MT3866 TR:AAK48230 (EMBL:AE007181) (343 aa) fasta scores: FT E(): 2.6e-26, 35.69% id in 311 aa" FT /db_xref="GOA:Q6NK80" FT /db_xref="InterPro:IPR007210" FT /db_xref="UniProtKB/TrEMBL:Q6NK80" FT /protein_id="CAE48660.1" FT /translation="MRLNIRRIIAATVTAGALALSSCGSIESIEGGSHHNSDTIVVGSQ FT DYYSNEIIAEIYSQALEAKGYTVDRQFRIGQREVYVDEIESGRIDVFPEYTGPLLQHWK FT PDTEAREKTEVYQQLKEALPEHLVALDQSAATDQDSYVVTEEFAKKHHVNSIADLAEAA FT KKQPLTLGANSEAQDRPNGPKGLEKTYGVSVGFTPIEDSGGPLTVKALRDNSIQLAIIY FT SADPSISTNHLTNLEDPKGQFLASHVVTIAHDDVPLGAATVLNKVNATLTTEQLRELNA FT RSVNEQLPSSVIAKDWIKQHL" FT misc_feature 128138..128221 FT /note="Signal peptide predicted for DIP0157 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.326 between residues 28 and 29" FT CDS complement(129067..129504) FT /transl_table=11 FT /locus_tag="DIP0158" FT /product="Putative secreted protein" FT /note="No significant database matches. Possible secreted FT protein" FT /db_xref="UniProtKB/TrEMBL:Q6NK79" FT /protein_id="CAE48661.1" FT /translation="MRKLTMVGITAAVVGASVIAGISGMTSRNSDHITAASLISASSEV FT RSAPADGTISEPGTYRVGNQDIRVTTTEPVILVLCGPEVASISASGPLGLSLDEDVRLG FT SLQTTGDVTLVGRGDLYIAETLSAAHVSTQTGQLVTHGVPR" FT misc_feature complement(129421..129504) FT /note="Signal peptide predicted for DIP0158 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.457 between residues 28 and 29" FT stem_loop complement(129618..129713) FT CDS complement(129730..133155) FT /transl_table=11 FT /locus_tag="DIP0159" FT /product="Putative transferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT arabinosyl transferase MT3902 TR:AAK48268 (EMBL:AE007183) FT (1098 aa) fasta scores: E(): 1.3e-49, 38.11% id in 1149 aa" FT /db_xref="GOA:Q6NK78" FT /db_xref="InterPro:IPR007680" FT /db_xref="PDB:3BYW" FT /db_xref="UniProtKB/TrEMBL:Q6NK78" FT /protein_id="CAE48662.1" FT /translation="MTKPMNTNITGIKWAAILSGVIGFVLFIITPLMPVNQVQSSVSWP FT QNGSLNSVSAPLMSYTPISFDAKIPVASVDKLRKDQDLILGTLPANSEDAGARGLFVRA FT NDDGLQITSHGELVLDLSKRELAQLPADATIAISATEDETTAGIEGDDSTTETVERDVR FT PIIMGIYTELESNAAADLLNAGLNAHVEINSRFTSSPTLAKYASMWLGGLMLLISLISL FT GMLDRRDGATDIRFLNKGFFRPRPLDAIVGAILLVWYFIGANTSDDGFILTMARASSAS FT DYMANYYRWFGVPESPFGAPYYDLLGLMSKVSTASIWMRLPSLISAIVIWLVLSREVLP FT RLGEKIAQRRVAQWTTAFVFLSFWLAYNNGLRPEPIIAAGTLLTWLSFEVAIATQRLLP FT AAIGTMLAAFTLACGPTGLMAVTAVLAGLSYLIRIVYRRLPYLNTGASKRSIAVSVMAM FT VAPFMAAGTAVFIAVFGDQTLRNVLESIHVRGDKGPALSWYNELVRYQVLMMQTVDGSF FT ARRVGVFFTFVAAALVGATILRQGKVPGTNKGPVMRLMLVMVGTLFFMMFTPTKWTHHF FT GVWAGIAAALAGVGAVALSHIALRSPRARILLTGGILFVFAFALAGPNGWWYTSSYSIP FT WWDKTIQFHGIEASTVMLLLSLVVMAAGVLVSFRKDVAEEQAEARGEDPAMVNRPFRKQ FT HFEGLAAAPIAILSIFAVAFSLASLSKGFIDQYPNYSVGLGNLRSLKGDTCNLANDVLV FT ETNTNESFLTPLTGTLGDSLTNDDVRGFDPNRISPWAFTPENRPEALGAANSTGDGSDT FT AAADSDASNTAAGADSDGSAAKADAASDNQEEAAKKKETHRADQGVNGSHSRLPFNLDY FT RTVPVLGSWTDGKQEIAEATSSWFKLPKANDNTPLVVVSAAGSIKHKDVNGIVENGQKI FT VLEYGRSNTGGSLGKAEKLGELDLLDSGIDSTWRNLRIPLSDIPDDADVIRIHAKDTSL FT DPDEWIAFTPPRVPTMDTLANQFPASTPGLLDWAVPLQFPCQRTFNHYAGVAEIPEYRI FT SADAKGKQSGMNFQDFAGGGVTGIAETINSSYELPSYSKNDWVRDWGSIKMYKLRTNSK FT GEAPDVATVDTETITRSGLWYPGRMNIDTKVTKN" FT misc_feature complement(order(131002..131067,131161..131226, FT 131272..131337,131359..131424,131455..131505, FT 131542..131607,131737..131802,131866..131931, FT 131962..132027,132139..132204,132367..132417, FT 132481..132537,133051..133116)) FT /note="13 probable transmembrane helices predicted for FT DIP0159 by TMHMM2.0" FT misc_feature complement(133036..133155) FT /note="Signal peptide predicted for DIP0159 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.802 between residues 40 and 41" FT CDS complement(133148..135232) FT /transl_table=11 FT /locus_tag="DIP0160" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 69.5 kDa protein CY13D12.26 Rv3792 or MTCY13D12.26 FT TR:P72058 (EMBL:Z80343) (643 aa) fasta scores: E(): FT 3.7e-53, 34.5% id in 652 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NK77" FT /protein_id="CAE48663.1" FT /translation="MSRPCAKLLSMTESAPSKHASPSGGSSQVRAQRNTTQGEASDSEL FT TSVVMYAPDQLSAKATLIAIVATIFGSSICTLGLWYLLKVVKLPPFGGSQVTKAGATVG FT IFLTLLVTCIFVLWWMADDKRGTTRPRWRTWITYAVTHMAPAGLVMAAIGVPLSPSRLY FT LEGITVDQGFRTQFLTRLTATQGLPDMNYADLPAYYPGAWFWLGARFAQLIGYPGWAIY FT QPWALLSIAVTGCVLVPVWQRLVGSLPVATAIALVTTAIALTLCAFEPYACVIAMGIPA FT ALVMGRRALSGQKLATVGVVVYLGASASTYTLYTAVIALSLVTVSGLFFAFVLRSWRPI FT RQIIVIGVSSMAIASIVWGPYLWLRFTGHYEGTAAASHFLPPEGTVVPLPMFATSFVGV FT LCFIGLIYLIMRVMDPDVCAMGVGLAVMYLWVIASMSVALSGTTLLGFRLDSVITIILG FT TAGVLGLAELRLVAVHRFYPVQFSTSLSTRINVICVVVLALAGIQYAQAIPDRNAHAIE FT LAYTNTDGDGHRADFLPPDATQYYAEVDRVIQEKTGKPAADTVVLTDEFNFLTYYPYLG FT FQAFTSHYANPLGEFEKRNAVIENWASQSWDSLKDPQDFDRAVSNVPWRSPDAFVLRAD FT STGSSDSKDGWNFNLAIDIFPSNPNVWFKGVRFNPEVFQGENSPWTVTQVGPFVVVTHD FT " FT misc_feature complement(order(133709..133774,133814..133879, FT 133910..133966,134006..134071,134132..134197, FT 134234..134299,134429..134494,134510..134575, FT 134765..134830,134870..134935,134981..135046)) FT /note="11 probable transmembrane helices predicted for FT DIP0160 by TMHMM2.0" FT misc_feature complement(133796..133846) FT /note="ScanRegExp hit to PS00237, G-protein coupled FT receptors family 1 signature." FT CDS complement(135343..136104) FT /transl_table=11 FT /locus_tag="DIP0161" FT /product="Putative oxidoreductase" FT /note="Similar to Mycobacterium leprae putative FT oxidoreductase ML0108 TR:Q9CDA5 (EMBL:AL583917) (254 aa) FT fasta scores: E(): 5.6e-50, 57.14% id in 252 aa" FT /db_xref="GOA:Q6NK76" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NK76" FT /protein_id="CAE48664.1" FT /translation="MLNAVGQAQNILLLGGTSEIGLSIVAEFLAKGPAHVTLAARQDSP FT RIDAAVAQMKAAGASEVDVIDFDATDFDKHAEVIDLAWAQGDVDLAIVAFGTLGDQEQL FT WQDQKAAVTSAQTNYTAPVSVGVLLGEKFKEQGHGTIVALSSVAGQRVRRSNFVYGASK FT AGMDGFYVNLGEALRPSGANVVVVRPGQVRTKMSADAGEAPLTVNKEDVAKATFDAVLN FT RKSAIFVHPLFEYVSLAFKFIPQAIFRKLPF" FT misc_feature complement(135364..136086) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase" FT misc_feature complement(135514..135567) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(135523..135564) FT /note="FPrintScan hit to PR01167, Insect alcohol FT dehydrogenase family signature" FT misc_feature complement(135571..135630) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(135577..135633) FT /note="FPrintScan hit to PR01167, Insect alcohol FT dehydrogenase family signature" FT misc_feature complement(135583..135669) FT /note="ScanRegExp hit to PS00061, Short-chain FT dehydrogenases/reductases family signature." FT misc_feature complement(135649..135693) FT /note="FPrintScan hit to PR01167, Insect alcohol FT dehydrogenase family signature" FT misc_feature complement(135658..135708) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(135814..135849) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(136024..136077) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(136045..136080) FT /note="FPrintScan hit to PR01167, Insect alcohol FT dehydrogenase family signature" FT CDS complement(136124..137590) FT /transl_table=11 FT /locus_tag="DIP0162" FT /product="Putative oxidoreductase, FAD-binding" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT oxidoreductase, FAD-binding MT3898 TR:AAK48263 FT (EMBL:AE007183) (463 aa) fasta scores: E(): 4.2e-118, FT 67.57% id in 478 aa" FT /db_xref="GOA:Q6NK75" FT /db_xref="InterPro:IPR007173" FT /db_xref="UniProtKB/TrEMBL:Q6NK75" FT /protein_id="CAE48665.1" FT /translation="MTTDKGTSSTAASNGASGALYTEAKKLTGWGRTAPTTAEVLSTPD FT LDVIVDAVRQVAEQNDSKPAHLKRGVIARGMGRSYGDPAQNSGGLVVDMQALNKIHSID FT PESAIVDVDGGVTLDQLMKAALPYGLWVPVLPGTRQVTIGGAIGPDIHGKNHHSAGSFG FT DHVASMELLVADGRILHLEPEGSADDPTGELFWATVGGMGLTGIIVRARIRMTKTETAY FT FIADGDLTANLDETIEFHSDGSEHNYTYSSAWFDAISPEPKLGRAAISRGSLATLAQLE FT EIAPKLAKDPLKFNAPQLVTVPDIFPSFTMNKLSMIAIGELWWLKSGTYKNKVQNLTQF FT YQPLDLIGEWNRGYGSKGFLQYQFVVPREAVEPFKDIVKDIQKSGHYSALNVFKLFGEG FT NKAPLSYPMPGWNVCVDFPIKPGLGAFLDDLDKRVMEFGGRLYLAKESRTSAENFHKMY FT PGMEGWLKTRNAIDPTGVFASDMSRRLELH" FT misc_feature complement(136979..137527) FT /note="HMMPfam hit to PF01565, FAD binding domain" FT CDS complement(137707..137955) FT /transl_table=11 FT /locus_tag="DIP0163" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK74" FT /protein_id="CAE48666.1" FT /translation="MFGFLRKSQPVPQPQEATSDTIATQHTSAPLSNDMMLLMAEEIPM FT LDSNSRVRVYEILEQYDGPTICSQEELPREIREMMDL" FT CDS 137984..138418 FT /transl_table=11 FT /locus_tag="DIP0164" FT /product="Putative membrane protein" FT /note="No significant database matches. Possible membrane FT protein" FT /db_xref="UniProtKB/TrEMBL:Q6NK73" FT /protein_id="CAE48667.1" FT /translation="MSWGFASVCPMTNQARICRLSAALSVGLITALPDYVANKAVRWLL FT NSLIAGAGVGVVAYVNKQDEDPTNDLDVVARELIDDSQFGPAATWGLFLAVVVLLFVQR FT IDAKLTAVVTGWLRRRGVRAPHTVLGVLAAALTYAEVSKS" FT misc_feature order(138026..138094,138113..138166,138230..138289) FT /note="3 probable transmembrane helices predicted for FT DIP0164 by TMHMM2.0" FT CDS 138415..138963 FT /transl_table=11 FT /locus_tag="DIP0165" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK72" FT /protein_id="CAE48668.1" FT /translation="MISVIDVLSGLADNPTVVMWHVHTSPDYPTSLMSGAWVLGPAESH FT GVDSLGSLLTNTWALPLTPAAAALVPAGIPVISLDDVRAAVEAGLGEIKSVIASAKQDN FT PKLVAPRFNALPTISPDDFRAAYHGEPQAETAWSAASAVAAWMQTWLDIEQQRRSRAYL FT KDALGSSARSLPLHLLPTR" FT CDS 138975..139394 FT /transl_table=11 FT /locus_tag="DIP0166" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 13.4 kDa protein Rv3789 or MT3897 or MTCY13D12.23 FT SW:Y1I9_MYCTU (P72055) (121 aa) fasta scores: E(): 4.2e-17, FT 48.78% id in 123 aa" FT /db_xref="GOA:Q6NK71" FT /db_xref="InterPro:IPR007267" FT /db_xref="UniProtKB/TrEMBL:Q6NK71" FT /protein_id="CAE48669.1" FT /translation="MTTTNSAAPQSVTSQGIRFIISGGISAVVDLGLTYICQILFGFSA FT AGGRTIGFIFGTLTAYLINRRWTFQAEASTKRFIQVAVLYTITYFVNVGGHALLFGLFT FT SSGLGDRVALVIAFVISQGVATVINFFVQRWFIFK" FT misc_feature order(139032..139100,139110..139178,139215..139283, FT 139311..139370) FT /note="4 probable transmembrane helices predicted for FT DIP0166 by TMHMM2.0" FT stem_loop 139418..139511 FT /note="Score 57: 19/19 (100%) matches, 0 gaps" FT CDS 139604..140383 FT /transl_table=11 FT /locus_tag="DIP0167" FT /product="Hypothetical protein" FT /note="No significant database matches. Note: Also similar FT to DIP2059 (271 aa) E(): 1e-38; 44.747% identity in 257 aa FT overlap" FT /db_xref="GOA:Q6NK70" FT /db_xref="UniProtKB/TrEMBL:Q6NK70" FT /protein_id="CAE48670.1" FT /translation="MTHGLYWQGDVNVDELAAALCRRGFVLTGVTELELLARQPLTLPL FT HVVANRRVKSTEYVVIHRSSVRKYARVADVLIELPVYAMRWLGRRQAIRLAEIAYAGRE FT GRARLERHAQGAVPVRVREIVQASVIGADSPPERDLVRALRSAGVECESNVRVGDYRWD FT IRICGSAVLIEVDGYAYHNAENRETFRLDRWKANDATLRGYLVLRYSAVCVRESLDVIV FT DQVVQAVQCAPKQLRDVDEARCWHRGAWKWMPGLAWL" FT CDS complement(140517..141434) FT /transl_table=11 FT /locus_tag="DIP0168" FT /product="Putative glycosyl transferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT glycosyl transferase MT3891 TR:AAK48256 (EMBL:AE007182) FT (304 aa) fasta scores: E(): 1.8e-71, 62.17% id in 304 aa" FT /db_xref="GOA:Q6NK69" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q6NK69" FT /protein_id="CAE48671.1" FT /translation="MPLSTSDNIAAVIVTHKRVELLRASLEVVAAQTHPVKWIIVVDNG FT CEDAVRDLLHSVAGDRGIYLPSHTNLGGAGGFAYGFLTALALGADAIWCADDDGRPEGP FT QVLATLIDAAVTHQLDEVSPVVCNMDDPNRLAFPLRRGLEWRRYRSELIDPNNPSDTLL FT PGIASLFNGALISAAAMERIGVPDLRLFIRGDEVEYHRRLVRSGLNFGTCLTTAYLHPD FT GSDEFKPILGGRMHTQYPASDAKRYFTYRNRGYLMNQPGMRRLLPQEYARFAWFFLIQR FT RDPRGFLEWFKLHQLGRSEKFERP" FT misc_feature complement(140898..141407) FT /note="HMMPfam hit to PF00535, Glycosyl transferase" FT misc_feature complement(141105..141413) FT /note="ProfileScan hit to PS50167, General FT Glycosyltransferase domain." FT CDS 141608..142573 FT /transl_table=11 FT /locus_tag="DIP0169" FT /product="Putative secreted protein" FT /note="Similar to Treponema pallidum periplasmic FT zinc-binding protein TroA or TroMP1 or TP0163 FT SWALL:TROA_TREPA (SWALL:P96116) (308 aa) fasta scores: E(): FT 4.2e-29, 35.27% id in 292 aa, and to Streptococcus FT pneumoniae manganese ABC transporter substrate-binding FT lipoprotein precursor PsaA or SP1650 SWALL:P72538 FT (EMBL:U53509) (309 aa) fasta scores: E(): 1.6e-19, 28.47% FT id in 309 aa, and to Streptococcus gordonii challis FT coagregation-mediating adhesin precursor ScaA SW:ADHS_STRGC FT () (310 aa) fasta scores: E(): 1.9e-20, 30.15% id in 315 FT aa. Note: Also similar to the downstream DIP0173 (333 aa) FT E(): 6.5e-38;56.061% identity in 330 aa overlap. Contains a FT putative twin-arginine translocation (TAT) system FT recognition motif (RRGFIR) at the N-terminal region" FT /db_xref="GOA:Q6NK68" FT /db_xref="HSSP:1K0F" FT /db_xref="InterPro:IPR006127" FT /db_xref="UniProtKB/TrEMBL:Q6NK68" FT /protein_id="CAE48672.1" FT /translation="MSRRGFIRTAAASVAALALTGSLVACSTDSASTSATTSAANKALT FT VFATTGYIGDAVKNIAPDADVTIMVGPGGDPHTYQPTTQDISKIESSDVVLWSGLHMEA FT KMLDQLKAQGDRQAAVAEAIPEDKRLDWPEPGDNGEKLYDPHVWNSTENWKYVVDAIAK FT KLSEVDKDNAATYKDNAEKYKKEIDETAAYVKEQIDQIPEQKRILITGHDAFSYFGKQF FT GVEIHATDFVTSESEMSPAELAELGKFIAEKKIPTIFQDNLANPQAINSLKETVKAKGW FT NVEISDKELYADSLGESAPTDTYLGVLKYNADAIREALAK" FT misc_feature 141608..150356 FT /note="Anomalous G+C content (57.26%) and GC deviation. FT Putative metal transport system" FT misc_feature 141614..141631 FT /note="Potential twin-arginine recognition motif RRGFIR" FT misc_feature 141743..142567 FT /note="HMMPfam hit to PF01297, Periplasmic solute binding FT protein family" FT misc_feature 141806..141862 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 141824..141865 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 141863..141916 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 141863..141922 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 142034..142093 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 142208..142261 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 142208..142273 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 142367..142423 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 142499..142555 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT CDS 142673..143407 FT /transl_table=11 FT /locus_tag="DIP0170" FT /product="Putative membrane protein" FT /note="Similar to Bacillus subtilis probable metal FT transport system ATP-binding protein YtgB SW:YTGB_BACSU FT (O34338) (250 aa) fasta scores: E(): 5.3e-33, 45.61% id in FT 228 aa, and to Streptococcus gordonii challis hypothetical FT ABC transporter ATP-binding protein in ScaA 5'region FT SW:YSC1_STRGC (P42360) (251 aa) fasta scores: E(): 4.6e-30, FT 40.26% id in 231 aa" FT /db_xref="GOA:Q6NK67" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NK67" FT /protein_id="CAE48673.1" FT /translation="MSVPLHALPPALVMRNVSARYGSTVAVERASVVVPAGTVMGFIGP FT NGAGKSSLIKAAIDLIDRDGEVEFFGESLAACRNRVGYMPQSADVDWDYPITVRQVVQM FT GLFPRVGWFKRLSGEHKELVDASLARVGIADLAKRHISELSGGQRRRVFVARILAQQPD FT IYLLDEPFAGVDAASEKVIRGVLHELRDAGKSVVIVHHDLSTVEELCDHVTIINREVLA FT SGPVSEVFTRETVNKAFGLGLL" FT misc_feature 142778..143392 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 142781..143329 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 142787..142864 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 142802..142825 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 143102..143146 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 143102..143317 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 143404..144303 FT /transl_table=11 FT /locus_tag="DIP0171" FT /product="Putative membrane protein" FT /note="Similar to Bacillus subtilis probable metal FT transport system membrane protein YtgC SW:YTGC_BACSU FT (O35024) (435 aa) fasta scores: E(): 3.1e-22, 33.91% id in FT 286 aa, and to Treponema pallidum zinc transport system FT membrane protein TroC or TP0165 SW:TROC_TREPA (P96118) (298 FT aa) fasta scores: E(): 1.5e-21, 35.69% id in 297 aa" FT /db_xref="GOA:Q6NK66" FT /db_xref="InterPro:IPR001626" FT /db_xref="UniProtKB/TrEMBL:Q6NK66" FT /protein_id="CAE48675.1" FT /translation="MSLIEFLSEFSFRRVVLGTMLIGLCSGAMGTFLYLRRQSMMSDVI FT GHSATPGVMGSFLLFSTVPVLAGSQLLAQWGIDARSMPVITVGALITGLASALLADKVA FT ATTRIGIDATMAVMLSLFLGGGLILLQIIQSGRYKGKGGIDELMFGNAATLTNLDVRTL FT AVVSVVILGVIVALWRPFTLLVFDPVLARMSGMPRWINGVLFVIITLGMVIGVKAVGLI FT LMIAFAVFPPAAARQWSRTALQMVVASALIGGASAVLGTYISISVGKVPTGPVIVLVLA FT AIVLVSMVLSPRRSGVSA" FT misc_feature 143428..144276 FT /note="HMMPfam hit to PF00950, ABC 3 transport family" FT misc_feature order(143446..143514,143533..143601,143644..143703, FT 143740..143808,143893..143961,143998..144093, FT 144136..144204,144223..144276) FT /note="8 probable transmembrane helices predicted for FT DIP0171 by TMHMM2.0" FT CDS 144300..145151 FT /transl_table=11 FT /locus_tag="DIP0172" FT /product="Putative membrane protein" FT /note="Similar to Treponema pallidum zinc transport system FT membrane protein Trod or TP0166 SW:TROD_TREPA (P96119) (367 FT aa) fasta scores: E(): 3.4e-27, 35.97% id in 278 aa, and to FT Bacillus subtilis YtgD TR:O34500 (EMBL:AF008220) (295 aa) FT fasta scores: E(): 2.8e-25, 35.92% id in 270 aa" FT /db_xref="GOA:Q6NK65" FT /db_xref="InterPro:IPR001626" FT /db_xref="UniProtKB/TrEMBL:Q6NK65" FT /protein_id="CAE48676.1" FT /translation="MTFAVSVSLLALVVALTAAIPGVVLVLRRQAMLSDALSHAVLPGI FT AVGALWTTNPNSPILLIGATLSGVLVMALTEWVRGRKRVTEDSATGLIFPAFFAIGVIL FT ISTKFNRSSISEHTVLVGDLNISAMQHLVVGTIDFGPKSAWIIGAVGLLTLALLLVAKR FT PLAISTFDPVFARTVGIRTRLINYLVMTMVSLTIVVVFDAAGAVLAVALMIVPAATALM FT IASSEGAMLLVTLVVAAVSSQAGFWVAYRLDAATSPTMAFVDGLIFLAVWGIIRARRRL FT RC" FT misc_feature 144300..144392 FT /note="Signal peptide predicted for DIP0172 by SignalP 2.0 FT HMM (Signal peptide probability 0.990) with cleavage site FT probability 0.427 between residues 31 and 32" FT misc_feature 144306..145124 FT /note="HMMPfam hit to PF00950, ABC 3 transport family" FT misc_feature order(144312..144380,144474..144533,144567..144620, FT 144729..144782,144849..144902,144912..144971, FT 144990..145049,145059..145127) FT /note="8 probable transmembrane helices predicted for FT DIP0172 by TMHMM2.0" FT CDS 145272..146273 FT /transl_table=11 FT /locus_tag="DIP0173" FT /product="Putative membrane protein" FT /note="Similar to Neisseria meningitidis putative FT periplasmic binding protein NMA0789 SWALL:Q9JVL4 FT (EMBL:AL162754) (308 aa) fasta scores: E(): 2.7e-24, 31.71% FT id in 309 aa, and to Treponema pallidum periplasmic FT zinc-binding protein TroA or TroMP1 or TP0163 FT SWALL:TROA_TREPA (SWALL:P96116) (308 aa) fasta scores: E(): FT 2.5e-16, 33.12% id in 317 aa, and to Streptococcus pyogenes FT zinc-binding protein precursor AdcA or SPY0714 SWALL:Q9A0L9 FT (EMBL:AE006523) (515 aa) fasta scores: E(): 2.5e-16, 28.85% FT id in 298 aa Note: Also similar to the upstream DIP0169, FT (321 aa) E(): 4.5e-38; 56.798% identity in 331 aa overlap" FT /db_xref="GOA:Q6NK64" FT /db_xref="HSSP:1K0F" FT /db_xref="InterPro:IPR006128" FT /db_xref="UniProtKB/TrEMBL:Q6NK64" FT /protein_id="CAE48677.1" FT /translation="MAATGLVAAAGCSTTDSGTSASGTSSAAKSDTLKIFATTSYIGDA FT VKNIAPDADLTVMVGPGGDPHTYQPSTADLEAMQNADAVIWSGLGMEANMIDQLRGLGD FT KQIAVAEQLPESQLLPWVEEDEHDHDHGDAHEHGHEGEDAHGHHHESQWDPHVWNSTDN FT WKLVVDQIVKKLSAADSANADTYKANGEKYNKQIDEAKAYVQAKIDTIPQDQRTLVSGH FT DAFRYFGKQFGLEVKATDFVTSDAERSANELEDLATFIVEHHVPVIFQDASANPQAVKS FT LEENVAKKGGKVKVVDKELYSDSLGADAPADTYIGALKYNADTIAEAFSSTR" FT misc_feature 145272..146261 FT /note="HMMPfam hit to PF01297, Periplasmic solute binding FT protein family" FT misc_feature 145365..145421 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 145365..145430 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 145455..145496 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 145494..145547 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 145650..145739 FT /note="ProfileScan hit to PS50316, Histidine-rich region." FT misc_feature 146193..146249 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature complement(146333..148033) FT /note="Putative O-antigen export system" FT CDS complement(146339..147118) FT /transl_table=11 FT /locus_tag="DIP0174" FT /product="Putative ABC transport system, ATP-binding FT protein" FT /note="Similar to Mycobacterium leprae putative ABC FT transporter ATP-binding component ML0114 SWALL:Q9CDA0 FT (EMBL:AL583917) (272 aa) fasta scores: E(): 2.3e-60, 74.4% FT id in 254 aa, and to Xylella fastidiosa ABC transporter FT ATP-binding protein XF2568 SWALL:Q9PAF0 (EMBL:AE004064) FT (246 aa) fasta scores: E(): 1.4e-34, 45.93% id in 246 aa" FT /db_xref="GOA:Q6NK63" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:Q6NK63" FT /protein_id="CAE48678.1" FT /translation="MVSIDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNKDNTVVV FT EALRDVNLHLREGDRIGLVGHNGAGKSTLLRLLSGIYEPTRGSAHVRGRVAPVFDLGVG FT MDPEISGYENIVIRGLFLGQTRKQMKQKMDEIADFTELGDYLSMPLRTYSTGMRIRLAL FT GVVTSIEPEILLLDEGIGAVDAAFMAKARERLSDLVKRSGILVFASHSNDFLVQLCDSA FT LWVDHGTIRQAGPVADIVEAYEGKEAADHIRRLQARM" FT misc_feature complement(146426..146950) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(146435..146947) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(146447..146662) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(146864..146941) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(146903..146926) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(147137..147997) FT /transl_table=11 FT /locus_tag="DIP0175" FT /product="Putative ABC transport system, permease protein" FT /note="Similar to Mycobacterium leprae putative ABC FT transporter component ML0112 SWALL:Q9CDA2 (EMBL:AL583917) FT (276 aa) fasta scores: E(): 1.2e-60, 55.23% id in 277 aa, FT and to Xylella fastidiosa ABC transporter permease protein FT XF2567 SWALL:Q9PAF1 (EMBL:AE004064) (267 aa) fasta scores: FT E(): 5.2e-37, 36.5% id in 263 aa" FT /db_xref="GOA:Q6NK62" FT /db_xref="InterPro:IPR013525" FT /db_xref="UniProtKB/TrEMBL:Q6NK62" FT /protein_id="CAE48679.1" FT /translation="MVARITNTDTTADEPSQSKTLAAAWADLVRGFSQRELWLQLGWQD FT IKQRYRRSVLGPLWITIATGVMALALGLLYSVLFKIPVAQFLPHVTVGLIMWNFIAGCI FT KEGSEVFIANEGLIKQLPSALSVHVYRLVWKQTLFLMHNMVIWVILMAIFPRPLGWDIL FT LGIPALALLIANGVWVTMFFGIVATRYRDFSPLLEALTQLLFYVTPIVWTTETLYSQGG FT AVSERAKLAMLNPLYHYMEVIRAPLIGAPIHPLNWIVVGCCTVIGLFIAMLAMRQWRFR FT VSYWV" FT misc_feature complement(147149..147916) FT /note="HMMPfam hit to PF01061, ABC-2 type transporter" FT misc_feature complement(order(147176..147241,147362..147418, FT 147440..147505,147518..147583,147689..147754, FT 147767..147832)) FT /note="6 probable transmembrane helices predicted for FT DIP0175 by TMHMM2.0" FT CDS 148133..149326 FT /transl_table=11 FT /locus_tag="DIP0176" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0117 TR:Q9CD97 (EMBL:AL583917) (398 aa) fasta scores: FT E(): 8.1e-38, 35.73% id in 417 aa" FT /db_xref="GOA:Q6NK61" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/TrEMBL:Q6NK61" FT /protein_id="CAE48680.1" FT /translation="MAFDVARVRGAYTSITGGWTYMNAQQQAQIPERVAAAVARGFRNS FT PIVEDVEPAFGSHARERHAGLFASDGYERSARVAIADLTGTSADAVILGPNLEVLFSQF FT AAAVWPLVRRGSSVVMAHGCSPAMTVGAKTRWAQPDLGTGEIPAWQFGSLVDGSTRLVA FT LRAADPQVGTINPIREISEYVHGASRAWLLVDASSLAGHRPITMEALGADIVALDCSAF FT GGPQVAALAFRDATMFPRLDADLLNSSVAPGLAAGVSAAVDHIADLDESVRGTRRNRLV FT DSIESAGLYLGRLGTYLADSLDSLPKTHVFGVTGEAAAGSDADRIPHVTFCIDGVPADL FT IYHRLLSNRIVGALSASSPLLDAMGAEDTHGTISLALAPFNTTHDVDQLMRVVASFA" FT CDS complement(149323..150270) FT /transl_table=11 FT /locus_tag="DIP0177" FT /product="Putative quinone oxidoreductase" FT /note="Similar to Streptomyces coelicolor putative quinone FT oxidoreductase SCGD3.24c TR:Q9XA55 (EMBL:AL096822) (326 aa) FT fasta scores: E(): 1.4e-57, 53.87% id in 323 aa" FT /db_xref="GOA:Q6NK60" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q6NK60" FT /protein_id="CAE48681.1" FT /translation="MRAIYVQDDATLAVHDAPTPTLQPGEVLVQVKAAGVNRADLLQAA FT GHYPPPPGESEIIGLECAGVIVDAGTTSRNVGDKVACLLAGGGYAEYVAVPEGQLMPIP FT EGYSFAEAAAVVEVAATVWSNIGMLTGLKPEHMFLIHGGAGGIGTFAIQLAKHVGATVA FT VTAGSKEKLETCRELGADILINYREEDFAEVLKNKCDRILDIMGAKYLDQNVRALAMDG FT HQVTIGMQGGVKGELNIGRLLSKRGTISATALRARDREDKARIVASTVENVWPLLADGT FT IRHHIHATLPLEQAQRAHEMLKNGEVTGKLVLEV" FT misc_feature complement(149326..150240) FT /note="HMMPfam hit to PF00107, Zinc-binding dehydrogenases" FT tRNA 150357..150441 FT /gene="tRNA-Ser" FT /product="transfer RNA-Ser" FT /anticodon=(pos:150391..150393,aa:Ser) FT /note="tRNA Ser anticodon TGA, Cove score 51.94" FT stem_loop 150507..150590 FT /note="Score 72: 28/31 (90%) matches, 0 gaps" FT CDS complement(150627..151661) FT /transl_table=11 FT /locus_tag="DIP0178" FT /product="Putative aminotransferase" FT /note="Similar to Streptomyces coelicolor putative FT histidinol-phophate aminotransferase SCD78.11 TR:Q9ZBY8 FT (EMBL:AL034355) (359 aa) fasta scores: E(): 6.9e-55, 49.85% FT id in 345 aa, and to Streptomyces tendae NikT protein FT TR:Q9F2E4 (EMBL:AJ250581) (440 aa) fasta scores: E(): FT 1.1e-42, 42.9% id in 324 aa" FT /db_xref="GOA:P61004" FT /db_xref="InterPro:IPR015421" FT /db_xref="UniProtKB/Swiss-Prot:P61004" FT /protein_id="CAE48682.1" FT /translation="MIRKDLSQIPTYVPGKRNDHALKLSSNEVTHRPLPSAAQAMAEAA FT AGANRYPDMGVTELRGALSEHLGVPAEQIAVGCGSSALCQQLVQITCTPGDEVVFPWRS FT FEAYPIFVQVVGATPVAVPLTSDGFNDLDAMAAAITPKTKLVFVCNPNNPSGTVVRREA FT FLEFMAKVPADVVVALDEAYTEYVRDEDTIFATEILSEFPNLVGLRTFSKAFGLAGVRV FT GYAFGPHELIDALNKVALPFGVNAVGQAGALASLNNLDELMEHTEEVVAVRDRVADHIG FT AAHSQANFVWIPAESRSETPFEIAEKLAAHDVLVRAFPEGVRITVTNEEESDRLLAAWD FT ASFA" FT misc_feature complement(150633..151469) FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II" FT misc_feature complement(150978..151052) FT /note="FPrintScan hit to PR00753, FT 1-aminocyclopropane-1-carboxylate synthase signature" FT misc_feature complement(151005..151034) FT /note="ScanRegExp hit to PS00599, Aminotransferases FT class-II pyridoxal-phosphate attachment site." FT misc_feature complement(151170..151244) FT /note="FPrintScan hit to PR00753, FT 1-aminocyclopropane-1-carboxylate synthase signature" FT tRNA 151769..151857 FT /gene="tRNA-Ser" FT /product="transfer RNA-Ser" FT /anticodon=(pos:151803..151805,aa:Ser) FT /note="tRNA Ser anticodon GCT, Cove score 42.39" FT tRNA 151905..151977 FT /gene="tRNA-Arg" FT /product="transfer RNA-Arg" FT /anticodon=(pos:151938..151940,aa:Arg) FT /note="tRNA Arg anticodon ACG, Cove score 77.20" FT CDS 152426..154000 FT /transl_table=11 FT /locus_tag="DIP0179" FT /product="Putative membrane protein" FT /note="Similar to Staphylococcus aureus subsp aureus Mu50 FT hypothetical 57.2 kDa protein SAV1916 TR:BAB58078 FT (EMBL:AP003363) (520 aa) fasta scores: E(): 3.6e-71, 41.38% FT id in 505 aa, and to Helicobacter pylori sodium-dependent FT transporter HP0214 TR:O25003 (EMBL:AE000541) (552 aa) fasta FT scores: E(): 9.3e-34, 50.45% id in 555 aa" FT /db_xref="GOA:Q6NK59" FT /db_xref="InterPro:IPR001898" FT /db_xref="UniProtKB/TrEMBL:Q6NK59" FT /protein_id="CAE48683.1" FT /translation="MSTPITHESSSHALAEDAEVHGKNENRRQFTGLFAGLILAVLIYL FT VFPESSVDMVQGVDPDGEYSYNALRITAAIAVLMGAWWMTEAIPLAATALVPLVAFPVL FT QVIPFAKISAPYASPTIFLFMGGFILALGMQRWNLHRRLALSVVLLVGTKPKQLIAGFM FT LATGFLSMWVSNTATAVVMLPIGVSVLQLTAESVGGMKAQKKFATALMLAIAYSASIGS FT LGTIIGTPPNALMVAYMAENHDIHIGFGTWMLVGVPLAIVYMAIAWLVLVSVFKPEVDS FT IPGGREMIKSELAKMGSMKFGEAATAVIFTGAALSWVFVPLLIDVFQWKVEIADAAIGL FT IASMLLFMIPADRKTGVRLTDWKTANELPWDVLLLFGGGLALSKMFSDSGLSLWIGEIA FT KGLVSLPLILLIAAIAALVLLLTEFTSNTATAATFLPIMAGVAVGIGLNANGDQNILLL FT TIPVALSATCAFMLPVATPPNAIAYGSGHVRIGDMVKGGVWLNLIGVVLVTLATYFLAI FT PVFNIVL" FT misc_feature order(152513..152569,152627..152680,152684..152752, FT 152765..152824,152915..152983,153041..153109, FT 153170..153238,153335..153403,153422..153481, FT 153539..153607,153626..153694,153707..153766, FT 153785..153853,153917..153985) FT /note="14 probable transmembrane helices predicted for FT DIP0179 by TMHMM2.0" FT misc_feature 152672..153979 FT /note="HMMPfam hit to PF00939, Sodium:sulfate symporter FT transmembrane region" FT tRNA 154077..154149 FT /gene="tRNA-Arg" FT /product="transfer RNA-Arg" FT /anticodon=(pos:154110..154112,aa:Arg) FT /note="tRNA Arg anticodon ACG, Cove score 77.20" FT misc_feature 154153..190718 FT /note="Corynephage" FT CDS 154365..154994 FT /transl_table=11 FT /locus_tag="DIP0180" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK58" FT /protein_id="CAE48684.1" FT /translation="MGELDTADRLLEKSKEAFALAVELYNRPTLKYHAESCSIFLCNAW FT ELMLKSYIIRKYGIDEIYYDDGDKTIALTDCLKKVFTNDKDPLRINMAELIRFRNTNTH FT FITDEYEIFYGPFLQMSVNNYADKLFELHGQSVSDLIPENHLTLAVKRGAIEPEVIRAK FT YEPHVAKKLLSLSKQAADAAGDGNSGRVAAIYETNFRLVKRQGMRI" FT CDS 155099..155371 FT /transl_table=11 FT /locus_tag="DIP0181" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK57" FT /protein_id="CAE48685.1" FT /translation="MNKRLKKAKVQIQFRDSKKNKFTSHDFQLFIKAYAMKGDPRFSHD FT RKASNEVNPSWTYSQQAIKHIADELIKDPEKCLDRLKFAVSKKNN" FT CDS complement(155600..156826) FT /transl_table=11 FT /locus_tag="DIP0182" FT /product="Putative phage integrase" FT /note="Similar to Mycobacterium phage MS6 Integrase Int FT TR:O55248 (EMBL:AF030986) (372 aa) fasta scores: E(): FT 1.5e-09, 26.48% id in 370 aa" FT /db_xref="GOA:Q6NK56" FT /db_xref="HSSP:1A0P" FT /db_xref="InterPro:IPR002104" FT /db_xref="UniProtKB/TrEMBL:Q6NK56" FT /protein_id="CAE48686.1" FT /translation="MATVRDLWTKRNPNTTSKTKRIRSARWGVGKRWQAVWIENGREAT FT KTFETRDEAELWAARAEVGKADGTWITKDKVDITLSDLWEPWIASKGNISDKTKRDYLS FT YWNVHIRPQWGQTPCAHIQRSVINAWIPTLSTMKGVPASQPPRPLSESAMRKVGLIIHG FT ILDLAVELGVIHQNPIRTGDLPKQKKSERRYLKITEVDELIRQAPTEQAKLLLRVLIMT FT GLRPGEAKGLKVKDLDPVRGRLMIRRDVDDLGHEDSTKTRNHRDVPIGGEILLLLDRYA FT QGKDPDSWLIPDERGKVWTTSRWRVVWKNLCIWTGIGDLDTYELRHTAASIAIAAGADV FT KTVQLMLGHSSAAMTLDIYAHLWEEGLDAIPGAMEAHMESERKRAEEASTVHEASEAER FT RRAQFKVIG" FT misc_feature complement(155720..156307) FT /note="HMMPfam hit to PF00589, Phage integrase family" FT CDS complement(156926..157948) FT /transl_table=11 FT /locus_tag="DIP0183" FT /product="Putative transcriptional regulator" FT /note="Similar to Streptococcus pneumoniae transcriptional FT regulator SP1809 TR:AAK75882 (EMBL:AE007473) (383 aa) fasta FT scores: E(): 8.2e-14, 29.35% id in 310 aa" FT /db_xref="GOA:Q6NK55" FT /db_xref="InterPro:IPR006025" FT /db_xref="UniProtKB/TrEMBL:Q6NK55" FT /protein_id="CAE48687.1" FT /translation="MPTLSSNLKHLRLLLGRSQGEFAEQLGIAQSTLSSVERENRPPST FT KLINTARFQTGVSAEYFEASIHFYAAPDLLFRSAREGRANADKIAAAFSIAEHYLRERY FT PDVTSDLPTIPIADLEGELSLRMLEEFASQTRDHFGIDQDSMIPNLTTVLNNHGILVTS FT LPDYVVEGTNFDGVSTPTDSTLRIIALNQQRSGDRYRFSLAHELAHLILHANTLRSDKS FT QMEKEANIFAASFLMPRALLTPVITPELTLKDYAELKAQWGYSIQAIVRRAHELELIDY FT KRYRSLRMQIAGRGWNINEPVDVLLENVYIDPIDLLSNNIKKHQSTNEGLATVTSLHKQ FT " FT misc_feature complement(157316..157345) FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT misc_feature complement(157763..157927) FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT misc_feature complement(157763..157930) FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature complement(157835..157900) FT /note="Predicted helix-turn-helix motif with score 2114 FT (+6.39 SD) at aa 17-38, sequence RSQGEFAEQLGIAQSTLSSVER" FT CDS complement(157960..158523) FT /transl_table=11 FT /locus_tag="DIP0184" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK54" FT /protein_id="CAE48688.1" FT /translation="MAHTTGENLFTMKRVLRNLEADHDALREALADGRRMRDLLPYGDY FT INRYRNLTRDPMVVAIHKQFHESGLGGLTIDESMFPLSLRFEDDDVTLVFRRPEGFRHG FT TNEESSQRPLIERRSRIVLFWKYAEPGTDALKRISLQMFDNEGPLEEATMLSEKIPLLT FT KPESLTTAMFIPTHADEPRFVFGS" FT CDS complement(158618..159025) FT /transl_table=11 FT /locus_tag="DIP0185" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR010359" FT /db_xref="UniProtKB/TrEMBL:Q6NK53" FT /protein_id="CAE48689.1" FT /translation="MSPVEAALETLAHTMGITVIETSKLGSTLNACFHPPTQTIFIKIG FT LDPVTRRCAIAHELGHAHYGHNCSTPGAERQADEWAAQQLLDVGDVEAVGLECEGSAAA FT MAAELGVTPHLLVLWMGMYERGRIQPEKRAC" FT CDS complement(159035..159196) FT /transl_table=11 FT /locus_tag="DIP0186" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK52" FT /protein_id="CAE48690.1" FT /translation="MDTRRKAKRGNNSPTAPPHVTEPDYDAILDGINAGTEPIAAQKAT FT DPLEENYT" FT CDS 159639..159881 FT /transl_table=11 FT /locus_tag="DIP0187" FT /product="Putative transcriptional regulator" FT /note="Similar to Pyrococcus abyssi repressor protein, FT putative PAB7155 TR:Q9V101 (EMBL:AJ248284) (73 aa) fasta FT scores: E(): 0.002, 36.06% id in 61 aa" FT /db_xref="GOA:Q6NK51" FT /db_xref="InterPro:IPR001387" FT /db_xref="UniProtKB/TrEMBL:Q6NK51" FT /protein_id="CAE48691.1" FT /translation="MNMANVKIKIRDGLIDRLRNMSGITSDEAFARTIGTSRSTLVDVK FT TGEREPSLAFAIGIAQAFGLGLSEIVTWETETTAA" FT misc_feature 159678..159848 FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature 159681..159848 FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT CDS complement(160120..160446) FT /transl_table=11 FT /locus_tag="DIP0188" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK50" FT /protein_id="CAE48692.1" FT /translation="MSKVVLVYGGQRYTLATSDVASVHFRITERLNHSAHYRDRLDRRP FT FGQEQGSLQDFPGGPLLEQFDPFEVFELADGGEVWVACYDGVDLALETEQRTKDFFEPY FT RDQR" FT CDS 160470..160961 FT /transl_table=11 FT /locus_tag="DIP0189" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK49" FT /protein_id="CAE48693.1" FT /translation="MQSLFRLRVKGTPLVELRVVPFEKDRFTIVHADVKDPVTVHAVTI FT EEIHNLMTLLFRQTLRNLGVSRIGKDELDVVIRLDPQARETGRPKVKRYTALVEGIHSV FT GDPGERPVRHLVFVTVDIQRESFIAHTKRVIRRIKHDSRFHRKMKHLSERRKRDGIKTI FT " FT CDS 160942..161760 FT /transl_table=11 FT /locus_tag="DIP0190" FT /product="Putative anti-repressor protein" FT /note="Similar to Staphylococcus aureus prophage phiPV83 FT antirepressor TR:Q9MBT0 (EMBL:AB044554) (265 aa) fasta FT scores: E(): 1.5e-32, 42.8% id in 257 aa" FT /db_xref="GOA:Q6NK48" FT /db_xref="InterPro:IPR005039" FT /db_xref="UniProtKB/TrEMBL:Q6NK48" FT /protein_id="CAE48694.1" FT /translation="MELKPFNFRGHNVRVLVAENGEPLWVGRDVCAVLEIKNSRDALSR FT IDPEGVGIADTLTPGGIQKLKVVNESGLYELLFQSRVPQAKEFRRWVTGEVLPEIRRHG FT MYATTATVEQMLADPTTAIKLLEQIKQERDQRRALEVQAAIDKPKVMFADAVAEANTDI FT LVRDLAKILRGNGIEVGGNRLFAWLRKHKYLMDGPSHIKHTPTQKAMELGLFKIKETVV FT TRSDGRSSITVTPKVTGKGQRYFVERFLDGRFDINDIKTNKNRPVAAGRK" FT misc_feature 160942..161235 FT /note="HMMPfam hit to PF02498, BRO family, N-terminus" FT CDS 161977..162219 FT /transl_table=11 FT /locus_tag="DIP0191" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK47" FT /protein_id="CAE48695.1" FT /translation="MTMRTYKNPYPDSEDAVEIRFDHCREDIAKAAQEYWREMTEAELD FT DLQEEIMRALAVSEWQNIWLTSAAFITVLAYHFHD" FT CDS 162231..162455 FT /transl_table=11 FT /locus_tag="DIP0192" FT /product="Putative exported protein" FT /note="No significant database matches. Possible exported FT protein" FT /db_xref="UniProtKB/TrEMBL:Q6NK46" FT /protein_id="CAE48696.1" FT /translation="MILLVLINIVFSMLLLFNLTDANRKIEDATKRLDMLNEDVDVQSV FT KILDLYGIAQIPPMPDEEAASRIFTEVRR" FT misc_feature 162231..162302 FT /note="Signal peptide predicted for DIP0192 by SignalP 2.0 FT HMM (Signal peptide probability 0.644) with cleavage site FT probability 0.635 between residues 24 and 25" FT CDS 162452..162598 FT /transl_table=11 FT /locus_tag="DIP0193" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK45" FT /protein_id="CAE48697.1" FT /translation="MNRTALEELHQALISEAEAMRTGEYFLGAGIVDAYAHQLREAIDS FT HDE" FT CDS 162606..162875 FT /transl_table=11 FT /locus_tag="DIP0194" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK44" FT /protein_id="CAE48698.1" FT /translation="MCKHCGAAVLFVKDDRWHVFDAKPSEEGEWRIRSRWAANVAAEKT FT TVTRLTESKLRRARLMGEPLFRPHFQTCPANPRAKILQEKRRHG" FT CDS 162868..163017 FT /transl_table=11 FT /locus_tag="DIP0195" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK43" FT /protein_id="CAE48699.1" FT /translation="MDDASIADEWWENLPERRKIQIHHWIVSPRQITIQELPGQIALIE FT GTEQ" FT CDS 163014..163457 FT /transl_table=11 FT /locus_tag="DIP0196" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK42" FT /protein_id="CAE48700.1" FT /translation="MTKTQLVCDKNQLNWGLKAAKAIAGKSPYDVVQMRVSPDRDYLYI FT CAVNAEATLVAKVELLVANISSEEDEIITIDKAKIPALILATAETGKKSEDSRPMAGIC FT IRGKEVDFTDENGAGRGVDLTTIHRNDSAEIGDPVRTIIRVKQ" FT misc_feature 163071..163094 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 163482..163715 FT /transl_table=11 FT /locus_tag="DIP0197" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK41" FT /protein_id="CAE48701.1" FT /translation="MTPSPAQITELARATRYLGGNPTLSMRSYMHEGTESHRLVAEATF FT WTLSVLNVPEALLETEKDKANIVDAAPIGGIS" FT CDS 163814..164122 FT /transl_table=11 FT /locus_tag="DIP0197A" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK40" FT /protein_id="CAE48702.1" FT /translation="MLERHKIARKKCMTCTLLAECEKMLSDFEKEELRVDGVVAGRYCD FT VSHRNGSSIDVLRHCKHCNVRLIPQGGPRGKEPSGARKHRGEGLCAVCYPLFSRKQR" FT CDS 164151..165359 FT /transl_table=11 FT /locus_tag="DIP0198" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK39" FT /protein_id="CAE48703.1" FT /translation="MAWSRVGDNIATHPLMSRLLTSCEFDHSLKNEAFGALVQLTTVSA FT AHLTDYIIEYGLMAQIAPGREKQLIDVLVDAGMLFRDEVDGRKVLRIVDDNELLHNRSR FT DEVEIDRRRAADKRNPALIPAVRYRDGDQCRWCGRTVDWRDRKGGRAATIDSLNEHRES FT TVDTLVVACKSCNSKRGAGEELQLLPTPTREKVHYTDHTIDWINRSEWAQHEGIHLEPR FT QTHLDIGQQITTPAAPSEQQQVGQAAAPLEAAARAHRAAPDVEAPFVSDPLDEAPDWVK FT QSLVNDHGQAAAPLMAAAPREHDHAPAAPSEQQQVGQAAAPLEAAARAHRAAPDVEAPP FT QHHVDNETVKPSTDLEQITDRWGDGSRSLGTGRDGNGQVGTARRRRRRRRGGRGTGRNK FT AHG" FT misc_feature 164889..165149 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature 165297..165341 FT /note="ProfileScan hit to PS50323, Arginine-rich region." FT CDS 165352..165966 FT /transl_table=11 FT /locus_tag="DIP0199" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK38" FT /protein_id="CAE48704.1" FT /translation="MDSWKLHSLGKALYELEKLGPLLDDLLLPSQCGYSEGRGGSGQGS FT RPPLRIPILDVKWETERLLSYWSARLAVRLQLVPPRARSVAISAAWLQRHLIEIEPDPE FT FDQAAEQIIEQARIIDAMFTEDATPDEDMEGTCREIASACRRLGYEISKTTVHRWAREE FT TISSKTMEDGRVIVSLQEVIGKLTACDNEEVVDSGTPNIVS" FT CDS 166018..166335 FT /transl_table=11 FT /locus_tag="DIP0200" FT /product="Putative phage protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR003615" FT /db_xref="UniProtKB/TrEMBL:Q6NK37" FT /protein_id="CAE48705.1" FT /translation="MHQRCNTRGGQDMGFDSRAAKKLKAMFKQQCRDAGAVCWLCGQPI FT NYDAPPNSRDSFEPDHFYPQATHPELAEDPENLRPSHCSCNRSRKDGVPAPSLGSLSEQ FT W" FT misc_feature 166093..166278 FT /note="HMMSmart hit to SM00507, HNH nucleases" FT CDS join(166479..166829,166831..168423) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0201" FT /product="Putative phage terminase (pseudogene)" FT /note="Pseudogene. Similar to Bacteriophage BFK20 FT hypothetical 75.6 kDa protein TR:Q9MBK4 (EMBL:AJ278322) FT (679 aa) fasta scores: E(): 6e-79, 40.76% id in 677 aa. FT Presents a frameshift at residue 117" FT /db_xref="PSEUDO:CAE48706.1" FT misc_feature 168319..168405 FT /note="ProfileScan hit to PS50312, Aspartic acid-rich FT region." FT CDS 168436..169686 FT /transl_table=11 FT /locus_tag="DIP0203" FT /product="Putative phage protein" FT /note="C-terminal region similar to Bacteriophage BFK20 FT putative portal protein TR:Q9MBK2 (EMBL:AJ278322) (215 aa) FT fasta scores: E(): 1e-40, 56.45% id in 209 aa, and FT N-terminal region to Bacteriophage BFK20 hypothetical 24.1 FT kDa protein TR:Q9MBK3 (EMBL:AJ278322) (213 aa) fasta FT scores: E(): 3.8e-29, 41.79% id in 201 aa. Note: It seems FT these two bacterophage proteins have been fused into FT DIP0203" FT /db_xref="InterPro:IPR006427" FT /db_xref="UniProtKB/TrEMBL:Q6NK36" FT /protein_id="CAE48707.1" FT /translation="MGFLQRIGLLPQVTTTPTQHELLAPLLDTYIGVVTEMPTEELFAE FT QPHLRTVTTFIARAISSTSLHVYRRDSDGGRHRVRDSDLAKLMRRSSKTELMQDMLNGS FT ILDLCLYDEFIWVAMEDSDSGEWELHRIPPTWIKQRKHSDPWTLEWMGIIDAKTGQQIK FT IPAERIIHVHGYNPTSTSRGLTPVVALRETLKEQLESAAYRGQLWRNGPRLGGVITRPK FT DAKWDSTSRKRFKAAWQSQYSGRGSGAGGTPILEDGMQFVPAHLKAQDEQVVEMTKLSL FT QTVASIYHVNPVMVGLLDNANYSNVREFRRSLYGDSLGPIIKQVEGVINEFLRPMIDDD FT DAVYVEFNLDEKLRASFEEKAAVTSTAVGGPWMTRNEARAMNNLPAIDGGEDLITPLNV FT TTENSESNNDVGLEEES" FT CDS 169683..170726 FT /transl_table=11 FT /locus_tag="DIP0204" FT /product="Putative phage prohead protease" FT /note="C-terminal region similar to Bacteriophage BFK20 FT putative prohead protease TR:Q9MBK0 (EMBL:AJ278322) (204 FT aa) fasta scores: E(): 1.1e-35, 66.46% id in 164 aa, and FT N-terminal region to Bacteriophage BFK20 hypothetical 18.4 FT kDa protein TR:Q9MBK1 (EMBL:AJ278322) (176 aa) fasta FT scores: E(): 6.2e-14, 51.06% id in 94 aa. Note: It seems FT these two bacterophage proteins have been fused into FT DIP0204" FT /db_xref="GOA:Q6NK35" FT /db_xref="InterPro:IPR006433" FT /db_xref="UniProtKB/TrEMBL:Q6NK35" FT /protein_id="CAE48708.1" FT /translation="MTIHVVIGPPCSGKSSFVEANAPAGIGRFDFDNIAGTVAGQDVKN FT ASPNPVANAVLAMRRGLMGWLLDVELDPPEFWLINAQPSPALIAALSARGATFHLCDPG FT MEECLARAARDGRPQSVEDRIRQWYDNPPELPTKGGHEVKTKSYDVSIDETQTEGTITA FT YASVFGNVDSYGDVVIPGAFEETLGEWQKSGNTIPLLYGHDFKDPFSNIGGVTSAVEDA FT HGLKITAQLDLDNPKARQVYNLLKAKRLSQMSFAFDVVEGSWGEREQQEVYELKKVKLY FT EVSVVPIGANQETSIIDVKAVVAEELANMLDSRQLTKSISNKPPKQGAFALSALDAHLS FT ILEKENR" FT misc_feature 169704..169727 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 170723..171973 FT /transl_table=11 FT /locus_tag="DIP0205" FT /product="Putative phage capsid protein" FT /note="Similar to Bacteriophage BFK20 putative major capsid FT protein TR:Q9MBJ9 (EMBL:AJ278322) (428 aa) fasta scores: FT E(): 5e-66, 47.14% id in 420 aa" FT /db_xref="InterPro:IPR006444" FT /db_xref="PDB:2R9I" FT /db_xref="UniProtKB/TrEMBL:Q6NK34" FT /protein_id="CAE48709.1" FT /translation="MNLKDLLAHRENLMDSAKRARSAITDDMDPADAAQAVENVKSIIS FT EIESTDEAIAARRGVSDVTQKLKGLTITERGTENDSAASRSLGEHFVKAAGDRLKNQAA FT GAHIEYSVPEYQVKEDAHSSPKDLVEGWGTFYQRGIINQRRERLVAADLMGAATVTAST FT VKYIVEKANRIASGAPATVAEGTKKPYVKYADFDVVTESLSKVAALAKFTDEMIEDYDF FT VASWINNNLVYDLSVVEEKQLINGDGRGSNIKGLLNREGIQTHKSAKQADWFNDLFKAK FT NKVSQATNLEADGIMINPVNYEALRLTKDGNGQYIAGGPFQGQYGNGNILIDPPLWGIK FT TVVSNAVPAGTAIVGAFRQGATVLRKGGVRVDSANTNADDFENNLVTLRAEERLGLMVP FT LPAAFVKVTLEETTEEL" FT CDS 171973..172173 FT /transl_table=11 FT /locus_tag="DIP0206" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK33" FT /protein_id="CAE48710.1" FT /translation="MRREYEATTPYGQKLTLEMSEDYKNAHWPDAVLLEDTWPAASSFE FT AAETKRKTPTRNRAQKPEADK" FT CDS 172195..172677 FT /transl_table=11 FT /locus_tag="DIP0207" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage BFK20 hypothetical 19.9 kDa FT protein TR:Q9MBJ8 (EMBL:AJ278322) (180 aa) fasta scores: FT E(): 3.6e-16, 38.46% id in 156 aa" FT /db_xref="InterPro:IPR010916" FT /db_xref="UniProtKB/TrEMBL:Q6NK32" FT /protein_id="CAE48711.1" FT /translation="MNAITPTPGIDKEAFDRAANAVRRLCGWHIFPIIEETITLDSPGD FT SLLVLPTKHLVEIINVTIDGTTYPLSDFRSSPDGLLVKRHGRFPRGIAMVTVTMKHGYE FT KPTEILGVINDMARRANESNLTQLNVGGISVGATNSATPQSSEWRIVDELRLGPLP" FT misc_feature 172195..172350 FT /note="ScanRegExp hit to PS00430, TonB-dependent receptor FT proteins signature 1." FT CDS 172674..173036 FT /transl_table=11 FT /locus_tag="DIP0208" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK31" FT /protein_id="CAE48712.1" FT /translation="MSIIFNQRIEIIRAGEKRSVYSSDVMEDWDNPVVLPVEVPVSIQP FT VSSTESDATANRSYVTSRFRLFSPPGIDIPQLKAKDRVRIGLLVLDVVGDPARWPHPLK FT PATVHHVEADLEVHRG" FT CDS 173002..173295 FT /transl_table=11 FT /locus_tag="DIP0208A" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage BFK20 hypothetical 10.2 kDa FT protein TR:Q9MBJ7 (EMBL:AJ278322) (94 aa) fasta scores: FT E(): 2.5e-07, 44.57% id in 83 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NK30" FT /protein_id="CAE48713.1" FT /translation="MWKQIWRCIVGKYDKQFQQLNRNPKIAQALKNRAEKTRAAAQRIS FT DAEGGTAHYRVVSGVRPGGRAYAYVVSDNRDEEFGTEKTKRIGALRRAARGG" FT CDS 173285..173662 FT /transl_table=11 FT /locus_tag="DIP0209" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage BFK20 hypothetical 13.7 kDa FT protein TR:Q9MBJ6 (EMBL:AJ278322) (126 aa) fasta scores: FT E(): 1.5e-11, 37.06% id in 116 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NK29" FT /protein_id="CAE48714.1" FT /translation="MVDEKAVIISKLSKLGFPVYSELPHDFEEKHLPVLWVQHVGPAAR FT RQAINSRGIDYVDLDIDLFVSLDMWHTGAAMELAQTIRTHMHRFREGMLKVLDTGRPEP FT RPDFNSTIRRCGLTITVAVPA" FT CDS 173691..174638 FT /transl_table=11 FT /locus_tag="DIP0210" FT /product="Putative phage protein" FT /note="N-terminal region similar to Bacteriophage BFK20 FT hypothetical 13.9 kDa protein TR:Q9MBJ5 (EMBL:AJ278322) FT (125 aa) fasta scores: E(): 1.3e-21, 50% id in 116 aa, and FT C-terminal region to Bacteriophage BFK20 hypothetical 14.9 FT kDa protein TR:Q9MBJ4 (EMBL:AJ278322) (145 aa) fasta FT scores: E(): 3e-10, 37.85% id in 140 aa. Note: It seems FT these two bacterophage proteins have been fused into FT DIP0210" FT /db_xref="UniProtKB/TrEMBL:Q6NK28" FT /protein_id="CAE48715.1" FT /translation="MTDFDIDTSAANYADELALLGVTGAMSYAPKGTQMPETIAPLNPP FT FVDFGWLSDGGITESQNEERNDWTPFQSTNPIRGQVTKQDFQFKTVVWSISGLANAMYY FT GVPESDMRFDQETGVTTFEQGKELPPDFKFGLVVDIVDGGKARRHCMPNVSVVERGDIV FT YSKDDLVGYEMTFRASYDPVAGYAVRRMFKEGWKPGHAGTTLADENKDASLGDWSNTLD FT ESEVRKQSKTVTLPKGATGGTFTVSINGKASAAINHDATGTAMKLVLNKVDGGESAKVT FT GRAGGPYTITGVEGEITADGTNLTGSDTQDISIN" FT CDS 174736..175113 FT /transl_table=11 FT /locus_tag="DIP0211" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage BFK20 hypothetical 15.7 kDa FT protein TR:Q9MBJ3 (EMBL:AJ278322) (138 aa) fasta scores: FT E(): 3.2e-08, 37.09% id in 124 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NK27" FT /protein_id="CAE48716.1" FT /translation="MTIDLNAMLAKRAEVLGEGNKFDVKLGNKTFYFVAPELASSEWND FT RHQAFLEDIRDGLMTSATAREEFLGLALEDQAEEFAEAADNIGVDPFIIAQMAFQEHAE FT YVGKTQSQKSLNRTQRRAKQR" FT CDS 175275..175484 FT /transl_table=11 FT /locus_tag="DIP0211A" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK26" FT /protein_id="CAE48717.1" FT /translation="MMWEISNLIRITNFLLERSQAKNPNHVKAPKLKLYPWSPDQDIKH FT YGKVDEEDQVDAVNFLLGLSPPPQ" FT CDS 175497..181139 FT /transl_table=11 FT /locus_tag="DIP0212" FT /product="immunity-specific protein Beta241" FT /note="C-terminal region identical to Corynephage beta FT immunity-specific protein Beta241 TR:Q37919 (EMBL:L04258) FT (241 aa) fasta scores: E(): 3.1e-64, 100% id in 241 aa, and FT whole length similar to Staphylococcus aureus subspaureus FT Mu50 phi pvl ORF15 and 16 homologue SAV1955 TR:BAB58117 FT (EMBL:AP003364) (1509 aa) fasta scores: E(): 2.9e-19, FT 23.76% id in 1073 aa" FT /db_xref="InterPro:IPR010090" FT /db_xref="UniProtKB/TrEMBL:Q6NK25" FT /protein_id="CAE48718.1" FT /translation="MDSDATYVPILASFDGFFKSIDKNAEKAGQQAATTFAESMERNLQ FT RAERAAEKAGTVFERAHNRAADAAAKTQIAELKLLEVKEKQGAKASEVAAAEAKVEKAR FT RDQEAADKAVAKAAKSLASAQDDVAKATQQAGDAMEVNAEKAGLFSKMTGGLGDKLGAL FT PALAAGAVAGFAGFVAIKETLLDVGSAFDSAYDTIRIGTGASGEAFAGLQQSMRNVAAN FT NIGIGDDMEAVGTALADINTRLGLTGAPLEKMTAQMLQLQHMGVDADINAVSQALNGFG FT IEADAMPAALDSLFQVSQATGLTITELSNSAVKAGPQLRQFGFSMADSAALVGQLDKAG FT VNADGVLSKMSKALTTFAAEGKDAPKALNETITSIEQLVKAGNSQGAINLAEGIFGAKG FT AEQFVDAVQTGTLSVEDFMSATGATNDTISGLAAETASFKEHWHQFKMQAMLAIEPVAT FT AVFNMLTPAILNLKDGFTSAIEFVENTLVPGFKKIPDVLAVTAQWLDDNRNKLIALAVA FT VSPIVVPFLVGLAAKWTAAGVAATVSAAKQAQAWVLTKIEAAQASAANIAALWTTGAGW FT IKAGAQAILGAGQIAGAWLLTKAQSGVSIVASIAAVGIGWVTTGIQALAGAAQVAAAWV FT IGLGPIAWVTAAIAAVGAGLVWFFTQTETGKQAWQSFTSALQAGWDLFSSALRTGWEML FT KTAVFDAWTVRVETLKSVWEATTGAIGAGWEWLKGALYSGWMWISGNVIEGFKAGLSGL FT RDFFSSVVNGIKSTWATLRSALAKPVNFMINTVYNGGILKAWNVIAGLLPGLKQGNPLA FT GIPEHATGGRIAGPGTGTSDDVLMWGSNGEHMLTAKEVQRAGGHNAIYFMRDLIASRTP FT FTWDGGRFIAEHRKSVNDYGSEVKRRGIGNVDDNGLFSMLPKFKDGGAIRPMWELQLEN FT GHKAAKSRNGNPYTWGYEDCSGYMSAIADAILHGGRGRRAWATGSFPGGQPWAPGLGKG FT FSVGVHDNPGGPGGGHTAGTLTGVGPYSTVNVESGGSHGTVAYGGPAIGADHAQFNGVR FT PGRFHLAIGADGAFETAGSGGVSPQAQRSMIAKAFGGVISTVMDPIAAKLPSPPPAWQT FT IPRGAYDSGKDALVKGVDNAVNSIEDSLATVYRGISKIPNLLKEKGPRGIEKKAKIYDR FT GGILGHGEIAINHGAPERILPPALTASFDKFTTVVPQVADRFGIIADKLLGTKIRETPT FT APGSLNAQVDMEKLNDQLSGLHSMADKVVPVLETVNAMGIEGLKGLTHITGAWKEYVSV FT ENSVAKAAEDSKAANEALATARKELADLEREIAKKGPNAKGQAEDSKKLAEARKKVSDA FT ESKAVDSSSALEKALGDVAVGQIKLALSVVSAIAEIGKAIAGAFTAVYEGQSRGWSLVS FT QMAEEVEKGRQKLSEMRIENANLTIQQIKAINDLRIAQWDTHRAALNGALGIAQAQAEL FT DKRRREGIMLGASGIDAMARAMDRYRKTGIFAIEEVTWYTEEQKRKIKAAEWKVHEARI FT QSAIDQLDAQGKVELAGLAAAEATLKQHTAVRLLELSAQKLSAQAASFYGVTAQGATAL FT ERMNQGKALQGKGAGSIFGGILKGLGGAAGGAAAGFALGGPVGALLGGIAGLLFGGAGQ FT VMNGIAEIKQGRMQESTYKKYAEEELKKLPPEVQKEIHSAGVMGGIASFFGGNGAMIAS FT TPFEAMKIKNQFATWDYEKKLQSMEHDSSIQKQLLATQRAQIEQRLAAQKAALEAERDA FT AGYHAAAGEADNEGVRQAYDALAQDSARRARDLAETAQRGKSQLDEIVGRLKDLADRSA FT ANIINQGINQTVVVKLEKTGRLHTDQDIAKALEETLNAVKGLEARVEMVEAARAPSALE FT AAHSQL" FT misc_feature 175569..176033 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature order(177027..177086,177216..177284,177312..177380, FT 177399..177467) FT /note="4 probable transmembrane helices predicted for FT DIP0212 by TMHMM2.0" FT misc_feature 177084..177455 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature 177252..177287 FT /note="ScanRegExp hit to PS00213, Lipocalin signature." FT misc_feature 178386..178703 FT /note="ProfileScan hit to PS50315, Glycine-rich region." FT misc_feature 180249..180422 FT /note="ProfileScan hit to PS50315, Glycine-rich region." FT CDS 181149..181901 FT /transl_table=11 FT /gene="beta201" FT /locus_tag="DIP0213" FT /product="immunity-specific protein Beta201" FT /note="Similar to the previously sequenced Corynephage beta FT immunity-specific protein Beta201 TR:Q37920 (EMBL:L04258) FT (201 aa) fasta scores: E(): 3.9e-64, 85.64% id in 202 aa. FT Note: there is a frameshift in the already sequenced data FT in from residue 167" FT /db_xref="UniProtKB/TrEMBL:Q6NK24" FT /protein_id="CAE48719.1" FT /translation="MQVMFYSPSGQKLFGENGSPAFLLKGGITDLKGAIEARTTVIPEV FT PGQVFDGVTIKPFTFGVTMVVYPTKEMPMEKAMRKTRQIFSAFDYSTCRIDGTGIPVGL FT KVRLDSIISAPSQDTAKEIAEEITITLAADEGIFWADRKEASGKIDIVNYGDCDLWPEY FT RWQKTTTITLPSGAKINLPETPTPRVLRTTRHQVSITDLDGKPDRELLKKLGTVWPEGV FT PRKETKTYEITQNGYIMWRIGYLDPWGL" FT CDS 181902..182762 FT /transl_table=11 FT /gene="beta286" FT /locus_tag="DIP0214" FT /product="immunity-specific protein Beta286" FT /note="Almost identical to previously sequenced Corynephage FT beta immunity-specific protein Beta286 TR:Q37921 FT (EMBL:L04258) (286 aa) fasta scores: E(): 1.1e-115, 99.65% FT id in 286 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NK23" FT /protein_id="CAE48720.1" FT /translation="MDVSQWEQFAKHRSAVIRDYGMWIGLMDNNMEPIVDMPAPVSIDA FT PITRMTPSSCKAVFKTRVDGHIHPMVDYLIAENLAKVDEQGQLIAAAQDAVFLAIEVAQ FT GIRNVYKGVFTVALGDQESPTLLEFNGVCEIQWTLGALPCPSAPYSWTGKWVDLNQDWA FT GKWSKTRTMADIKVAEVADGFTLSGAADTTIGKLISQSLQAINTMLKSKGRSLPIAVKP FT VTSNPTSPQLVIRPTDRFIWDEISDLALAAGVTVKCKTWWPSDPPVPGLDLKEPIVVIE FT ITQEE" FT CDS 182762..183877 FT /transl_table=11 FT /gene="beta371" FT /locus_tag="DIP0215" FT /product="immunity-specific protein Beta371" FT /note="Almost identical to previously sequenced Corynephage FT beta immunity-specific protein Beta371 beta371 TR:Q37922 FT (EMBL:L04258) (371 aa) fasta scores: E(): 9.9e-126, 89.75% FT id in 371 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NK22" FT /protein_id="CAE48721.1" FT /translation="MDPVIKLVAHAQEMSMTIPRRQACMVYGKLNVTLKKGDVQEERDK FT RVTDGYVHIPEDMPQGRFDFGFTREDADVNIGTGQSTYELALDTAARRITGQVLFEQDI FT IAPGFGDWRPLIDFSCGDLVGVRIWGKELVLPVTSITRETTGWRAHVGGQLINDRRKII FT SENRKILADIESERRERMNEIGAISSVASAASVAAKDADAKAETADGKAEDALEKWRRQ FT KDQLDKVQSDLIEKNTQWNRIQDRGLNELAAQQEAMKRYVDLSRPSSVTVSTWDPVWAG FT PVQVSYPSRNQVELYLKHSPYIIGASVLGIARVNALSGYSFSFTADMTAGQTFTPQVGG FT FESFNQVSVTVHPIVNFAAILSEERRKRGLQ" FT CDS 183877..185304 FT /transl_table=11 FT /locus_tag="DIP0216" FT /product="Putative phage tail fiber protein" FT /note="Low similarity to N-terminal region of Bacteriophage FT lambda side tail fiber protein Stf SW:STF_LAMBD (P03764) FT (774 aa) fasta scores: E(): 0.0021, 24.28% id in 383 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NK21" FT /protein_id="CAE48722.1" FT /translation="MPKLKGSLKNITDKPSTIREVLLRATHTRTNGKTITTSEPVRVKV FT SESGDFTETLAPGAAVLVLVGADFMARESIPLLVAEGMTTIAEAMEAARDFTPDVHDRL FT AELAAETQKNLEEARGVKAEADSATARMREAAQALKDSVDGSIAEATVGIKKSGSELLA FT SMQALQSKAASSESEAKESAQGAEASRSAALASASSASSSAGEAAESLAGLRAKIEEWK FT PHGEQLAQWQPQFEWLKENAASGFTKIAELMQDAAAGVRGELSGLVEQAKTAQTTAGQH FT SLKAQAAAKDAESVANRVVDAAIAKLKGNAPAMLDTLEELAERVISGGTLETEILQKLS FT KMADSDTVKKIVARLDGLTIAGVQGLSAALADKAAARHKHGTSDINGLDTELAGFKGAL FT AEKAPRQHGHTLQEISGLSGAILNVRNELSQKASQQYVNSVETEAKRQYGRIKDISVVN FT SLPASPDAGTIYLVKER" FT misc_feature 184135..184815 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT CDS 185304..185978 FT /transl_table=11 FT /locus_tag="DIP0217" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK20" FT /protein_id="CAE48723.1" FT /translation="MIFYGSSKIKEVFYGDTRIKEVYAGADLVWKRITDTVKFANGGAV FT DFRKAAPEGFKGYLYSDTIRADKDGFYDFHTTGPSGRLCLDDGHGEFAIIPLTRGNDGV FT RVFVRHTDMITFRFNEKNIPITITAKPSTVNDPRRTVVLNYSSTDQIEDSGWGTAIPSA FT RGRGVNLKPGRYWLTSSKSVYINDNWVRAPGGWVDFHSSARSNIRLYYRDVRAYLVPGQ FT KL" FT CDS 186059..187498 FT /transl_table=11 FT /locus_tag="DIP0218" FT /product="Putative phage protein" FT /note="C-terminal region similar to C-terminal region of FT Mycobacteriophage TM4 GP29 TR:Q9ZX49 (EMBL:AF068845) (547 FT aa) fasta scores: E(): 3.7e-35, 49.14% id in 234 aa" FT /db_xref="GOA:Q6NK19" FT /db_xref="InterPro:IPR015020" FT /db_xref="UniProtKB/TrEMBL:Q6NK19" FT /protein_id="CAE48724.1" FT /translation="MNTVIDFSAGVPPAVEVKAAGHIGVMRYISPPRLSWMTAKPATRP FT QIDRCRSAGVDVGFVWQYGGADNPDTMRGRTGGHADATSAQAKLIELGCPHHPVFFAVD FT FDISLDQWNATAVHYFKAACEVLGRDRVGIYGHSRVISWAVEDQVIADLGGGKHLAWQT FT PAWSMGERATEAVLYQGAANVKGPAGINIDVNEVLHHEWGQHPVGETRLEKSQEMELAM FT KPNPNHRGDPLFLPDVLKAFGVKVQEWDGWRDRGHGDFTVIQGVFAHHTGTDKDIPGYI FT ADHPELGLCSQIHLNRDGTAVIVGAGIAYHAGRGSYPGWPTDNANQVAIGIEAASSGTS FT PWPPAQLDAYYRTCAAILWYLGKPATPQTLLGHKEYSGAAQGKWDPGGIDMNDFRRNVQ FT HYIDNPPFLAADAAHITKEEDPMIQSLINPAKKFAQSTLISIVDATCWQILVLAKAIAK FT KQGLDPDQILADAITADREGK" FT CDS 187501..187824 FT /transl_table=11 FT /locus_tag="DIP0219" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK18" FT /protein_id="CAE48725.1" FT /translation="MANTDIQIAVTRALESQSWWLRRKDSLTSGAGLVLHFANLIVALL FT GDANPWVNVVVALVIGVAQLIIHAGTKGAITPSMVARIDNAAPTPPVFDLDQARDQLAA FT PSE" FT misc_feature order(187579..187638,187651..187710) FT /note="2 probable transmembrane helices predicted for FT DIP0219 by TMHMM2.0" FT CDS 187830..188294 FT /transl_table=11 FT /locus_tag="DIP0220" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK17" FT /protein_id="CAE48726.1" FT /translation="MPIEHLPPRVQPTARRVRAFLMTDSTALLLLAVVQAAMGLYYLPG FT VLGDPLRWQRPVESIMPIIAWAWVHLAVGGLCAVAAVTDRWHVDIVALALATGLNLSWA FT FSLLAASVEHNQSVLWLVGVLILAMTVSLMWAVWRGKRGDIPFAKEGGAA" FT misc_feature order(187905..187973,188016..188078,188097..188165, FT 188175..188243) FT /note="4 probable transmembrane helices predicted for FT DIP0220 by TMHMM2.0" FT CDS 188291..188629 FT /transl_table=11 FT /locus_tag="DIP0221" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK16" FT /protein_id="CAE48727.1" FT /translation="MSVVAAFLSGVGALVTALGGVLIGVVKARSDTHTAKGSRMDVLEA FT RIDKMQADLDDERARRRGVEVDNHRLRMALVTAVKHLEQLIRWADGGAKPPRPDDIDLD FT EIKSLLKA" FT misc_feature 188291..188374 FT /note="Signal peptide predicted for DIP0221 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.930 between residues 28 and 29" FT misc_feature 188928..188946 FT /note="tox promoter, DtxR-regulated" FT CDS 188979..190661 FT /transl_table=11 FT /gene="tox" FT /locus_tag="DIP0222" FT /product="Diphtheria toxin precursor" FT /EC_number="2.4.2.36" FT /note="Identical to previously sequenced Corynephage beta FT diphtheria toxin precursor SW:DTX_CORBE (P00588) (567 aa) FT fasta scores: E(): 6.2e-216, 100% id in 560 aa, and to FT Corynephage omega diphtheria toxin precursor SW:DTX_COROM FT (P00587) (560 aa) fasta scores: E(): 1.1e-215, 99.82% id in FT 560 aa. Note: The start codon for DIP0222 is 7 residues FT downstream of the one in Corynephage beta" FT /db_xref="GOA:Q6NK15" FT /db_xref="InterPro:IPR000512" FT /db_xref="UniProtKB/TrEMBL:Q6NK15" FT /protein_id="CAE48728.1" FT /translation="MSRKLFASILIGALLGIGAPPSAHAGADDVVDSSKSFVMENFSSY FT HGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGG FT VVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSL FT PFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACAGNRVRRSVGS FT SLSCINLDWDVIRDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQTALE FT HPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDSETADNLEKTTAALSILPGIGSVMG FT IADGAVHHNTEEIVAQSIALSSLMVAQAIPLVGELVDIGFAAYNFVESIINLFQVVHNS FT YNRPAYSPGHKTQPFLHDGYAVSWNTVEDSIIRTGFQGESGHDIKITAENTPLPIAGVL FT LPTIPGKLDVNKSKTHISVNGRKIRMRCRAIDGDVTFCRPKSPVYVGNGVHANLHVAFH FT RSSSEKIHSNEISSDSIGVLGYQKTVDHTKVNSKLSLFFEIKS" FT misc_feature 188979..189053 FT /note="Signal peptide predicted for DIP0222 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.839 between residues 25 and 26" FT misc_feature 188979..190658 FT /note="BlastProDom hit to PD025441, PD025441" FT misc_feature 189054..189614 FT /note="HMMPfam hit to PF02763, Diphtheria toxin, C domain" FT misc_feature 189087..189143 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189162..189230 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189276..189344 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189390..189452 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189453..189521 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189549..189617 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189651..190190 FT /note="HMMPfam hit to PF02764, Diphtheria toxin, T domain" FT misc_feature 189867..189926 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189954..190022 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 190035..190106 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 190149..190211 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 190194..190655 FT /note="HMMPfam hit to PF01324, Diphtheria toxin, R domain" FT tRNA 190709..190788 FT /gene="tRNA-Arg" FT /product="transfer RNA-Arg" FT /anticodon=(pos:190749..190751,aa:Arg) FT /note="tRNA Arg anticodon ACG, Cove score 23.44" FT misc_feature 190792..208253 FT /note="Anomalous G+C content (56.92%) and G/C deviation. FT Putative pathogenicity island. Not present in C.glutamicum" FT CDS 190816..190992 FT /transl_table=11 FT /locus_tag="DIP0223" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK14" FT /protein_id="CAE48729.1" FT /translation="MGWGFFACLVRAGAPFPARPFSRLLELKNTKTAGSENLLKVPPLG FT FRVLEFEFADFGG" FT CDS 191070..191210 FT /transl_table=11 FT /locus_tag="DIP0224" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK13" FT /protein_id="CAE48730.1" FT /translation="MPKLFGRFGISAGWRYKKWFNLARTTHLPSKVSHPEEFLAQLVWM FT R" FT CDS 191220..192626 FT /transl_table=11 FT /locus_tag="DIP0225" FT /product="Putative secreted polysaccharide deacetylase" FT /note="N-terminal region similar to Mycobacterium FT tuberculosis CDC1551 polysaccharide deacetylase, putative FT MT1128 TR:AAK45386 (EMBL:AE006993) (291 aa) fasta scores: FT E(): 2.1e-22, 42.43% id in 205 aa" FT /db_xref="GOA:Q6NK12" FT /db_xref="InterPro:IPR002509" FT /db_xref="UniProtKB/TrEMBL:Q6NK12" FT /protein_id="CAE48731.1" FT /translation="MNSVHFRRHTSRTRRISIFLAACLLATGCITGCTISTPNTPVSES FT DSSTSSSQSSQDVELTVDAASGMVSTNSPQLPIHVQWPVLEGHEKLSEAIAVWAEGEAR FT EFIGEYGPREVNPSELNGSGEQVRDGDVVAMRLTLEEFGGANAASMSRMFFSSGDRVWQ FT GPDVIAQDRRVDAARAVLDQLGDRVASGVSADEVAGIPNLFGDVLVEGDVVHVRLPQAS FT VLASSEGIVEVDIPAEGLLSQNGKRLLPPAPVPPPMPQLPQVQSRGAEPVDCSVLKCVA FT LTFDDGPGPYTSQILDTLDSHGVKATFFEIATAIPRFPEVVRRQVASGMEVGSHTVTHR FT QLPLLPLAEQQQEADGASDRLAEAGAPRPVMMRPPYGAWNQDTKRLGYSLILWNVDSED FT WKNRDAQVTTNNIMAQVRPGSIVLMHDIHPSTAEALPGIIDRLKEQGYTLVTVSQLLGQ FT TVPGEVYYGR" FT misc_feature 191220..191354 FT /note="Signal peptide predicted for DIP0225 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.633 between residues 45 and 46" FT misc_feature 192045..192467 FT /note="HMMPfam hit to PF01522, Polysaccharide deacetylase" FT CDS complement(192614..193987) FT /transl_table=11 FT /locus_tag="DIP0226" FT /product="Putative GntR-family regulator" FT /note="Similar to Streptomyces coelicolor putative FT GntR-family regulator SC5G8.04 TR:Q9KZB0 (EMBL:AL353872) FT (462 aa) fasta scores: E(): 8.4e-38, 36.46% id in 458 aa" FT /db_xref="GOA:Q6NK11" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q6NK11" FT /protein_id="CAE48732.1" FT /translation="MRPDLVTNLPITLNRTSTDPIPTQIADHIRTLVGRGLLKPGDHVP FT STRALSTQLDISRGSAVTAYEQLLAEGFLIAARGSGTCINPDLTPTPPPAHSPTPPPEP FT PAIDLTPGLPDTTTLANSSWRAAWRIACTQPPAHTPPQGLLHLREQVADHLRRMRAVVA FT SPDHIIITAGAREGFSLILHALGQDLRVGVESPGYPSLRRVPEALGSTTVPLPTDNDGL FT ITHDLPDLDAILVTPSHQYPHGGSLPAYRRTQLTTWANRTAGLIIEDDFDSELRHIGQP FT LPALFALAPQRTALLGTFSSVISPQVSCGYIVAPPHLVPHLIELRTIFGNTASGITQEA FT LAQYLSTGALRRRTQNLRRTYRRRRDTVISTLGSIPGTTLSPIVGGLHAVLTCTRPEAD FT ILQRCRQRGIIVEGLSNYWSQHPDSDLSNGIVIGFGSHDDTTLTEALHHLAWAVNYRP" FT misc_feature complement(192665..192694) FT /note="ScanRegExp hit to PS00758, ArgE / dapE / ACY1 / CPG2 FT / yscS family signature 1." FT misc_feature complement(193646..193732) FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature complement(193736..193915) FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family" FT /note="HMMSmart hit to SM00345, helix_turn_helix gluconate FT operon transcriptional repressor, DNA-binding" FT misc_feature complement(193766..193816) FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT misc_feature complement(193784..193858) FT /note="ScanRegExp hit to PS00043, Bacterial regulatory FT proteins, gntR family signature." FT misc_feature complement(193814..193858) FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT CDS 194078..194971 FT /transl_table=11 FT /locus_tag="DIP0227" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum pyridoxine FT biosynthesis enzyme CGL0788 SWALL:Q8NS91 (EMBL:AP005276) FT (317 aa) fasta scores: E(): 1e-93, 91.21% id in 296 aa, and FT to Mycobacterium tuberculosis hypothetical 31.4 kDa protein FT Rv2606c or MT2681 or MTCY1A10.27 SW:YQ06_MYCTU (O06208) FT (299 aa) fasta scores: E(): 2.5e-82, 80.41% id in 291 aa" FT /db_xref="GOA:P60800" FT /db_xref="InterPro:IPR001852" FT /db_xref="UniProtKB/Swiss-Prot:P60800" FT /protein_id="CAE48733.1" FT /translation="MTQETFTATTRVKRGLADMLKGGVIMDVVTPEQARIAEDAGASAV FT MALERVPADIRAQGGVARMSDPDLIEGIVNAVSIPVMAKARIGHFVEAQILESLGVDFI FT DESEVLSPADYVNHIDKWNFDVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEA FT VKHLRTIRGEINRLRSMDEDQLYVAAKEIQAPYDLVREVAATGKLPVTLFVAGGVATPA FT DAALVMQMGAEGVFVGSGIFKSGNPAARAAAIVKATTMYDDPAAIAEVSRGLGEAMVGI FT NVADVPAPHRLAERGW" FT misc_feature 194102..194722 FT /note="BlastProDom hit to PD004958, PD004958" FT /note="HMMPfam hit to PF01680, SOR/SNZ family" FT misc_feature 194699..194806 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 194965..195522 FT /transl_table=11 FT /locus_tag="DIP0228" FT /product="Putative amidotransferase" FT /note="Similar to Streptomyces coelicolor hypothetical 21.5 FT kDa protein SCl2.12c TR:Q9L287 (EMBL:AL137778) (202 aa) FT fasta scores: E(): 2.5e-29, 49.45% id in 182 aa, and to FT Mycobacterium tuberculosis CDC1551 amidotransferase, FT putative MT2679 TR:AAK46995 (EMBL:AE007101) (198 aa) fasta FT scores: E(): 1.5e-26, 47.54% id in 183 aa" FT /db_xref="GOA:Q6NK10" FT /db_xref="InterPro:IPR002161" FT /db_xref="UniProtKB/Swiss-Prot:Q6NK10" FT /protein_id="CAE48734.1" FT /translation="MVIGVLTLQGGFAEHIAILESLGVEHRRVRVPNDLLGLDGLIIPG FT GESTVMDKLARAFDLAEPLRAAINNGLPVFATCAGLIYLGTVENPAKGQQTLGCLDVVV FT RRNAFGRQVDSFDAVVDVEGIDANVAFIRAPEVISCGAGVTVTARVGDHVVGVRQGKIH FT AYAFHPESAGEVRLHQAWLASI" FT misc_feature 194977..195516 FT /note="HMMPfam hit to PF01174, SNO glutamine FT amidotransferase family" FT CDS complement(195519..195686) FT /transl_table=11 FT /locus_tag="DIP0229" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK09" FT /protein_id="CAE48735.1" FT /translation="MDRSEEKVFEESTVVWQWWMWAIVAAAALVLILLAWWLRKNSRKA FT QRSNLTQRSN" FT misc_feature complement(195576..195632) FT /note="1 probable transmembrane helix predicted for DIP0229 FT by TMHMM2.0" FT CDS complement(join(196003..196275,196395..196721, FT 196723..196977)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0230" FT /product="IS element transposase (pseudogene)" FT /note="Pseudogene. Similar to Shigella flexneri putative FT transposase for IS110 S0128 TR:Q9AFS5 (EMBL:AF348706) (398 FT aa) fasta scores: E(): 5.4e-25, 34.75% id in 328 aa. FT Presents frameshifts at residues 85 and 194 and lacks stop FT codon" FT misc_feature complement(196006..196233) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02371, Transposase FT IS116/IS110/IS902 family" FT misc_feature complement(196873..196950) FT /note="ScanRegExp hit to PS00217, Sugar transport proteins FT signature 2." FT CDS complement(197202..197330) FT /transl_table=11 FT /locus_tag="DIP0232" FT /product="Putative exported protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK08" FT /protein_id="CAE48737.1" FT /translation="MPGALINIMSSSSSQASTTRRLTATAAVTLATAPAFAAPVTL" FT misc_feature complement(197226..197330) FT /note="Signal peptide predicted for DIP0232 by SignalP 2.0 FT HMM (Signal peptide probability 0.638) with cleavage site FT probability 0.563 between residues 35 and 36" FT CDS complement(197338..198327) FT /transl_table=11 FT /locus_tag="DIP0233" FT /product="Putative fimbrial associated sortase-like FT protein" FT /note="Similar to Actinomyces naeslundii putative fimbrial FT associated protein TR:O05996 (EMBL:U85709) (280 aa) fasta FT scores: E(): 4.5e-16, 40.000% id in 215 aa, and to FT Staphylococcus aureus sortase SrtA TR:Q9S446 FT (EMBL:AF162687) (206 aa) fasta scores: E(): 1.2, 26.923% id FT in 156 aa. Note: Also similar to DIP0236 (312 aa) E(): FT 5.7e-25; 45.342% identity in 322 aa overlap, DIP2224, FT DIP2012 and DIP2225" FT /db_xref="InterPro:IPR005754" FT /db_xref="UniProtKB/TrEMBL:Q6NK07" FT /protein_id="CAE48738.1" FT /translation="MTDQPPTPNTADATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVL FT ATQWNNYQQSRAAEAYSQLEKGVPPEVLNKAWEEAQQYNANLGDIDPGDAWTSSDDESS FT SAYQRYLNYLSALNETEAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPVGAP FT GELGEDGVIPPAPPEGRLSALSAHTGLQNATLWDNLIQIKKGDPVYVAAAGEKLKYEVR FT NIEVVTPDKTSLLRRTSNKDQVTLITCTPYGINTHRLIITAERVPMDPQGESAFDGQGT FT TWQWWMWAILAAAAIIVLLLIRWWWKNFRKQEGEEGPTTSGAGGTTES" FT misc_feature complement(order(197410..197475,198181..198246)) FT /note="2 probable transmembrane helices predicted for FT DIP0233 by TMHMM2.0" FT CDS 198371..198847 FT /transl_table=11 FT /locus_tag="DIP0234" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK06" FT /protein_id="CAE48739.1" FT /translation="MWRVGVYSSLRGYKRLNFCCEMLIAAYPKVGECAREGLMDKEVCI FT NAAKGRFLGLRLPELFGGSDMRLNRSCRRRNMKLAAWCMLIQCDSRGGNHAAEVREIGD FT ITKIAICQQCDFECAGPSANFKVTRLQGLRTLKAANRSESLNVEGCYALQSLLM" FT CDS 198862..200334 FT /transl_table=11 FT /locus_tag="DIP0235" FT /product="Putative fimbrial subunit" FT /note="Similar to Actinomyces viscosus type-1 fimbrial FT major subunit precursor FimP TR:Q9X4D1 (EMBL:AF106034) (535 FT aa) fasta scores: E(): 6.9e-16, 31.5% id in 530 aa. Note: FT Contains a potential sortase anchor site (LTMPG) upstream FT of the C-terminal region transmembrane domain" FT /db_xref="InterPro:IPR008454" FT /db_xref="UniProtKB/TrEMBL:Q6NK05" FT /protein_id="CAE48740.1" FT /translation="MKKNSLTIRSVTFAAVAGLSLGISAPGAVAIAEEGTQVQQTQRAN FT IDFERKGSLTLHKKKGAESEKRATGKEMDDVAGEPLNGVTFKITKLNFDLQNGDWAKFP FT KTAADAKGHETSTTKEVETSGNGTAVFDNLDLGIYLVEETKAPDGIVTGAPFIVSIPMV FT NEASDAWNYNVVAYPKNTETKTEKTVKDADQNIQDAYTYTIKADAPTWGKDKKLTAFRF FT EDELDKRLDFQKVTEVKAGDTVLGTSDYTVNDPATDGNKLVVTLTDEGLKKVKSGDKMS FT LTFEVKRKEVGNTTELKNRADVIFNNPNTDKEVKNKTNEVVTYHGKLKVVKKDGKEAGK FT VLKGAEFELYQCTSAAVLGKGPLTVDGVKKWTTGDDGTFTIDGLHVTDFEDGKEAAPAT FT KKFCLKETKAPAGYALPDPNVTEIEFTRAKISEKDKFEGDDEVTLVSEIKNIKQGTPKL FT PMTGGAGVGILAAIGAAIVAAGAWFARRGAKN" FT misc_feature 198862..198957 FT /note="Signal peptide predicted for DIP0235 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.832 between residues 32 and 33" FT misc_feature 200233..200247 FT /note="potential sortase anchor site LPMTG" FT misc_feature 200233..200250 FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT misc_feature 200245..200313 FT /note="1 probable transmembrane helix predicted for DIP0235 FT by TMHMM2.0" FT CDS 200435..201373 FT /transl_table=11 FT /locus_tag="DIP0236" FT /product="Putative fimbrial associated sortase-like FT protein" FT /note="Similar to Actinomyces naeslundii putative fimbrial FT associated protein TR:O68213 (EMBL:AF019629) (365 aa) fasta FT scores: E(): 1.2e-31, 42.802% id in 257 aa, and to FT Staphylococcus aureus sortase SrtA TR:Q9S446 FT (EMBL:AF162687) (206 aa) fasta scores: E(): 0.094, 27.559% FT id in 127 aa. Note: Also similar to DIP0233 (329 aa) E(): FT 5.2e-25; 45.031% identity in 322 aa overlap. Note: Also FT similar to DIP2012, DIP2224 and DIP2225" FT /db_xref="InterPro:IPR005754" FT /db_xref="UniProtKB/TrEMBL:Q6NK04" FT /protein_id="CAE48741.1" FT /translation="MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTS FT TLWNNHLATKAAQEYAKLEKNAPQEVKNTQWERAHEYNENRTTGPIFDPWLARFDENNS FT DYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKGMHS FT VITGHTGLANSTMFDHLNKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGK FT DYITLITCTPYGINTHRLMVRGHQVPLAPEDHEVFDKNHGAGWQWWMYTLLAAAAVVLL FT LLLRWLLKNKRDGESQETTEMMNDEGAGADD" FT misc_feature order(200510..200578,201230..201298) FT /note="2 probable transmembrane helices predicted for FT DIP0236 by TMHMM2.0" FT CDS 201366..202157 FT /transl_table=11 FT /locus_tag="DIP0237" FT /product="Putative surface anchored protein" FT /note="No significant database matches. Note: Contains a FT potential sortase anchor site (LALTG) upstream of the FT C-terminal region transmembrane domain" FT /db_xref="InterPro:IPR019931" FT /db_xref="UniProtKB/TrEMBL:Q6NK03" FT /protein_id="CAE48742.1" FT /translation="MTSHARAVRTSRRLVAAIALSAGLLGGAYGAVGVADAAKVAGLSD FT QPGVSRDYGTDTLSITLSPGNGDPVNPATGKVAGVTIKLQRLQGIDPENAADQAKVRNT FT SADKIAGWPTDRTIKAVTNEAGQVRFQGLEKGIYLVTSQAPAGAAAGEYREISPFLVAV FT PFHTVADNPRPVEGVIVAKTNSTVPPTTPPWTPPTTPSTPPPGHTPPLRETPGSGDEKE FT REQGDLALTGVQIIGLVLAAVALMGAGLLMLLITKKRKQEG" FT misc_feature 201366..201476 FT /note="Signal peptide predicted for DIP0237 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.607 between residues 37 and 38" FT misc_feature 201927..202010 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 202047..202061 FT /note="potential sortase anchor site LALTG" FT misc_feature 202062..202130 FT /note="probable transmembrane helix predicted for DIP0237 FT by TMHMM2.0" FT CDS 202163..205282 FT /transl_table=11 FT /locus_tag="DIP0238" FT /product="Putative surface-anchored fimbrial subunit" FT /note="weak similarity to Actimomyces fimbrial associated FT protein. Note: Contains a potential sortase anchor site FT (LPKTG) upstream of the C-terminal region transmembrane FT domain" FT /db_xref="InterPro:IPR019931" FT /db_xref="UniProtKB/TrEMBL:Q6NK02" FT /protein_id="CAE48743.1" FT /translation="MKTKFMGVAAALTAALALVFGVAAPGALPSLPVATAQAQDRSFTV FT TSQQRYEQKGTRFIPNYKIPADQLSGGTITLGAGTVVTLESSIRFYLAPNDADFTVYYT FT GTDGNWYETKATYKKVSVKKYEVTLPEITIGGAAEIEFKGVHRGPPNTVISAKFDVVGG FT TTQPEPEPDPAPEPQPAPEPEPGTSVNPAAPTAVDPATAPSCVEKGYINIPDTKGVDYF FT IGGELKHAGQHFYEGQKASVKVTAKPQNGYQFAAGAKTEWSFDFSGEVKDCSDSSEDPK FT PAAVEGRHFDAIGHEFAVEADPVDPTKPNAFTAKVTAESHMKYATVRIETDATFLDPQK FT YNLTLDQIEPGVTLQKRNVNIGNGFITMDVVPVKDGKPVDSAVVPKDAVFTFTNNLSEN FT KNLKIALDVYGANKSTPKPPDIISPPDGAQWVHGRVPNPPMPKRCGLRIAVVADLSTSL FT KYADSNGFDESKKAANALIDSLAGTPAELGIYNFAGGAPRNPAGSTYGQNPPYISLQSD FT DGVSRAKSIVSNWNGNGSTNWEAGLKQVAAGNYDVVYFITDGMPTYSSKAPQLGLGGEF FT VQESALNQAIDAANELKAAGTRVVPIMVDLTVGGKNAQHTTVTQDLVLKNVRFWKRGTS FT NSEPGLYFQFTNKYVDAASYVGDDTTANFEIAYKNGGFKVWERTSRGRNIDVTRDQSKW FT TYGPREVKTMGEDISGTGDTIRVEQYSQLAAQMKKIGEELALRCNGVVKVKKRIVDENG FT RAIEDGVPGWEFTLSAGGQDIIDPGNGDRVRKSLKATSSANEDRGTASWNIMSEQEQQL FT TLVETQQPGFNLYKRNDKNAVCTETRDGVMKPIEVTNDGEFGFKVKMRAKDKKLSSVSC FT VVDNYKQPETPPGKLTFKKAQYNGDKIEEIPGLGGATFEIYPSKGDQPDYSAEALYTIK FT PGQESIEVKTTGTFFLVETKAPKGLNLLAQPVKFEISVDETTKKYKISVGSTSSGQVQA FT KGEGDKMILTVADTTAGELPKTGGYGVGLVGLIGVALAGAGFLLGRRKTA" FT misc_feature 202163..202276 FT /note="Signal peptide predicted for DIP0238 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.912 between residues 38 and 39" FT misc_feature 202661..202771 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 204530..204574 FT /note="ScanRegExp hit to PS00678, Trp-Asp (WD) repeats FT signature." FT misc_feature 205184..205198 FT /note="potential sortase anchor site LPKTG" FT misc_feature 205184..205201 FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT misc_feature 205196..205264 FT /note="probable transmembrane helix predicted for DIP0238 FT by TMHMM2.0" FT stem_loop 205348..205392 FT CDS complement(join(205490..205561,205575..205949)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0239" FT /product="Putative surface-anchored protein (pseudogene)" FT /note="Pseudogene. No database matches. Note: Contains a FT potential sortase anchor site (LPSTG). Presents a FT frameshift at residue 125" FT /db_xref="PSEUDO:CAE48744.1" FT misc_feature complement(205505..205519) FT /note="potential sortase anchor site LPSTG" FT misc_feature complement(205581..205646) FT /note="1 probable transmembrane helix predicted for DIP0239 FT by TMHMM2.0" FT CDS complement(205903..206310) FT /transl_table=11 FT /locus_tag="DIP0240" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK01" FT /protein_id="CAE48745.1" FT /translation="MSRRSLRCRRRPLQLGAVEPALVGEKRTLSARYEVSAGFPEGAKV FT IFRANGVRVGTAQTDAEGNASVEYVFDQAGLQKITAEVREREVDGRIFSKAEAEAEPFE FT VLSAGEVETGTRLTLEDDSVDLDATPLPDPR" FT CDS complement(206336..206485) FT /transl_table=11 FT /locus_tag="DIP0241" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NK00" FT /protein_id="CAE48746.1" FT /translation="MIRGVFFNGDEEIGHAKTSNGVAELQTIVPDEAATLQLSAVVEDF FT ENDT" FT CDS complement(206740..207051) FT /transl_table=11 FT /locus_tag="DIP0242" FT /product="Putative IS element transposase" FT /note="Similar to Burkholderia cepacia insertion element FT IS401 hypothetical 12.4 kDa protein SW:YISX_BURCE (Q51647) FT (107 aa) fasta scores: E(): 1.6e-06, 36.78% id in 87 aa" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ9" FT /protein_id="CAE48747.1" FT /translation="MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNS FT IYAWFKKSTFETIESDDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSLHFG" FT CDS complement(207298..207492) FT /transl_table=11 FT /locus_tag="DIP0243" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ8" FT /protein_id="CAE48748.1" FT /translation="MLPPVVPTSLAAENTRTQSCAIATSNVEYKKYVKAYSFMCISYKD FT DDVVVEVTFFEISYWYFSG" FT CDS complement(207638..208117) FT /transl_table=11 FT /locus_tag="DIP0244" FT /product="Putative exported protein" FT /note="No significant database matches. Possible secreted FT protein" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ7" FT /protein_id="CAE48749.1" FT /translation="MRMKVTYNYNIQCCLTAAAKAFALFLFAIPPASAQPSGITSIIRW FT PVGTSDNFSSATRYRNSAWAVQQHLAGSDYLTVQLGDRQATFTRSAARLLLLGALMLGE FT ATHFEPAIGTAIDHAISQGRPYNFTLSDEELIRNWGTPQRLETAHKPRPNRGTIP" FT misc_feature complement(208016..208117) FT /note="Signal peptide predicted for DIP0244 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.996 between residues 34 and 35" FT CDS complement(208253..209263) FT /transl_table=11 FT /locus_tag="DIP0245" FT /product="Putative prephenate dehydrogenase" FT /EC_number="1.3.1.12" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT prephenate dehydrogenase MT3861 TR:AAK48225 (EMBL:AE007181) FT (323 aa) fasta scores: E(): 5.5e-49, 52.31% id in 281 aa, FT and to Bacillus subtilis prephenate dehydrogenase TyrA FT SW:TYRA_BACSU (P20692) (372 aa) fasta scores: E(): 2.7e-15, FT 31.9% id in 279 aa" FT /db_xref="GOA:Q6NJZ6" FT /db_xref="InterPro:IPR003099" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ6" FT /protein_id="CAE48750.1" FT /translation="MTINEVSRPVCVLGLGLIGGSLLRALRHKGVPAFGFNRSPSAARI FT ATKEGFDVSSSLIQTLERAEAENALIVLATPMPAIASLLDALQEHAPSCGFTDVVSVKE FT AVYDLVKSRGLQSRYVGGHPMAGTANSGWEASYPELFVRAPWVVTYDFAPEADAEWVGL FT WTDVVNMAGTVGAEVIPARVEAHDAAVARISHLPHVFAEALAIVGDNGGALALSLAAGS FT FRDSTRVAGSAPSLVRAMCETNAQALLGALDEALTLLNDARAHLTEAHPNLEELIDAGY FT RSRVRFEARSGGNASESVGPTKISNRPVFRFHPGSDGWIAQLKQAEGLGARIEIF" FT misc_feature complement(208412..209230) FT /note="HMMPfam hit to PF02153, Prephenate dehydrogenase" FT CDS 209301..209753 FT /transl_table=11 FT /locus_tag="DIP0246" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 17.9 kDa protein Rv3753c or MTV025.10c TR:O69720 FT (EMBL:AL022121) (166 aa) fasta scores: E(): 1e-20, 45.57% FT id in 147 aa" FT /note="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ5" FT /protein_id="CAE48751.1" FT /translation="MKSNFAVTVARVNATWQVRAFNDDYSSLKRSIDAVRTLGAEGAAF FT AMLSIEDDYFVLVRPTPQGVKLLISDATAATEDDFAADILDELDADQPDPEDTPYAEGD FT FDILADLGLSEQIMSIITDETDWWASEQLQRIAEELGFDDELEQAL" FT misc_feature 209774..210082 FT /note="HMMPfam hit to PF00383, Cytidine and deoxycytidylate FT deaminase zinc-binding region" FT CDS 209792..210235 FT /transl_table=11 FT /locus_tag="DIP0247" FT /product="Putative cytosine deaminase" FT /EC_number="3.5.4.12" FT /note="Similar to Bifidobacterium longum cytosine deaminase FT TR:Q9F9W7 (EMBL:AF160969) (143 aa) fasta scores: E(): FT 1.2e-28, 53.47% id in 144 aa, and to Mycobacterium FT tuberculosis CDC1551 cytidine and deoxycytidylate deaminase FT family protein MT3859 TR:AAK48223 (EMBL:AE007181) (152 aa) FT fasta scores: E(): 6.9e-28, 53.47% id in 144 aa" FT /db_xref="GOA:Q6NJZ4" FT /db_xref="InterPro:IPR002125" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ4" FT /protein_id="CAE48752.1" FT /translation="MMREAITLAHTTPPADIPVGAIIYGPDGTILGRGTNRRETDHNPL FT GHAEIMAITQACTQRGDGWRLTDCTLAVTLEPCTMCAGALVGSRIGHIIFGAYEPKTGA FT CGSAFDVVRDPAVLHTVQVRGGILEAECAELMTNFFGGLRTEA" FT misc_feature 209930..210046 FT /note="ScanRegExp hit to PS00903, Cytidine and FT deoxycytidylate deaminases zinc-binding region signature." FT tRNA 210284..210371 FT /gene="tRNA-Ser" FT /product="transfer RNA-Ser" FT /anticodon=(pos:210318..210320,aa:Ser) FT /note="tRNA Ser anticodon CGA, Cove score 55.08" FT stem_loop 210438..210539 FT /note="Score 58: 22/24 (91%) matches, 0 gaps" FT CDS 210640..211152 FT /transl_table=11 FT /locus_tag="DIP0248" FT /product="Putative excisionase" FT /note="Similar to Arthrobacter spTM1 putative excisionase FT TR:Q9LCU5 (EMBL:AF042490) (174 aa) fasta scores: E(): FT 4.4e-21, 41.07% id in 168 aa" FT /db_xref="GOA:Q6NJZ3" FT /db_xref="InterPro:IPR000551" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ3" FT /protein_id="CAE48753.1" FT /translation="MSLSERTYFPPAEEGELSKVESFLAVYKDRHGTEARPQFFLSGSN FT EGEQIPLPKELYEILVRTVEALASGKAVTIHPNDPLVTTQQAAELLGVSRPTVVKLIED FT GKLEATKVTRHRRIKLEDVLRYQERQTIEQLDFLASTTSDAPALTESEYVSVRKMLANK FT RKESRIG" FT misc_feature 210883..210948 FT /note="Predicted helix-turn-helix motif with score 1896 FT (+5.64 SD) at aa 82-103, sequence VTTQQAAELLGVSRPTVVKLIE" FT CDS 211399..211599 FT /transl_table=11 FT /locus_tag="DIP0249" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ2" FT /protein_id="CAE48754.1" FT /translation="MSSLCQNFLAFAAFPQVGNIRNGLIWHELLIPPAEPREPREPAEP FT PKPANPNQGLHWKTISRSLVV" FT CDS 211613..213949 FT /transl_table=11 FT /locus_tag="DIP0250" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT transport protein sce87.17C TR:Q9RKC1 (EMBL:AL132674) (745 FT aa) fasta scores: E(): 2.9e-36, 42.48% id in 798 aa" FT /db_xref="GOA:Q6NJZ1" FT /db_xref="InterPro:IPR000731" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ1" FT /protein_id="CAE48755.1" FT /translation="MAAFLYRVGAWSFRAKWFVIVTWLVVLAAVGGAAAAFQAGFNDLF FT TINNTPAKTATEIYLENFPEQRNPLKSTGVNIVFKAPEGHTLAEPENKAAMDSVVQAIQ FT DNLEGLTNTQRFGNPVELNPKLQQGVIDLMTQRGVPEENARADAANLSLITPDETIGYT FT TFDIDVPMPADVSDAQRQAITDAMNLGREKGLTVEAGGAGFGDPIVIEETSEIIGVAIA FT AIILIFTFGSLVAAGLPLLIAVIGVGIGSLSITLATAWVSLNNVTPVLAVMLGLAVGID FT YSLFIMFRYRRELLHLDKEQAAGMAVGTAGSAVVFAGLTVIIALVALAVANIPFLTYMG FT LAAAFTVFIAVLIALTMVPALLGALGDKAFAVRLRRKRRTSPARTLGRKWGELVHRAPG FT VVIAVSVVTLGALTLPALQLHLSLPSDTQASYSSTQRKQAEIMAEGFGPGINSPFLVVA FT DAHSVDENAEILEPLIRAQNPAPGERKQAAANAAYQYIIQKYSVTPDVKHVQIVGLSKD FT GLAAQLLLTPESSPEDDVTKQLIDALLIKQDEVNNATGIRSGITGLIPVQQDVTNRLAG FT VMPLYLGIVVGLAVLLLMIVFRSIWVPVVAGVGFLLSVGAAFGVTVLFWQEGLWGLVDT FT PSPIIAFMPIFLIGVCFGLAMDYQVFLVSAMRERFVHGRIDATSRYNAIEESIVEGFAS FT SVRVVTAAALIMIAVFVAFIGQPIPFIKIFGFALGAGVLFDAFFIRMAFVPAAMFLLGR FT QTWYMPHWLDKVLPRLDVEGTSLER" FT misc_feature 211613..211720 FT /note="Signal peptide predicted for DIP0250 by SignalP 2.0 FT HMM (Signal peptide probability 0.939) with cleavage site FT probability 0.419 between residues 36 and 37" FT misc_feature order(211661..211729,212258..212326,212330..212398, FT 212408..212476,212537..212605,212642..212710, FT 212801..212869,213332..213400,213419..213487, FT 213530..213598,213704..213772,213800..213868) FT /note="12 probable transmembrane helices predicted for FT DIP0250 by TMHMM2.0" FT misc_feature 212246..212317 FT /note="FPrintScan hit to PR00702, Acriflavin resistance FT protein family signature" FT misc_feature 212309..212704 FT /note="ProfileScan hit to PS50156, Sterol-sensing domain FT (SSD) profile." FT misc_feature 212405..212479 FT /note="FPrintScan hit to PR00702, Acriflavin resistance FT protein family signature" FT misc_feature 212627..212698 FT /note="FPrintScan hit to PR00702, Acriflavin resistance FT protein family signature" FT repeat_region 214119..214410 FT /note="repX" FT CDS 214616..215908 FT /transl_table=11 FT /locus_tag="DIP0251" FT /product="Putative tRNA-ribosyltransferase" FT /note="Similar to Archaeoglobus fulgidus putative queuine FT tRNA-ribosyltransferase Tgt or AF1485 SW:TGT_ARCFU (O28787) FT (403 aa) fasta scores: E(): 8.6e-40, 40.78% id in 407 aa, FT and to Escherichia coli queuine tRNA-ribosyltransferase Tgt FT or B0406 or Z0505 or ECS0457 SW:TGT_ECOLI (P19675) (375 aa) FT fasta scores: E(): 4.5e-13, 37.68% id in 406 aa" FT /db_xref="GOA:Q6NJZ0" FT /db_xref="HSSP:1K4G" FT /db_xref="InterPro:IPR002616" FT /db_xref="UniProtKB/TrEMBL:Q6NJZ0" FT /protein_id="CAE48756.1" FT /translation="MTDTTFELRTELDDAPGRHGRTGVIHTPHGDINTPAFIPVATKAT FT VKTLTPQQIRDTGAQAILSNAYHLYLQPGPDIVDEAGGVSKFENWHGPTYTDSGGFQVM FT SLGVGFKKVLAMDTAGLVEGDIRAPKKDRYAQVDEDGVDFRSVIDGSRHRFTPEVSMQI FT QHRLGADIIFAFDELTTLVDTRQYQESSVERTHRWARRCLIEHDRLTREREGKPLQSLW FT GVVQGAQYEDLRRQAVRGLLDLDKEAEDNGRRGFGGFGIGGALEKENLGTIVGWVCDEI FT PQHKPRHLLGISEPDDLFTAIEAGADTFDCVAPTRLGRRGGVYTLDGRVNLTAARFKRD FT FRQVDEEFGGPIAEYSRAYIHHLFKAKEFLGGTLCTMHNVAFMIQLVDNIRSAINNGDF FT EAYRDEFLGRYYASKGGPAAAGRSGGMIYGV" FT misc_feature 215087..215839 FT /note="HMMPfam hit to PF01702, Queuine FT tRNA-ribosyltransferase" FT CDS 215918..216811 FT /transl_table=11 FT /locus_tag="DIP0252" FT /product="Putative glutamyl-tRNA synthetase" FT /note="Similar to Escherichia coli glutamyl-tRNA synthetase FT GltX or B2400 SW:SYE_ECOLI (P04805) (471 aa) fasta scores: FT E(): 1.6e-25, 35.38% id in 260 aa" FT /db_xref="GOA:Q6NJY9" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q6NJY9" FT /protein_id="CAE48757.1" FT /translation="MGTFQGAGRYAPSPSGDLHFGNVRTAVLAWLFARHTGRRFLIRVE FT DVDTQRSSLESAARQLEDLHALGMDWDAAPTYQHNNFDRYEQALRNLPHYECYCSRKDI FT QEASRAPHTIPGQYPGTCRNLTEVQREERRQALAKQGRVPALRLRADVPTWHVRDYYAG FT DVLGDVDDMILRRGGQQPDWAYNLAVVVDDAADGIDQVVRGNDLLTSAPRQAYLAHLLG FT VPAPTYVHVPLVLNAAGQRLAKRDGAVTMREMPDILPRVAESLGLSARTLPGMLEEFDP FT DRFSQQPWIFAIHKEV" FT misc_feature 215942..215980 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 215942..216172 FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q)" FT misc_feature 215984..216019 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 216029..216070 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 216464..216496 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 216470..216667 FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q)" FT misc_feature 216512..216538 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT CDS 216891..218279 FT /transl_table=11 FT /gene="gntP" FT /locus_tag="DIP0253" FT /product="gluconate permease" FT /note="Similar to Corynebacterium glutamicum gluconate FT permease GntP TR:Q9AL75 (EMBL:AJ296014) (463 aa) fasta FT scores: E(): 2.9e-113, 69.34% id in 460 aa, and to Bacillus FT subtilis gluconate permease GntP SW:GNTP_BACSU (P12012) FT (448 aa) fasta scores: E(): 4.8e-53, 38.58% id in 451 aa" FT /db_xref="GOA:Q6NJY8" FT /db_xref="InterPro:IPR003474" FT /db_xref="UniProtKB/TrEMBL:Q6NJY8" FT /protein_id="CAE48758.1" FT /translation="MEDWVPTLSAGPLLGIAAAAIALILVLVIVFKLHAFLTLIIVSAA FT TGLAAGIPLEGIVPTMTKGFGSTLASVALLVGLGAMLGRLVETSGGAKSLAETLVARFG FT EQRAPFALGVASLLMGFPIFFDAGLIVMLPVIFAVARRLNGPVLAYGIPAAGAFSVMHI FT YLPPHPGPISAAEFYSADIGLVMLLGLIIAIPTWLISGLWLGKTLGRRYPLPVPDILAG FT GPQATDVKNPATPGLIVSLLLLPMLLIFGNTSMGLATSAGWVDKSSSLVRALQFVGSTP FT IALLISTLVALYFLGIRRGQPKADLEKLLDGALGPICSVVLITGAGGMFGGVLRTSGIG FT DALADSMSDLGVPVVLGCWLVAAILRLAQGSATVALTTAAALMAPAVAAGGYSEFQIAL FT MVLASAAGSVFAGHVNDSGFWLVGRLMGMDVATTLRTWTLNQALVGAVGFVFVLVFYGV FT SFAF" FT misc_feature 216891..217022 FT /note="Signal peptide predicted for DIP0253 by SignalP 2.0 FT HMM (Signal peptide probability 0.635) with cleavage site FT probability 0.357 between residues 44 and 45" FT misc_feature order(216915..216983,216993..217061,217080..217148, FT 217242..217310,217323..217391,217434..217502, FT 217599..217667,217710..217778,217815..217883, FT 217926..217985,218004..218063,218091..218159, FT 218196..218264) FT /note="13 probable transmembrane helices predicted for FT DIP0253 by TMHMM2.0" FT misc_feature 216921..218264 FT /note="HMMPfam hit to PF02447, GntP family permease" FT CDS complement(218276..218779) FT /transl_table=11 FT /locus_tag="DIP0254" FT /product="Putative transferase" FT /note="Similar to Streptomyces coelicolor putative FT gluconokinase SCI52.21 TR:Q9AD88 (EMBL:AL590507) (175 aa) FT fasta scores: E(): 4.2e-33, 60.39% id in 154 aa, and to FT Escherichia coli thermosensitive gluconokinase IdnK or GntV FT or B4268 SW:IDNK_ECOLI (P39208) (187 aa) fasta scores: E(): FT 3e-20, 44.15% id in 154 aa" FT /db_xref="GOA:Q6NJY7" FT /db_xref="InterPro:IPR006001" FT /db_xref="UniProtKB/TrEMBL:Q6NJY7" FT /protein_id="CAE48759.1" FT /translation="MSTAVKVVVMGVSGSGKTTVGTLLAERLGVEYRDGDDLHSQANIE FT KMASSIPLNDDDRWPWLAQVGEWLAAQLAGGVIGCSALKRSYRDVLRRECPEVVFVHVY FT GSREVLLERMNHREGHFMPASLLDSQFATLQPLENDEVGHVFDVTDSPAQIADAAARWL FT SERS" FT misc_feature complement(218726..218749) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(218871..219080) FT /transl_table=11 FT /locus_tag="DIP0255" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NJY6" FT /protein_id="CAE48760.1" FT /translation="MDALRLLGCCGFRAHFRLLELTNTKTAGRDFRAEMPSLGFRVLEF FT EKADTSRQVRTNLTPQRSPTKHIL" FT misc_feature complement(218934..218990) FT /note="ScanRegExp hit to PS00179, Aminoacyl-transfer RNA FT synthetases class-II signature 1." FT stem_loop complement(218937..219032) FT /note="Score 69: 35/44 (79%) matches, 0 gaps" FT tRNA complement(219137..219222) FT /gene="tRNA-Ser" FT /product="transfer RNA-Ser" FT /anticodon=(pos:219186..219188,aa:Ser) FT /note="tRNA Ser anticodon GGA, Cove score 51.87" FT CDS 219238..219384 FT /transl_table=11 FT /locus_tag="DIP0256" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NJY5" FT /protein_id="CAE48761.1" FT /translation="MPCYFANNTHASVDQANPQEDGEWVVVELLRGGGSVRLGAGLRMA FT RIP" FT CDS 219574..220833 FT /transl_table=11 FT /locus_tag="DIP0257" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3825 TR:AAK48194 FT (EMBL:AE007179) (435 aa) fasta scores: E(): 5.2e-94, 55.95% FT id in 420 aa" FT /db_xref="GOA:Q6NJY4" FT /db_xref="InterPro:IPR015421" FT /db_xref="PDB:3D6K" FT /db_xref="UniProtKB/TrEMBL:Q6NJY4" FT /protein_id="CAE48762.1" FT /translation="MSLKDYDAARLAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLD FT LSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIM FT FDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEGPD FT MGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALH FT TLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHAN FT VRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWT FT SPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVA FT ELEVAMDGFATCVLMAALEV" FT CDS 220837..221388 FT /transl_table=11 FT /locus_tag="DIP0258" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q6NJY3" FT /protein_id="CAE48763.1" FT /translation="MNFDETAVWLDGVFPGELTIHSAPAESFRVGTADLGDDMLATTLD FT FARVDTGLEAGGRDVRSEIFTVAHAGVGTEKFVELLRTLGTLLYDASGSLPAQPGQLVP FT AVGIEPFDGTDITVRHGLFVVPYVWGGEVPQCDEPDRLTVMLQLVMLTQEEFDYAVTYG FT IPELQSEIARSGIDLLDWSR" FT CDS 221399..223522 FT /transl_table=11 FT /gene="dnaX" FT /gene_synonym="dnaZX" FT /locus_tag="DIP0259" FT /product="DNA polymerase III subunit gamma/tau" FT /EC_number="2.7.7.7" FT /note="Similar to Mycobacterium tuberculosis DNA polymerase FT III subunit gamma/tau DnaX or DnaZX or Rv3721c or MT3824 or FT MTV025.069c SW:DP3X_MYCTU (O69688) (578 aa) fasta scores: FT E(): 7.5e-72, 53.57% id in 573 aa, and to Bacillus subtilis FT DNA polymerase III subunit gamma/tau DnaX or DnaH FT SW:DP3X_BACSU (P09122) (563 aa) fasta scores: E(): 1.5e-29, FT 31.22% id in 570 aa" FT /db_xref="GOA:Q6NJY2" FT /db_xref="InterPro:IPR012763" FT /db_xref="UniProtKB/TrEMBL:Q6NJY2" FT /protein_id="CAE48764.1" FT /translation="MALYRKYRPASFAEVVGQEQVTQPLSVALDSGRINHAYLFSGPRG FT CGKTSSARIMARSLNCVEGPTSTPCGKCNSCISLAPNGPGNLDVTELDAASNRSVDDMR FT ELRDRAMYAPAESRYRIFIIDEAHMITRDGANALLKIVEEPPAHLIFIFATTEPEKILP FT TIRSRTHHYPFRLLTPQSMRGLLERTVASEHVAVEDSVYPLVIRAGGGSPRDTLSILDQ FT LIAGAGPDGLDYNLARMLLGATDDTLIDTTIDALAGNDNAALFQVVDDAIEAGLDPRRF FT ATDLLDRFRDLMVLQSVPDALTLGLVDAPTDRGDILRDQATHLPAGEAARLAALVNDGL FT RGLKGATSPRLLLEILCAKMLLPSAQPAATATAPAAAAPAPAPTEIPAKYERRSVRLAR FT EAAARKNAEAPAPEPAPEPKPEPKPEPRDGFATIQEKWATISDVIFKANSVAGILLSQA FT TLLGLRDDSTLVIGHNTGALAHRINDPQHAGSIVTAIKQETDLDVTIECVVGTDPKAAG FT FSEPENKKVWNPEPKPEPKPEPKPEPKPEPEPAPASDNVWGAPAPLGGGQPATPPPPPV FT ERFSPAKATAPQPPAAPQPVQEAPKPRWQQAAERGMRKMEERAKRPSFSDGVPLPPEPE FT EPDVPPDLYGYPADEGIPEPQTPQATSNYVVDHDEEEEMVREAAQGVGNRDHRDAMTVA FT VDILSEELGARQL" FT misc_feature 221498..221929 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 221507..222085 FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA)" FT misc_feature 221522..221545 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 221843..222082 FT /note="ProfileScan hit to PS50150, Replication factor C FT conserved domain." FT misc_feature 222491..222643 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature 222626..222664 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT repeat_region 222632..222679 FT /note="4x PEP(A/K/R)" FT misc_feature 222947..223012 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT repeat_region 222983..223030 FT /note="4x PEPK" FT misc_feature 222983..223372 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 223019..223069 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature 223106..223183 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT CDS 223595..223915 FT /transl_table=11 FT /locus_tag="DIP0260" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis protein FT Rv3716c or MT3819 or MTV025.064c SW:Y1B6_MYCTU (O69683) FT (133 aa) fasta scores: E(): 2.7e-14, 54.16% id in 96 aa" FT /db_xref="InterPro:IPR004401" FT /db_xref="UniProtKB/Swiss-Prot:Q6NJY1" FT /protein_id="CAE48765.1" FT /translation="MTQPDMSQILAQAQQMQAKLQEAQREILATTVTGTAGNGLVSIDM FT QGNGMVSSVTIDPKVVDADDVETLQDLLVGAFAEAHEKLGTLAEQKMGPLSQGFDGLGG FT MF" FT misc_feature 223601..223885 FT /note="HMMPfam hit to PF02575, Uncharacterized BCR, YbaB FT family COG0718" FT CDS 223919..224575 FT /transl_table=11 FT /gene="recR" FT /locus_tag="DIP0261" FT /product="recombination protein" FT /note="Similar to Mycobacterium tuberculosis recombination FT protein RecR or Rv3715c or MT3818 or MTV025.063C FT SW:RECR_MYCTU (O69682) (203 aa) fasta scores: E(): 1.1e-33, FT 62.38% id in 218 aa, and to Streptomyces coelicolor FT recombination protein RecR or SC66T3.29c SW:RECR_STRCO () FT (199 aa) fasta scores: E(): 5.7e-28, 55.04% id in 218 aa" FT /db_xref="GOA:Q6NJY0" FT /db_xref="InterPro:IPR015967" FT /db_xref="UniProtKB/Swiss-Prot:Q6NJY0" FT /protein_id="CAE48766.1" FT /translation="MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDA FT LGAIRDGVTFCRICCNISREEVCRICADSSRDRSTICVVEEPKDIQVIERTGEYTGRYH FT VLGGSLDPLANIGPRELNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVILATD FT PNTEGEATASYLARLLRDFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL" FT misc_feature 224027..224152 FT /note="HMMPfam hit to PF02132, RecR protein" FT misc_feature 224084..224149 FT /note="ScanRegExp hit to PS01300, RecR protein signature." FT misc_feature 224153..224470 FT /note="HMMSmart hit to SM00493, No definition" FT misc_feature 224153..224497 FT /note="HMMPfam hit to PF01751, Toprim domain" FT CDS complement(224581..225333) FT /transl_table=11 FT /locus_tag="DIP0262" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT cobyric acid synthase MT3816 TR:AAK48185 (EMBL:AE007178) FT (231 aa) fasta scores: E(): 1.3e-31, 58.13% id in 246 aa, FT and to Streptomyces coelicolor hypothetical 26.2 kDa FT protein 2SCG58.13 TR:Q9FCA0 (EMBL:AL391017) (242 aa) fasta FT scores: E(): 6.6e-20, 42.85% id in 252 aa" FT /db_xref="GOA:Q6NJX9" FT /db_xref="InterPro:IPR011698" FT /db_xref="UniProtKB/TrEMBL:Q6NJX9" FT /protein_id="CAE48767.1" FT /translation="MSELTIGLILPDVLGTYGDDGNALVLRQRARLRGISAEIHTVRLG FT EAVPEGLDLYCLGGGEDTAQILAAEHLNNDRGLRRAADSGRPILGICAGLQVLGRSFRA FT SGKIVEGVGLIDATTASLAKRTIGELQSTPTAAGFTAELTEPLTGFENHMGATILGPDA FT QPLGAVTRGVGNTDLHGITTASVSDEQVSYEGAVQGNVVCTYMHGPALARNPQLADLLL FT AKAMGIALADLAPLDLPVVDQLRKERLA" FT misc_feature complement(224584..225315) FT /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide FT synthase" FT CDS complement(225335..226597) FT /transl_table=11 FT /locus_tag="DIP0263" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 43.4 kDa protein Rv3712 or MTV025.060 TR:O69679 FT (EMBL:AL022121) (413 aa) fasta scores: E(): 2.3e-86, 59.95% FT id in 412 aa, and to Streptomyces coelicolor putative FT ligase 2SCG58.12 TR:Q9FCA1 (EMBL:AL391017) (412 aa) fasta FT scores: E(): 4.3e-59, 43.03% id in 409 aa" FT /db_xref="GOA:Q6NJX8" FT /db_xref="InterPro:IPR013564" FT /db_xref="UniProtKB/TrEMBL:Q6NJX8" FT /protein_id="CAE48768.1" FT /translation="MSFNLRTRLAIGAAAVATTASRATGRGSGGMIGGLIAEKIDPNIM FT QSLAKTRPTALVTGTNGKSTTTRMLASAVRAQHTVATNEGGDNMDAGIISALMAGQSAS FT HVVLEVDELHVPSAADRLHPQCLILLNLTRDQLDRVGEINKIERALRDCVTAHPDMTVI FT ANCDDVLVTSVAYDAPNVVWVSAGAGWTGDSVSCPRTGSHIVRQDDHWYATKPLPNGET FT FQRPTPAWTITPDGILTPGHAEPVPLSLALPGNANRGNATQAIAAAVTCFNVPLDDAVR FT AVETVDDVAGRYSTITLGEHQIHLLLAKNPAGWQEALSMVDRTAEGLVIAVNGQVADGE FT DLSWLWDVKFEELEELSVKAAGERGTDLSVRLTYASVDHELVRDPLAAIKACPAGRVEV FT LANYTAFRDLKRAITAATKEA" FT misc_feature complement(226193..226429) FT /note="HMMPfam hit to PF01225, Mur ligase family, catalytic FT domain" FT CDS complement(226618..227739) FT /transl_table=11 FT /locus_tag="DIP0264" FT /product="Putative helicase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 DNA FT polymerase III, epsilon subunit MT3814 TR:AAK48182 FT (EMBL:AE007178) (329 aa) fasta scores: E(): 1.3e-07, 25.37% FT id in 335 aa, and to Bacillus subtilis probable FT ATP-dependent helicase DinG homolog SW:DING_BACSU (P54394) FT (931 aa) fasta scores: E(): 0.48, 24.07% id in 108 aa" FT /db_xref="GOA:Q6NJX7" FT /db_xref="UniProtKB/TrEMBL:Q6NJX7" FT /protein_id="CAE48769.1" FT /translation="MNVSLPTRPPARLFPMTNKDQEERDKARAQRAAEQAAARKAEIEK FT APYVALSVQASGIHPSTSRLVTIDAVTFTEQGEEVDHFFAVLNPESNPGPFHLHGLSPE FT QIQEGKRYSQILKALDRLIDGRTLLVHNAELVWGFIVSESKRAMSNAARANRSRSRQRN FT RRRQRVGHIPKPVTIVDTLATARRLGLTFADIRIRNVATQLGLEAPDARASVARAQADT FT AQLTREDTLLVARMFFVEHAQGAVSSTSPADLRADRFGLQRSNVRVDAMEVPRVWENPG FT VYTKERGLVQGMEVVVAPEITMDPDRIIQAIVRTELAYNEKITRASSLVVCNKREDLTG FT KAMHGDRKGIPLMTDEEFLRAVEHVKPGKPAET" FT CDS complement(227743..228507) FT /transl_table=11 FT /locus_tag="DIP0265" FT /product="Putative nitroreductase" FT /note="Similar to Escherichia coli oxygen-insensitive NADPH FT nitroreductase NfsA or MdaA or Mda18 or B0851 SW:NFSA_ECOLI FT (P17117) (240 aa) fasta scores: E(): 2e-23, 36.32% id in FT 223 aa" FT /db_xref="GOA:Q6NJX6" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:Q6NJX6" FT /protein_id="CAE48770.1" FT /translation="MKASMNETIRTQLNHRTIREFSTEQVSEEIMEQLFAVAGRTATSL FT GMQSTSIIRVTDPQLRVRLAEIGAQEYVGRAPIYLLFIVDCHRNAGILQELGADPAGAA FT TARNFVQGFTDACLTAQNVCIAAESMGLGVNFLGNVHNDAAAVIELLQLPELTFPVVGM FT TLGWPNQEPQLKPRMATPLRTMENGYHAPDSWLEALSDYDQEMTTYYDLRDANRRVDSF FT TRQVLAKNPAAGADSDKRNHTFAIARDQGFNL" FT misc_feature complement(227983..228489) FT /note="HMMPfam hit to PF00881, Nitroreductase family" FT CDS complement(228555..230372) FT /transl_table=11 FT /gene="leuA" FT /locus_tag="DIP0266" FT /product="2-isopropylmalate synthase" FT /EC_number="2.3.3.13" FT /note="Similar to Corynebacterium glutamicum FT 2-isopropylmalate synthase LeuA SW:LEU1_CORGL (P42455) (616 FT aa) fasta scores: E(): 2.5e-205, 83.27% id in 604 aa" FT /db_xref="GOA:Q6NJX5" FT /db_xref="InterPro:IPR000891" FT /db_xref="UniProtKB/TrEMBL:Q6NJX5" FT /protein_id="CAE48771.1" FT /translation="MTSPDTFISAPAAIVTPRGDKAPGQAPWNTQRNSSMAVNRYQPFH FT VEVENIDLPDRTWPQKRITKAPQWCAVDLRDGNQALIDPMSPERKRRMFNLLVNMGYKE FT IEVGFPSASQTDFDFVREIIENNMIPNDVTIQVLVQAREHLIRRTFEACEGAKNVIVHF FT YNSTSILQRDVVFRKDKAAIKKLATDAAELIKSIAVDYPDTNWRWEYSPESYTGTELTY FT AKEVVDAVVAVMDPTPENPIIINLPSTVEMITPNVYADGIEWMHRNLNRRDSIILSLHP FT HNDRGTGVAAAELGYLAGADRIEGCLFGNGERTGNVCLVTLGLNMFTQGVDPQIDFSDI FT DQIRRTVEYCNQLRVPERHPYGGDLVFTAFSGSHQDAVNKGLDAMASRVHPGATHTEVS FT WDELRGETWEVPYLPIDPKDVGRNYEAVIRVNSQSGKGGVAYIMKTDHGLALPRPMQVE FT FSSIVQEVTDAEGGEVNSKNMWDIFAREYLDSTSPVEQVSMSVNAAETENDEARIHARL FT IVNGSETTIEGHGNGPIAAYANALESLGIDVEVQEYEQHARTAGDDAEAAAYILAEVNG FT KKFWGVGIAGSITYASLKAITSAVNRALS" FT misc_feature complement(229284..230156) FT /note="HMMPfam hit to PF00682, HMGL-like" FT misc_feature complement(229503..229544) FT /note="ScanRegExp hit to PS00816, Alpha-isopropylmalate and FT homocitrate synthases signature 2." FT misc_feature complement(230103..230153) FT /note="ScanRegExp hit to PS00815, Alpha-isopropylmalate and FT homocitrate synthases signature 1." FT CDS 230521..231552 FT /transl_table=11 FT /locus_tag="DIP0267" FT /product="Putative regulatory protein" FT /note="Similar to Bacillus subtilis deoxyribonucleoside FT regulator DeoR SW:DEOR_BACSU (P39140) (313 aa) fasta FT scores: E(): 6.6e-43, 42.9% id in 303 aa" FT /db_xref="GOA:Q6NJX4" FT /db_xref="InterPro:IPR007324" FT /db_xref="UniProtKB/TrEMBL:Q6NJX4" FT /protein_id="CAE48772.1" FT /translation="MNPVSCARYPTMWNMLWGVSWLGVEWGKNVHMIDARDCLALDAAK FT LYYVTGLGQAQVAKELGISRPTVSKLLSHARDKGFVTISLNDPREVAGGYVEKLCARYG FT LADVRVVQSPAMGRGLTGELGNAGAALLEEVVKDGMTVGVSWGDTMLAVSEHLRTLPLV FT DVKVVQLKGGHSHTARNTNDMVTLTRFSRALNAEMMMLPLPVILDSKEAKELVVKDRHI FT ASMLNLGAHCDVAVFTVGAVKSESLLLNLGYLSPSEQARLMEHAVGDVCSRFYDAQGEV FT ADPDIDARTVGISLADLKKRPVRVLVAGGLEKAPAIEAALRTGVATHVVIDHATAQRVV FT EMA" FT misc_feature 230674..230739 FT /note="Predicted helix-turn-helix motif with score 2347 FT (+7.18 SD) at aa 52-73, sequence LGQAQVAKELGISRPTVSKLLS" FT CDS 231758..232858 FT /transl_table=11 FT /locus_tag="DIP0268" FT /product="Conserved hypothetical protein" FT /note="C-terminal region similar to C-terminal region of FT Mycobacterium tuberculosis hypothetical 58.9 kDa protein FT Rv2100 precursor or MT2160 or MTCY49.40 SW:YL00_MYCTU FT (Q10709) (550 aa) fasta scores: E(): 7.5e-09, 35.11% id in FT 131 aa" FT /db_xref="GOA:Q6NJX3" FT /db_xref="InterPro:IPR003615" FT /db_xref="UniProtKB/TrEMBL:Q6NJX3" FT /protein_id="CAE48773.1" FT /translation="MNTTGETTQPFYSHCDMNDPLCRAERLRIQFDYYRWHSLQPDDND FT DVDTYTADIATRIGKTQRYVCDHLDAIYYLTQLPQLHTVYQQLWHLDDTRLITITRIIS FT ALPTTYYDAIDTHLTRWLTPTQPAQTIPSTRAITRFLRKTITHLGFHLDNTRKPEQYVY FT IYDAGHGLAGIDALIHAGVAELLETTLRSIKKTHSCDDSTALQLLLEDKTSVVINLYDT FT GTGITYTPQGTALPQVPEHLVIRVLGDADVAVSTGYRFTEAMRRFIQGRDGVCRFPGCG FT VPAQWCDIDHVEEYDLGGVTGAVNAQCLCRHHHNVKTSRRVDCEIGAGGVVTWQIGDRR FT VVTTPEGVLAGQTFRQRREKKIKKAA" FT misc_feature 232544..232702 FT /note="HMMSmart hit to SM00507, HNH nucleases" FT misc_feature 232580..232720 FT /note="HMMPfam hit to PF01844, HNH endonuclease" FT repeat_region complement(232940..232968) FT /note="Possible inverted repeat" FT repeat_region complement(232940..234244) FT /note="repX" FT CDS complement(join(232956..233060,233065..233118, FT 233181..233387,233387..233554,233569..233826)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0269" FT /product="Putative transposase (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium glutamicum FT DNA, transposable element IS31831 TR:Q45144 (EMBL:D17429) FT (436 aa) fasta scores: E(): 1.8e-14, 39.2% id in 403 aa, FT and to Mycobacterium smegmatis TnpA protein TR:Q50440 FT (EMBL:M76495) (413 aa) fasta scores: E(): 5.4e-07, 35.42% FT id in 223 aa. Presents internal in-frame stop codons, FT multiple frameshifts at residues 86, 141, 209 and 227 and FT lacks final stop codon" FT repeat_region complement(233952..233980) FT /note="Possible inverted repeat" FT CDS 234348..235064 FT /transl_table=11 FT /gene="deoD" FT /gene_synonym="punB" FT /locus_tag="DIP0271" FT /product="purine nucleoside phosphorylase II" FT /EC_number="2.4.2.1" FT /note="Similar to Bacillus stearothermophilus purine FT nucleoside phosphorylase II DeoD or PunB SW:DEOD_BACST FT (P77835) (234 aa) fasta scores: E(): 8.6e-40, 49.56% id in FT 230 aa, and to Staphylococcus aureus purine nucleoside FT phosphorylase Pnp or SA0131 TR:Q99X79 (EMBL:AP003129) (235 FT aa) fasta scores: E(): 1.3e-60, 69.52% id in 233 aa" FT /db_xref="GOA:Q6NJX2" FT /db_xref="HSSP:1K9S" FT /db_xref="InterPro:IPR018017" FT /db_xref="UniProtKB/TrEMBL:Q6NJX2" FT /protein_id="CAE48775.1" FT /translation="MAEKSTPHINPKGVDIAETVLLPGDPLRAKFIADTYLEDVVQFNS FT VRNMLGFTGTYQGTPVSVMGSGMGMPSIGIYSYELINFFDARNVIRVGSIGAMQKDIDL FT YEIIVAASASTDSNFLEQYNLPGTYAPTASWTLLRAFMDEADRKGKKVHVGNILSSDVF FT YNADNTVNERWARMGVLGVEMESAALYSIAAYAGANALGVFTVSDNLFTGARTTAEERE FT SAFTDMMELALPLARA" FT misc_feature 234399..235055 FT /note="HMMPfam hit to PF01048, Phosphorylase family" FT misc_feature 234540..234587 FT /note="ScanRegExp hit to PS01232, Purine and other FT phosphorylases family 1 signature." FT misc_feature 234768..234794 FT /note="ScanRegExp hit to PS00039, DEAD-box subfamily FT ATP-dependent helicases signature." FT CDS 235061..236425 FT /transl_table=11 FT /locus_tag="DIP0272" FT /product="Putative antibiotic resistance protein (membrane FT protein)" FT /note="Similar to Staphylococcus aureus SA0132 protein FT TR:Q99X78 (EMBL:AP003129) (450 aa) fasta scores: E(): FT 3.5e-67, 46.1% id in 436 aa, and to Bacillus subtilis FT tetracycline resistance protein TetB or Tet SW:TCRB_BACSU FT (P23054) (458 aa) fasta scores: E(): 1.3e-23, 26.3% id in FT 403 aa" FT /db_xref="GOA:Q6NJX1" FT /db_xref="InterPro:IPR006311" FT /db_xref="UniProtKB/TrEMBL:Q6NJX1" FT /protein_id="CAE48776.1" FT /translation="MTTHNATLKPTDPKAAVPVLLFSFVFCLIVDNGFKTMTGPMAEGL FT GIDPNTASLQASLAGVIIGIGAVVYAALADAISIRKLMLIGIGLVVVGSVIGFVFSGSW FT PLVLAGRLIQTGGLAAAETLYVIYVTKHLAAEDQKTYLGFSTAAFQSGLLVGALTSGAI FT STYIGWRVMFLVPLILIVAVPFILKTVPEEEASSSHLDVVGLFLIAIFATSVIQYMQAF FT KLFWLAFMLVSIVIFVWYVRNAKNPVVNPEFFKNGRYVWAILLVLIVYSTQLGYIVLLP FT FAAKEFHGLDQAQASYLMIPGYICAVLIGIFSGKIGKLMTSRRTIFTALGMIIVALVVG FT ALAIQVHVAVAIASIILFASGFALLYAPLVNTALANILPEKSGVAIGFYNLTINIGVPL FT GIAYTFKLMNLSIGTNAVIWILAAIAVVGAVMYFIADRALFSREKAAGIDSVANH" FT misc_feature 235124..236380 FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT misc_feature order(235211..235279,235313..235381,235394..235447, FT 235481..235549,235559..235627,235664..235717, FT 235730..235783,235841..235909,235937..235996, FT 236033..236092,236102..236170,236207..236275, FT 236303..236362) FT /note="13 probable transmembrane helices predicted for FT DIP0272 by TMHMM2.0" FT misc_feature 235295..235363 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235391..235453 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235556..235630 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235733..235789 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235835..235912 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235940..236014 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT CDS 236460..237116 FT /transl_table=11 FT /gene="deoC" FT /locus_tag="DIP0273" FT /product="deoxyribose-phosphate aldolase" FT /EC_number="4.1.2.4" FT /note="Similar to Mycobacterium tuberculosis FT deoxyribose-phosphate aldolase DeoC or Rv0478 or MT0496 or FT MTCY20G9.04 SW:DEOC_MYCTU (Q11138) (224 aa) fasta scores: FT E(): 2.4e-37, 57.07% id in 219 aa, and to Bacillus subtilis FT deoxyribose-phosphate aldolase DeoC or Dra SW:DEOC_BACSU FT (P39121) (211 aa) fasta scores: E(): 3.2e-25, 46.53% id in FT 202 aa" FT /db_xref="GOA:Q6NJX0" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:Q6NJX0" FT /protein_id="CAE48777.1" FT /translation="MTTRNDVAQMIDHTLLKPEATTDDFKALIADAVRLGTYSVCVSPS FT ALPVEVPENLHVATVVGFPSGAVKPEIKAAEAARTVADGAEEVDMVINIALAKEGKFDE FT LEAEIKAVRDAVPAPGILKVILETAALTDDEIVAACKASENAGADFVKTSTGFHPAGGA FT SVHAVEIMHATVGGRLGIKASGGIRTAKDALAMIEAGATRLGLSASAAILEELGE" FT misc_feature 236472..237101 FT /note="HMMPfam hit to PF01791, Deoxyribose-phosphate FT aldolase" FT misc_feature 236988..237095 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 237124..238776 FT /transl_table=11 FT /locus_tag="DIP0274" FT /product="Putative mutase" FT /note="Similar to Streptomyces coelicolor putative FT phosphomannomutase SCK13.08c TR:Q9AD82 (EMBL:AL512667) (549 FT aa) fasta scores: E(): 7.9e-86, 46.75% id in 554 aa" FT /db_xref="GOA:Q6NJW9" FT /db_xref="InterPro:IPR016055" FT /db_xref="UniProtKB/TrEMBL:Q6NJW9" FT /protein_id="CAE48778.1" FT /translation="MSYAELERTAREWADHDPDPRTKETIEGWLKTHDEESLQQAFNGP FT LTFGTAGLRARVGAGESQLSLAVILRTTYGLVDWVKTQLGADATPTIVIGCDARHGSLE FT FHQAAAEVVSAAGGRALLLPAKNPTPLTAFSVKKFGADAGIMVTASHNPPADNGYKVYL FT GGRIAQGPAEGVQLISPADKEISEAIAAAPYADEIPRTTDNIEHVDPREDYLTRALTLA FT DKKSDILIALTAMHGVGAALGEKVLTAAGFNVSLVPEQAEPDPDFPTVSFPNPEEKGAL FT DLAKAHANTIGADVIIAYDPDADRCAVATPDANAEGGWRQLSGDETGAVLGAYRASVAK FT PGSMANSIVSGRLLSKIAEAAGRTHATTLTGFKWIARTPELVFGYEEAIGFCCDPEAVA FT DKDGVSASVVVASLVSALKAEGRTLDDALDDLAREHGLYQTAPLTFRVDDLSIIARAMS FT |