EBI Dbfetch

ID   BT082032; SV 1; linear; mRNA; STD; INV; 1929 BP.
XX
AC   BT082032;
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DT   15-APR-2009 (Rel. 100, Created)
DT   15-APR-2009 (Rel. 100, Last updated, Version 1)
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DE   Drosophila melanogaster MIP04264 full insert cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-1929
RA   Carlson J., Booth B., Frise E., Sandler J., Wan K., Yu C., Celniker S.;
RT   ;
RL   Submitted (14-APR-2009) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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DR   FLYBASE; FBgn0033499; CG12914.
DR   FLYBASE; FBgn0033500; CG12913.
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was identified and sequenced for the modENCODE project
CC   using a high-throughput targeted cDNA library screening process
CC   (Wan et al....). The sequence has been subjected to integrity
CC   checks for sequence accuracy, presence of a polyA tail and
CC   contiguity within 200 kb in the genome. Thus we believe the
CC   sequence to reflect accurately this particular cDNA clone. However,
CC   there are artifacts associated with the generation of cDNA clones
CC   that may have not been detected in our initial analyses such as
CC   internal priming, priming from contaminating genomic DNA, retained
CC   introns due to reverse transcription of unspliced precursor RNAs,
CC   and reverse transcriptase errors that result in single base
CC   changes. For further information about this sequence, including its
CC   location and relationship to other sequences, please visit our Web
CC   site (http://www.fruitfly.org) or send email to cdna@fruitfly.org.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1929
FT                   /organism="Drosophila melanogaster"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   gene            1..1929
FT                   /map="2R"
FT                   /gene="CG12913-RA"
FT   CDS             159..1781
FT                   /codon_start=1
FT                   /gene="CG12913-RA"
FT                   /product="MIP04264p"
FT                   /note="Longest ORF"
FT                   /db_xref="GOA:A1Z863"
FT                   /db_xref="InterPro:IPR008428"
FT                   /db_xref="UniProtKB/TrEMBL:A1Z863"
FT                   /protein_id="ACO72869.1"
FT                   /translation="MHNSLVTKLLLRLLLLFALLTGASIVVLTKCGFDELTTRETQANN
FT                   PSESSGFSYTLSEREAEIERLKQEVLALRTQILFLQNNRSTAKPSNGSLQLQETTAGPP
FT                   TAPLGHHYDCSSYIRKQVGAAEILHGLPLNNEYELIPYNHFTFTRVYPIDLGLGKRVVE
FT                   KPIGYRRRDLIEAVNKALESLNRNHSARIRAKGAGSAAAYASDVIKYTLDDFIEGIYRN
FT                   EPTTGTQYELYFQSVKHQASPVRRALVMRPFAPLQTVQLSELSSSVDNSGAPPSHSPPI
FT                   IHVILPLAGRLHSFRGFLQMFAKLEDRRLELIVVYFGTSGLEQARSLAGRSQRTQFLAL
FT                   NETFSRAKALRLGAEHIQPAEEDVLLFMCDVDIMFTTKFLERCRWNAAPGKKVYYPVVF
FT                   SLYNPHVVYSLQGKPLPSEEEQLVISRDTGFWRDFGYGMTCQYRSNFLKVRGFDEEEIV
FT                   GWGGEDVMLYRKYVRSKIKIIRATDPGIFHRWHTKICSSSLTADQYRACIRSRALNEAS
FT                   HAQLGFLAFRDDIAAANAAKMTS"
XX
SQ   Sequence 1929 BP; 491 A; 488 C; 509 G; 441 T; 0 other;
     ttgccggaaa atcgataact gtttccatgg cacgcgcatc ttaagcaaaa acgctgaatg        60
     taaataaatg gctctgtccg cgaaacgttt ccataaaact tcggtggact tgatgggtcc       120
     ggttaaagtg ttgaaaattt tgtaagaaac tatggaaaat gcataactcc ctggtgacca       180
     agttgctgct gcggcttttg ctgctcttcg ccttgttgac cggcgcctcc attgtggtgc       240
     tcacaaagtg cggattcgat gaactgacga cgagggaaac tcaagccaat aatccgagtg       300
     aatccagcgg attcagttac accttaagcg aacgagaggc ggaaattgag cggctgaaac       360
     aggaagtcct ggctctccgc actcaaatcc tctttctaca gaataatcgc agcactgcca       420
     agccatcaaa tggcagtctt caattgcaag aaaccaccgc ggggccacca actgcaccac       480
     tgggtcacca ttacgactgc agcagctata ttcgcaagca ggtgggcgcc gcagaaattc       540
     tgcatggact gccgctgaac aacgagtacg agctgatacc ctacaatcac ttcaccttca       600
     cgcgagtata tcccatcgac ttgggcctgg gaaagcgcgt ggtggagaag cccatcggtt       660
     atcgacgacg tgacctcatc gaggcggtaa acaaggcgct ggagagcctg aacaggaatc       720
     actcagcgag aatacgagcc aagggagctg gttctgcagc ggcttacgcc tcggatgtga       780
     tcaaatacac cctggatgac tttatcgagg gcatataccg caacgaaccc accacaggca       840
     cccagtacga gctgtacttc cagagtgtca agcaccaggc gagtccagtg cggagagccc       900
     tggtcatgcg accatttgct cctctgcaaa cggtgcagct atcggagcta tcttccagtg       960
     tggataatag tggtgcccct ccaagtcata gtccgcccat aatccacgtg atactaccgc      1020
     tggctggacg tctgcacagc tttcgcggct tcctgcagat gttcgccaag ctagaggatc      1080
     gtcgcctgga gcttattgtg gtgtactttg gaaccagtgg attggagcaa gctaggagcc      1140
     tggctggacg atcccaaagg actcagtttt tggcactcaa tgagactttc agtagggcca      1200
     aagctttaag actgggagcg gagcacattc aacccgctga ggaggacgtg ctgctcttca      1260
     tgtgcgacgt ggacattatg ttcacgacca agttcctgga gcgttgtcgc tggaatgcag      1320
     cgcctggaaa gaaggtctac taccccgtcg tatttagcct gtacaatccg catgtggtgt      1380
     actcactgca gggcaagccc ttgcccagcg aagaggagca actggtgata tcgagggaca      1440
     ccggtttctg gcgggacttt ggctacggaa tgacgtgcca gtaccgctcg aacttcctaa      1500
     aggtgcgcgg tttcgacgag gaggagattg tcggttgggg cggcgaggat gtgatgctat      1560
     accgaaagta tgttcgatca aaaatcaaga taatcagggc caccgacccg ggaatctttc      1620
     accgctggca caccaagatc tgttccagtt ccctgacagc cgatcagtat cgggcctgca      1680
     ttcgatcgag ggccttgaat gaggcctcgc acgcccaact gggattcctg gctttccggg      1740
     atgatatagc cgcggctaat gcggcaaaga tgacatcgtg atactcgact attccccatg      1800
     tatccccaat cgcttggctt ctctacttaa gtgtgtgtga atggagagca gtgatatagt      1860
     tgaaatgtct agggttttct aacaattata gcttttattc catttcgttt taaaaaaaaa      1920
     aaaaaaaaa                                                              1929
//