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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT048246; SV 1; linear; mRNA; STD; VRT; 1377 BP.
XX
AC   BT048246;
XX
DT   19-OCT-2008 (Rel. 97, Created)
DT   03-MAR-2009 (Rel. 100, Last updated, Version 2)
XX
DE   Salmo salar clone ssal-eve-541-293 Probable arylformamidase putative mRNA,
DE   complete cds.
XX
KW   FLI_CDNA.
XX
OS   Salmo salar (Atlantic salmon)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Protacanthopterygii;
OC   Salmoniformes; Salmonidae; Salmoninae; Salmo.
XX
RN   [1]
RP   1-1377
RG   cGRASP (B.F. Koop & W.S. Davidson)
RA   Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA   Koop B.F.;
RT   "Salmo salar full-length cDNAs";
RL   Unpublished.
XX
RN   [2]
RP   1-1377
RG   cGRASP (B.F. Koop & W.S. Davidson)
RA   Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA   Koop B.F.;
RT   ;
RL   Submitted (18-OCT-2008) to the EMBL/GenBank/DDBJ databases.
RL   Biology - Centre for Biomedical Research, University of Victoria, Victoria,
RL   BC V8W 2Y2, Canada
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1377
FT                   /organism="Salmo salar"
FT                   /mol_type="mRNA"
FT                   /clone="ssal-eve-541-293"
FT                   /tissue_lib="full-length biased cDNA library"
FT                   /tissue_type="thyroid"
FT                   /db_xref="taxon:8030"
FT   gene            1..1377
FT                   /gene="AFMID"
FT   CDS             254..1138
FT                   /codon_start=1
FT                   /gene="AFMID"
FT                   /product="Probable arylformamidase"
FT                   /note="predicted complete coding region. syn. - Kynurenine
FT                   formamidase, KF"
FT                   /db_xref="GOA:B5XB27"
FT                   /db_xref="UniProtKB/Swiss-Prot:B5XB27"
FT                   /protein_id="ACI68047.1"
FT                   /translation="MSRWKDMNKDELERQFSPSQWSHRMSADDVIKSHVTALKEGTERA
FT                   RGLAQTLLNVPYGEGEGEKLDVYVPTTTSLDVPLVIYLHGGYWQFLSKEESGFMAVPLV
FT                   HKGVVVVAVGYDIAPKGNMDVMVSQVRRSVVSVIQQYSHISGLYLCGHSAGAHLAAMIL
FT                   STDWSQYSVTPQIKGAFLVSGIYDLLPILSTYVNEPLKMTEEVALRNSPSQLVPQLKLS
FT                   SSNCDIVVAVAQNDSPEFRKQSEDYYKALESTEGLKVTLEDVPNTDHFNIIEQLVDGDY
FT                   HLTQLLLKMMGKS"
XX
SQ   Sequence 1377 BP; 357 A; 350 C; 347 G; 323 T; 0 other;
     gggggactga ctgttagtac aaaatcttag cccttgtcgt taacaaataa acagctgttt        60
     atgtagaatt agccaactga aaccttttgc ctgagaacat tgggacaccc cgcagacact       120
     cgtcccgcag acccgttgac ccactgtcct cgatggtcgt ttttttcccc tgcttatctt       180
     ttgtccaatt ccaaaggttc tcagtgttgt gcctatcgca gtctatctgc tgttgttaca       240
     ttcaagagca acaatgtcac gttggaagga tatgaataag gatgagctag agaggcagtt       300
     ctcgcccagc cagtggtcgc acagaatgtc agcagacgac gttatcaaat cccacgtgac       360
     ggcgctcaaa gaaggtacgg agcgtgcccg tggcctggcc cagacccttc tcaacgttcc       420
     ctatggagaa ggagaggggg agaaactcga cgtctatgtt cccaccacca cttctctaga       480
     tgtcccactg gtaatctacc tccacggagg ctactggcag ttccttagta aggaggagtc       540
     cgggtttatg gctgtcccat tggtccataa gggcgtcgtg gtggtcgccg tgggttacga       600
     catcgctccc aaagggaaca tggatgtgat ggtgtctcag gtgcggagga gtgtggtgtc       660
     cgtcattcaa cagtattcac acattagtgg tctgtacctg tgtggccact ctgcgggggc       720
     ccacctggct gctatgatcc tctctacaga ctggtctcag tacagtgtga cccctcagat       780
     caaaggtgct ttcctggtca gtggtatata tgacctcctg cccatcctgt ccacctatgt       840
     caacgagcct ctgaaaatga cagaagaggt ggctctgagg aacagtccta gtcagctggt       900
     tccgcagctc aaactctcct cctccaactg tgacatcgtg gttgccgtgg cgcagaacga       960
     ctcgccagag ttccggaagc agtcggagga ctactacaaa gctctggagt caacagaagg      1020
     actgaaggta acattggagg acgttccaaa cacagatcac ttcaacatca tcgagcagct      1080
     agtcgacgga gactaccacc tcactcagct gctgttaaag atgatgggga agagctaaag      1140
     agatacaggg acaccggcca atcaatgaag agatacaggg acactggcca atcattgaag      1200
     agatacaggg acaccagaca atcattgaag agatactggg acactggcca atcattcatt      1260
     tacatatcaa acacaaacac ctctgttctg aaccacatct agaggcgcca cacaccagtt      1320
     attatggact gatggctatt ggctaaacaa ggtggttagg taacaggtat taagtcc         1377
//
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