EBI Dbfetch

ID   BT045907; SV 1; linear; mRNA; STD; VRT; 2010 BP.
XX
AC   BT045907;
XX
DT   10-OCT-2008 (Rel. 97, Created)
DT   10-OCT-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Salmo salar clone ssal-rgf-536-172 Alpha-1,6-mannosyl-glycoprotein
DE   2-beta-N-acetylglucosaminyltransferase putative mRNA, complete cds.
XX
KW   FLI_CDNA.
XX
OS   Salmo salar (Atlantic salmon)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Protacanthopterygii;
OC   Salmoniformes; Salmonidae; Salmoninae; Salmo.
XX
RN   [1]
RP   1-2010
RG   cGRASP (B.F. Koop & W.S. Davidson)
RA   Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA   Koop B.F.;
RT   "Salmo salar full-length cDNAs";
RL   Unpublished.
XX
RN   [2]
RP   1-2010
RG   cGRASP (B.F. Koop & W.S. Davidson)
RA   Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA   Koop B.F.;
RT   ;
RL   Submitted (08-OCT-2008) to the EMBL/GenBank/DDBJ databases.
RL   Biology - Centre for Biomedical Research, University of Victoria, Victoria,
RL   BC V8W 2Y2, Canada
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2010
FT                   /organism="Salmo salar"
FT                   /mol_type="mRNA"
FT                   /clone="ssal-rgf-536-172"
FT                   /tissue_lib="full-length cDNA library"
FT                   /tissue_type="mixed brain, kidney, spleen"
FT                   /db_xref="taxon:8030"
FT   gene            1..2010
FT                   /gene="MGAT2"
FT   CDS             437..1834
FT                   /codon_start=1
FT                   /gene="MGAT2"
FT                   /product="Alpha-1,6-mannosyl-glycoprotein
FT                   2-beta-N-acetylglucosaminyltransferase"
FT                   /note="predicted complete coding region. syn. - Mannoside
FT                   acetylglucosaminyltransferase 2,
FT                   N-glycosyl-oligosaccharide-glycoprotein
FT                   N-acetylglucosaminyltransferase II,
FT                   Beta-1,2-N-acetylglucosaminyltransferase II, GNT-II,
FT                   GlcNAc-T II"
FT                   /db_xref="GOA:B5X4D8"
FT                   /db_xref="InterPro:IPR007754"
FT                   /db_xref="UniProtKB/TrEMBL:B5X4D8"
FT                   /protein_id="ACI34169.1"
FT                   /translation="MRFRVYKRKVVILTLVVVVCGLAFWTSGKQKKSSGVVVLKEAEGA
FT                   RRSSSSQVQPQPQATPEVSRIPNVPPIAPVNETHPKNQPEKHLEKEEVVKPEVDNTTQV
FT                   YRGIVFQLNFDQTVRHEEKFRAARKKDDLVVVVQVHNRPDYLRLLVESLRKARGVESIL
FT                   LIFSHDFWSPEINQVVASVDFCQVLQIFFPFSIQLYPQEFPGHDPRDCPRDISKIDALK
FT                   LGCINAEYPDSFGHYREAKFSQTKHHWWWKLHFVWDRVRALKDHRGLVLLIEEDHFLSP
FT                   DFLHFLKLMSILKRENCPDCDILSLGSYGHISYPSKANKVEVKAWKSTEHNMGMALSRE
FT                   TYQKLIQCTDAFCTYDDYNWDWSLQHLTVTCLPSYWKVMVSEAPRVFHAGDCGMHHKKS
FT                   VCMPSSQKSKIDTILQSSSNQLFPKNLLITKRLPANGAGGVAPHVKNGGWGDIRDHELC
FT                   KSYPRLQ"
XX
SQ   Sequence 2010 BP; 528 A; 527 C; 522 G; 433 T; 0 other;
     ctttgtgcta gctagctagc tagctggctg gctaatgtgt tattttgccc agaaattggg        60
     agcaggagag aaggaatgga ggagaatgaa tacctcgatt catcgcaatg ttaatttcgg       120
     cagagaaagc tgcatagcac gactaatatt ttagtgggtt ccatgcacaa ctctacgctg       180
     cagcctctga gaccaacatg ccttatggga atctcaccag gcgtcactta tattccacaa       240
     agacacatgt ctacattcta aaaatttgcg ctagcaacaa gtgttagcaa ccaacagaat       300
     tttaaactgt tttctaccaa gactccctgc ctgcctcccc caagcacagc agtgccatta       360
     gaaattgcaa acctgccttt tttcagtttc tctacaatca actcctctcc cttcccaagg       420
     ggggtgactg cctgtcatga gattccgagt ctacaagagg aaggtggtga tactgacgct       480
     ggtggtggtg gtgtgtggcc tagccttctg gaccagtggg aagcagaaga agagtagtgg       540
     ggtggtggtc ctgaaagagg ctgagggggc gaggagaagc agcagtagcc aggtacagcc       600
     acagccgcag gccacacctg aagtcagccg gatacctaac gtaccaccca tcgcacctgt       660
     caacgagaca cacccgaaga accagcctga aaagcacctg gagaaagagg aggtggtaaa       720
     accagaggtg gacaacacca cccaggtcta ccgtggcatt gtgttccagc tcaactttga       780
     ccagacagtg agacatgagg agaagttcag ggcagcgagg aagaaggatg atctggtggt       840
     ggtggtccag gtgcacaaca gacctgacta cctgaggctg ctggtggaga gtctgaggaa       900
     ggccaggggc gtggagagca tcctgctcat cttcagccac gacttctggt cccctgagat       960
     caaccaggtg gtggcctcag tggacttctg ccaggtcctc cagatcttct ttcccttcag      1020
     catccaactg tacccccagg agttcccggg ccacgacccc agggactgcc ccagagacat      1080
     ttccaagata gacgccttaa agctgggttg catcaacgca gagtaccccg actcgttcgg      1140
     ccactaccgc gaggccaagt tttcccagac caagcaccac tggtggtgga agctgcactt      1200
     tgtgtgggac agggtccggg ccctgaagga ccaccggggt ctggtgcttc tcatcgagga      1260
     ggaccacttc ctctcccctg acttcctcca cttcctcaag ctgatgtcga tcctgaagag      1320
     ggagaattgc cccgactgtg acatcctatc tctggggagc tacggccaca tcagctaccc      1380
     cagtaaagct aacaaggtgg aggtgaaagc ctggaagtcc accgagcaca acatgggcat      1440
     ggctctgagc agggagacct accagaaact catccaatgc accgacgcct tctgcaccta      1500
     tgacgactac aactgggact ggtccctgca gcacctgacc gtgacctgtt tgccctccta      1560
     ctggaaggtc atggtgagcg aggcgccccg ggtcttccac gccggggact gcgggatgca      1620
     ccacaagaag tctgtgtgca tgccgtccag ccaaaagtcc aagatagata ccatcctaca      1680
     gagcagcagc aatcagctgt tccccaagaa cctgctgatt actaagagac ttccggctaa      1740
     cggggcaggg ggggtggcgc cccacgtgaa gaacggcggt tggggggaca ttagggacca      1800
     tgaactctgc aagagctacc ctcgattaca gtgaccttat tataattgtt aggcctatat      1860
     cgttactatt ctcttttttg catcctctga atttaagaaa aagaaagcct tttgaaaata      1920
     atcttcatgg aatatttctt catattgcct gttttatctg actcttccaa ataaaaagta      1980
     tgatgggaaa aaaaaaaaaa aaaaaaaaga                                       2010
//