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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT044519; SV 1; linear; mRNA; STD; INV; 1105 BP.
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AC   BT044519;
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DT   18-SEP-2008 (Rel. 97, Created)
DT   18-SEP-2008 (Rel. 97, Last updated, Version 1)
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DE   Drosophila melanogaster FI08434 full insert cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-1105
RA   Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S.;
RT   ;
RL   Submitted (16-SEP-2008) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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DR   FLYBASE; FBgn0039258; beta4GalT7.
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC   Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC   This clone was sequenced as part of a high-throughput process to
CC   sequence clones from the Drosophila Gene Collection The sequence
CC   has been subjected to integrity checks for sequence accuracy,
CC   presence of a polyA tail and contiguity within 100 kb in the
CC   genome. Thus we believe the sequence to reflect accurately this
CC   particular cDNA clone. However, there are artifacts associated with
CC   the generation of cDNA clones that may have not been detected in
CC   our initial analyses such as internal priming, priming from
CC   contaminating genomic DNA, retained introns due to reverse
CC   transcription of unspliced precursor RNAs, and reverse
CC   transcriptase errors that result in single base changes. For
CC   further information about this sequence, including its location and
CC   relationship to other sequences, please visit our Web site
CC   (http://www.fruitfly.org) or send email to cdna@fruitfly.org.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1105
FT                   /organism="Drosophila melanogaster"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   gene            1..1105
FT                   /map="3R"
FT                   /gene="beta4GalT7-RA"
FT   CDS             98..1066
FT                   /codon_start=1
FT                   /gene="beta4GalT7-RA"
FT                   /product="FI08434p"
FT                   /note="Longest ORF"
FT                   /db_xref="GOA:Q9VBZ9"
FT                   /db_xref="HSSP:1NMM"
FT                   /db_xref="InterPro:IPR003859"
FT                   /db_xref="UniProtKB/TrEMBL:Q9VBZ9"
FT                   /protein_id="ACH95293.1"
FT                   /translation="MVNISTINWVFVCGLSFCLGGIAVLSLMPLGSDCVCPLSNPLAKL
FT                   AGGGEGVSVIKKEPADEKQPQPHDHGASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQ
FT                   GVAHHIFVLNQVDRFRFNRASLINVGFQFASDVYDYIAMHDVDLLPLNDNLLYEYPSSL
FT                   GPLHIAGPKLHPKYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAG
FT                   LQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNVKYKILKV
FT                   HEMLIDQVPVTILNILLDCDVNKTPWCDCSGTAAAASAVQT"
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SQ   Sequence 1105 BP; 287 A; 289 C; 286 G; 243 T; 0 other;
     gcacacttcc aaccggcagc taaaaagttt ataatatttt ccgcctatgg cccgacttcg        60
     ttcaaaccac tggacttctg tataaaagcg gctccaaatg gtgaatatat ccaccataaa       120
     ctgggtcttc gtctgcggcc tgtccttttg cctgggcggg attgcggtgc tcagtctcat       180
     gccattggga tcagactgcg tgtgcccgct gtccaatccg ctggccaagc ttgccggtgg       240
     cggagaagga gtatccgtga ttaagaaaga gccagccgat gagaagcagc cacagccaca       300
     tgaccacggt gcgtccgtac acaagatggc actgctggtg ccgtttcgag accgatttga       360
     ggaactcctc cagttcgtcc cccacatgac cgcctttttg aagcggcagg gcgtggcgca       420
     ccacatcttt gtgctgaacc aggtggacag gttccgcttc aatcgcgcct ctctcatcaa       480
     cgtgggtttc cagtttgcca gcgatgtgta cgattacatt gccatgcacg acgtagactt       540
     gctgcccttg aatgacaatc tgctctatga gtatcccagc agcttgggac cactgcacat       600
     cgccggaccg aagctacatc ccaaatacca ctatgataac ttcgttggag gaatattact       660
     ggtgcgacgc gagcacttta agcagatgaa cggcatgtcg aaccagtact ggggctgggg       720
     attagaggac gacgagttct tcgtgcgcat ccgggatgca ggactgcagg tgacgcggcc       780
     gcagaacatt aagactggca ctaatgatac attcagccat attcacaacc gctatcatcg       840
     taagcgggac acccagaagt gcttcaacca gaaggagatg acccgcaagc gggaccacaa       900
     gacgggcctg gacaacgtga agtacaaaat acttaaggtg catgagatgc tcattgacca       960
     ggtgccggtg accatcctca acattttgct cgattgtgat gttaataaaa cgccttggtg      1020
     cgactgttcc ggaacggcag cggctgcatc ggcggtacaa acctgatggg ttgtgttaaa      1080
     ccaaaaaaaa aaaaaaaaaa aaaaa                                            1105
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