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EBI DbfetchID BT030585; SV 1; linear; mRNA; STD; MAM; 1983 BP. XX AC BT030585; XX DT 08-MAY-2007 (Rel. 91, Created) DT 27-NOV-2008 (Rel. 97, Last updated, Version 2) XX DE Bos taurus phenylalanine hydroxylase (PAH), mRNA, complete cds. XX KW FLI_CDNA. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RP 1-1983 RX DOI; 10.1007/s00335-001-2145-4 RX PUBMED; 12140684. RA Sonstegard T.S., Capuco A.V., White J., Van Tassell C.P., Connor E.E., RA Cho J., Sultana R., Shade L., Wray J.E., Wells K.D., Quackenbush J.; RT "Analysis of bovine mammary gland EST and functional annotation of the Bos RT taurus gene index"; RL Mamm. Genome 13(7):373-379(2002). XX RN [2] RP 1-1983 RX DOI; 10.1186/1471-2164-6-166 RX PUBMED; 16305752. RA Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L., RA Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.; RT "Characterization of 954 bovine full-CDS cDNA sequences"; RL BMC Genomics 6:166-166(2005). XX RN [3] RP 1-1983 RA Harhay G.P., Sonstegard T.S., Van Tassell C.P., Clawson M.L., Heaton M.P., RA Keele J.W., Snelling W.M., Weidmann R.T., Smith T.P.L.; RT ; RL Submitted (04-MAY-2007) to the EMBL/GenBank/DDBJ databases. RL USDA-ARS U.S. Meat Animal Research Center, P.O. Box 166, Spur 18D, Clay RL Center, NE 68933, USA XX DR Ensembl-Gn; ENSBTAG00000012794; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000016999; Bos_taurus. XX CC Contact: Gregory P. Harhay at gregory.harhay@ars.usda.gov. XX FH Key Location/Qualifiers FH FT source 1..1983 FT /organism="Bos taurus" FT /lab_host="Escherichia coli DH10B" FT /mol_type="mRNA" FT /clone_lib="5BOV" FT /clone="5BOV99D3; plate 99 row D column 3" FT /tissue_type="pooled" FT /note="Vector: pCMV SPORT6; Site_1: NotI; Site_2: SalI; FT Library made from pooled mRNA isolated from mammary tissues FT at eight physiological, developmental, and disease states." FT /db_xref="taxon:9913" FT gene 1..1983 FT /gene="PAH" FT /note="putative, similar to GeneID: 5053" FT CDS 70..1425 FT /codon_start=1 FT /gene="PAH" FT /product="phenylalanine hydroxylase" FT /db_xref="GOA:Q2KIH7" FT /db_xref="InterPro:IPR001273" FT /db_xref="InterPro:IPR002912" FT /db_xref="InterPro:IPR005961" FT /db_xref="InterPro:IPR018301" FT /db_xref="InterPro:IPR019773" FT /db_xref="InterPro:IPR019774" FT /db_xref="UniProtKB/Swiss-Prot:Q2KIH7" FT /protein_id="ABQ13025.1" FT /translation="MSALVLESRALGRKLSDFGQETSYIEGNSDQNAVSLIFSLKEEVG FT ALARVLRLFEENDINLTHIESRPSRLRKDEYEFFTNLDQRSVPALANIIKILRHDIGAT FT VHELSRDKKKDTVPWFPRTIQELDNFANQVLSYGAELDADHPGFKDPVYRARRKQFADI FT AYNYRHGQPIPRVEYTEEEKKTWGTVFRTLKSLYKTHACYEHNHIFPLLEKYCGFREDN FT IPQLEEVSQFLQSCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD FT ICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIK FT AYGAGLLSSFGELQYCLSDKPKLLPLELEKTAVQEYTITEFQPLYYVAESFNDAKEKVR FT NFAATIPRPFSVHYDPYTQRIEVLDNTQQLKILADSISSEVEILCSALQKLK" XX SQ Sequence 1983 BP; 572 A; 445 C; 417 G; 549 T; 0 other; ccacgtgttg tttgcgctgt ttgcaaatct ccctgcggct gacggccggt aactgtagag 60 aaggccagta tgtcagctct ggtcctggag agccgagcct tgggcaggaa actcagcgac 120 tttggacagg aaacgagcta tattgaaggc aactctgatc aaaatgctgt atcgctgatc 180 ttctcactca aagaagaagt tggtgcactg gccagagtat tacgtttatt tgaggagaat 240 gatataaacc tgacccacat tgaatcaaga ccttcacgtt taaggaaaga cgagtatgaa 300 tttttcacca atctggatca acgcagcgtg cctgccctgg caaacatcat caagatcttg 360 agacatgaca ttggtgccac tgtgcacgag ctttcccggg ataagaagaa agacacagtg 420 ccctggtttc caagaaccat tcaggaactc gacaactttg ccaaccaggt tctcagctat 480 ggagctgaac tggatgcaga tcacccggga tttaaagatc ctgtataccg agcaagacgg 540 aagcaattcg ctgacattgc ctacaactat agacatgggc agcccattcc tcgagtggaa 600 tacacggagg aagaaaaaaa aacatggggg acggtattca ggaccctgaa gtccttgtat 660 aagacccatg cttgctatga gcacaaccac attttccccc ttctggaaaa gtattgcggc 720 ttccgtgaag ataacattcc ccagctcgaa gaggtttctc agtttctgca gagttgcact 780 ggtttccgcc tccgaccagt cgctggcctg ctttcttctc gggatttctt gggtggcctg 840 gctttccgag tcttccactg cactcagtac atcagacatg ggtctaagcc catgtataca 900 ccagaaccgg acatatgcca tgagctcttg ggacatgtac ctttgttttc agatcgcagc 960 tttgcccagt tttcgcagga gatcggcctt gcctccctgg gtgcacctga tgagtacatt 1020 gaaaaacttg caacaattta ctggtttact gtggagtttg ggctctgcaa gcaaggagac 1080 tccataaagg catatggtgc tgggctcctg tcatcctttg gtgaattaca gtattgccta 1140 tcagacaagc caaagctcct tcctctggaa ctggagaaga ccgctgtcca ggagtatacg 1200 atcacagagt tccagcctct gtattatgtg gctgagagtt ttaatgatgc caaggagaaa 1260 gtgaggaact ttgctgccac aatcccacgg cccttctcag ttcattatga cccatacact 1320 caacggattg aggtcttgga caacacccag caacttaaga ttttggctga ctccatcagt 1380 agtgaagttg agatcctttg cagtgccctc cagaaattaa agtgaagtca cggacagaac 1440 ctaaactgag aatctctcaa tggaaatcca cctacttctt ttatttcatc ttaaaaagtg 1500 taacaaacaa gtcttgattc aaaatgacag ccttaaatcc tttcgagagc aagttggcgg 1560 gtcaacaaat aaaatcatat gaaatgacag catattaata atacccaaaa gcataatggt 1620 agatcttttg ggatcatctg tgatttagag atgataatct catactctga attgaattaa 1680 aaatcaataa cctgtcacat ttcatcaaag ttaatgaaaa tttgggacct gttttattca 1740 accttcctaa atactttcat ttgctgtaga gaattcctaa aggggtatat ccctcactgt 1800 gaaacacaag cctatcagaa ttgaatttct ggatttaata taaattttaa cctacaaaag 1860 tctttttctg tttcagggaa ctatgattct acttactgct ttgttatttt gcctatgtag 1920 attttcttta attcagaagc ctattaaaat caatacaaat attaaaattc ataatgtaat 1980 atc 1983 // |
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