spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT021191; SV 1; linear; mRNA; STD; MAM; 857 BP.
XX
AC   BT021191;
XX
DT   11-MAR-2005 (Rel. 83, Created)
DT   27-NOV-2008 (Rel. 97, Last updated, Version 4)
XX
DE   Bos taurus Bcl-2 inhibitor of transcription (Bit1), mRNA, complete cds.
XX
KW   FLI_CDNA.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RP   1-857
RX   DOI; 10.1007/s00335-001-2145-4
RX   PUBMED; 12140684.
RA   Sonstegard T.S., Capuco A.V., White J., Van Tassell C.P., Connor E.E.,
RA   Cho J., Sultana R., Shade L., Wray J.E., Wells K.D., Quackenbush J.;
RT   "Analysis of bovine mammary gland EST and functional annotation of the Bos
RT   taurus gene index";
RL   Mamm. Genome 13(7):373-379(2002).
XX
RN   [2]
RP   1-857
RX   DOI; 10.1186/1471-2164-6-166
RX   PUBMED; 16305752.
RA   Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L.,
RA   Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.;
RT   "Characterization of 954 bovine full-CDS cDNA sequences";
RL   BMC Genomics 6:166-166(2005).
XX
RN   [3]
RP   1-857
RA   Harhay G.P., Sonstegard T.S., Van Tassell C.P., Clawson M.L., Heaton M.P.,
RA   Keele J.W., Snelling W.M., Weidmann R.T., Smith T.P.L.;
RT   ;
RL   Submitted (09-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Genetic Research Unit, USDA-ARS U.S. Meat Animal Research Center,
RL   P.O. Box 166, Spur 18D, Clay Center, NE 68933, USA
XX
DR   Ensembl-Gn; ENSBTAG00000016710; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000022212; Bos_taurus.
XX
CC   Contact: Gregory P. Harhay at harhay@email.marc.usda.gov.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..857
FT                   /organism="Bos taurus"
FT                   /lab_host="Escherichia coli DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="5BOV"
FT                   /clone="5BOV44K18; plate 44 row K column 18"
FT                   /tissue_type="pooled"
FT                   /note="Vector: pCMV SPORT6; Site_1: NotI; Site_2: SalI;
FT                   Library made from pooled mRNA isolated from mammary tissues
FT                   at eight physiological, developmental, and disease states."
FT                   /db_xref="taxon:9913"
FT   gene            1..857
FT                   /gene="Bit1"
FT                   /note="putative, similar to GeneID: 51651"
FT   CDS             233..772
FT                   /codon_start=1
FT                   /gene="Bit1"
FT                   /product="Bcl-2 inhibitor of transcription"
FT                   /db_xref="GOA:Q3ZBL5"
FT                   /db_xref="InterPro:IPR002833"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3ZBL5"
FT                   /protein_id="AAX31373.1"
FT                   /translation="MISRSLVMEYLTNPGALSLVAGVACGVCLGWGLRMRFGMLPKSSV
FT                   RETNPDTETEASILGESGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEL
FT                   LKEWEYCGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGP
FT                   GPADLIDKVTGHLKLY"
XX
SQ   Sequence 857 BP; 211 A; 187 C; 250 G; 209 T; 0 other;
     ttcccctctc ctttgggcca cctcagcggg tcgtcgcggg atttcagttc gggtctgggt        60
     tagggacctg tgggcggagc cagaggaaga atgactgttc tcgttgccgt tcttgatccg       120
     gaacttgttg tcgagatacc ccggaagagg taactcgcgt gagagcggcg tgttcggtac       180
     ccagaattga agaacgcgaa ggcgccagtg aggcggagga gaggtgcgct agatgatctc       240
     cagatccctg gttatggagt atctgactaa tcctggtgca cttagcttgg ttgccggagt       300
     tgcctgtggc gtgtgcctgg gctggggcct ccgaatgcgc tttgggatgc tccccaagag       360
     ctcagtgagg gagacaaatc ctgacactga aacggaagca agtatcctcg gagagagtgg       420
     ggagtacaaa atgattcttg tggttcgaaa tgacttaaag atggggaagg ggaaggtggc       480
     tgcccagtgc tctcatgctg ctgtttctgc ctacaagcaa attcaaagga gaaaccctga       540
     gttactcaaa gagtgggaat actgtggcca gcccaaagtg gtggtcaaag ctcctgatga       600
     agaaactctg gttgaattat tgacccatgc aaaagtgctg ggactgactg taagtttaat       660
     tcaagatgca ggacgtactc agattgcacc aggctctcga actgttttag gaattggacc       720
     aggaccagca gacctaattg acaaggtcac cggtcaccta aaactttact aggtggaatt       780
     ttgtatgatg atggtggttc caccacacgt gtttgaaact gtcaaattct aacaataaaa       840
     gctgaatttc ttccccc                                                      857
//
spacer
spacer