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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT020960; SV 1; linear; mRNA; STD; MAM; 1177 BP.
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AC   BT020960;
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DT   17-FEB-2005 (Rel. 82, Created)
DT   27-NOV-2008 (Rel. 97, Last updated, Version 4)
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DE   Bos taurus glutathione S-transferase A4 (GSTA4), mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
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RN   [1]
RP   1-1177
RX   DOI; 10.1007/s00335-001-2145-4
RX   PUBMED; 12140684.
RA   Sonstegard T.S., Capuco A.V., White J., Van Tassell C.P., Connor E.E.,
RA   Cho J., Sultana R., Shade L., Wray J.E., Wells K.D., Quackenbush J.;
RT   "Analysis of bovine mammary gland EST and functional annotation of the Bos
RT   taurus gene index";
RL   Mamm. Genome 13(7):373-379(2002).
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RN   [2]
RP   1-1177
RX   DOI; 10.1186/1471-2164-6-166
RX   PUBMED; 16305752.
RA   Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L.,
RA   Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.;
RT   "Characterization of 954 bovine full-CDS cDNA sequences";
RL   BMC Genomics 6:166-166(2005).
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RN   [3]
RP   1-1177
RA   Harhay G.P., Sonstegard T.S., Clawson M.L., Heaton M.P., Keele J.W.,
RA   Snelling W.M., Weidmann R.T., Smith T.P.L.;
RT   ;
RL   Submitted (16-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Genetic Research Unit, USDA-ARS U.S. Meat Animal Research Center,
RL   P.O. Box 166, Spur 18D, Clay Center, NE 68933, USA
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DR   Ensembl-Gn; ENSBTAG00000004288; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000028640; Bos_taurus.
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CC   Contact: Gregory P. Harhay at harhay@email.marc.usda.gov.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1177
FT                   /organism="Bos taurus"
FT                   /lab_host="Escherichia coli DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="5BOV"
FT                   /clone="5BOV101E7; plate 101 row E column 7"
FT                   /tissue_type="pooled"
FT                   /note="Vector: pCMV SPORT6; Site_1: NotI; Site_2: SalI;
FT                   Library made from pooled mRNA isolated from mammary tissues
FT                   at eight physiological, developmental, and disease states."
FT                   /db_xref="taxon:9913"
FT   gene            1..1177
FT                   /gene="GSTA4"
FT                   /note="putative, similar to GeneID: 2941"
FT   CDS             34..702
FT                   /codon_start=1
FT                   /gene="GSTA4"
FT                   /product="glutathione S-transferase A4"
FT                   /db_xref="GOA:Q5E9G0"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5E9G0"
FT                   /protein_id="AAX08977.1"
FT                   /translation="MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQ
FT                   DGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLE
FT                   LLIMHPFLKPDDQQKEVANMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQT
FT                   ILALEEKIPNILSAFPHLQEYTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIFMP
FT                   "
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SQ   Sequence 1177 BP; 312 A; 271 C; 265 G; 329 T; 0 other;
     tccgagtgga gccagaaaac ctgaaaggcc gtgatggcca cgaaacccaa gctccactat        60
     cccaacggac gaggccggat ggaatctgtg cgatgggtgt tagctgctgc cggagtcgag       120
     tttgacgaag aatttttaga aacaaaagaa cagttgcaga agttgcagga tggtaaccac       180
     ctgctgtttc agcaagtgcc aatggttgaa atcgacggga tgaagctggt gcagacccgg       240
     agcatcctcc actacatcgc agacaagcac catctcttcg gcaaagacct caaggagaga       300
     accctgattg acatgtatgt ggaggggacc ctggatcttc tggaactgct tatcatgcat       360
     cctttcctca aaccagacga tcagcaaaag gaagtggcta atatggccca gaaggctata       420
     attagatact ttcctgtgtt cgaaaaggtt ttacggggtc atggacaaag gtttcttgtt       480
     ggtaatcagc tgagtcttgc agacataatt ctactccaga ccattttggc tctagaagag       540
     aaaattccta atatcctgtc tgccttccct cacctccagg agtacacagt gaaaatcagt       600
     aatatcccta caattaagaa attccttgaa cctggcagca agaagaagcc tccccccgat       660
     gacatctacg tgagaaccgt gtacaacatc ttcatgccat aggacagcag tacagctgtg       720
     actgagcact gcccccagag attgatgtgt ccacagtagt gtcttaattg aagccaggct       780
     gccgtgatcc agctctgtcg tggtgctgtg tatattgttc ctaagttggt ctttcatgtc       840
     ctaatatctc tttgagaaac atcgacctgt ttttttggtc cagtgagtga ttgttacagg       900
     acctcttctg aaatattttt ggagagatca gcctttaagt tagatctgct ctgtctgttc       960
     atttcctggt acagggatgg gtaggacctt gtatcgtctg tcccctgagc ttttgtcctc      1020
     tccttatccc attctaaact ccctccagtc tcttcctgtt tttagtgtct aataacaatg      1080
     gagtttttac tagatagtaa ctctcctctg agctataata gatccgtggt agtgatgaat      1140
     gcctttgata ttcactaaaa taaaggattt acaaatc                               1177
//
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