 |
|
EBI DbfetchID BT016093; SV 1; linear; mRNA; STD; INV; 2176 BP. XX AC BT016093; XX DT 28-OCT-2004 (Rel. 81, Created) DT 28-OCT-2004 (Rel. 81, Last updated, Version 1) XX DE Drosophila melanogaster LD36620 full insert cDNA. XX KW FLI_CDNA. XX OS Drosophila melanogaster (fruit fly) OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; OC Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; OC Drosophilidae; Drosophila; Sophophora. XX RN [1] RP 1-2176 RA Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., RA Park S., Wan K., Yu C., Rubin G.M., Celniker S.; RT ; RL Submitted (27-OCT-2004) to the EMBL/GenBank/DDBJ databases. RL Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, RL One Cyclotron Road, Berkeley, CA 94720, USA XX CC Sequence submitted by: CC Berkeley Drosophila Genome Project CC Lawrence Berkeley National Laboratory CC Berkeley, CA 94720 CC This clone was sequenced as part of a high-throughput process to CC sequence clones from Drosophila Gene Collection (Rubin et al., CC Science 2000, Stapleton et al., Genome Biology 2002). The sequence CC has been subjected to integrity checks for sequence accuracy, CC presence of a polyA tail and contiguity within 100 kb in the CC genome. Thus we believe the sequence to reflect accurately this CC particular cDNA clone. However, there are artifacts associated with CC the generation of cDNA clones that may have not been detected in CC our initial analyses such as internal priming, priming from CC contaminating genomic DNA, retained introns due to reverse CC transcription of unspliced precursor RNAs, and reverse CC transcriptase errors that result in single base changes. For CC further information about this sequence, including its location and CC relationship to other sequences, please visit our Web site CC (http://fruitfly.berkeley.edu) or send email to cdna@fruitfly.org. XX FH Key Location/Qualifiers FH FT source 1..2176 FT /organism="Drosophila melanogaster" FT /map="76C1-76C2" FT /strain="y; cn bw sp" FT /mol_type="mRNA" FT /db_xref="taxon:7227" FT gene 1..2176 FT /gene="CG8756" FT /note="blastp alignment with CG8756-RD" FT CDS 104..1681 FT /codon_start=1 FT /gene="CG8756" FT /product="LD36620p" FT /note="Longest ORF" FT /db_xref="FLYBASE:FBgn0036901" FT /db_xref="GOA:Q8IQU1" FT /db_xref="InterPro:IPR002557" FT /db_xref="UniProtKB/TrEMBL:Q8IQU1" FT /protein_id="AAV36978.1" FT /translation="MARWWPILSVVCLCLAVAHGQDKLEGVDVEEVCADRPADEYFRLE FT TDGDCREVYRCTKSGLKEIQCPSGLAFDVIKQTCDWKAKVTNCDEKEKPRKAKPILKTD FT EPICPEGKLSCGDGECLDKELFCNGKSDCKDESDENACSVDEDPNRAPECDPTQCALPD FT CFCSADGTRIPGGIEPQQVPQMITITFNGAVNVDNIDLYEDIFNGQRQNPNGCSIKGTF FT FVSHKYTNYSAVQDLHRRGHEISVFSLTHKDDPNYWTGGSYDDWLAEMAGSRLIVERFA FT NITDGSIIGMRAPYLRVGGNKQFEMMADQFFVYDASITASLGRVPIWPYTLYFRMPHKC FT NGNAHNCPSRSHPVWEMVMNELDRRDDPTFDESLPGCHMVDSCSNVASGDQFARLLRHN FT FNRHYNSNRAPLGLHFHASWLKSKKEYRDELIKFIEEMLGRNDVFFVTNLQVIQWMQNP FT TELNSLRDFQEWKEKCDVKGQPYCSLPNACPLTTRELPGETLRLFTCMECPNNYPWILD FT PTGDGFSV" XX SQ Sequence 2176 BP; 521 A; 656 C; 529 G; 470 T; 0 other; aagcgtggct gtgtattgga agagtgagct ccgttcactc cacttccatt cgatccaagc 60 attcccactc agagtctggg caaaaagagc tctggaatct atcatggcgc gttggtggcc 120 aattttgagc gttgtgtgcc tctgccttgc tgttgcacat ggccaggaca agctggaggg 180 cgttgatgtg gaggaggtgt gcgccgatcg tcccgcggat gagtacttcc gcctggagac 240 cgacggcgac tgccgcgagg tgtacagatg taccaagtcg ggtttgaaag aaattcagtg 300 tccttcgggt ctggccttcg acgtgatcaa gcagacctgc gactggaagg ccaaggtgac 360 caattgcgac gagaaagaga agccgcgcaa ggccaagccc atcctgaaga cggatgagcc 420 catctgtccc gagggtaagc tgtcctgcgg cgacggcgag tgcctggaca aggagctctt 480 ctgcaacggc aagtccgact gcaaggacga atccgatgag aacgcctgct ctgtcgatga 540 ggatcccaac cgcgcccccg aatgcgatcc gacgcagtgc gccctgcccg actgcttctg 600 ctcggcggac ggaacccgca ttcccggcgg cattgagccc caacaggtgc cccagatgat 660 cacgatcacc ttcaacggcg ccgtcaacgt ggacaacatc gacctgtacg aggacatctt 720 caacggacag cgccagaatc ccaacggctg ctccatcaag ggcaccttct tcgtgtccca 780 caagtacacc aactactcgg cggtgcagga ccttcatcgt cgcggacacg agatctccgt 840 gttctcgcta acgcacaagg atgaccccaa ctactggacc ggcggcagct acgacgactg 900 gctggccgag atggccggct cccgactgat cgtggagcgc ttcgccaaca tcaccgacgg 960 ctccatcatc ggcatgcggg cgccctacct ccgcgtgggc ggcaacaagc agttcgagat 1020 gatggccgat cagttcttcg tgtacgacgc ctccatcacc gcctcccttg gccgcgtgcc 1080 catttggcca tacaccctgt acttccgcat gccgcacaag tgcaacggca acgcgcacaa 1140 ctgcccatcg aggagccacc ccgtgtggga gatggtcatg aacgagctgg accggcgcga 1200 cgatcccacc ttcgacgagt ccctgcccgg ttgccatatg gtggactcct gctcaaacgt 1260 agccagcggc gaccagttcg cacgcctgct gcgccacaac ttcaaccgcc actacaatag 1320 caaccgtgct ccacttggac tccacttcca cgcttcgtgg ctgaagtcga agaaggagta 1380 ccgcgacgag ctgatcaaat tcatcgagga gatgctcggc cgcaacgacg tgttcttcgt 1440 gaccaacctg caggtgatcc agtggatgca gaaccccacc gagctgaact cgctgcgcga 1500 cttccaggag tggaaggaga agtgcgacgt caagggccag ccctactgct ctctgcccaa 1560 cgcgtgtccc ctgaccacca gggagctgcc cggcgagacg ctgcgtctct tcacgtgcat 1620 ggagtgcccc aacaactacc cctggatcct ggatcccacc ggcgatggct tctccgttta 1680 aggccgtccc gtcgtcgcta tccttccatc tacccaaaca ggagaacaac tcacagtagt 1740 tccaccgaga gtctgataaa ctaaacaaac tgtaccagct gatctatgct gatccatcta 1800 cagaatactc aaatcgttgc atcctgcttc ctgtgtgatc ctaagctatc tctatccatc 1860 tgttatttat gcgactttca tttctatctc tctctctctc tctctctctc tttctatcta 1920 tcttctatct atctgtatac tttcgactat tctgtatctg aacctgtatc tttatctctc 1980 tgttgatttc aaaagtgatt tgttttaatt tacctagctg cctctttgac cagctcaaag 2040 acaatttcca caaacaaaca aaaccaagcg ccaaaaatcg cagcagcaaa aatatcttcg 2100 taattgtata agtatttttt ataagaaaaa tataaaaaat atataaaaaa aattaaaaaa 2160 aaaaaaaaaa aaaaaa 2176 // |
|