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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT011457; SV 1; linear; mRNA; STD; INV; 1365 BP.
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AC   BT011457;
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DT   23-JAN-2004 (Rel. 78, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 2)
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DE   Drosophila melanogaster RE31995 full insert cDNA.
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KW   FLI_CDNA.
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OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
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RN   [1]
RP   1-1365
RA   Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J.,
RA   Park S., Wan K., Yu C., Rubin G.M., Celniker S.;
RT   ;
RL   Submitted (22-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, Berkeley, CA 94720, USA
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DR   FLYBASE; FBgn0039625; beta4GalNAcTB.
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CC   Sequence submitted by:
CC   Berkeley Drosophila Genome Project
CC    Lawrence Berkeley National Laboratory
CC   Berkeley, CA 94720
CC    This clone was sequenced as part of a high-throughput process to
CC   sequence clones from Drosophila Gene Collection (Rubin et al.,
CC   Science 2000, Stapleton et al., Genome Biology 2002). The sequence
CC   has been subjected to integrity checks for sequence accuracy,
CC   presence of a polyA tail and contiguity within 100 kb in the
CC   genome. Thus we believe the sequence to reflect accurately this
CC   particular cDNA clone. However, there are artifacts associated with
CC   the generation of cDNA clones that may have not been detected in
CC   our initial analyses such as internal priming, priming from
CC   contaminating genomic DNA, retained introns due to reverse
CC   transcription of unspliced precursor RNAs, and reverse
CC   transcriptase errors that result in single base changes. For
CC   further information about this sequence, including its location and
CC   relationship to other sequences, please visit our Web site
CC   (http://fruitfly.berkeley.edu) or send email to cdna@fruitfly.org.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1365
FT                   /organism="Drosophila melanogaster"
FT                   /map="98F5-98F5"
FT                   /strain="y; cn bw sp"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7227"
FT   gene            1..1365
FT                   /gene="CG14517"
FT                   /note="blastp alignment with CG14517-RA"
FT   misc_feature    1..1298
FT                   /note="sim4 alignment with AE003768:1-1298"
FT   CDS             90..1061
FT                   /codon_start=1
FT                   /gene="CG14517"
FT                   /product="RE31995p"
FT                   /note="Longest ORF"
FT                   /db_xref="GOA:Q9VAQ8"
FT                   /db_xref="HSSP:1PZT"
FT                   /db_xref="InterPro:IPR003859"
FT                   /db_xref="UniProtKB/TrEMBL:Q9VAQ8"
FT                   /protein_id="AAR99115.1"
FT                   /translation="MFVRLWVRSFHKYDLLIAIGLITLIVYLCLPFRFASHYDYIEESK
FT                   IEGALVPQVTRNVSQQEVFECTYSEIIAENRFVYHLAHYHDAVQRGAEIRPGGEFRPEG
FT                   CQARYSTAIIVPYRQREEQLHAFLTYMHNYLPQQLIHYRIFLVEQFDHKPFNRAMLFNI
FT                   GAQVAAEYGFPCLILHDVDLLPLNSGQIYACSERPRHMSSALDHWRFRLPYRGLFGGVV
FT                   AINTAQYQQINGMSNLYYGWGGEDDDLYERLQALNIDICRFAMEFSKYTMLKHKQEQPN
FT                   ANRVALLRSATLRQHADGLNSLVYTEMERRMHSLFTHILVDT"
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SQ   Sequence 1365 BP; 326 A; 369 C; 349 G; 321 T; 0 other;
     gttgttcgcc aaccggccgc gaagattgcg tccgaaatta ggatgcggag tttccaaaga        60
     tcgcactgag tcaacttttc ctgccaacaa tgttcgtgcg gctctgggtc cgcagcttcc       120
     ataaatatga tcttctcatc gccatcggac tgatcactct catcgtgtac ctgtgtctgc       180
     ccttccggtt cgcatcgcac tacgactaca tcgaggaatc aaagatcgag ggggctctgg       240
     tgccgcaggt gaccagaaat gtctcccagc aggaagtttt cgaatgcacc tactcggaga       300
     tcattgccga aaaccggttc gtctaccacc tggcccatta ccatgacgcg gtgcagaggg       360
     gcgcggagat ccgtcctggc ggcgagttcc gtccggaagg atgtcaggct cgctacagca       420
     ccgccatcat tgtgccgtac aggcagcggg aggagcagct gcacgccttc ctcacgtaca       480
     tgcacaatta cctgccgcag cagctgatcc actatcggat tttcctggtc gaacagttcg       540
     atcataagcc gtttaacagg gcgatgctct tcaacattgg cgcccaggtg gctgcggagt       600
     atggatttcc ctgcctcatc cttcatgacg tggacctcct gccactgaat tcgggtcaaa       660
     tatatgcctg ctccgaacgt ccacggcaca tgagctctgc cctggatcac tggcgattcc       720
     gactgcctta ccgcggtctt ttcggcggcg tggtggccat caacaccgcc cagtaccagc       780
     agatcaacgg catgtccaat ctgtattacg gctggggcgg agaggacgat gacctctacg       840
     agcgcctgca ggccctgaat atcgacattt gccgattcgc aatggagttc agtaagtaca       900
     ccatgctgaa gcacaaacag gagcagccga atgccaatcg cgtggcactg ctgagatcgg       960
     cgactctgcg ccagcacgcg gatggactca actcactggt gtacacggaa atggagcggc      1020
     gaatgcacag tttgttcacg cacatcctgg ttgatacctg agtgccagta tttgttattg      1080
     tatttagctt gtaggccaat cgttttcgta gtcggtatct cgaagtgttt tatacttggc      1140
     tgcacttcgc ttcgcaaccg attagttacc gccttagaca atgcgttccg aatcgatcgt      1200
     gatatctcac tcactaggct aagaagctag acgggaatgg aggagtcaaa gctgtaattg      1260
     aagtacaatg cagaagcctc agattaagcg gatatcgaca tgttaagcac gctctgcctc      1320
     tgccaataaa aatgtattga atttaatcga aaaaaaaaaa aaaaa                      1365
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