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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT010395; SV 1; linear; mRNA; STD; PLN; 1713 BP.
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AC   BT010395;
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DT   24-AUG-2003 (Rel. 77, Created)
DT   24-AUG-2003 (Rel. 77, Last updated, Version 1)
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DE   Arabidopsis thaliana At1g16900 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1713
RA   Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Dale J.M.,
RA   Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G.,
RA   Kawai J., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S.,
RA   Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A.,
RA   Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1713
RA   Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Dale J.M.,
RA   Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G.,
RA   Kawai J., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S.,
RA   Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A.,
RA   Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (22-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Kim,C.J.,
CC   Chen,H., Cheuk,R., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M.,
CC   Dale,J.M., Jones,T., Karlin-Neumann,G., Lam,B., Lee,J.M., Lin,J.,
CC   Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J., Quach,H.L.,
CC   Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C., Yamada,K.,
CC   Yu,G., Davis,R.W.,  Theologis,A., and Ecker,J.R.
CC   Kim,C.J. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1713
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="U24181"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1713
FT                   /codon_start=1
FT                   /product="At1g16900"
FT                   /note="'Ser/Thr protein kinase, putative'"
FT                   /db_xref="GOA:Q9FZ49"
FT                   /db_xref="InterPro:IPR005599"
FT                   /db_xref="UniProtKB/TrEMBL:Q9FZ49"
FT                   /protein_id="AAQ56838.1"
FT                   /translation="MDLTTTRQRRPLISDSSSSSSTKSYSKTDKPGRSNGGDAEDGGLR
FT                   WFLPFIALCYLRYMSATSNIIHDCDEVFNYWEPLHYILYKSGFQTWEYSSNFALRSYLY
FT                   ILFHELAGRPASWWFGDDKVRVFYAVRLFLGLVSAVSDTVLVVALSRKYGKRIATYAVA
FT                   MLCLTSGCFFASTSFLPSSFSMYAISLSSGLLLFEKYAMAVAVSVVGVILGWPFSILAF
FT                   LPVVIYSLVKRFKQAFIAGAVTTIFLLGVSLLVDYYYYKRWTSSVLNLLIYNVLGGGES
FT                   HLYGTEGALFYIRNGFNNFNFCFILAMLFVAIYPVIRRKYDRALLVVISPMYIWLAFMS
FT                   LQPHKEERFLYPIYPLICVSASAVIENIPELFREKYSSRESLLVTITKYMRPVILGCIL
FT                   CASHSRTFALINGYSAPLEVYKLLEHHDDAGPGSVLCVGSEWHRYPSSFFVPHYISEVR
FT                   WIDDGFRGLLPFPFNNTLGGTSASPPYFNNKNQASEEQYLKNIETCTFLIELQLSRPYQ
FT                   YRGSDLSTWEAIAVLPYLDRELSPAKYRSFFIPHMWQEKNVFGKYVALRRVPK"
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SQ   Sequence 1713 BP; 400 A; 376 C; 377 G; 560 T; 0 other;
     atggatctaa cgacgacgcg tcagaggcgt ccacttatat ctgactcttc ttcttcgtct        60
     tctacgaaat cttactcgaa gaccgataaa cctggccgat ctaatggcgg tgatgcggag       120
     gatggtggtc tccgatggtt cttgccgttt atagcgcttt gttatcttcg ttacatgagc       180
     gcgacttcta atatcattca tgactgcgat gaagtgttca attactggga gcctcttcat       240
     tatattctct acaagtccgg atttcagacc tgggaataca gttccaactt tgctcttcgg       300
     tcgtacttat acattctatt ccatgaattg gctggacggc ctgcttcttg gtggtttggt       360
     gatgacaagg ttagagtttt ctatgcagtg agactctttc tcggactggt ttctgcagtt       420
     tcagatactg tcctggttgt tgcgctctcc agaaagtatg ggaaacgtat cgctacctat       480
     gcagttgcga tgctctgctt aaccagtggc tgcttctttg ctagtaccag tttcctcccc       540
     agttcatttt ctatgtacgc cataagcctc tcatctggtt tattactttt cgagaagtat       600
     gccatggctg ttgcagtttc ggttgtcggg gtgattcttg gctggccatt ttctatcttg       660
     gcctttttac ctgtcgttat ttactctctg gttaagagat tcaagcaagc atttatcgct       720
     ggtgcagtca ccactatatt tctccttgga gtctcactac ttgtggatta ctattattac       780
     aagagatgga catcatcagt tttgaatctc ttgatataca atgtgttagg gggtggagag       840
     agccatctct atgggactga aggagcgtta ttttatataa gaaatggatt taacaacttc       900
     aacttctgtt tcattttggc aatgttgttt gtcgcaatat atcctgttat cagaaggaag       960
     tatgaccgtg ccctgctggt tgtgatttcc ccgatgtata tttggctggc gttcatgtca      1020
     cttcagcccc acaaagaaga aaggttcctt tatcctatat accctcttat ttgtgtctct      1080
     gcttctgctg ttattgagaa catccctgag ctgttccggg aaaagtatag ctcacgtgaa      1140
     agtcttctgg tgacaataac caaatacatg cgacctgtga ttcttggttg tatcttatgt      1200
     gcttcacatt ctcgcacatt tgctcttatt aatggctatt ccgctccctt ggaggtctac      1260
     aaactactgg agcatcatga tgatgcagga ccaggttctg ttctatgtgt gggaagtgaa      1320
     tggcatcgat acccatcatc gttttttgtg ccccactaca ttagcgaagt acggtggatc      1380
     gatgatggat tccgcggtct tcttccattc ccatttaaca atacacttgg aggcacttca      1440
     gcatcacctc catacttcaa caacaagaac caagcatccg aagaacaata tttaaagaac      1500
     atcgaaactt gtacattcct cattgagttg cagcttagca gaccgtatca gtatcgaggc      1560
     agcgacttat ctacatggga ggctattgcg gtgttgcctt atttggacag agagctgtcg      1620
     ccagctaagt atagatcgtt cttcatcccg cacatgtggc aggagaaaaa tgtgtttggc      1680
     aaatacgtag cactgagaag agtcccaaaa tga                                   1713
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