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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT008303; SV 1; linear; mRNA; STD; PLN; 1317 BP.
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AC   BT008303;
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DT   16-MAY-2003 (Rel. 75, Created)
DT   16-MAY-2003 (Rel. 75, Last updated, Version 1)
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DE   Arabidopsis thaliana At2g47760/F17A22.15 gene, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1317
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Dale J.M.,
RA   Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A.,
RA   Karlin-Neumann G., Kawai J., Lam B., Lin J., Miranda M., Narusaka M.,
RA   Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G.,
RA   Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1317
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Dale J.M.,
RA   Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A.,
RA   Karlin-Neumann G., Kawai J., Lam B., Lin J., Miranda M., Narusaka M.,
RA   Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G.,
RA   Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (15-MAY-2003) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R.,
CC   Chen,H., Kim,C.J., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M.,
CC   Dale,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC   Yamada,K., Yu,G., Yuan,S., Davis,R.W.,  Theologis,A., and
CC   Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1317
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="2"
FT                   /mol_type="mRNA"
FT                   /clone="U14893"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1317
FT                   /codon_start=1
FT                   /product="At2g47760/F17A22.15"
FT                   /note="Not56-like protein"
FT                   /db_xref="GOA:Q944H6"
FT                   /db_xref="InterPro:IPR007873"
FT                   /db_xref="UniProtKB/TrEMBL:Q944H6"
FT                   /protein_id="AAP37662.1"
FT                   /translation="MAGASSPASLRASRSRRLGKETNRSDLFKKPAVPFAFALILADAI
FT                   LVALIIAYVPYTKIDWDAYMSQVSGFLGGERDYGNLKGDTGPLVYPAGFLYVYSAVQNL
FT                   TGGEVYPAQILFGVLYIVNLGIVLIIYVKTDVVPWWALSLLCLSKRIHSIFVLRLFNDC
FT                   FAMTLLHASMALFLYRKWHLGMLVFSGAVSVKMNVLLYAPTLLLLLLKAMNIIGVVSAL
FT                   AGAALAQILVGLPFLITYPVSYIANAFDLGRVFIHFWSVNFKFVPERVFVSKEFAVCLL
FT                   IAHLFLLVAFANYKWCKHEGGIIGFMRSRHFFLTLPSSLSFSDVSASRIITKEHVVTAM
FT                   FVGNFIGIVFARSLHYQFYSWYFYSLPYLLWRTPFPTWLRLIMFLGIELCWNVYPSTPS
FT                   SSGLLLCLHLIILVGLWLAPSVDPYQLKEHPKSQIHKKA"
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SQ   Sequence 1317 BP; 286 A; 299 C; 290 G; 442 T; 0 other;
     atggcgggcg cctcatcacc ggcgagtttg agagcttctc gtagccgtcg gctggggaag        60
     gagacgaatc gatccgatct attcaaaaaa cctgcagttc cattcgcatt cgcgctaatt       120
     cttgctgatg caatcctagt cgcacttatt atcgcctatg ttccatacac gaagatcgat       180
     tgggatgctt acatgtcaca ggttagtggg tttctcgggg gagagagaga ctatgggaac       240
     ttgaaaggcg atacagggcc attggtttat ccagcaggtt tcctctatgt ttactctgca       300
     gtgcagaact taactggagg ggaagtctac cctgctcaga ttctttttgg tgttctctac       360
     attgtcaatc tggggatcgt cttgatcatc tacgtgaaga ctgatgtggt gccatggtgg       420
     gcattaagtc tactatgttt atccaagagg atacattcaa tctttgttct ccgtctcttt       480
     aatgattgtt ttgccatgac tctcctacat gcatcaatgg ctctctttct ctatcgtaaa       540
     tggcatctag ggatgcttgt tttcagtgga gctgtttctg taaagatgaa tgtacttttg       600
     tatgctccaa ctttgttact tctgctactt aaggccatga atatcattgg agtggtgtct       660
     gctttggctg gtgcagctct tgctcagata ctcgtgggac tgccgtttct gataacatat       720
     ccggtttcat acatagcaaa cgcctttgat cttggacgtg ttttcattca tttctggtct       780
     gttaacttca aatttgttcc agaacgagtt tttgtgtcca aagaatttgc agtatgcttg       840
     ctcattgctc acctttttct ccttgtggcg ttcgcaaatt ataagtggtg caagcatgaa       900
     ggcgggatta taggcttcat gcgttctagg catttcttct tgacacttcc gtcttcactc       960
     tcgttcagtg atgtatcagc ctcacggatt attacgaaag aacatgtcgt cacggccatg      1020
     tttgttggga atttcatcgg cattgtattt gctcgctctc tgcactacca gttctactca      1080
     tggtacttct attcgctacc ttatctacta tggagaacac cgtttcccac ttggctgcgc      1140
     ttgatcatgt tcctcggcat tgagctctgt tggaatgttt atccatcaac accgtcctcc      1200
     tcgggtttgc tattgtgtct acacttgatc attctggtgg gtctctggtt agctccttca      1260
     gtcgatcctt atcagctcaa agaacaccct aaatcccaaa tacacaaaaa agcataa         1317
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