EBI Dbfetch

ID   BT006494; SV 1; linear; mRNA; STD; PLN; 2370 BP.
XX
AC   BT006494;
XX
DT   26-APR-2003 (Rel. 75, Created)
DT   26-APR-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Arabidopsis thaliana At1g24320 gene, complete cds.
XX
KW   FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-2370
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Dale J.M.,
RA   Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A.,
RA   Karlin-Neumann G., Kawai J., Lam B., Lin J., Miranda M., Narusaka M.,
RA   Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G.,
RA   Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
XX
RN   [2]
RP   1-2370
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Dale J.M.,
RA   Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A.,
RA   Karlin-Neumann G., Kawai J., Lam B., Lin J., Miranda M., Narusaka M.,
RA   Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M.,
RA   Seki M., Southwick A., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G.,
RA   Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (25-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
XX
CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R.,
CC   Chen,H., Kim,C.J., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M.,
CC   Dale,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC   Yamada,K., Yu,G., Yuan,S., Davis,R.W.,  Theologis,A., and
CC   Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2370
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="U22631"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..2370
FT                   /codon_start=1
FT                   /product="At1g24320"
FT                   /note="glycosyl hydrolase family 63"
FT                   /db_xref="GOA:Q84M89"
FT                   /db_xref="InterPro:IPR004888"
FT                   /db_xref="UniProtKB/TrEMBL:Q84M89"
FT                   /protein_id="AAP21302.1"
FT                   /translation="MTGLSPSGDIKPLLDDESQRPRVITPFPSPKLTDLSMFQGEHKES
FT                   LYWGTYRPQMYFGVRARTPKSLVAGLMWLVMKDGKPVMRHFCENSNDLKSFGWKEHNGR
FT                   DFGRQELFEQNMVLETSFVKSEEGSLGYGGDWSIRINVQNMLNDDEVKRSTHLFFYLAD
FT                   EGCNGVNLGKDVLRLKESSVLASGSRQDVGNWQMHLKSQNHLETHYCGFKTPDIVNLSG
FT                   LVQQNLTAQEEKSGLLQLSDSSEDSSNIYVFQISTTNQSTIDIAFVSGIKEETSNMENR
FT                   IMSLTGLPLSSLLEEKHIAFNAKFNECFNLSDKLDPETLVVGKAAIGNMLGGIGYFYGQ
FT                   SKIHFPKSPLAKSEDDFLLYWPAELYTAVPSRPRFPRGFLWDEGFHQLLIWRWDVHITL
FT                   EIVGNWLDLMNIDGWIPREQVLGAEALSKIPKQYVVQFPSNGNPPTLLLVIRDLINGIR
FT                   TEKFNEADRDKILSFLDRAFVRLDAWFKWFNTSQIGKEKGSYYWHGRDNITNRELNPQS
FT                   LSSGLDDYPRASHPNEDERHVDLRCWMYLAADSMNSIQEFMGKNDILVTEDYSSIAKLL
FT                   SDFTLLNQMHYDKDHGAYLDFGNHTEEVRLVWKEVIHEDGHLSRELVRETYGKPELRLV
FT                   PHIGYVSFFPFMFRIIPADSSILDKQLDLISNGNIVWSDYGLLSLAKTSSLYMKYNSEH
FT                   QAPYWRGAIWMNMNYMILSSLHHYSTVDGPYNSKARTIYEELRSNLIRNVVRNYDQTGI
FT                   IWEHYDQTKGTGEGARVFTGWSALILLIMSEEYPLF"
XX
SQ   Sequence 2370 BP; 700 A; 458 C; 530 G; 682 T; 0 other;
     atgaccggat taagcccatc tggtgatatc aaaccacttt tggatgatga atcccagaga        60
     cctcgtgtta tcactccttt tccttctcct aaactcaccg acttgtccat gtttcaaggt       120
     gagcacaagg aaagcttgta ttggggaact tatcgtcctc agatgtattt tggagttcga       180
     gccagaactc ccaagtccct tgttgctggc ttgatgtggc tcgttatgaa agatggaaag       240
     cctgttatga gacatttctg tgaaaactct aacgatctta agtcatttgg ttggaaagaa       300
     cacaatggaa gagattttgg gcgacaagag ctgtttgaac aaaatatggt tttggagaca       360
     agttttgtca agtctgagga aggcagcctt ggttatggag gagattggtc tattagaatc       420
     aatgttcaaa atatgttgaa tgatgatgaa gtaaagagaa gtacacatct cttcttctat       480
     ctagctgatg aaggttgcaa tggtgtgaat ttaggcaaag atgtgttaag gcttaaagag       540
     agttctgtct tagcttcagg ttcacgtcaa gatgtaggaa actggcagat gcacttaaaa       600
     tcacagaatc atcttgaaac acattattgt ggattcaaga cgcctgacat tgtcaatctc       660
     tctggtcttg ttcagcaaaa tctcactgct caggaagaga agtctggact acttcagctc       720
     tctgactcat cagaggactc ttccaacatt tatgtttttc agatttccac gacgaaccaa       780
     tcaactatag acattgcctt tgtctctgga ataaaagaag aaacgtccaa catggaaaat       840
     cgtataatga gtcttacagg tttgccactc tctagtctac ttgaagagaa acatatagca       900
     tttaatgcta agttcaatga atgcttcaac ctttctgaca agcttgatcc tgaaactttg       960
     gtggttggta aagcagcaat cgggaacatg cttggaggca ttggttactt ctatggtcaa      1020
     tcaaagattc attttcctaa aagtcctctg gctaaaagtg aggatgattt cttgctatat      1080
     tggccagctg agctatacac agcagttcca agccggcccc ggtttcctag gggatttttg      1140
     tgggatgaag gcttccatca attgttgatc tggcgttggg atgtccatat aaccttggaa      1200
     atagttggaa actggttaga tttaatgaat atagatggat ggattccacg tgagcaagtt      1260
     ttgggagctg aagctctcag taagattcca aagcagtacg ttgttcagtt cccaagtaat      1320
     ggcaatccac ctacactact tttggtcata cgcgatttga tcaatgggat acggacagag      1380
     aaattcaacg aggcagacag agataaaata ttgtcattcc ttgaccgggc ttttgtacgg      1440
     ctagatgcat ggtttaaatg gttcaatact tctcagatag gtaaggaaaa gggaagttat      1500
     tattggcatg gcagagacaa tataacaaat agggaactaa accctcagtc tctttcctcg      1560
     ggtttggatg attatcctcg ggcttcacat ccaaatgaag atgagaggca tgttgacctc      1620
     agatgctgga tgtatcttgc agcagattcc atgaactcca tccaagagtt tatggggaaa      1680
     aatgacatac ttgtgacaga ggattacagc tcaattgcca agctgctttc agatttcact      1740
     cttctgaatc agatgcacta tgacaaggac catggggctt accttgactt tggtaatcat      1800
     acagaagaag ttcggttagt ctggaaagag gtaattcacg aagatggaca tttatctcga      1860
     gagcttgtaa gggagacata tgggaagcca gagctaagat tggttcctca tatcggttac      1920
     gtcagcttct ttcccttcat gtttagaatc atcccagctg attcttcgat cctcgacaaa      1980
     cagctcgatc tcatttcaaa cgggaacatc gtatggagtg actatggact actttcactt      2040
     gccaaaacta gttctttgta catgaagtat aacagtgagc atcaagcacc atactggaga      2100
     ggtgctatat ggatgaacat gaactacatg attctttctt ccctgcacca ttactctaca      2160
     gtggatggac cgtacaacag caaagcacga acgatttacg aggaactaag gagcaatcta      2220
     ataaggaacg tggttagaaa ctatgaccag actggaatta tctgggaaca ctacgatcaa      2280
     acaaaaggaa ctggagaagg tgcacgtgtc ttcaccggtt ggtctgcact tatcctctta      2340
     atcatgtccg aagaataccc tctattttaa                                       2370
//