EBI Dbfetch

ID   BT005854; SV 1; linear; mRNA; STD; PLN; 594 BP.
XX
AC   BT005854;
XX
DT   19-MAR-2003 (Rel. 75, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Arabidopsis thaliana At1g26450 gene, complete cds.
XX
KW   FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-594
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
XX
RN   [2]
RP   1-594
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (18-MAR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
XX
CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R.,
CC   Chen,H., Kim,C.J., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M.,
CC   Dale,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC   Yamada,K., Yu,G., Yuan,S., Davis,R.W.,  Theologis,A., and
CC   Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..594
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="U23487"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..594
FT                   /codon_start=1
FT                   /product="At1g26450"
FT                   /note="glycosyl hydrolase family 17"
FT                   /db_xref="GOA:Q9FZD0"
FT                   /db_xref="InterPro:IPR012946"
FT                   /db_xref="UniProtKB/TrEMBL:Q9FZD0"
FT                   /protein_id="AAO64789.1"
FT                   /translation="MAVLLPLFLLSFMFTYSNAAVCVCKDANELDLQKVIDFACGGGAD
FT                   CAQIQTTGACYQPNTLKNHCDVAVNSYYQKKASTGATCDFNGAAVISTSPPSTTSSCLS
FT                   SSSSNGTPTAGYPSTGNSTTASPGTTNPSTGNSTNSTLPTNDKPTSSTITFPDSTTMGP
FT                   SSSTSGDPNGGEELSVRTTTIILLTTIAAVALRV"
XX
SQ   Sequence 594 BP; 154 A; 172 C; 125 G; 143 T; 0 other;
     atggcggttt tgcttcctct gtttcttctc tctttcatgt ttacctattc aaacgcggcg        60
     gtttgtgtgt gcaaggacgc taacgagctg gatcttcaga aggtgataga cttcgcatgt       120
     ggaggaggtg ctgactgtgc acagattcag acgaccggag cttgttatca accaaacacc       180
     ctcaagaacc actgtgacgt tgccgttaac agctactatc aaaagaaagc ttccaccggt       240
     gccacatgtg acttcaacgg cgccgccgtc atctccactt cccctccttc gactacgtca       300
     agctgtttat ctagttctag ttccaacgga acccccactg ccggatatcc atccaccgga       360
     aattcaacca cagcaagtcc aggcaccaca aatccatcca caggcaattc aacaaacagc       420
     acactaccca ctaatgataa gccgacttca tctacgataa cgtttcctga cagtactact       480
     atgggaccat ctagcagcac gagtggtgat cccaacggtg gagaagagct atccgtcaga       540
     accacgacga tcatcttact gactaccatc gctgccgtgg cattgagggt ttag             594
//