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EBI DbfetchID BT005786; SV 1; linear; mRNA; STD; PLN; 1860 BP. XX AC BT005786; XX DT 17-MAR-2003 (Rel. 75, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Arabidopsis thaliana clone RAFL14-87-G18 (R20107) unknown protein DE (At3g10320) mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1860 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., RA Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Full Length cDNA Clones"; RL Unpublished. XX RN [2] RP 1-1860 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G., RA Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (15-MAR-2003) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Yamada,K., Chan,M.M., CC Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M., Onodera,C.S., CC Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C., Yu,G., CC Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., Nguyen,M., CC Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Davis,R.W., CC Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) CC contributed equally to this work as PIs. CC Annotation based on July 2002 version of the Arabidopsis genome CC submitted to Genbank. XX FH Key Location/Qualifiers FH FT source 1..1860 FT /organism="Arabidopsis thaliana" FT /chromosome="3" FT /mol_type="mRNA" FT /clone="RAFL14-87-G18 (R20107)" FT /note="This clone is in a modified pBluescript vector2 FT (lambda PS) as a BamHI/XhoI insert. ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..235 FT /gene="At3g10320" FT CDS 236..1720 FT /codon_start=1 FT /gene="At3g10320" FT /product="unknown protein" FT /db_xref="GOA:Q9SS43" FT /db_xref="InterPro:IPR007657" FT /db_xref="UniProtKB/TrEMBL:Q9SS43" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAO64189.1" FT /translation="MRQNLKKVAQIKVDESKKLFPYVFRVKTSCGNCAKRSKPKLIYLL FT IFSLISSCFVFAPQLLCFPYPSALFLIDSSIKEIENRVSESNIESPKTSQKEESISCDR FT TGYRSDICFMKGDIRTHSPSSSIFLYTSNDLTTDQVLQEKIKPYTRKWETSIMETIPEL FT KLVTKDMKLFGDKRKCEVIHEVPAVLFSTGGYTGNLYHEFNDGLIPLYITSKRFNKKVV FT FVIAEYHKWWEMKYGDVLSQLSDYSLIDFNKDKRTHCFKEAIVGLRIHGELTVDPSQMQ FT DDGTTINEFRNVLDRAYRPRINRLDRLEEQRFHARLAQRRKAKRPKLALFSRTGSRGIT FT NEDLMVKMAQRIGFDIEVLRPDRTTELAKIYRVLNSSKVMVGVHGAAMTHFLFMKPGSI FT FIQIIPLGTDWAAETYYGEPAKKLGLDYNGYKILPRESSLYEKYDKDDPILKDPNSITK FT KGWQFTKGIYLNDQKVRLDLHRFKKLLIDAYAKSIR" FT misc_difference 1327 FT /gene="At3g10320" FT /replace="a" FT /note="compared to genomic sequence" FT 3'UTR 1721..1860 FT /gene="At3g10320" FT misc_difference 1845 FT /gene="At3g10320" FT /note="not present in genomic sequence" XX SQ Sequence 1860 BP; 603 A; 384 C; 361 G; 512 T; 0 other; ctctctaaat aaatactctg atttcaaagc taaaacttac aacaacaccc acaaaacttc 60 tctctcttat ctcgtctact tgatctctct actctctttc ctctctagct acttctctcc 120 cttacgtctc caaggagata gattgacaaa ttctgttcac aaaggaaaaa agttcctctg 180 catacgtctc tctctctatg ttcttcattt atatgacttg aataacaagt aaaggatgag 240 gcagaatctg aaaaaagtag cacagatcaa agtagacgaa tctaagaagc tatttcctta 300 tgtcttccgg gttaaaactt cttgtgggaa ttgcgctaag agatcgaagc ctaagcttat 360 ctatcttctt atcttctctc ttatctcaag ttgctttgtc tttgctcctc agctcctctg 420 tttcccttac ccctctgctc tgtttctcat cgattcttca attaaagaga ttgaaaatcg 480 ggtttccgaa agcaatatag aatcacctaa gacgtcacaa aaagaagaga gcatatcttg 540 tgacagaacc ggctatcgtt cagacatctg tttcatgaaa ggcgatatca gaacacactc 600 tccttcctcc tccatctttc tctacacctc gaatgatctc accaccgatc aggtcttgca 660 agaaaaaatc aaaccataca ccagaaaatg ggaaactagt ataatggaaa ccatccctga 720 gctcaaactt gtgacaaaag atatgaagct ttttggcgac aagcgtaaat gcgaagtgat 780 ccatgaagta ccggccgtgc tattctctac cggaggatat accggaaacc tctatcatga 840 gttcaacgac gggcttattc ctttgtatat aacatctaaa cgtttcaaca aaaaggttgt 900 ctttgtgatt gctgagtatc acaagtggtg ggagatgaag tatggagatg ttctctctca 960 gctctctgat tactctctta tcgacttcaa caaagacaag agaactcact gcttcaagga 1020 agctattgtt ggtcttagaa tccatggtga gttaaccgtc gatccttctc agatgcaaga 1080 tgatggaaca accatcaatg agttcagaaa tgtacttgat cgagcttata gaccacgaat 1140 caacagactg gacaggctag aggagcaacg attccacgca agactagcac agagaagaaa 1200 ggctaagagg ccaaaactag cgttgttttc aagaaccggg tctcgaggga taacaaacga 1260 ggacctgatg gtgaaaatgg ctcagaggat cgggtttgac atcgaggttt tgagacctga 1320 cagaacgacg gaactggcaa agatttacag agtgttaaac tcaagcaaag tcatggttgg 1380 ggtacatgga gcagccatga cccattttct gttcatgaaa cctggaagta tctttattca 1440 gatcattcca ctgggaacag attgggcagc agagacatat tatggagaac cggcaaagaa 1500 gctcggtcta gactacaatg gttataagat tcttccaaga gagagctcat tgtatgaaaa 1560 atatgataaa gatgatccaa ttctaaaaga tccaaacagc atcactaaga aaggatggca 1620 attcacaaag gggatatacc tgaacgacca gaaagtgagg ttagatctcc atagattcaa 1680 gaagcttttg attgatgcgt atgcaaaatc gattaggtga cctgaaatga gttttgagag 1740 ttctttttat tgttgctgta tagtctgcat aaactacaga aattacagag ttctttttgt 1800 aaagatttaa atgaaaccat aaatgaattc aatgtttcag agactaaaaa aaaaaaaaaa 1860 // |
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