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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT005063; SV 1; linear; mRNA; STD; PLN; 1117 BP.
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AC   BT005063;
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DT   05-MAR-2003 (Rel. 75, Created)
DT   05-MAR-2003 (Rel. 75, Last updated, Version 1)
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DE   Arabidopsis thaliana clone U20790 putative N-acetylglucosaminyltransferase
DE   (At2g13290) mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1117
RA   Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA   Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G.,
RA   Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J.,
RA   Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J.,
RA   Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T.,
RA   Shinozaki K., Davis R.W., Ecker J.R., Theologis A.;
RT   "Arabidopsis Open Reading Frame (ORF) Clones";
RL   Unpublished.
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RN   [2]
RP   1-1117
RA   Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA   Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G.,
RA   Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J.,
RA   Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J.,
RA   Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T.,
RA   Shinozaki K., Davis R.W., Ecker J.R., Theologis A.;
RT   ;
RL   Submitted (04-MAR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
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CC   The RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length  cDNA'): Seki,M., Narusaka,M.,  Ishida,J.,
CC    Satou,M.,  Kamiya,A., Sakurai,T., Carninci,P.,  Kawai, J.,
CC   Hayashizaki,Y.  and  Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Yamada,K.,
CC   Chan,M.M., Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M.,
CC   Onodera,C.S.,  Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC    Yu,G., Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., Nguyen,M.,
CC   Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Davis,R.W.,
CC   Ecker,J.R. and Theologis,A.
CC   Yamada,K. (SSP/PGEC) and Seki, M. (RIKEN GSC) contributed equally
CC   to  this work.  Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP
CC   /PGEC)  contributed equally to this work as PIs.
CC   Annotation based on July 2002 version of the Arabidopsis genome
CC   submitted to Genbank.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1117
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="2"
FT                   /mol_type="mRNA"
FT                   /clone="U20790"
FT                   /note="This clone is in pUNI 51. ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1086
FT                   /codon_start=1
FT                   /gene="At2g13290"
FT                   /product="putative N-acetylglucosaminyltransferase"
FT                   /db_xref="GOA:Q9SKF0"
FT                   /db_xref="InterPro:IPR006813"
FT                   /db_xref="UniProtKB/TrEMBL:Q9SKF0"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAO50596.1"
FT                   /translation="MTIRSLRKPPPVKLVFPTLIILFLTCLLCILTNFQTISYLFRPLW
FT                   DKPPPPFKRIPHYYAENVSMGHLCELHGWTPRLEPRRVFDAIIFSNELDLLEVRWRELE
FT                   PYVSKFVILESNTTFTGIPKPLFFDSNKERFAFAEGKIVHGVFPGKKRSTGQPYEDPFL
FT                   LEGQQRVAMNWLLREAGVSDGDAVIMSDADEIPSPHTVKFLQWCDGIPDVMHLEMREYM
FT                   YSFEFPVDYSSWRASVHIYSRKWTQYRHSRQTDLILSDAGWHCSFCFRRLNEFVFKMKG
FT                   YSHADRVKRKEFLDYQRIQKHICKGYDLFDMLPEKYSFQELISKIGPIPPSASAVHLPA
FT                   FLIQNAARFRFLLPGGCLREP"
FT   3'UTR           1087..1117
FT                   /gene="At2g13290"
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SQ   Sequence 1117 BP; 286 A; 224 C; 281 G; 326 T; 0 other;
     atgacgattc gatcgttgcg taaaccaccg ccggttaaac ttgtgtttcc tactctgatt        60
     atactcttct tgacatgttt gttatgtatc ttaacaaatt tccaaaccat atcgtatctt       120
     ttccgtccgc tttgggataa accgccaccg ccttttaaac ggataccgca ttactatgcg       180
     gagaatgttt ccatgggaca tctttgtgag cttcacggct ggacaccgcg gttagaaccg       240
     aggcgagtgt ttgatgccat cattttcagt aatgagcttg atcttcttga agtcagatgg       300
     cgggaattgg agccttatgt gtcgaagttt gtgatattgg agtcaaacac tacgtttacc       360
     gggatcccga agccgctttt cttcgattcc aataaggaga gatttgcgtt tgcggagggg       420
     aagattgtac atggagtgtt tcctgggaag aaacggtcta cggggcagcc gtatgaggat       480
     ccgtttttgc ttgaggggca acagcgagtt gcgatgaact ggttgcttag agaagctggt       540
     gtatcggatg gagatgcggt gataatgtca gatgcagacg agattccgag tcctcatact       600
     gtgaagtttc tacagtggtg tgatgggata ccagatgtaa tgcatttgga gatgagggaa       660
     tacatgtact cctttgagtt tccggttgat tacagtagct ggagagcctc tgttcatata       720
     tatagtagga agtggactca ataccggcac tcacgacaaa cggacttgat attatccgac       780
     gcagggtggc attgcagctt ctgtttcaga cgactcaacg agtttgtttt caagatgaaa       840
     ggttatagtc atgcagatag agtcaaacgc aaggagtttt tggattatca gaggatacaa       900
     aaacatattt gcaaaggtta tgatctcttt gacatgcttc ctgaaaaata cagcttccaa       960
     gagttgatta gcaaaatcgg acccatcccg ccttctgcgt ctgcggtaca tctaccagcc      1020
     tttttgattc agaacgctgc tcgctttcgg tttctcctcc cgggaggttg tctccgagaa      1080
     ccctagctga agattaagta caaaatagag aagcaat                               1117
//
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