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EBI DbfetchID BT004221; SV 1; linear; mRNA; STD; PLN; 1443 BP. XX AC BT004221; XX DT 17-FEB-2003 (Rel. 74, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Arabidopsis thaliana clone RAFL15-23-O16 (R20790) putative DE N-acetylglucosaminyltransferase (At2g13290) mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1443 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., RA Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Full Length cDNA Clones"; RL Unpublished. XX RN [2] RP 1-1443 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G., RA Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (14-FEB-2003) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Yamada,K., Chan,M.M., CC Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M., Onodera,C.S., CC Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C., Yu,G., CC Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., Nguyen,M., CC Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Davis,R.W., CC Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) CC contributed equally to this work as PIs. CC Annotation based on July 2002 version of the Arabidopsis genome CC submitted to Genbank. XX FH Key Location/Qualifiers FH FT source 1..1443 FT /organism="Arabidopsis thaliana" FT /chromosome="2" FT /mol_type="mRNA" FT /clone="RAFL15-23-O16 (R20790)" FT /note="This clone is in a modified pBluescript vector2 FT (lambda PS) as a BamHI/XhoI insert. ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..230 FT /gene="At2g13290" FT misc_difference 2 FT /gene="At2g13290" FT /replace="a" FT /note="compared to genomic sequence" FT CDS 231..1316 FT /codon_start=1 FT /gene="At2g13290" FT /product="putative N-acetylglucosaminyltransferase" FT /db_xref="GOA:Q9SKF0" FT /db_xref="InterPro:IPR006813" FT /db_xref="UniProtKB/TrEMBL:Q9SKF0" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAO42238.1" FT /translation="MTIRSLRKPPPVKLVFPTLIILFLTCLLCILTNFQTISYLFRPLW FT DKPPPPFKRIPHYYAENVSMGHLCELHGWTPRLEPRRVFDAIIFSNELDLLEVRWRELE FT PYVSKFVILESNTTFTGIPKPLFFDSNKERFAFAEGKIVHGVFPGKKRSTGQPYEDPFL FT LEGQQRVAMNWLLREAGVSDGDAVIMSDADEIPSPHTVKFLQWCDGIPDVMHLEMREYM FT YSFEFPVDYSSWRASVHIYSRKWTQYRHSRQTDLILSDAGWHCSFCFRRLNEFVFKMKG FT YSHADRVKRKEFLDYQRIQKHICKGYDLFDMLPEKYSFQELISKIGPIPPSASAVHLPA FT FLIQNAARFRFLLPGGCLREP" FT 3'UTR 1317..1443 FT /gene="At2g13290" FT misc_difference 1426 FT /gene="At2g13290" FT /replace="a" FT /note="compared to genomic sequence" XX SQ Sequence 1443 BP; 410 A; 284 C; 328 G; 421 T; 0 other; gggaggttta gcggtcgttt tacattcttc caaagctctc tcttttacag cttttcacaa 60 acaaatccca aatctgattc tttcagctaa aattcttcca tcaatcaatc gaattgtcaa 120 aaaaaagata tcacaaccct tcgtgtgttc tcatttctta atcttataca cttgaaatct 180 ccaaaaaggg gaaaaagaaa atgagttggt gaagtttgag aaccatagag atgacgattc 240 gatcgttgcg taaaccaccg ccggttaaac ttgtgtttcc tactctgatt atactcttct 300 tgacatgttt gttatgtatc ttaacaaatt tccaaaccat atcgtatctt ttccgtccgc 360 tttgggataa accgccaccg ccttttaaac ggataccgca ttactatgcg gagaatgttt 420 ccatgggaca tctttgtgag cttcacggct ggacaccgcg gttagaaccg aggcgagtgt 480 ttgatgccat cattttcagt aatgagcttg atcttcttga agtcagatgg cgggaattgg 540 agccttatgt gtcgaagttt gtgatattgg agtcaaacac tacgtttacc gggatcccga 600 agccgctttt cttcgattcc aataaggaga gatttgcgtt tgcggagggg aagattgtac 660 atggagtgtt tcctgggaag aaacggtcta cggggcagcc gtatgaggat ccgtttttgc 720 ttgaggggca acagcgagtt gcgatgaact ggttgcttag agaagctggt gtatcggatg 780 gagatgcggt gataatgtca gatgcagacg agattccgag tcctcatact gtgaagtttc 840 tacagtggtg tgatgggata ccagatgtaa tgcatttgga gatgagggaa tacatgtact 900 cctttgagtt tccggttgat tacagtagct ggagagcctc tgttcatata tatagtagga 960 agtggactca ataccggcac tcacgacaaa cggacttgat attatccgac gcagggtggc 1020 attgcagctt ctgtttcaga cgactcaacg agtttgtttt caagatgaaa ggttatagtc 1080 atgcagatag agtcaaacgc aaggagtttt tggattatca gaggatacaa aaacatattt 1140 gcaaaggtta tgatctcttt gacatgcttc ctgaaaaata cagcttccaa gagttgatta 1200 gcaaaatcgg acccatcccg ccttctgcgt ctgcggtaca tctaccagcc tttttgattc 1260 agaacgctgc tcgctttcgg tttctcctcc cgggaggttg tctccgagaa ccctagctga 1320 agattaagta caaaatagag aagcaatagt ttcttgttac aaaggttttt ggcgtcacac 1380 caacttaacc tgaaacaaca gataaataaa gaaatagatc ttatagcaaa aaaaaaaaaa 1440 aaa 1443 // |
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