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EBI DbfetchID BT004121; SV 1; linear; mRNA; STD; PLN; 2325 BP. XX AC BT004121; XX DT 17-FEB-2003 (Rel. 74, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Arabidopsis thaliana clone RAFL15-08-N13 (R20671) unknown protein DE (At4g37950) mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-2325 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., RA Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Full Length cDNA Clones"; RL Unpublished. XX RN [2] RP 1-2325 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G., RA Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (14-FEB-2003) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Yamada,K., Chan,M.M., CC Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M., Onodera,C.S., CC Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C., Yu,G., CC Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., Nguyen,M., CC Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Davis,R.W., CC Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) CC contributed equally to this work as PIs. CC Annotation based on July 2002 version of the Arabidopsis genome CC submitted to Genbank. XX FH Key Location/Qualifiers FH FT source 1..2325 FT /organism="Arabidopsis thaliana" FT /chromosome="4" FT /mol_type="mRNA" FT /clone="RAFL15-08-N13 (R20671)" FT /note="This clone is in a modified pBluescript vector2 FT (lambda PS) as a BamHI/XhoI insert. ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..155 FT /gene="At4g37950" FT CDS 156..2192 FT /codon_start=1 FT /gene="At4g37950" FT /product="unknown protein" FT /note="This cDNA contains the coding regions of annotated FT genes At4g37950 (GI:15235751) & At4g37960 (GI:15235754). FT Presumably there is only one gene; we have named this gene FT to be At4g37950." FT /db_xref="GOA:Q84W85" FT /db_xref="InterPro:IPR010325" FT /db_xref="UniProtKB/TrEMBL:Q84W85" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAO42144.1" FT /translation="MEYGAPGMKAGRRVLTPLFVLVFLLQGVHSQTSRNKFNIAKAGHK FT LASPPVTLKKVGDNQVVVDNGIIDVTFSSPQGLITRIKYNGLNNVLNDQIENRGYWDVV FT WYKPGQVSSTDYLVGTKFDIVNQTSEQIEISFSRTFSQRGSGIPLNVDKRYIIRRGVSG FT IYMYAVLERLIGWPDVDMDQIRIVFKLNTTKFDFMAVSDNRQKIMPFDTDRDITKGRAS FT PLAYKEAVHLINPQNHMLKGQVDDKYMYSVENKDNKVHGWISSDQRIGFWMITPSDEFH FT ACGPIKQDLTSHVGPTTLSMFTSVHYAGKDMNTNYKSKEPWKKVFGPVFVYLNSASSRN FT LLWTDAKRQMVSEVQSWPYDFVKSVDYPLHHQRGTVKGQLFVIDRYIKNVTYLFGQFAF FT VGLALPGEAGSWQTENKGYQFWTRADKMGMFTIANVRPGTYSLYAWVSGFIGDYKYVRD FT ITITPGREIDVGHIVYVPPRNGPTLWEIGQPDRTAAEFYIPDPDPTLFTKLYLNYSNPQ FT DRFRQYGLWDRYSVLYPRNDLVFTAGVSDYKKDWFYAHVNRKAGNGTYKATTWQIKFNL FT KAVIQTRIYTLRIALAAASTIDLLVWVNEVDSKPLFITGLIGRDNAIARHGIHGLYKLY FT NIDVHGKLLRVGNNTIFLTHGRNSDSFSGVMYDYLRLEGPSGV" FT misc_difference 806 FT /gene="At4g37950" FT /replace="c" FT /note="compared to genomic sequence" FT 3'UTR 2193..2325 FT /gene="At4g37950" XX SQ Sequence 2325 BP; 753 A; 433 C; 500 G; 639 T; 0 other; gttaataaga tggtaagata caatatttta cgagagatat aactttcttc agtggagaga 60 gctcctctta tccgaggaat caaagctgca aaggaatcca acaaaggaga agataaaccg 120 ttaaagtgtc taagtcaacc gaattggcca aggagatgga atacggagct ccgggaatga 180 aggctggtcg ccgggttcta actccacttt tcgttctagt tttccttctt caaggtgttc 240 attctcaaac atcacgaaac aaattcaaca tcgcaaaagc gggacataaa cttgcatctc 300 ccccggttac gcttaagaaa gttggtgata accaagtggt cgttgataac ggtatcatcg 360 atgttacctt ctcgagtcca caaggattaa taactagaat caagtacaat ggcttaaaca 420 atgtgttgaa cgaccaaatt gaaaatcggg ggtactggga cgtagtatgg tacaaaccag 480 gacaagtatc gtcaactgat tatttagtag gaacaaaatt cgatattgta aatcaaacaa 540 gtgaacaaat tgaaatttca ttttcgagaa cgttctctca acggggctca ggaatcccat 600 taaacgtaga caaacgatat attattcgaa gaggtgtatc cggaatatac atgtacgctg 660 tattggagag gttaataggt tggcctgacg tggacatgga ccaaatcaga atcgtcttca 720 agcttaacac aacaaaattc gatttcatgg ctgtttccga taatcggcaa aaaataatgc 780 cttttgatac agatcgagac attacaaaag gtcgtgccag tccattggct tacaaagaag 840 ctgttcattt gataaatcca caaaatcata tgcttaaagg gcaggtagac gataagtaca 900 tgtactcggt ggaaaacaaa gacaacaaag tacacggttg gatatcgtcg gaccaacgta 960 tcggtttctg gatgatcacg cccagcgacg agttccatgc atgtgggccg atcaaacaag 1020 atctcacttc tcatgtgggc cccaccactc tttcgatgtt tacaagtgta cattacgcgg 1080 gaaaagatat gaacacaaat tataaaagca aggaaccgtg gaagaaggtg tttggtcctg 1140 tctttgttta tctcaattct gcttcttctc gtaatcttct ctggaccgat gctaaacgac 1200 agatggtttc cgaggtccaa agctggcctt atgatttcgt gaaatctgta gattaccctc 1260 ttcatcacca aagaggaaca gtcaagggtc aattatttgt catagacaga tacatcaaaa 1320 acgtgacgta cttattcggg caatttgctt ttgtgggatt agcattacct ggtgaagctg 1380 gttcttggca aaccgaaaac aagggatatc aattttggac acgagcagac aaaatgggaa 1440 tgttcacaat agcgaatgtg agaccaggga cgtatagtct ctacgcatgg gtttctggat 1500 ttatcggtga ctataaatat gtgcgtgaca ttaccatcac accaggtagg gagatagacg 1560 ttggacacat agtgtacgtg ccaccgagaa acggcccaac actgtgggag atcggacaac 1620 cggaccgaac cgcggcagaa ttctatatcc cagatccgga cccaaccctt ttcaccaaac 1680 tttatctaaa ttactcaaat cctcaagata gatttagaca gtatggtcta tgggatcgtt 1740 acagtgtttt gtatcctcga aacgatcttg tttttactgc tggagtgagt gactataaaa 1800 aagactggtt ctatgcccat gtcaacagga aagctggaaa tgggacatat aaagcaacga 1860 catggcaaat taagtttaat ttgaaagcag tgattcaaac tagaatatac acacttcgaa 1920 tagctttggc tgcagcctca acaattgatc tactggtttg ggtcaacgaa gttgattcca 1980 aacctctatt cataactggg ctaatcggtc gggataacgc gatcgcgagg catgggattc 2040 atgggttgta caaattgtac aatatcgatg ttcatggaaa gttacttagg gttggtaata 2100 atactatttt tcttactcat ggtcggaact ctgattcttt ttcaggtgta atgtatgatt 2160 atcttcgttt ggaaggtcct tccggagttt gataaactaa atacatatat taatgtgtaa 2220 gtaataggag ggattatata ttttaattag tagtcaaaag tctaaaatat atatagaaaa 2280 aaattgtttg acaattaaat ttgttactaa aaaaaaaaaa aaaaa 2325 // |
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