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EBI DbfetchID BT003870; SV 1; linear; mRNA; STD; PLN; 1552 BP. XX AC BT003870; XX DT 17-FEB-2003 (Rel. 74, Created) DT 17-FEB-2003 (Rel. 74, Last updated, Version 1) XX DE Arabidopsis thaliana clone RAFL15-41-D24 (R20882) putative DE pectinacetylesterase (At3g62060) mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1552 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., RA Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Full Length cDNA Clones"; RL Unpublished. XX RN [2] RP 1-1552 RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., RA Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G., RA Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., RA Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., RA Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., RA Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (14-FEB-2003) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Yamada,K., Chan,M.M., CC Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M., Onodera,C.S., CC Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C., Yu,G., CC Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., Nguyen,M., CC Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Davis,R.W., CC Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) CC contributed equally to this work as PIs. CC Annotation based on July 2002 version of the Arabidopsis genome CC submitted to Genbank. XX FH Key Location/Qualifiers FH FT source 1..1552 FT /organism="Arabidopsis thaliana" FT /chromosome="3" FT /mol_type="mRNA" FT /clone="RAFL15-41-D24 (R20882)" FT /note="This clone is in a modified pBluescript vector2 FT (lambda PS) as a BamHI/XhoI insert. ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..66 FT /gene="At3g62060" FT CDS 67..1326 FT /codon_start=1 FT /gene="At3g62060" FT /product="putative pectinacetylesterase" FT /db_xref="InterPro:IPR004963" FT /db_xref="UniProtKB/TrEMBL:Q84JS1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAO41919.1" FT /translation="MRSLLLWIAVVVCLLCSVAAVVQSGSSDGFGKPRDTETAISFLEY FT KLMAPSVPMIPLTLIHGADSKGAVCLDGTLPGYHLDRGFGSGANSWLIQLEGGGWCNNH FT RSCVYRKTSRRGSSKFMEKALAFTGILSNRSEENPDFFNWNRIKLRYCDGASFSGDSQD FT ESSQLFYRGQRIWQVAMEEFLSLGMKQANQALLSGCSAGGLASILHCDEFRELLPSSTK FT VKCLSDAGMFLDSVDVSGGHSLRNMFQGVVTVQNLQKDLSSTCTNHLDPTSCFFPQNLV FT SDIKTPMFLLNTAYDSWQIQESLAPPTADPGGIWKACKSDHSRCNSSQIQFFQEFRNQM FT LFAVNSFSNSDQNGLYINSCFAHCQTERQDTWFAQDSPQLNGKRVAESVGDWYFDRAKN FT VKAIDCPYPCDTTCHNLIFE" FT 3'UTR 1327..1552 FT /gene="At3g62060" XX SQ Sequence 1552 BP; 411 A; 318 C; 349 G; 474 T; 0 other; aaattttcgc gctcgattcg tcttttctgt atctcccgga gctccgggac ttgggcggaa 60 gaggagatga ggagcttgtt gttgtggatt gcggtggtcg tgtgcttgct atgttcagtc 120 gcggcggtgg ttcaaagcgg atctagcgac ggatttggga aacccagaga tactgagact 180 gcgatatctt ttctggagta taaattgatg gcgccttcgg ttccaatgat acctctcacc 240 ttgattcacg gagctgactc taaaggagct gtgtgcttag atgggacgct acctggttat 300 catctagatc gtggttttgg atcaggtgct aacagttggc ttatccagct tgagggtgga 360 ggatggtgta acaaccatag gagctgtgtg tatcgcaaaa caagtcgacg tggttcctct 420 aaattcatgg aaaaagcttt ggccttcact ggaattttga gcaatagatc tgaagagaat 480 cctgacttct ttaattggaa caggatcaag ttgcgttact gcgatggtgc gtctttctct 540 ggtgatagtc aggacgagag ttcgcaactt ttctatcgag gacaacgaat ctggcaagtg 600 gctatggaag aattcctgtc tttaggcatg aagcaagcaa accaggctct gctctctgga 660 tgttcagctg gaggattagc ttctattttg cactgtgatg agttcaggga actattacct 720 agttccacga aagtaaaatg cttaagtgat gctggaatgt ttctggactc agtggatgtc 780 tctgggggcc actcgcttag gaatatgttc caaggtgttg ttacagtgca gaacctccaa 840 aaggacttgt ccagtacttg tacaaaccat ttggatccta cttcgtgctt ttttccccag 900 aacttggttt cagacattaa aaccccaatg tttcttctca acacagcata tgactcttgg 960 cagatccaag agagcttagc tcctcctact gctgatccag gcggtatctg gaaggcatgc 1020 aaatcagatc actcgcgatg taattcatca cagatccaat tcttccaaga attcaggaat 1080 caaatgctgt ttgctgtaaa ctcattctca aactctgacc agaacggtct ttatataaac 1140 tcttgcttcg cgcattgtca gactgaaaga caggacactt ggtttgctca agattctcct 1200 caactaaacg gaaagagagt cgcagagtct gtaggtgact ggtacttcga ccgagcaaaa 1260 aatgtcaaag ctatcgattg tccttaccct tgtgacacaa catgtcacaa tctgattttc 1320 gagtgagtaa atcgttgaac cccatttctc tgattctttc aaacttataa gttataccat 1380 tattgcctta aattccttcc atatttatcc taacttccaa atgtgcaaca tttgtgtatc 1440 tcaaatgaga atcatttagt ttgtcgattc agatcataat ttatatttgc atgaccttga 1500 tttttcgatt gaaataagct ttctttcgat gtttataaaa aaaaaaaaaa aa 1552 // |
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