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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT003143; SV 1; linear; mRNA; STD; PLN; 1155 BP.
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AC   BT003143;
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DT   22-JAN-2003 (Rel. 74, Created)
DT   22-JAN-2003 (Rel. 74, Last updated, Version 1)
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DE   Arabidopsis thaliana At3g18170 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1155
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1155
RA   Shinn P., Chen H., Cheuk R., Kim C.J., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (21-JAN-2003) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Shinn,P.,
CC   Chen,H., Cheuk,R., Kim,C.J.,  Bowser,L., Chan, M.M., Chang,C.M.,
CC   Dale,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC   Yamada,K., Yu,G., Yuan,S., Davis,R.W.,  Theologis,A., and
CC   Ecker,J.R.
CC   Shinn,P. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1155
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /mol_type="mRNA"
FT                   /clone="U23370"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1155
FT                   /codon_start=1
FT                   /product="At3g18170"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:Q84WJ6"
FT                   /db_xref="InterPro:IPR007657"
FT                   /db_xref="UniProtKB/TrEMBL:Q84WJ6"
FT                   /protein_id="AAO24575.1"
FT                   /translation="MKPICTKLARTEFCELNGDVRVHGKSATVSAAITFAFSGNSTWHI
FT                   RPYARKGDTVAMKRVREWTVKLEQNADQLENANFSRCVRNHSVPAMIFSLGGYSMNNFH
FT                   DFTDIVIPLYTTARRFNGEVQFLVTNKSPSWINKFKELVRKLSNYEVIYIDEEDETHCF
FT                   SSVTVGLTRHREYFKELTIDPSNSEYSMSDFRSFLRDTYSLRNDAVATRQIRRRRPRIL
FT                   ILARGRSRAFVNTGEIARAARQIGFKVVVAEANIGIAKFAQTVNSCDVMLGVHGAGLTN
FT                   MVFLPENAVVIQVLPIGGFEWLAKTDFEKPSEGMNLRYLEYKIAVEESTLVKKYGRDHE
FT                   IVRDPSAVAKHGWEMFKSVYLVQQNVSIDINRFKPVLVKALELL"
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SQ   Sequence 1155 BP; 314 A; 246 C; 328 G; 267 T; 0 other;
     atgaaaccta tatgcaccaa gctagcaaga acagagttct gtgaattaaa cggcgacgta        60
     agagtccacg gtaagtccgc gactgtttct gctgcgatca cgtttgcgtt ttcgggaaat       120
     tccacgtggc atataagacc ttacgcgcga aaaggtgaca cggtggcaat gaagcgcgtg       180
     agagaatgga cggtgaaatt ggaacaaaac gctgaccaat tagaaaacgc taatttctcg       240
     cgttgcgtta ggaatcacag cgttccggcg atgattttct ctctcggagg ctactcgatg       300
     aacaatttcc acgatttcac cgatatagtg attcctctgt acacgacggc gcgtcgattc       360
     aacggagaag tacagtttct cgtgacgaac aagagtccat cgtggatcaa caaatttaag       420
     gaattagtga ggaaactctc taattacgaa gtgatttaca tcgacgaaga agacgaaacg       480
     cattgtttca gcagcgtcac cgtcggtctc actcgccacc gtgagtattt caaagagttg       540
     acgatcgatc cttcgaattc ggagtattca atgtccgatt tccggagttt tctaagagac       600
     acctactcgt tgagaaacga cgccgtggct acgagacaga tccggcggcg gaggccacgg       660
     attctgattt tggctagagg cagatcgcga gcgttcgtaa acaccggcga aatcgcgaga       720
     gcggcgagac agatcggatt caaagtcgtg gtggcggaag cgaacatcgg aatcgcgaaa       780
     ttcgcgcaaa cggtgaattc ctgcgacgtg atgctcggcg ttcacggcgc ggggctgacg       840
     aacatggtgt tcttgccgga gaacgcggtg gtgattcagg ttcttccgat cggtggattc       900
     gagtggcttg cgaaaacgga ttttgagaaa ccttcggagg gaatgaatct gaggtacttg       960
     gagtacaaga tcgcggtgga ggagagcacg ctggtgaaga agtacggacg cgaccacgaa      1020
     atcgtgagag atccatcggc ggttgcaaaa cacgggtggg aaatgttcaa atcggtttat      1080
     ttggtacaac agaacgtgag tattgatata aaccggttca agccggttct tgtcaaagct      1140
     cttgagttat tgtag                                                       1155
//
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