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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT003019; SV 1; linear; mRNA; STD; PLN; 1503 BP.
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AC   BT003019;
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DT   17-JAN-2003 (Rel. 74, Created)
DT   17-JAN-2003 (Rel. 74, Last updated, Version 1)
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DE   Arabidopsis thaliana At2g41640/T32G6.16 gene, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1503
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1503
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (16-JAN-2003) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R.,
CC   Chen,H., Kim,C.J., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M.,
CC   Dale,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC   Yamada,K., Yu,G., Yuan,S., Davis,R.W.,  Theologis,A., and
CC   Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1503
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="2"
FT                   /mol_type="mRNA"
FT                   /clone="U14091"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1503
FT                   /codon_start=1
FT                   /product="At2g41640/T32G6.16"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:O22225"
FT                   /db_xref="InterPro:IPR007657"
FT                   /db_xref="UniProtKB/TrEMBL:O22225"
FT                   /protein_id="AAO23584.1"
FT                   /translation="MVQYQRLIIHHGRKEDKFRVSSAEESGGGGCCYSKRAKQKFRCLL
FT                   FLSILSCCFVLSPYYLFGFSTLSLLDSFRREIEGLSSYEPVITPLCSEISNGTICCDRT
FT                   GLRSDICVMKGDVRTNSASSSIFLFTSSTNNNTKPEKIKPYTRKWETSVMDTVQELNLI
FT                   TKDSNKSSDRVCDVYHDVPAVFFSTGGYTGNVYHEFNDGIIPLFITSQHYNKKVVFVIV
FT                   EYHDWWEMKYGDVVSQLSDYPLVDFNGDTRTHCFKEATVGLRIHDELTVNSSLVIGNQT
FT                   IVDFRNVLDRGYSHRIQSLTQEETEANVTALDFKKKPKLVILSRNGSSRAILNENLLVE
FT                   LAEKTGFNVEVLRPQKTTEMAKIYRSLNTSDVMIGVHGAAMTHFLFLKPKTVFIQIIPL
FT                   GTDWAAETYYGEPAKKLGLKYVGYKIAPKESSLYEEYGKDDPVIRDPDSLNDKGWEYTK
FT                   KIYLQGQNVKLDLRRFRETLTRSYDFSIRRRFREDYLLHRED"
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SQ   Sequence 1503 BP; 451 A; 300 C; 337 G; 415 T; 0 other;
     atggtgcagt accagagatt aatcatccac catggaagaa aagaagataa gtttagagtt        60
     tcttcagcag aggaaagtgg tggaggtggt tgttgctact ccaagagagc taaacaaaag       120
     tttcgttgtc ttctctttct ctctatcctc tcttgctgtt tcgtcttgtc tccttattac       180
     ctcttcggct tctctactct ctccctccta gattcgtttc gcagagaaat cgaaggtctt       240
     agctcttatg agccagttat tacccctctg tgctcagaaa tctccaatgg aaccatttgt       300
     tgtgacagaa ccggtttgag atctgatatt tgtgtaatga aaggtgatgt tcgaacaaac       360
     tctgcttctt cctcaatctt cctcttcacc tcctccacca ataacaacac aaaaccggaa       420
     aagatcaaac cttacactag aaaatgggag actagtgtga tggacaccgt tcaagaactc       480
     aacctcatca ccaaagattc caacaaatct tcagatcgtg tatgcgatgt gtaccatgat       540
     gttcctgctg tgttcttctc cactggtgga tacaccggta acgtatacca cgagtttaac       600
     gacgggatta tccctttgtt tataacttca cagcattaca acaaaaaagt tgtgtttgtg       660
     atcgtcgagt atcatgactg gtgggagatg aagtatggag atgtcgtttc gcagctctcg       720
     gattatcctc tggttgattt caatggagat acgagaacac attgtttcaa agaagcaacc       780
     gttggattac gtattcacga cgagttaact gtgaattctt ctttggtcat tgggaatcaa       840
     accattgttg acttcagaaa cgttttggat aggggttact cgcatcgtat ccaaagcttg       900
     actcaggagg aaacagaggc gaacgtgacc gcactcgatt tcaagaagaa gccaaaactg       960
     gtgattcttt caagaaacgg gtcatcaagg gcgatattaa acgagaatct tctcgtggag      1020
     ctagcagaga aaacagggtt caatgtggag gttctaagac cacaaaagac aacggaaatg      1080
     gccaagattt atcgttcgtt gaacacgagc gatgtaatga tcggtgtaca tggagcagca      1140
     atgactcatt tccttttctt gaaaccgaaa accgttttca ttcagatcat cccattaggg      1200
     acggactggg cggcagagac atattatgga gaaccggcga agaagctagg attgaagtac      1260
     gttggttaca agattgcgcc gaaagagagc tctttgtatg aagaatatgg gaaagatgac      1320
     cctgtaatcc gagatccgga tagtctaaac gacaaaggat gggaatatac gaagaaaatc      1380
     tatctacaag gacagaacgt gaagcttgac ttgagaagat tcagagaaac gttaactcgt      1440
     tcgtatgatt tctccattag aaggagattt agagaagatt acttgttaca tagagaagat      1500
     taa                                                                    1503
//
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