EBI Dbfetch

ID   BT002634; SV 1; linear; mRNA; STD; PLN; 1332 BP.
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AC   BT002634;
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DT   27-DEC-2002 (Rel. 74, Created)
DT   27-DEC-2002 (Rel. 74, Last updated, Version 1)
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DE   Arabidopsis thaliana At5g44930/K21C13_11 gene, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1332
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1332
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (23-DEC-2002) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R.,
CC   Chen,H., Kim,C.J., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M.,
CC   Dale,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC   Yamada,K., Yu,G., Yuan,S., Davis,R.W.,  Theologis,A., and
CC   Ecker,J.R.
CC   Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1332
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /mol_type="mRNA"
FT                   /clone="U13094"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1332
FT                   /codon_start=1
FT                   /product="At5g44930/K21C13_11"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:Q9FLA5"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q9FLA5"
FT                   /protein_id="AAO11550.1"
FT                   /translation="MNPKIRKPNNSSSKKVTVSVLSVFLVFVFVNTFFYPSFYSDSGSI
FT                   RRNLVDSRESFHFPGNFRKTKVYMYELPTNFTYGVIEQHGGEKSDDVTGLKYPGHQHMH
FT                   EWYLYSDLTRPEVKRVGSPIVRVFDPAEADLFYVSAFSSLSLIVDSGRPGFGYSDEEMQ
FT                   ESLVSWLESQEWWRRNNGRDHVIVAGDPNALKRVMDRVKNAVLLVTDFDRLRADQGSLV
FT                   KDVIIPYSHRIDAYEGELGVKQRTNLLFFMGNRYRKDGGKVRDLLFKLLEKEEDVVIKR
FT                   GTQSRENMRAVKQGMHTSKFCLHLAGDTSSACRLFDAIASLCVPVIVSDGIELPFEDVI
FT                   DYRKFSIFLRRDAALKPGFVVKKLRKVKPGKILKYQKVMKEVRRYFDYTHLNGSVNEIW
FT                   RQVTKKIPLIKLMINREKRMIKRDGSDPQCSCLCSNQTGIIHGV"
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SQ   Sequence 1332 BP; 367 A; 230 C; 348 G; 387 T; 0 other;
     atgaacccca aaatcagaaa acccaataat tcatcttcga agaaggtcac agtttccgtt        60
     ctctctgttt tcttagtgtt cgtcttcgtt aatactttct tctacccaag tttttactct       120
     gactctggct caattcgacg caatctcgtt gattctcgag aaagtttcca ttttccggga       180
     aattttcgta aaacgaaggt ttacatgtac gaattgccga cgaattttac ttacggagtt       240
     atcgagcaac acggcggaga aaaatctgat gacgtcaccg ggttgaaata tccgggtcat       300
     cagcatatgc atgagtggta tctttactcg gatcttaccc gacccgaagt taaacgagtc       360
     gggtctccga ttgtaagggt ttttgacccg gctgaggcgg atttgtttta cgtctctgct       420
     ttctcttcgt taagcttgat tgtggattcg ggtcggcccg ggtttgggta cagtgatgag       480
     gagatgcagg agagtttggt gagttggtta gaaagtcaag aatggtggag gaggaacaat       540
     gggagggatc atgtgattgt tgccggtgat ccaaatgcgt tgaaacgggt catggatcgg       600
     gttaagaatg cggttttgct tgtgacggat tttgaccggt taagagcaga ccaagggtcg       660
     cttgtgaaag acgtaatcat accttattct cataggattg atgcttatga aggcgagctt       720
     ggagttaagc agaggaccaa cttgttgttc ttcatgggaa atcgatatcg caaagatgga       780
     ggcaaagtcc gagatttgct tttcaagctg cttgagaaag aagaggatgt tgtgatcaaa       840
     cgcggaacac agtcaagaga gaatatgcgt gcggttaaac aaggaatgca tacgtctaag       900
     ttttgtctac atctagctgg tgatacttct tctgcttgca gattatttga tgccattgct       960
     agtttatgtg tcccggtgat tgtaagcgat gggattgagc taccttttga agatgtcata      1020
     gattacagga agttctctat attcttgagg agagatgccg ctttgaaacc agggtttgtg      1080
     gttaagaagc tgaggaaagt gaaaccagga aagattttga agtaccaaaa ggttatgaaa      1140
     gaggttaggc gatattttga ctatacacat ctaaatggaa gtgtgaacga gatctggaga      1200
     caagttacta agaagatacc gctaatcaaa ctgatgatta atcgggagaa gcgcatgatc      1260
     aagagagatg gaagtgaccc tcaatgttct tgtttatgct caaaccaaac cgggatcatc      1320
     catggtgtct ag                                                          1332
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