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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BT002613; SV 1; linear; mRNA; STD; PLN; 1386 BP.
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AC   BT002613;
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DT   27-DEC-2002 (Rel. 74, Created)
DT   27-DEC-2002 (Rel. 74, Last updated, Version 1)
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DE   Arabidopsis thaliana At1g74680/F1M20_36 mRNA, complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1386
RA   Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   "Arabidopsis ORF clones";
RL   Unpublished.
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RN   [2]
RP   1-1386
RA   Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Chan M.M.,
RA   Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L.,
RA   Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M.,
RA   Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W.,
RA   Theologis A., Ecker J.R.;
RT   ;
RL   Submitted (23-DEC-2002) to the EMBL/GenBank/DDBJ databases.
RL   Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology
RL   Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey
RL   Pines Road, La Jolla, CA 92037, USA
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CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Kim,C.J.,
CC   Chen,H., Cheuk,R., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M.,
CC   Dale,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., Lam,B.,
CC   Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera, C.S., Palm,C.J.,
CC   Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC   Yamada,K., Yu,G., Yuan,S., Davis,R.W.,  Theologis,A., and
CC   Ecker,J.R.
CC   Kim,C.J. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
CC   this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
CC   contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1386
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="mRNA"
FT                   /clone="U14636"
FT                   /note="This clone is in pUNI 51 ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1386
FT                   /codon_start=1
FT                   /product="At1g74680/F1M20_36"
FT                   /note="unknown protein"
FT                   /db_xref="GOA:Q93ZD5"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q93ZD5"
FT                   /protein_id="AAO11529.1"
FT                   /translation="MIKMSEKSLLSSKFLFYTITVSTLLFIVSSLVFLQRHDSSFTSSL
FT                   VRKLILPRTDIKNEEFGLIDTKCDRDRDVLKVFMYDLPSEFHFGILNWHKKGSEIWPNV
FT                   NNISTIPSYPGGLNRQHSVEYWLTLDLLASETPEIKRPCSSAAIRVKNSNEADIVFVPF
FT                   FASLSYNRKSKLRGNETSSDDRLLQERLVEFLKSQDEWKRFDGKDHLIVAHHPNSLLYA
FT                   RNFLGSAMFVLSDFGRYSSAIANLEKDIIAPYVHVVKTISNNESASFEKRPVLAYFQGA
FT                   IYRKDGGTIRQELYNLLKDEKDVHFAFGTVRGNGTKQTGKGMASSKFCLNIAGDTPSSN
FT                   RLFDAIVSHCVPVIISDQIELPFEDTLDYSGFSVFVHASEAVKKEFLVNILRGITEDQW
FT                   KKKWGRLKEVAGCFEYRFPSQVGDSVNMIWSAVSHKLSSLQFDVHRKNRYRRSEMFDRN
FT                   GSS"
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SQ   Sequence 1386 BP; 396 A; 245 C; 310 G; 435 T; 0 other;
     atgataaaaa tgtcggaaaa gagtttgctt tcttcaaaat tcctctttta cacgataact        60
     gtttcaacgc tactcttcat tgtctcttct ctcgtcttcc ttcaacgcca cgattcttct       120
     ttcacttcaa gtttagttcg caagctgatt cttccaagaa cagacatcaa gaacgaagaa       180
     ttcggactaa tcgatacgaa atgcgatcga gacagagatg tgttgaaggt gtttatgtac       240
     gatctaccct ctgagtttca ctttgggata ttgaattggc acaaaaaagg atctgagatt       300
     tggccaaatg tcaacaacat tagtacaatc ccatcttatc ctggtgggtt aaatcgtcaa       360
     cacagtgtag agtattggct aacacttgat ttattagctt cagagacacc tgaaatcaag       420
     agaccttgta gtagtgcagc tattagagtg aagaactcta atgaagctga tatagttttc       480
     gtgcctttct ttgcttcgtt gagttacaat cggaaatcga agctccgtgg aaacgaaaca       540
     agcagtgatg atagattgtt gcaagaaaga ttagttgagt tcttgaaaag tcaagatgag       600
     tggaaaagat ttgatgggaa agatcatttg atagtagctc accatccaaa cagtttgctc       660
     tatgcaagaa actttcttgg atcagcaatg tttgttcttt cggatttcgg aaggtattcg       720
     tctgctatcg ccaatcttga gaaagatatc attgcgcctt acgtgcacgt cgttaagact       780
     atctctaaca acgagtcagc ttcgtttgag aagcgtcctg tattggcata tttccaagga       840
     gctatctata gaaaagatgg tggaactatt cgtcaagaac tgtataacct tctgaaagat       900
     gagaaagatg ttcactttgc atttggaact gttagaggaa atgggactaa acaaactggt       960
     aaaggaatgg cttcctcgaa gttttgtctc aatatcgcgg gtgacactcc ttcctctaac      1020
     cgtcttttcg atgccattgt gagccattgt gttccggtta taatcagtga tcagattgag      1080
     cttccatttg aagatactct tgattattcg ggtttctccg tgtttgtgca tgcttctgaa      1140
     gctgtaaaga aagagttctt ggtgaatatt ctcagaggga taacagagga tcagtggaag      1200
     aagaagtggg ggagattgaa agaggttgct gggtgttttg agtatcgctt tccttcgcaa      1260
     gttggagatt ctgtgaatat gatttggtca gcggtttcgc ataagctttc ttcacttcag      1320
     tttgatgttc atagaaagaa tcgctaccgt agatctgaaa tgtttgatag aaacggttcg      1380
     agttaa                                                                 1386
//
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