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EBI Dbfetch

ID   BT002373; SV 1; linear; mRNA; STD; PLN; 1660 BP.
XX
AC   BT002373;
XX
DT   17-DEC-2002 (Rel. 74, Created)
DT   17-DEC-2002 (Rel. 74, Last updated, Version 1)
XX
DE   Arabidopsis thaliana clone U19315 unknown protein (At4g16745) mRNA,
DE   complete cds.
XX
KW   FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1660
RA   Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA   Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G.,
RA   Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J.,
RA   Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J.,
RA   Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T.,
RA   Shinozaki K., Davis R.W., Ecker J.R., Theologis A.;
RT   "Arabidopsis Open Reading Frame (ORF) Clones";
RL   Unpublished.
XX
RN   [2]
RP   1-1660
RA   Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA   Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G.,
RA   Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J.,
RA   Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J.,
RA   Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T.,
RA   Shinozaki K., Davis R.W., Ecker J.R., Theologis A.;
RT   ;
RL   Submitted (15-DEC-2002) to the EMBL/GenBank/DDBJ databases.
RL   Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
XX
CC   The RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length  cDNA'): Seki,M., Narusaka,M.,  Ishida,J.,
CC    Satou,M.,  Kamiya,A., Sakurai,T., Carninci,P.,  Kawai, J.,
CC   Hayashizaki,Y.  and  Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members constructed and
CC   sequenced the pUNI (ORF) clones using the RAFL cDNAs: Yamada,K.,
CC   Chan,M.M., Chang,C.H., Dale,J.M., Hsuan,V.W., Lee,J.M.,
CC   Onodera,C.S.,  Quach,H.L., Tang,C.C., Toriumi,M., Wong,C., Wu,H.C.,
CC    Yu,G., Yuan,S., Chen,H., Cheuk,R., Jones,T., Kim,C.J., Nguyen,M.,
CC   Palm,C.J., Shinn,P., Southwick,A., Tripp,M.G., Wu,T., Davis,R.W.,
CC   Ecker,J.R. and Theologis,A.
CC   Yamada,K. (SSP/PGEC) and Seki, M. (RIKEN GSC) contributed equally
CC   to  this work.  Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP
CC   /PGEC)  contributed equally to this work as PIs.
CC   Annotation based on July 2002 version of the Arabidopsis genome
CC   submitted to Genbank.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1660
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /mol_type="mRNA"
FT                   /clone="U19315"
FT                   /note="This clone is in pUNI 51. ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1629
FT                   /codon_start=1
FT                   /gene="At4g16745"
FT                   /product="unknown protein"
FT                   /db_xref="GOA:Q8RXU2"
FT                   /db_xref="InterPro:IPR004263"
FT                   /db_xref="UniProtKB/TrEMBL:Q8RXU2"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAN86206.1"
FT                   /translation="MVNIKSPLRLFIEESIKELIRGFRRQRIKWRNAFLLGSIMTTIVV
FT                   LLHTPTFSVFSDEEETESSSSSPIYLNGSLHLNIHIVSSEAKVENFHTLRTRTPIVQLN
FT                   ASEASEAVLSRKRRKRKKRKKTKDDLILTDPPPAPRHVLSSSERRALSLPPKKALTYAK
FT                   LEIQRAPEVINDTDLFAPLFRNLSVFKRSYELMELILKVYIYPDGDKPIFHEPHLNGIY
FT                   ASEGWFMKLMESNKQFVTKNPERAHLFYMPYSVKQLQKSIFVPGSHNIKPLSIFLRDYV
FT                   NMLSIKYPFWNRTHGSDHFLVACHDWGPYTVNEHPELKRNAIKALCNADLSDGIFVPGK
FT                   DVSLPETSIRNAGRPLRNIGNGNRVSQRPILAFFAGNLHGRVRPKLLKHWRNKDEDMKI
FT                   YGPLPHNVARKMTYVQHMKSSKYCLCPMGYEVNSPRIVEAIYYECVPVVIADNFMLPFS
FT                   DVLDWSAFSVVVPEKEIPRLKEILLEIPMRRYLKMQSNVKMVQRHFLWSPKPRKYDVFH
FT                   MILHSIWFNLLNQNQTSFDDHIPDS"
FT   3'UTR           1630..1660
FT                   /gene="At4g16745"
XX
SQ   Sequence 1660 BP; 502 A; 361 C; 329 G; 468 T; 0 other;
     atggtgaata ttaaaagccc tttacggcta ttcatagagg agtcgattaa ggaattaatt        60
     aggggtttca ggagacaaag gatcaaatgg agaaatgcgt ttcttcttgg ttctataatg       120
     actaccattg ttgttctgct tcatacacca acgttttcag tcttctctga tgaagaagaa       180
     accgagtctt cttcttcttc gcctatttac ttgaatggtt ctctgcattt gaatatccat       240
     attgttagta gtgaagcaaa agttgaaaat tttcatactc ttagaacaag aactcctatt       300
     gtgcaattga atgcttctga agcaagtgaa gctgttcttt cgagaaaaag gcgaaaaagg       360
     aagaaaagaa agaagacaaa agatgatctg attctcactg atcctccacc agcaccacga       420
     catgttctat cttcctcaga gagacgtgct ctttccttgc caccgaagaa agctcttact       480
     tatgcaaaac tggagattca gcgtgccccg gaggtcataa atgatacaga tctgtttgcc       540
     ccattgtttc gaaatctctc tgttttcaaa aggagctatg agcttatgga actaatacta       600
     aaggtctaca tatatcctga cggagacaaa cccatcttcc acgaaccgca tttaaatggt       660
     atatatgctt cagaaggttg gtttatgaag ctaatggagt caaacaaaca gtttgtcaca       720
     aagaaccctg agagggctca cttgttctac atgccatata gtgtgaaaca gcttcagaaa       780
     agtatctttg ttcctggatc acataacatc aaacctttat cgatctttct tagagactac       840
     gtcaacatgc tctccatcaa ataccccttc tggaaccgca ctcatgggtc agatcatttc       900
     cttgtcgctt gccacgattg gggtccttac acagtgaacg agcacccaga gctaaaacga       960
     aacgctatta aagctctctg caatgcagac ttatcagatg gaatcttcgt cccggggaaa      1020
     gacgtttctc tccctgaaac atccataaga aacgcaggta gaccactacg caacatagga      1080
     aacggaaaca gagtttctca acgtcccatc ctcgctttct tcgctggaaa cctccacggt      1140
     cgtgtccgtc caaagcttct aaaacactgg agaaacaaag acgaggacat gaaaatctac      1200
     ggtccgcttc cacacaacgt agctaggaaa atgacttacg tacaacacat gaaatcaagc      1260
     aagtactgtc tttgtccaat gggttacgaa gtgaacagtc cacgtatcgt tgaagctata      1320
     tactatgaat gcgtccctgt agtgatcgct gataacttca tgttaccgtt cagcgatgtg      1380
     ctagattggt cagcgttctc agtggttgta ccggagaagg agattccacg gctgaaggag      1440
     atactattgg agattcctat gaggagatat ttgaagatgc agagtaacgt gaagatggtt      1500
     cagagacatt tcttgtggag ccctaaacct agaaagtacg atgtgtttca tatgatactt      1560
     cactccattt ggtttaacct tctcaatcaa aaccaaactt cttttgatga tcatattccc      1620
     gattcctgac atcatcctta attatgtctg tacattatat                            1660
//


  
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