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EBI DbfetchID BT002276; SV 1; linear; mRNA; STD; PLN; 1581 BP. XX AC BT002276; XX DT 21-NOV-2002 (Rel. 73, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Arabidopsis thaliana At4g23490/F16G20_190 mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-1581 RA Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., RA Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., RA Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J., RA Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., RA Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., RA Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., RA Theologis A., Ecker J.R.; RT "Arabidopsis ORF clones"; RL Unpublished. XX RN [2] RP 1-1581 RA Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., RA Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., RA Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J., RA Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., RA Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., RA Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., RA Theologis A., Ecker J.R.; RT ; RL Submitted (19-NOV-2002) to the EMBL/GenBank/DDBJ databases. RL Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology RL Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey RL Pines Road, La Jolla, CA 92037, USA XX CC The discrepancy does not affect the protein sequence. CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members constructed and CC sequenced the pUNI (ORF) clones using the RAFL cDNAs: Cheuk,R., CC Chen,H., Kim,C.J., Shinn,P., Banh,J. Bowser,L., Chan,M.M., CC Chang,E., Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G., CC Lam,B., Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S., CC Palm,C.J., Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., CC Wu,H.C., Yamada,K., Yamamura, Y., Yu,G., Davis,R.W., Theologis,A., CC and Ecker,J.R. CC Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk) CC contributed equally to this work as PIs. XX FH Key Location/Qualifiers FH FT source 1..1581 FT /organism="Arabidopsis thaliana" FT /chromosome="4" FT /mol_type="mRNA" FT /clone="U13566" FT /note="This clone is in pUNI 51 ecotype: Columbia" FT /db_xref="taxon:3702" FT CDS 1..1581 FT /codon_start=1 FT /product="At4g23490/F16G20_190" FT /note="unknown protein" FT /db_xref="InterPro:IPR006740" FT /db_xref="UniProtKB/TrEMBL:Q8H0S2" FT /protein_id="AAN72287.1" FT /translation="MKGNQKDSSEKPIWDRSSSSTSIPGMWSLTRPGPKLMVWLICFIV FT FTYIIYMLKLVSTSRSCDDSTSFTTVSALSTNVSSNVSSLSTSLASRRRNWEEEEEDTV FT VDKLTDLNHVVFGIAASSKLWKQRKEYIKIWYKPKRMRGYVWLDKEVKKSLSDDDDEKL FT LPPVKISGGTASFPYTNKQGQRSALRISRIVSETLRLGPKNVRWFVMGDDDTVFVIDNL FT IRVLRKYDHEQMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQR FT YPALYGSDDRMQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPVTPFVSMHHLDVVE FT PIFPNMTRVRALKKITEPMKLDSAGLLQQSICYDKHKSWTISVSWGYAVQIFRGIFSPR FT EMEMPSRTFLNWYKRADYTAYAFNTRPVSRNPCQKPFVFYMSSTKFDQQLNTTVSEYTI FT HRVSHPSCRWKMTNPAEINTIVVYKKPDPHLWERSPRRNCCRVLQTKRNNTLWINVGVC FT RAGEVTEVK" FT misc_difference 413 FT /replace="a" FT /note="compared to genome" XX SQ Sequence 1581 BP; 423 A; 346 C; 377 G; 435 T; 0 other; atgaaaggaa accagaaaga ctcgtcggaa aaaccgatat gggatcggag ctcatcaagt 60 acatctatac ccggaatgtg gtctttaacc cgacccggtc caaaacttat ggtttggctt 120 atctgtttca ttgtcttcac ttacattatc tacatgctta agcttgtctc tacctcacgc 180 tcctgtgacg attccacttc tttcaccacc gtctctgctc tctccacaaa cgtctcttca 240 aatgtctcgt ctttatccac ctccttagct tcacggcggc gtaattggga ggaggaagaa 300 gaagacacgg tggtggataa gctgacggat cttaaccacg tggtgtttgg gatcgctgcg 360 tcgtctaagc tatggaaaca gaggaaagag tatatcaaga tctggtataa accaaaacgc 420 atgcgtggct acgtttggtt agataaagag gttaaaaaga gtcttagtga tgatgatgac 480 gaaaagcttc ttcctccggt gaaaatctcc ggtggaactg cttcgtttcc ttatactaac 540 aaacaaggac aacgctctgc gttacggatc tcgaggattg tttctgaaac gctgcgttta 600 ggtccgaaga atgttaggtg gtttgtgatg ggtgatgatg atacggtgtt tgttattgat 660 aatttgatta gggtgttgag gaagtatgac catgagcaga tgtattacat tgggagcttg 720 tcggaatctc atttacagaa catatttttc tcgtatggta tggcttatgg tggaggtgga 780 tttgctataa gctatccatt ggctaaagct ttgagtaaga tgcaagatcg gtgtatacag 840 aggtatcctg cattgtatgg atcagatgat cgcatgcaag cttgtatggc tgaacttggt 900 gttccactca ctaaagaact cggatttcac cagtacgacg tttacgggaa cctctttggc 960 cttctcgctg cacacccagt aacaccgttc gtctcgatgc accacctcga cgtggtggaa 1020 ccgattttcc ctaacatgac acgtgtccgc gccctcaaga agattaccga acctatgaag 1080 cttgactcag ccgggcttct ccagcagtcg atatgctacg acaagcacaa gagctggacc 1140 atctcggtct cttggggcta cgcggttcag atttttcgcg gaatattctc tccccgagaa 1200 atggaaatgc cttctagaac cttcttgaat tggtacaaac gggcggatta cactgcttac 1260 gctttcaaca ctaggccggt tagccggaac ccgtgtcaaa aaccgtttgt gttttacatg 1320 tcgagcacga aattcgatca gcagctgaac acgacggtta gcgaatacac gatacaccgt 1380 gtttcacatc cttcttgccg atggaagatg acaaacccag ctgagattaa taccatcgtc 1440 gtctacaaga aacccgaccc tcatctatgg gaaaggtcac ctaggaggaa ttgttgcaga 1500 gtattacaaa caaagaggaa taatacgtta tggatcaatg ttggtgtatg tagagcaggt 1560 gaagtcactg aagttaagta a 1581 // |
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