EBI Dbfetch

ID   BT001909; SV 1; linear; mRNA; STD; PLN; 1486 BP.
XX
AC   BT001909;
XX
DT   30-NOV-2002 (Rel. 73, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 3)
XX
DE   Arabidopsis thaliana clone C105465 putative beta-amylase (At5g55700) mRNA,
DE   complete cds.
XX
KW   FLI_CDNA.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1486
RA   Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA   Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G.,
RA   Yuan S., Chen H., Cheuk R., Jones T., Kim C.J., Nguyen M., Palm C.J.,
RA   Shinn P., Southwick A., Tripp M.G., Wu T., Davis R.W., Ecker J.R.,
RA   Theologis A.;
RT   "Arabidopsis Open Reading Frame (ORF) Clones";
RL   Unpublished.
XX
RN   [2]
RP   1-1486
RA   Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA   Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G.,
RA   Yuan S., Chen H., Cheuk R., Jones T., Kim C.J., Nguyen M., Palm C.J.,
RA   Shinn P., Southwick A., Tripp M.G., Wu T., Davis R.W., Ecker J.R.,
RA   Theologis A.;
RT   ;
RL   Submitted (18-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
XX
CC   Annotation based on July 2002 version of the Arabidopsis genome
CC   submitted to Genbank.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1486
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /mol_type="mRNA"
FT                   /clone="C105465"
FT                   /note="This clone is in pUNI 51. ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1455
FT                   /codon_start=1
FT                   /gene="At5g55700"
FT                   /product="putative beta-amylase"
FT                   /db_xref="GOA:Q94AS2"
FT                   /db_xref="HSSP:1B1Y"
FT                   /db_xref="InterPro:IPR001371"
FT                   /db_xref="InterPro:IPR001554"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/TrEMBL:Q94AS2"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAN71908.1"
FT                   /translation="MIPPFKRGRFITKLRSVAGNSRIFSMDAREKSRSFVLVSSRHKRV
FT                   PVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEF
FT                   KWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDK
FT                   SGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGE
FT                   LRYPAHPSGDGRWKFPGIGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFP
FT                   SGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVA
FT                   KIGGIYWWYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPE
FT                   KYLCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFC
FT                   RMNEKIFRVENWNNFVPFIRQMSADM"
FT   3'UTR           1456..1486
FT                   /gene="At5g55700"
FT   misc_difference 1466
FT                   /gene="At5g55700"
FT                   /replace="c"
FT                   /note="compared to genomic sequence"
XX
SQ   Sequence 1486 BP; 399 A; 277 C; 370 G; 440 T; 0 other;
     atgattcctc ctttcaaacg cggtcgtttc atcactaagt tgcgttccgt cgccgggaac        60
     agccgaatct ttagcatgga tgctcgagag aaatcacgat cgtttgtgtt ggtatcatca       120
     aggcacaaga gagttccagt ttttgtgatg atgccgattg atacatttgg aattgatgct       180
     tctgggtgtc caaagattaa aaggctcaag gctttaactg tatctcttaa ggcactcaag       240
     ttagctggtg ttcatggaat cgcagttgag gtttggtggg ggattgtaga gcgtttctct       300
     cctcttgagt ttaaatggtc actgtatgaa gagcttttta gactgatttc tgaggcaggg       360
     ttgaagttac atgttgctct ttgctttcat tcaaatatgc atttgtttgg tgggaaagga       420
     ggcatcagtc ttccactctg gatccgagag attggagacg tcaataagga catatactat       480
     agagataaaa gcggattttc caacaatgac tatctcacac ttggagtcga tcaacttcct       540
     ttgttcggtg gccgtactgc tgttcaatgc tatgaagatt ttatgctcag tttttcaaca       600
     aaatttgagc catatcttgg gaatgtgatt gaagaaataa gtataggtct tggtccttcg       660
     ggggagctta gatatcctgc acatccttct ggagatggga ggtggaaatt tcctggaatt       720
     ggtgaattcc aatgccatga caagtacatg atggaagact tgatggcagt ggcatcccaa       780
     gaaggcaaac ctcaatgggg aagcagagat cctccgaata ccggctgcta taatagcttt       840
     ccatctggag ttccgttctt tgaggagggc aatgatagct ttctctctga ctatggtcgt       900
     ttctttctag aatggtacag tgggaagttg atttgtcatg ctgatgctat tcttgcaaag       960
     gcagccgatg tcttgcggag acgtcaggaa gaagagaaaa gctctgtaat gctggttgca      1020
     aaaattggtg gaatctattg gtggtataag acatcttcac accccgctga actaactgca      1080
     ggttattaca acacctccct cagggatggt tatgatcctg tagcttccgt cttgtctcgt      1140
     catggtgctg ctctcaacat cccctgcttg gatatggcag atagtgaaat acctgagaaa      1200
     tatctttgca gccctgaagg attacgtaga cagatacatg atgtttcgaa gaagtggaca      1260
     atacatgtga ctggtagaaa cacaagcgaa agatttgatg agatgggact aaggcaaata      1320
     cgagagaact gtgtgcaacc gaatggcgac actctaagat catttacgtt ttgcagaatg      1380
     aatgagaaga tctttagggt cgagaactgg aacaactttg tccctttcat tagacagatg      1440
     agtgcagata tgtaaacaca ctcacaaccc attggtgtgt ttgtct                     1486
//