 |
|
EBI DbfetchID BT001727; SV 1; linear; mRNA; STD; INV; 3426 BP. XX AC BT001727; XX DT 18-NOV-2002 (Rel. 73, Created) DT 18-NOV-2002 (Rel. 73, Last updated, Version 1) XX DE Drosophila melanogaster RE69909 full insert cDNA. XX KW FLI_CDNA. XX OS Drosophila melanogaster (fruit fly) OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; OC Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; OC Drosophilidae; Drosophila; Sophophora. XX RN [1] RP 1-3426 RA Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., RA Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., RA Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A., RA Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., RA Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.; RT ; RL Submitted (15-NOV-2002) to the EMBL/GenBank/DDBJ databases. RL Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, RL One Cyclotron Road, Berkeley, CA 94720, USA XX CC Sequence submitted by: CC Berkeley Drosophila Genome Project CC Lawrence Berkeley National Laboratory CC Berkeley, CA 94720 CC This clone was sequenced as part of a high-throughput process to CC sequence clones from Drosophila Gene Collection 1 (Rubin et al., CC Science 2000). The sequence has been subjected to integrity checks CC for sequence accuracy, presence of a polyA tail and contiguity CC within 100 kb in the genome. Thus we believe the sequence to CC reflect accurately this particular cDNA clone. However, there are CC artifacts associated with the generation of cDNA clones that may CC have not been detected in our initial analyses such as internal CC priming, priming from contaminating genomic DNA, retained introns CC due to reverse transcription of unspliced precursor RNAs, and CC reverse transcriptase errors that result in single base changes. CC For further information about this sequence, including its location CC and relationship to other sequences, please visit our Web site CC (http://fruitfly.berkeley.edu) or send email to CC cdna@fruitfly.berkeley.edu. XX FH Key Location/Qualifiers FH FT source 1..3426 FT /organism="Drosophila melanogaster" FT /strain="y; cn bw sp" FT /mol_type="mRNA" FT /db_xref="taxon:7227" FT CDS 144..3203 FT /codon_start=1 FT /gene="CG5871" FT /product="RE69909p" FT /note="Longest ORF" FT /db_xref="FLYBASE:FBgn0038870" FT /db_xref="GOA:Q9VDC9" FT /db_xref="InterPro:IPR011496" FT /db_xref="UniProtKB/TrEMBL:Q9VDC9" FT /protein_id="AAN71482.1" FT /translation="MADEAGSQADGKRQFICGVIEGFYGRPWTTEQRKDLFRKLKSMGM FT GSSPSYMYAPKDDYKHRAYWRELYTVEEADHLSSLIAAAKEAGITFYYALSPGLDMTYS FT SPKEIATLKRKLDQVAQFGCEAYALLFDDIESELSKADKEVFQTFANAHVSVTNEIYTH FT LGSPRFLFCPTQYCASRAVPTVQESEYLNTLGSKLNNEIDILWTGDKVISKNISLESIQ FT EITEVLRRPPCIWDNLHANDYDQKRIFMGPYSGRSPELIPHLRGVMTNPNCEFYGNFVA FT IHSLAFWSRCSLDSKVNSSLSADIKLETENDDDLPAEFLSKNVYHPRLALKNAITEWLP FT EFFMKKEAWGPITKPQPQVQMVMPIIPIIPSINTCMSLTTTTTTSTSSRTVPPTVNTTQ FT LQALADVCVVTSSLTPISNPVMNSLVSPTKVITNDDIINPIPTTAASNIELPKKIPISV FT VPVPIMETKSVEASVELALDNAVFDDNEIEPNSDSVKERLELEVNLEGKQEPVANLSVD FT TMLDDDSLSPLSGVVNEPMECSSSITSQVSPREEEAIKVVADDVLMESVNDVHSMHVES FT GTSSPISNAEMREETEAQSDRTNDNNTIEGEGITVDDLVLLCDLFYLPFEHGSRGHKLL FT VEFNWLKGNANVILQDRSAGGGGDAIKSDKPEVSEWHQRREQFDQLCSAVVELLIKIAN FT CPNKEICHELYSYMWDISGALSLLNCYVKWLALGHFPQNTSSYTEGSYTWFSKGWKEAF FT MSGDQEPWVFRGGLIADLQRLMPVDSGNDLFVYKLPEQPTANYYLLRPYCNSDEQQVND FT LCTRLYLQWRGELDGGRHIPFPLPANVPNIVADGLIGGYLTLSPQLCIVAYDESNRIIG FT YSCAALDVNIFRRNLELCWYTELREKYSRDICPLEGGEEVVQLVTSLVESYHDSSGNGA FT LDQCPVEVSGSFPAVLISGTLREAEERDSGITKRMLTVLLAALRANGCFGAHVRVPQQD FT VAQVNFYSRIGFVDVYREEATKCIYMGRRF" XX SQ Sequence 3426 BP; 840 A; 909 C; 903 G; 774 T; 0 other; agtatatcga tgtcttgagc tatcgatagc acaaggtgca attgtccgaa ccaaacgata 60 tacaaatcct gagaagagag gagaaaagaa agacttattt ggtcctcgca aattgccaca 120 tccgattccc cggcctacta gaaatggcag acgaagcggg cagccaagcc gatggcaagc 180 ggcagtttat ctgcggcgtg atcgagggat tctacggccg gccgtggacc acggagcagc 240 gcaaggacct gttccgcaag ctgaaatcca tgggcatggg gtccagtcct tcgtacatgt 300 acgcaccaaa ggacgactac aagcaccgcg cctactggcg agagctatac accgttgagg 360 aggcggatca cctttccagt ctcattgcag cggccaagga ggcgggcatc accttttact 420 acgcgttatc gcccgggctg gacatgacct acagcagccc caaggagatc gcaacgttga 480 agcgcaagct ggaccaggtt gcgcagtttg ggtgtgaggc ctacgccctg ctctttgacg 540 acatcgagtc ggagctctca aaggcggaca aggaggtctt tcagacgttt gctaacgcgc 600 acgtgtcggt gaccaacgag atatacacgc atctgggcag ccccaggttt ctcttctgcc 660 ccacccagta ctgtgcctcg cgagcggtgc caacggtcca ggaatcggag tacctcaata 720 ccctgggctc caagctgaac aacgagatcg atattttgtg gacgggggat aaggttatct 780 ccaagaacat atcccttgag tcgattcaag agattaccga ggtgctgcgc cgtccgccgt 840 gcatctggga caatcttcat gccaacgact acgaccagaa gcgaatcttc atgggaccgt 900 acagcggtcg atcgccggag cttattcccc acctgcgtgg tgttatgacc aatcccaact 960 gcgaattcta tggcaatttt gttgccatcc attcgctggc cttctggtcg cgctgcagcc 1020 tggactcgaa agtgaacagc tcgctaagtg cagacataaa actggagact gaaaacgatg 1080 atgacctacc ggcggagttt ctctctaaga acgtttacca cccacgcttg gctctcaaaa 1140 acgctataac ggagtggcta ccggagttct tcatgaaaaa ggaggcctgg ggaccgatca 1200 ccaagcccca gcctcaagtc caaatggtga tgcccattat tcccatcata ccctccataa 1260 atacctgcat gagtctcacc accaccacaa ccacatcgac gagctccagg acggttccac 1320 ccacggtcaa caccactcaa cttcaagctc tggctgacgt ttgcgttgtt acctcttccc 1380 tgactcctat ctcaaatcca gtaatgaact ccctggtctc acccacaaaa gtgatcacga 1440 acgatgacat catcaatccc attccgacca cagcggccag caacattgaa ctacccaaga 1500 aaataccgat ctccgttgtc ccagtgccca ttatggagac aaagagtgtg gaggcttccg 1560 tggaactggc tttggacaat gcggttttcg atgacaatga aattgagccc aatagtgatt 1620 ccgtgaagga gcggctagag ctggaggtga acctagaggg gaagcaggaa ccggtggcca 1680 atcttagtgt ggacacaatg ctggacgatg acagtcttag tcccctaagt ggcgtagtca 1740 atgagccaat ggagtgcagc agcagtatca catcacaggt ctctccaagg gaggaggagg 1800 ccattaaagt ggtggccgac gatgttctca tggagtccgt taacgatgtg catagtatgc 1860 atgtggagag tgggacttcg tcgccgatct caaatgcgga aatgcgcgag gaaactgaag 1920 ctcagtctga taggactaac gataataata ccatcgaagg cgaaggaata accgttgacg 1980 atttggttct tctctgcgac ctgttctatc tgcccttcga acatggcagt cgcggccaca 2040 agctgctcgt ggaattcaac tggctgaagg gcaacgctaa tgtgatactg caggaccggt 2100 ctgccggcgg cggaggcgat gcaattaaat cagacaagcc ggaggttagc gagtggcacc 2160 agcgtcgcga gcagttcgac caactctgca gtgctgtagt agagctccta attaagatcg 2220 ccaattgccc gaacaaggag atttgccacg agctgtactc gtatatgtgg gacatctccg 2280 gcgccctatc tctgctcaat tgctatgtta agtggctggc tctcggccat ttcccgcaaa 2340 atacgtcttc ctacacagag ggcagctaca catggtttag caagggctgg aaggaggcgt 2400 tcatgtctgg tgatcaggag ccgtgggtct ttagaggcgg cctcattgcc gacctgcaac 2460 gcctgatgcc tgtggactcg ggcaacgacc tgttcgtgta caagcttccg gaacagccca 2520 cggccaacta ctatctcttg agaccttact gcaattcgga cgaacagcaa gtcaacgatt 2580 tgtgcactcg cctgtatttg cagtggcggg gagagctgga cggaggcagg cacattccgt 2640 tcccgctgcc ggcgaatgtg ccaaacattg tggcggatgg gctgatcggt ggatatctca 2700 ccctcagtcc gcaactgtgc attgtggcct acgacgagag taaccgtatc attggatatt 2760 catgcgccgc cctggatgtc aacatatttc gacgcaacct ggagctgtgc tggtacacgg 2820 aactgcgtga gaagtactct agagatattt gtccactgga gggtggcgag gaggttgtac 2880 agctcgtcac ctcccttgtg gagagttatc atgacagcag cggtaacggg gctctggacc 2940 agtgtcccgt agaggtgagc ggctccttcc ctgccgtgtt gatctccgga actttgcgcg 3000 aagcggagga gcgcgactcg ggaataacca agcggatgct caccgtactt ctggccgccc 3060 tgcgtgcgaa cggctgcttt ggtgctcacg ttcgcgttcc gcaacaagat gtcgcccagg 3120 tgaactttta ttccagaatc ggtttcgtgg atgtctatcg cgaggaggcc accaagtgta 3180 tttacatggg tcgccgtttc tagcgtagct ggttgccacc ttcactgcct ccacttttaa 3240 tgttccttca tctttggtat tccggctagc ggtgctagct actcacgtca tgtcctcgtc 3300 ctttttgtat tcccttgagg tataaagttt gtataactga ccaacccttc cagcatttat 3360 cgtaagcatt gttttcttac tgagaaaaac aataaaaata ccaatttaac aaaaaaaaaa 3420 aaaaaa 3426 // |
|