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EBI DbfetchID BT000643; SV 1; linear; mRNA; STD; PLN; 2664 BP. XX AC BT000643; XX DT 24-OCT-2002 (Rel. 73, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Arabidopsis thaliana putative alpha-amylase (At1g69830/T17F3_14) mRNA, DE complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-2664 RA Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Chan M.M., RA Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Ishida J., RA Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J., RA Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., RA Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., RA Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Davis R.W., Theologis A., RA Ecker J.R.; RT "Arabidopsis ORF clones"; RL Unpublished. XX RN [2] RP 1-2664 RA Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Chan M.M., RA Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Ishida J., RA Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J., RA Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., RA Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., RA Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Davis R.W., Theologis A., RA Ecker J.R.; RT ; RL Submitted (25-SEP-2002) to the EMBL/GenBank/DDBJ databases. RL Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology RL Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey RL Pines Road, La Jolla, CA 92037, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members constructed and CC sequenced the pUNI (ORF) clones using the RAFL cDNAs: Kim,C.J., CC Chen,H., Cheuk,R., Shinn,P., Bowser,L., Chan, M.M., Chang,C.M., CC Dale,J.M., Deng,J.M., Hsuan,V.W., Jones,T., Karlin-Neumann,G., CC Lam,B., Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Palm,C.J., CC Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wallender,E.K., CC Wong,C., Wu,H.C., Yamada,K., Yu,G., Yuan,S., Davis,R.W., CC Theologis,A., and Ecker,J.R. CC Kim,C.J. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk) CC contributed equally to this work as PIs. XX FH Key Location/Qualifiers FH FT source 1..2664 FT /organism="Arabidopsis thaliana" FT /chromosome="1" FT /mol_type="mRNA" FT /clone="U13168" FT /note="This clone is in pUNI 51 ecotype: Columbia" FT /db_xref="taxon:3702" FT CDS 1..2664 FT /codon_start=1 FT /product="At1g69830/T17F3_14" FT /note="putative alpha-amylase" FT /db_xref="GOA:Q94A41" FT /db_xref="HSSP:1P6W" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/TrEMBL:Q94A41" FT /protein_id="AAN18209.1" FT /translation="MSTVPIESLLHHSYLRHNSKVNRGNRSFIPISLNLRSHFTSNKLL FT HSIGKSVGVSSMNKSPVAIRATSSDTAVVETAQSDDVIFKEIFPVQRIEKAEGKIYVRL FT KEVKEKNWELSVGCSIPGKWILHWGVSYVGDTGSEWDQPPEDMRPPGSIAIKDYAIETP FT LKKLSEGDSFFEVAINLNLESSVAALNFVLKDEETGAWYQHKGRDFKVPLVDDVPDNGN FT LIGAKKGFGALGQLSNIPLKQDKSSAETDSIEERKGLQEFYEEMPISKRVADDNSVSVT FT ARKCPETSKNIVSIETDLPGDVTVHWGVCKNGTKKWEIPSEPYPEETSLFKNKALRTRL FT QRKDDGNGSFGLFSLDGKLEGLCFVLKLNENTWLNYRGEDFYVPFLTSSSSPVETEAAQ FT VSKPKRKTDKEVSASGFTKEIITEIRNLAIDISSHKNQKTNVKEVQENILQEIEKLAAE FT AYSIFRSTTPAFSEEGVLEAEADKPDIKISSGTGSGFEILCQGFNWESNKSGRWYLELQ FT EKADELASLGFTVLWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDTVKKFHKVGIK FT VLGDAVLNHRCAHFKNQNGVWNLFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPN FT IDHSQDFVRKDIKEWLCWMMEEVGYDGWRLDFVRGFWGGYVKDYMDASKPYFAVGEYWD FT SLSYTYGEMDYNQDAHRQRIVDWINATSGAAGAFDVTTKGILHTALQKCEYWRLSDPKG FT KPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPEGKEMQGYAYILTHPGTPAVFFDHIFS FT DYHSEIAALLSLRNRQKLHCRSEVNIDKSERDVYAAIIDEKVAMKIGPGHYEPPNGSQN FT WSVAVEGRDYKVWETS" XX SQ Sequence 2664 BP; 822 A; 497 C; 646 G; 699 T; 0 other; atgtccactg ttcccattga gtctcttctc caccattctt atcttcgtca caactcaaaa 60 gtcaatcgcg gaaatagaag cttcatacct atctcgttga atctccgttc tcatttcact 120 tctaacaaac tactacactc aattggaaaa agtgtcggtg ttagctcgat gaacaaaagt 180 cccgtcgcca ttcgtgctac ctcatcggat actgccgtcg tggaaaccgc tcaatcggat 240 gatgtcatct tcaaggaaat tttccctgtt cagcgaatcg aaaaggcaga aggaaagatt 300 tatgttcgat taaaggaagt gaaggagaag aattgggagc tgagtgttgg atgtagtata 360 cctggaaaat ggattttgca ttggggagtt tcatatgtgg gtgatactgg cagtgaatgg 420 gatcaacctc cggaagatat gagacctcct ggctcaattg ccattaagga ctatgccata 480 gagacacctt tgaagaagtt atctgaagga gattcttttt ttgaagttgc tattaatcta 540 aatctggaga gttctgtagc agctctcaat tttgttttga aggacgaaga aactggggcg 600 tggtatcagc acaaagggag agactttaag gttcctcttg tagacgatgt tcctgataat 660 ggaaatttga tcggagctaa gaaaggattt ggtgcccttg ggcagctttc aaacatccct 720 ctcaaacaag ataagtccag tgcagagact gattctattg aagaaagaaa aggtcttcaa 780 gagttttacg aggagatgcc aataagtaaa cgtgttgccg atgataactc agtcagtgtc 840 actgcaagga aatgccctga aacatctaag aacattgtat caattgaaac cgatttaccg 900 ggtgacgtta ctgtccactg gggagtttgc aaaaacggca ctaagaaatg ggaaattcca 960 tctgaacctt accctgaaga gacatctttg tttaagaaca aggcattacg cactcgttta 1020 cagcgaaaag acgatggaaa tggatcgttt ggattattct ctctggatgg aaagcttgaa 1080 gggttatgct ttgttcttaa gttaaatgaa aatacttggc taaattatag gggggaagac 1140 ttctatgtcc ctttccttac ttcaagtagc tcgcccgttg aaactgaagc tgcccaagtg 1200 agtaaaccca aacgaaaaac agataaagaa gtgtctgcta gtggatttac taaagaaatc 1260 atcacggaga taaggaactt ggcaattgac atttcctctc ataagaatca gaagacaaac 1320 gtcaaagaag tgcaggaaaa cattctacaa gaaattgaga aactggctgc ggaggcatat 1380 agcatattta gaagcacaac tccagctttt tccgaggaag gtgttttaga agcagaagct 1440 gacaagcctg acattaaaat ctcctcagga accggctcgg gatttgagat attatgccaa 1500 ggtttcaact gggagtccaa taaatctggg agatggtact tggaacttca agaaaaagcc 1560 gatgagttag cttcacttgg attcactgtt ctgtggttac ctccaccgac agaatctgtg 1620 tcacctgaag ggtacatgcc taaagacctg tataacttga attccagata tggaacaatt 1680 gatgagctaa aagatacagt gaagaaattt cacaaggtcg ggatcaaagt tttaggcgat 1740 gctgttctga atcaccgctg tgcacacttc aaaaatcaaa atggtgtatg gaatctattt 1800 ggaggacgtc taaactggga cgatagggca gtagttgcag atgaccctca tttccagggt 1860 agaggaaaca agagcagtgg agataatttc catgctgctc caaacataga tcactcgcaa 1920 gactttgtta ggaaggatat caaggaatgg ctatgctgga tgatggaaga agttgggtat 1980 gatggatgga ggcttgactt tgtaagaggg ttctggggag gttatgtgaa agactatatg 2040 gatgctagca aaccgtactt tgcggttggt gaatattggg attcgttaag ttacacgtac 2100 ggagaaatgg actacaatca agacgcacat cgtcaaagaa tagttgactg gattaatgca 2160 actagtggag ctgctggtgc atttgatgtc actaccaaag gaattcttca tacggcgctt 2220 caaaaatgtg aatattggag actctcagac ccaaaaggga agcctccagg tgtagttggt 2280 tggtggcctt ctcgtgctgt aacattcatc gagaatcatg acactggctc tacacagggt 2340 cattggagat ttccggaggg gaaggaaatg caaggatatg cttacatcct aactcatcca 2400 ggaacaccag cggtcttctt cgaccatatc ttctcggatt atcattccga gattgctgca 2460 cttctctctc tcaggaacag acagaaactc cactgtcgga gtgaggtgaa tatagacaag 2520 agtgagagag atgtgtatgc ggctataata gatgaaaagg ttgcaatgaa gatcggacca 2580 gggcattatg aaccaccaaa cggatcgcaa aactggtctg tagccgttga aggcagagac 2640 tacaaggtgt gggaaacatc ttaa 2664 // |
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