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EBI DbfetchID BC166748; SV 1; linear; mRNA; STD; ROD; 2877 BP. XX AC BC166748; XX DT 06-MAY-2008 (Rel. 95, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 2) XX DE Rattus norvegicus exostoses (multiple) 2, mRNA (cDNA clone MGC:188484 DE IMAGE:5599208), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-2877 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2877 RG NIH MGC Project RA ; RT ; RL Submitted (03-MAY-2008) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSRNOG00000008944; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000012161; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000065982; Rattus_norvegicus. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Jeff Green/Paturu Kondaiah, NCI. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 337 Row: a Column: 13 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 157820410. XX FH Key Location/Qualifiers FH FT source 1..2877 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NCI_CGAP_Pr50" FT /clone="MGC:188484 IMAGE:5599208" FT /tissue_type="Prostate, pool of NCI_CGAP_Pr30, 40, 41 and FT NCI_CGAP_Pr29, 39, 42" FT /note="Vector: pCMV-SPORT6.1" FT /db_xref="taxon:10116" FT gene 1..2877 FT /gene="Ext2" FT CDS 191..2347 FT /codon_start=1 FT /gene="Ext2" FT /product="Ext2 protein" FT /db_xref="GOA:B2RYE4" FT /db_xref="InterPro:IPR004263" FT /db_xref="InterPro:IPR015338" FT /db_xref="UniProtKB/TrEMBL:B2RYE4" FT /protein_id="AAI66748.1" FT /translation="MCASVKSNIRGPALIPRMKTKHRIYYVTLFSIVLLGLIATGMFQF FT WPHSIESSSDGGVEKRSIREVPVVRLTADSPIPERGDLSCRMHTCFDVYRCGFNPKNKI FT KVYIYPLKKYVDDAGVPVSSAISREYNELLTAISDSDYYTDDISRACLFVPSIDVLNQN FT PLRIKETAQALAQLPRWDRGTNHLLFNMLPGGPPDYNTALDVPRDRALLAGGGFSTWTY FT RQGYDVSIPVFSPLSAEVALPEKAPGSRRYFLLSSQMAIHPEYREELEALQAKHRESVL FT VLDKCTNLSEGVLSVRKRCHQHQVFDYPQVLQEATFCTVLRGARLGQAVLSDVLQAGCV FT PVVIADSYILPFSEVLDWKRASVVIPEEKMSDVYSILQNIPQRQIEEMQRQARWFWEAY FT FRSIKAIALATLQIINDRIYPYAAISYEEWNDPPAVKWASVSNPLFLPLIPPQSQGFTA FT IVLTYDRVESLFRVITEVSKVPSLSKLLVVWNNQNKNPPEESLWPKIRVPLKVVRTAEN FT KLSNRFFPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHE FT MNKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAMNFLV FT ANVTGKAVIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGTMPLKVVEH FT RADPVLYKDDFPEKLKSFPNIGSL" XX SQ Sequence 2877 BP; 673 A; 807 C; 759 G; 638 T; 0 other; ggaactggag gccggcgcag cgttccccgg ctggctctgg cttacctggt gctggcggcg 60 gcctcccgtc accgcgcgat ccgacacggc cgtggctcgc gccccgcgcc caaagccggt 120 ggcggagcgc ggggccgagc gggaggcggc cggttccgag gtgtgtgagg acgaggacat 180 ctgtgtcatt atgtgtgcgt ccgtcaagtc caacatccgg ggtcctgccc tcatcccaag 240 gatgaagacc aagcaccgga tctactacgt caccctgttc tccatcgtcc tcctgggcct 300 catcgccact ggcatgtttc agttctggcc tcactccatc gagtcctcca gcgatggggg 360 tgtggagaaa cgcagcatcc gggaagtgcc agtggtcagg ctgacagctg acagccctat 420 cccagagcgg ggggatctca gctgtagaat gcacacgtgt ttcgatgtct accgctgcgg 480 cttcaaccca aagaacaaaa tcaaggtgta catctacccc ctaaagaagt acgtggatga 540 cgccggtgtt ccggtgagca gcgccatctc ccgggagtac aatgaactgc tcacagccat 600 ctcagacagt gactactaca cagatgacat cagccgagcc tgtctgttcg tcccctccat 660 tgatgtgctg aaccagaacc cccttcgaat caaggagaca gcgcaagccc tggcccagct 720 tcccaggtgg gatcgaggga caaatcacct gctgttcaac atgttgcctg gaggtcctcc 780 agattacaac actgccctgg atgtccccag agacagggca ctgctggctg gtggcggctt 840 ttctacctgg acttaccggc agggctacga tgtcagcatt cctgttttca gcccactgtc 900 agccgaagtg gctctcccag agaaagcacc aggttcccgg cgatacttcc tgctgtcctc 960 tcagatggcc atccaccctg agtacagaga ggaactagaa gccctccagg ccaaacacag 1020 agagtccgtg ttagtcctag acaaatgcac caatctctca gagggcgtcc tttccgtccg 1080 aaagcgctgc caccagcacc aggtctttga ttacccccaa gtactgcagg aggctacttt 1140 ttgtacggtt cttcgaggag ctcggctggg ccaggcagtg ctgagcgatg tcttacaggc 1200 tggctgtgtc ccagttgtca ttgcagactc ttacattctg cctttctctg aagttctgga 1260 ctggaagagg gcatctgtgg tcattccaga ggagaagatg tcagatgtgt acagcatcct 1320 gcagaacatc ccacagaggc agattgaaga gatgcagaga caggcacgat ggttctggga 1380 ggcatacttt cggtccatta aagccatcgc cctggccacc ctacagatca tcaatgacag 1440 gatctatcca tatgcagcca tttcctatga agagtggaat gaccctcctg ctgtgaagtg 1500 ggctagtgtg agcaacccgc tcttcctccc actgatccca ccacagtcgc aaggcttcac 1560 tgccattgtc ctcacctatg accgtgtgga gagcctcttc cgggtcatca ccgaggtgtc 1620 caaggtgccc agtctgtcca agctgctggt ggtctggaat aatcagaata aaaaccctcc 1680 agaagaatct ctgtggccca aaatccgtgt tcccctgaag gttgtgagga ctgcagaaaa 1740 caagctaagt aatcgtttct tcccttacga tgaaatcgag acagaggccg tgctggccat 1800 cgatgatgat atcatcatgc tgacctctga tgagctgcag tttggttatg aggtctggcg 1860 ggaatttcct gaccggctgg tgggctaccc tggccgcctg catctctggg accacgagat 1920 gaacaagtgg aagtatgagt ctgagtggac caatgaggta tccatggtgc tcacgggtgc 1980 agccttctat cacaagtatt ttaattacct gtatacctac aaaatgcctg gggacatcaa 2040 gaactgggta gatgctcaca tgaactgtga agatattgcc atgaatttcc tagtggccaa 2100 tgtcacaggg aaagctgtca tcaaggtaac cccaagaaag aagttcaagt gtcctgagtg 2160 cacagccatc gacggactct cactagacca gactcacatg gtagagaggt ctgagtgcat 2220 caataagttt gcttccgtct tcggaacgat gcccctcaag gtggtggagc accgagcaga 2280 ccctgtactc tacaaagatg acttccctga gaaactgaag agtttcccca acatcggcag 2340 cttgtgagct caccggttcc cagggctgtg gaggagccct acaacattca cggtgggggt 2400 gaggaggcca gcctggctca gacttcccca aacacactgg agcctcttga gctatgagcc 2460 ctgctttgtc ctctcatctc cgtggactct gaaaatgcca aaggaaggga gcctcaggga 2520 caagctgcag cttggagccc agcctatcgc tcttgggttg ccaacccagc tcaccatctc 2580 actgaccctg cagctgcctc agagggtcag ctgtccagct ccagatccca ggagtcacag 2640 cagaggcatg cgattgtttc acatctgcag actctgggga aatggcaaac ctcaaacgtg 2700 ctacagatcc cagtacctct gagggttaga actgtgcttg ggacccgagt catgagccca 2760 agtacacagc agagcacagg ctgccaagat gtgtcctgac agtccctgaa caagtctttg 2820 ttttggcttt ttgatatgat taaaattatt ttttactctt ttaaaaaaaa aaaaaaa 2877 // |
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