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EBI DbfetchID BC154237; SV 1; linear; mRNA; STD; VRT; 1953 BP. XX AC BC154237; XX DT 15-OCT-2007 (Rel. 93, Created) DT 15-OCT-2007 (Rel. 93, Last updated, Version 1) XX DE Danio rerio protein phosphatase 1, regulatory (inhibitor) subunit 3B, mRNA DE (cDNA clone MGC:174129 IMAGE:8102088), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1953 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1953 RG NIH MGC Project RA ; RT ; RL Submitted (06-OCT-2007) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000044691; Danio_rerio. DR Ensembl-Gn; ENSDARG00000053065; Danio_rerio. DR Ensembl-Gn; ENSDARG00000070069; Danio_rerio. DR Ensembl-Gn; ENSDARG00000073670; Danio_rerio. DR Ensembl-Tr; ENSDART00000065670; Danio_rerio. DR Ensembl-Tr; ENSDART00000074986; Danio_rerio. DR Ensembl-Tr; ENSDART00000081030; Danio_rerio. DR Ensembl-Tr; ENSDART00000102538; Danio_rerio. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: John Postlethwait, University of Oregon CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 316 Row: i Column: 14 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 27882076. XX FH Key Location/Qualifiers FH FT source 1..1953 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_5" FT /clone="MGC:174129 IMAGE:8102088" FT /tissue_type="Ovary" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..1953 FT /gene="ppp1r3b" FT /note="synonyms: fi66d07, wu:fi66d07, fd20c10, zgc:55542, FT wu:fd20c10" FT CDS 137..1018 FT /codon_start=1 FT /gene="ppp1r3b" FT /product="protein phosphatase 1, regulatory (inhibitor) FT subunit 3B" FT /db_xref="GOA:Q803M0" FT /db_xref="InterPro:IPR005036" FT /db_xref="InterPro:IPR017434" FT /db_xref="UniProtKB/Swiss-Prot:Q803M0" FT /db_xref="ZFIN:ZDB-GENE-030131-5496" FT /protein_id="AAI54238.1" FT /translation="MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSL FT KEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSS FT LTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKS FT VKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNG FT DTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWP FT SYVGYEDIGPYY" XX SQ Sequence 1953 BP; 604 A; 363 C; 380 G; 606 T; 0 other; actcatgccc cacgaggctt ttactgagcg ttgaagctgc gttcacttac aagagacact 60 gggcttgatg aagaagtttg acctaattta aatgccgtaa cacagtgcac gtagctgccc 120 tcccaaagaa tctaccatgc ctatcgaact ggccatgtcg ctttatctgt caagcgatga 180 gttcctgaac ccaagggcat ctaaatacag caggcccttg cagccatgtc taaaccagtg 240 taaaagctcc aaacttagtt ttagctctct taaggagcag tccgagttca atggggtcag 300 cagagccttg atgatacctg gcagggccaa aaaacatgtc tcttttgctg atcacaaggg 360 cctcgctctg accgtggtga agatattctc tgaattcgat gaccccattg acatcccaga 420 caacatcgat aattttttca cctcttcgct gactgtatca gaaggaaagg acaagttaac 480 cctcgatttt gaccagccat ctgccgatta cttgaaattc cgtcaacgaa tagaaaatga 540 tcatgtctgt ctcgaacact gcatgcttaa ggagaaatct ataatgggca cagtcaaagt 600 taagaacatt tcctttgaga agtctgttaa gcttcgcatt acatttaaca cttggaagaa 660 ccacacagat gtagaatgcc agtacgtaaa ggacacttac accggctcaa accgagacac 720 tttttcattt gaagctagtt tgcctgaaca ggtgccctca catgaacgca tcgagttcgc 780 tatttgctat gaggtcaatg gtgatacact ctgggataac aaccaaggaa agaattacag 840 aatcattcag tcagcactga ggaagagttc aaatgaatct aacggtgggc atcagcaata 900 ttcccagagc gactgggaca ttcattttga ccgatatggc agccccagat gctcccgtgg 960 aatttttccc cattggccaa gctatgttgg atatgaagat atcggcccgt attattaaga 1020 atctactttt ggcgtggtct atcatgctcg cttatccata agacattgta atgaatgcca 1080 cttcaaaatg acactttaaa aaacacagca ggtttgatgt tctaatccaa gaacttgtcg 1140 gactctgaag ccatatagac tcttgagata tttattgtta ataatggatt acattgtgca 1200 acaaaatgag tcctgttttt aaaaatactg ttcctggtgc gatactaatg taattatgcg 1260 ggtaaatttg tttatttcta gtgcctgtca aatgctagtt tttgcgcagg gttgtgtaaa 1320 tatttgggtt tgcgttgacc tgtaaaaata atacaatgtt aaatagtgta agtgtcagtg 1380 aatctgcagg ccagtatgtt tgctgtaaat catgaagaaa aatttattga catgtttgat 1440 attttttttt tttttcgaga gaaagacaaa ttcctgaagg cagcatcact tgacgaacaa 1500 aaagagaaga aatgtgttat ttccctaaaa aatgtgagat tagagatgaa ctcagtttac 1560 atacattgat gcaaattctt tcatatatat atatttttaa tgtacaactc taaaggtatt 1620 tacatttctg tattttaatt gactatggtt tattctcact gtaattgact gcacaacagg 1680 atattgatat tagtgattgt taatgtgtat tataatgaca tttgttcttg gtaatgtatg 1740 cactttaatt tcttgcagtg tttaatttct tttcacccat tttaaattgt gaatgcaggt 1800 ttgacagaac cacttgaaaa tgttgtaaaa aagttctctc agcggtattc ggtatgttca 1860 aatgttgtgc attttaatgc aatgttttaa atgttcatag tcattgaaaa tttcaaataa 1920 agtattagct gatgaaaaaa aaaaaaaaaa aaa 1953 // |
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