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EBI DbfetchID BC152161; SV 1; linear; mRNA; STD; VRT; 1414 BP. XX AC BC152161; XX DT 28-AUG-2007 (Rel. 93, Created) DT 19-SEP-2007 (Rel. 93, Last updated, Version 2) XX DE Danio rerio zgc:92867, mRNA (cDNA clone MGC:173786 IMAGE:8104222), complete DE cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1414 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1414 RG NIH MGC Project RA ; RT ; RL Submitted (21-AUG-2007) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000058203; Danio_rerio. DR Ensembl-Tr; ENSDART00000011706; Danio_rerio. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: John Postlethwait, University of Oregon CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 316 Row: i Column: 21 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 51859405. XX FH Key Location/Qualifiers FH FT source 1..1414 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_5" FT /clone="MGC:173786 IMAGE:8104222" FT /tissue_type="Ovary" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..1414 FT /gene="zgc:92867" FT /note="synonyms: fj36e06, wu:fj36e06" FT CDS 139..1251 FT /codon_start=1 FT /gene="zgc:92867" FT /product="zgc:92867 protein" FT /db_xref="GOA:Q66HT8" FT /db_xref="InterPro:IPR005502" FT /db_xref="UniProtKB/Swiss-Prot:Q66HT8" FT /db_xref="ZFIN:ZDB-GENE-040912-85" FT /protein_id="AAI52162.1" FT /translation="MSAAARVVAPVMMLSRFRGALVGSVLGDCIGGEFEGAVDVPLDRV FT LQHLSALEDDTRGDGILQYSDDTAMMRCVADSLLTRMTFDERDMAQRFAKEYSHSPGRG FT YGSGVVQVLRKLASPHLKDVFQPAQAQFGGRGSFGNGGAMRAVPFALAFRSRADVRKYS FT RFGAMLTHSCSLGYNGAALQALAVHLSLQGALALPKDFIDKLISEMEELEKDETAKHDA FT KALNLSEFPYCSRLHRVKELMDKTSVSIEEVISELGNGIAALQSVPTAIFCVLYCLEPQ FT DGLPERFGGLERTIAYSLALGGDTDTIACMAGAIAGAHYGIDSIPLSWQVSCEGVDEAD FT DLARHLYDLYCLPQHNEDRGNNQPHTTNTD" XX SQ Sequence 1414 BP; 357 A; 338 C; 388 G; 331 T; 0 other; aatgacagca gtcctcctca agcacagcaa accgcagttg tcactgtatt actgttattt 60 tcagtagatt cgcggtgtct cgtctgaagc gctttattgt agtgcagctt gtgtttatat 120 tcgagtccgg ttgtagtgat gtcagcggcg gcgcgtgtcg tagcgccggt gatgatgctg 180 tcgcggttcc gcggcgcgct ggtcggctcg gtactcggcg actgtatcgg cggagagttt 240 gaaggcgctg tggatgtgcc tctggatcga gtcctgcagc atctcagcgc tctggaggac 300 gacacacggg gcgacggaat tcttcagtac agcgatgaca ccgccatgat gcgatgcgtt 360 gcagattcgc tcctcaccag gatgacattc gatgagcgag acatggctca aagatttgca 420 aaggagtata gtcactctcc agggcgaggt tacggctcgg gtgtcgttca ggttctgaga 480 aagcttgcgt caccccatct gaaggatgtc ttccagcctg cacaggctca gtttggtggc 540 cgtggatctt tcggcaatgg aggagccatg agagcagtgc ccttcgctct ggccttcaga 600 agtcgtgctg atgtccgcaa gtactcgcgg tttggcgcta tgctaacaca ctcatgctct 660 ttgggctaca atggggcagc gctgcaggcc cttgctgtcc atctgtcgct ccagggtgct 720 ttggctctgc ctaaagattt catcgacaaa ctgatctcag aaatggaaga gctggaaaaa 780 gacgaaacag ccaagcatga tgctaaagcg ctaaatttat cagagtttcc atattgttca 840 cgtttgcaca gagtgaaaga actcatggac aaaaccagcg tgagcatcga ggaggtcata 900 tctgaactgg ggaacggcat cgctgcatta cagtctgtgc ccactgccat cttctgtgtg 960 ctgtattgtt tggagcccca ggatggcctg ccggagcgat tcggaggact ggagaggacg 1020 atagcctata gcttggctct gggtggcgac acagacacca tcgcatgtat ggcaggagcg 1080 atcgcagggg cacattacgg catcgactcc attcccctga gctggcaggt cagctgtgaa 1140 ggggtggacg aggctgatga tttagcaagg catctgtatg atctctactg ccttccacag 1200 cacaatgagg acagggggaa caatcagccg cacaccacaa acactgactg agccactaca 1260 gtgccacacg cataagaaaa actttacctg gcacatcgtg tccaatgcac catcatctgt 1320 gtttataaaa ttgtgaatct tctcgtgcaa aattgtttac aataaaaaga acagaatggt 1380 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa 1414 // |
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