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EBI DbfetchID BC151604; SV 1; linear; mRNA; STD; MAM; 3449 BP. XX AC BC151604; XX DT 28-AUG-2007 (Rel. 93, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 2) XX DE Bos taurus chondroitin beta1,4 N-acetylgalactosaminyltransferase, mRNA DE (cDNA clone MGC:148954 IMAGE:8265367), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-3449 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (31-JUL-2007) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000004613; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000006052; Bos_taurus. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: S. Lobo, M. Taniguchi, L. Guan and S. Moore CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 292 Row: g Column: 22. XX FH Key Location/Qualifiers FH FT source 1..3449 FT /organism="Bos taurus" FT /lab_host="ElectroMAX DH10B T1 Phage Resistent cells" FT /strain="Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-23" FT /clone="MGC:148954 IMAGE:8265367" FT /tissue_type="Fetal lung, Hereford, 6 month male fetus" FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..3449 FT /gene="CHGN" FT CDS 508..2082 FT /codon_start=1 FT /gene="CHGN" FT /product="CHGN protein" FT /db_xref="GOA:A7MBK1" FT /db_xref="InterPro:IPR008428" FT /db_xref="UniProtKB/TrEMBL:A7MBK1" FT /protein_id="AAI51605.1" FT /translation="MLRRGLLAWASRVVVLLVLLCCAASVLYMLACTPRGDDERQGLPR FT ANGPRGRASSQAAVLSWEERHRDHVGSLKRQIAQLQEELQERSEQLRAAQQLAGEPAGA FT PGRAQADLLAFLRSQVDRAEVHAGVKQATEYAAVPFDSFTLHKVYQLETGLTRHPEEKP FT VRKDKRDELVEAIQSAVEALNSPAESSPDQRPYTASDFIEGIYRTERDKGTLYELTFRG FT DHKHQFRRLVLFRPFGPIMKVKKEQLNMASTLVNVIVPLARRVDKFRQFMQNFREMCIQ FT QDGRVHLTVVYFGKEEMDEVKGILENTSRAANFRNFTFIQLSGEFSRGKGLDVGARSWK FT GSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPGIIYGHHDAIPALER FT QLVIKKETGFWRDFGFGMTCQYQSDFINIGGFDLDIRGWGGEDVHLYRKYLHSNLVVVR FT APARGLFHLWHEKRCEDELAPEQYRMCMQSKAMNEASHGQLGMLVFRHEIEAHLRRQRH FT KTGSKKS" XX SQ Sequence 3449 BP; 822 A; 895 C; 994 G; 738 T; 0 other; ggtaacattt cttccttccc tacgaccgac cattagaaaa aagtggcggc gcggcgagcg 60 gtcccccgac cccacctgaa ccgcggcttc gctgcggacg cacagcccag gccccggcgc 120 cttcgggagc cagcgggcac ccttcctcct tgcgagattc ctttccattt caaggaggaa 180 agtcaagata tttttactca gtggaagaat gatgtagttt catcctaacc ttcttttctt 240 atgcttccag atcccctctg gaaggttacg atgggaatga gcctgacgac ttggatggtt 300 tccccgactt gctgcctctg cccccacgtc cgtccttcgg aagtcaggaa agtgctgcgc 360 gtggtggtgg cttcccagcg acgaggcgtg gcggtgtaga caggaatgga tgagagcggc 420 tcgggggccc tcgcacgcgt gcttccggag gtgtagtctg gggacgcccc tgcgggccgg 480 ggccgcatgg ccgactcctg agccaggatg ctgcgccggg ggctgctcgc ctgggcctcc 540 cgggtggtgg tcttgctcgt gcttctctgc tgcgcggcgt ctgtcctcta catgctggcc 600 tgcacgccga ggggcgatga tgagcgccag gggctgccca gggccaacgg ccccaggggc 660 agggccagct cccaggcggc ggtgctcagc tgggaggagc gtcaccgcga ccacgtcggg 720 agcctcaaga ggcagatcgc gcagctgcag gaggagctgc aagagcggag cgagcagctg 780 agggccgcgc agcagctggc gggggagccc gcgggcgccc cgggcagggc ccaggccgac 840 ctgctggcct tcctgcgctc gcaggtggac agggcggagg tgcacgccgg cgtcaagcag 900 gccaccgagt acgccgccgt gcccttcgac agcttcacgc tgcacaaggt gtaccagctg 960 gagaccggcc tgacccgcca ccccgaggag aagcccgtgc gcaaggacaa gcgggacgag 1020 ctggtggagg ccatccagtc ggctgtggag gccctgaaca gccctgctga gagcagcccc 1080 gaccagcggc cctacacggc ctcggacttc attgaaggga tctaccgcac agagagggat 1140 aaaggcacgt tgtacgagct cacgttccga ggggaccaca agcaccagtt cagacgcctg 1200 gtcttattcc ggccgttcgg ccccatcatg aaggtgaaga aggagcagct gaacatggcc 1260 agcacgctgg tcaacgtcat cgtgccgctg gccaggaggg tggacaagtt ccggcagttc 1320 atgcagaact tcagggagat gtgcatccaa caagatggga gggttcatct cactgtcgtt 1380 tactttggaa aagaagaaat ggatgaggtc aaaggaatac ttgagaacac ttcccgagcc 1440 gccaacttca ggaacttcac cttcatccag ctgagcggag agttctctcg ggggaagggg 1500 ctggacgtgg gcgcccgctc ctggaagggc agcaacgtgc tgctcttctt ctgcgacgtg 1560 gacatctact tcacctccga gttcctcaac acctgcaggc tgaacgcgca gccagggaag 1620 aaggtgtttt atcccgtcct tttcagtcag tacaatccag gcataatata cggccatcac 1680 gatgcaatcc ctgctttgga gcggcagctg gtcataaaga aggagactgg attctggaga 1740 gatttcgggt tcgggatgac gtgccagtac cagtccgact tcatcaacat aggcggcttc 1800 gacctggaca tcagaggctg gggcggcgag gacgtgcacc tctaccgcaa gtacctgcac 1860 agcaatctgg tggtggtgcg cgcaccggcg cggggcctct tccacctgtg gcacgagaaa 1920 cgctgcgagg atgagctggc gcccgagcag taccggatgt gcatgcagtc caaggccatg 1980 aacgaggcgt cccacgggca gctggggatg ctggtgttcc ggcacgagat cgaggcccac 2040 ctccgcagac agagacacaa gacgggcagc aagaagtcat gaacggcccc tgcagggaag 2100 caggggtgcg gagactcttt attttttttt tctttccttt ttgccgttgc aacaaggaaa 2160 aatattgccc caaaagggca aggaaagcat tcgactggtt agtaaaacgg acgagggggg 2220 tttctttctg cctgtatagc ttatgcaaca agcatcaaat gcccccctac ttggctgcag 2280 aagcagccca aacacaccaa accatggcga ccaacagaga cggtctcatt gtgagcttga 2340 aggcgtggag gttgtgattg tgtttacagc aaagtgagtg ctgttgttct gcgcttattg 2400 aaatattcat gaaggaaggg aagctttgta aaaagttcat taggatggaa ggccagcaca 2460 tgcctcccgg tctgaggggt gatcagccct tctctggggt ctgggagctg agagatcagg 2520 atgccggcaa ggagaccgtg tgaaattcaa agatacactc atggtgatct ttgtgaatat 2580 agtaaacaaa accaaatgga ctaaaaatga gaaaacaaag aaactcgtag ctattgtatc 2640 atctccccca atattaacca gaagtaatct actcatcttt ttggttgtag ttttaaccat 2700 ctctgttaat tttatttaaa aatgcacttt ttttggctta tgagttatat tctgcttatt 2760 taattaccca tttgcaagcc ttatgaagag agcacaagtt agctacattt tggtattttc 2820 taagaagata ctttttgctg ccttggttca gttcagagca tcagattgtg acccacagcc 2880 ggggatatgg cagacgctga tcctgtgggg agtggccagc agacggtcat caaggggatg 2940 gcgtggcttg gggctgctga ccacatgggc acacggatac tttatctgaa gagtatttcc 3000 aaagtggagc aactgaacac tggtgggaat agaaaatgta ctttttacct taacagagaa 3060 ggaaacaaac tcattcagac tggtgataaa agtcagaaaa cacgttttct cctcagggga 3120 actggggacc actttcttac ctgttgaaat aaaccaaagc agactgtatg aaccaaacgc 3180 tctcttttct aagcagggtg ctcttcctgg cttctggctt ccacgagaag aaacacaagg 3240 aaatgtcttt aatgaaaggt cactccaccc gccagcagcc ggtgggacag acgattttga 3300 ggtgggatct tccaacacag ccgagcggca gtgacttaat tgttttttaa attacgctgt 3360 tctactcagt caccaagatg cttctgaaaa tctcatttta ttacatttta caactattaa 3420 aaaaaataaa cgcaaaaaaa aaaaaaaaa 3449 // |
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