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EBI DbfetchID BC151593; SV 1; linear; mRNA; STD; MAM; 5381 BP. XX AC BC151593; XX DT 12-SEP-2007 (Rel. 93, Created) DT 12-SEP-2007 (Rel. 93, Last updated, Version 1) XX DE Bos taurus UDP-N-acetyl-alpha-D-galactosamine:polypeptide DE N-acetylgalactosaminyltransferase 4 (GalNAc-T4), mRNA (cDNA clone DE MGC:151803 IMAGE:8469622), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-5381 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (31-JUL-2007) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000033608; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000047753; Bos_taurus. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: Plate: Row: Column: 0. XX FH Key Location/Qualifiers FH FT source 1..5381 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-29" FT /clone="MGC:151803 IMAGE:8469622" FT /tissue_type="Fetal skin , female fetus 6 months, L1 FT Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene 1..5381 FT /gene="GALNT4" FT CDS 237..1973 FT /codon_start=1 FT /gene="GALNT4" FT /product="GALNT4 protein" FT /db_xref="GOA:A7YY74" FT /db_xref="InterPro:IPR000772" FT /db_xref="InterPro:IPR001173" FT /db_xref="InterPro:IPR008997" FT /db_xref="UniProtKB/TrEMBL:A7YY74" FT /protein_id="AAI51594.1" FT /translation="MAVRWTWARRSCLLLALLTVAYLLVELSVSTLHASLRAGGAREPG FT SRQLSEPGKKAVDLSRPLYEKPPADSHALGEWGKASKLQLSESELKQQEELIERYAINI FT YLSDRISLHRHIEDKRMYECKSKKFNYRRLPTTSVIIAFYNEAWSTLLRTIHSVLETSP FT AVLLKEIILVDDLSDRVYLKTQLETYVSNLDRVRLIRTNKREGLVRARLIGATFATGDV FT LTFLDCHCECNTGWLEPLLERIRKDETVVICPVIDTIDWNTFEFYMQTGEPMIGGFDWR FT LTFQWHSVPKHERDRRKSRIEPFRSPTMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLE FT LSFRVWQCGGKLEIHPCSHVGHVFPKRAPYARPNFLQNTARAAEVWMDEYKEHFYNRNP FT PARKEAYGDISERKLLRERLRCKSFDWYLKNVFSTLHVPEDRPGWHGAIRSIGISSECL FT DYNAPDNNPTSANLSLFGCHGQGGNQFFEYTSNKEIRFNSVTELCAEVPELKKHVGMQN FT CPKDGFPIPANIIWHFKEDGTVFHPHSGLCLSAFRTQEGGPDVQMRTCNALDKNQIWKF FT ET" XX SQ Sequence 5381 BP; 1559 A; 1005 C; 1157 G; 1660 T; 0 other; ggaagtgggg agagaggagt tggggctgca ccggaggccg agccccgcgg aggtcccagg 60 tgacccccag gaagcccccg cggctgccga ggagccgaac gcctgcatga aaggagggac 120 ccgctcggaa gttcgctcct acctgagccc ggagctcaag tggcgggtcc cgcagccctt 180 cccctgcgcg cggtgactct ggtggccgcg tccgcgcccc agccatgaag atccggatgg 240 ccgtaaggtg gacgtgggca cgcagaagct gtctgctgct ggcgctccta acagtggcct 300 acctcctggt ggaactctcc gtctccactt tgcatgcctc cttacgagcc ggcggtgccc 360 gggagccggg gtcaagacag ctctcagagc cggggaagaa agcagtggat ttgtctcgac 420 cgctgtatga gaagccccct gcagattccc atgcccttgg ggagtggggg aaagccagca 480 aactccagct cagcgagagt gaactgaagc agcaagagga actcattgag agatatgcca 540 ttaacattta cctcagtgac aggatttccc tgcaccgcca catagaggat aaaagaatgt 600 atgagtgtaa gtccaagaag tttaactaca ggcgacttcc gaccacttct gtcatcatcg 660 ctttctataa cgaagcctgg tcgactttac ttcgcaccat ccacagtgtt ttagaaactt 720 ctcccgcagt ccttctgaag gagatcatct tagtcgatga cttgagcgac agagtatatt 780 tgaagacaca gcttgaaact tacgtcagca atctggatcg agtccgcctg attagaacaa 840 acaagcggga agggctggtg agggcccgtc tgattggggc cacttttgcc actggcgatg 900 tcctcacttt cctggattgt cactgtgagt gtaatactgg ttggctggag ccacttttgg 960 aaaggattcg taaggatgaa acagtggtca tttgtcctgt tatagacacc atcgactgga 1020 atacttttga attctatatg cagactgggg agcccatgat tggtgggttc gactggcgtc 1080 tgacattcca gtggcattct gttcccaaac atgaaaggga caggcgtaaa tcgagaattg 1140 aaccattcag atcgcccacc atggccggag gactgtttgc agtcagcaag aagtattttc 1200 agtaccttgg aacttacgat actgggatgg aagtgtgggg aggtgaaaac ctggagctgt 1260 ctttcagggt gtggcagtgt ggaggtaaac tggagatcca cccatgttcc cacgtgggcc 1320 acgtattccc taagcgggca ccatatgctc ggcccaattt cctgcagaat actgctcggg 1380 cagcggaagt ctggatggac gagtacaaag agcatttcta caaccgaaac cctccagcaa 1440 ggaaagaagc ttatggcgat atttctgaaa gaaaattact acgggaaagg ctgaggtgca 1500 agagctttga ctggtatttg aaaaatgtgt tttctacttt gcatgttcca gaggataggc 1560 caggctggca cggagctatt cgcagtattg ggatctcttc tgaatgttta gattataatg 1620 ctcctgacaa caaccccaca agtgctaacc tttccctgtt tggatgccat ggtcaaggag 1680 gcaatcaatt ctttgaatat acctccaaca aagaaataag gtttaattcg gtgacggagt 1740 tatgtgcaga agttcccgag ctaaaaaagc atgtgggaat gcaaaattgt cccaaagatg 1800 ggtttcctat cccagcaaac attatttggc attttaaaga agatggaacc gtttttcatc 1860 cccactcagg actgtgtctt agcgctttcc ggacacagga gggcgggccc gatgttcaga 1920 tgagaacttg taatgctctg gataaaaatc aaatctggaa gtttgagaca tagaggagca 1980 taacagcact ttggtcctga actgacaata gcttcagggg agtcagcctt cagagagcct 2040 cagtgaagat ttatttcatc agcattcacc cagtggtcat ctgcaacagc tctgtaaaag 2100 cggtggagca ttttggttaa aaaaaagaaa acaaaacact gaaactgggt acacagacag 2160 ctgttgttta atatttcaaa gtgccttatt ttggggttgt tttatttaag agctttgtca 2220 atatgttctc ttacttctta aagaagtcga ctcgactgtg acttgagata cacaaaacat 2280 ttaagtgcca gacttaatat taaaagaata taaaagtcca agcaaaatga gggatgattt 2340 atgttgatgg gtaagttcac tgcacatctc attaaaaaga aaaaacaaaa aactcagaaa 2400 tgtgcagttc aagctgttgc tatttttgtt gtacatagaa tttgaatttt ctttagtccc 2460 caaatgaaat tttaggtttt acttagtttt tttattctaa ttttctgtta ctcaaataga 2520 aatcaaggaa ggttactctt caggaaaaag gcctggttta gttatattgt cactggatgt 2580 gaattggaat tgagtttaga gttcttccta acatacagac atctcagaaa aatataccca 2640 catctgaatg aaatgggaac catttacatt ccacactttg tggaattgag gggattgagc 2700 tattagactt aactgctcta tgttgatacc tcagattgct ctggttttgt aagctgtcct 2760 ctctatgaac ttgtttgtgt gtatgggata ttttctgatt gcacttcctt aaactttgaa 2820 tgtatcagag agggactcat tcagaatact gtgcttctct ttgttaatgc ttaatcactt 2880 aaagtaaacg cttaataatc gcttaaaata aacacagtag aggccaactg tgtttactga 2940 aacgtgtgaa actgaaagtg agccctgttg gacaaagtca gtgaaactct cctacagagt 3000 tcttgctgat gaggactttt aagggttgat cttaagattt tccaagtgga aggatagcct 3060 ctgcaatggt agatggggcc ttccagcttc ttttctgcac ggagtcccag gcctggtgcc 3120 tagatagctg tcagtaattg tgggtgaatg aatgactggc tgaatgaatg gctcagccaa 3180 acaatgtggc tttggtcaag tcatttgatt aaatgactca ttttgggcct tagtttcctc 3240 atctgtaaaa tgtgggtgct ggagcaggtc ttgaagattc cctccagcac tggaatgtcc 3300 tgcttgtaca ttcagtgact gtgcaatctc tagaacactt ttatctcctc cctgctaacg 3360 cagataatgt tgttgagaaa tggttattcc aggtatgaag ctggaaaaaa gaaatggttt 3420 ttgaaaatta agtcagctga gctcaactga agtggtttat tttggattga gtggaaagtt 3480 gtggccagtg tttgtattca ttttattttg agaattgctg aatcaatttt gttttttatt 3540 ctttgatctt tcaaattctg aaaggaatct tttgggttaa gaatattaat attttccaaa 3600 ctaatttatg tgagaagtaa acatactttt acaaagttac ttttactgtt tttattccaa 3660 tgttatatcc agaaatcaat cacaggctga attcagaatt aaatcttaac tagttcattt 3720 tgctgtagat ttgtgaaaaa tgcatgctcc atgaacgatc agtccacagt actcagaagt 3780 tgtttttggt gtctgcttga ctacttggag agtaggaact tggcaaaatc taaattcaac 3840 aaaagttttt agaataacct tttcaaacag taatattgct ttgtatattt tgtttctctt 3900 tttcttaaaa taaaaatgtg ttcataattt tctgtatgtt atgtagcaaa gaattgttta 3960 gattctatgt acaatgtgca tgaccttggg tgtaatttag gaagaatttg taatagtcct 4020 ctgaattcgt tcattggcag cagatattct actaaaccca ccctcacctc ttactcaatc 4080 tgccttttgg tttttaaaaa tcacttttct ctttttattt atttttgttg ttcttcatgc 4140 atgctcagtc gcttagtcat atcctactct ttgtgacccg atggactgta gctcttcagg 4200 ctcctctgcc catgggattt cccaggcaag aatactggag tgggttgcca tttctttctc 4260 caggggatct tcccaatcca gggattgaac ctgtgtctcc tgcattggca ggtggttgtt 4320 cttcttagcc ccttatcaga tgggagtgct aagattgata tattctagat gtatttattg 4380 gaattatttt tatcctagaa tctttctgct ctcatcaaaa gaaaaaggga gcattgaaaa 4440 gtaaagcact gaattcttta tttacctttt gcctaaattg cagggtgtga cccattcatc 4500 tttttggaag aaattttagg ctcgtgtttt atttatatca gtaattcaga ataagcgagt 4560 ggttcattct tcacaataat gtagttaata gaaaaagact tctacatttt catatgtagc 4620 catttccaat ttaatttcta aaacacactg taaaactaca aggtattttt tatttcctac 4680 tcctaattta ttggtaccaa agctcttttg ctgtatataa ttaacagatc ttttaagtta 4740 atttacgtgc ttaaaaagtg ttatgaaaat ttggtagaca agaatttcaa ctttaaatga 4800 tcactggcga ctgaactgaa ctaaactaat gttatttagt gttcaattct gtgaataggt 4860 tgactctaaa tagtcatttt tagcagccat ttaaaaacaa tgatctagtc atctacagag 4920 tctctataac tcaaaataac ttgtttgtaa aagaaaattt gtctatgcac cctgtagtag 4980 gctcttgagt attcattata tgtcagcaaa taaaactttt ctaggttgat ggtaggttat 5040 ttttcagttg tgtagttgat ttagggtctc aattttagtt aataaaatac ttagttttga 5100 cttatttgtc cttttgaatt gatgttttaa taatattatt aaatgagcac aaagaatgtt 5160 gagattcaga ttaatctctt ttgaacaatg aattttttgg tgtatgatga gcgatttcta 5220 cccttttttc cttttgttaa tgatatttgc aatattgatt aagacatgta aaataaaaca 5280 tatgcctaat tatttttgca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 5340 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a 5381 // |
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