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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC151511; SV 1; linear; mRNA; STD; MAM; 1054 BP.
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AC   BC151511;
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DT   14-AUG-2007 (Rel. 92, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 2)
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DE   Bos taurus myo-inositol oxygenase, mRNA (cDNA clone MGC:179440
DE   IMAGE:8657121), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
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RN   [1]
RC   NIH-MGC Project
RP   1-1054
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (31-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000002559; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000003315; Bos_taurus.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: S. Lobo, L. Guan and S. Moore
CC   cDNA Library Preparation: S. Lobo, L. Guan and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 320 Row: i Column: 4.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1054
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B T1 Phage Resistent cells"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-34"
FT                   /clone="MGC:179440 IMAGE:8657121"
FT                   /tissue_type="Kidney, 8.5 months female calf, Hereford"
FT                   /note="Vector: pCMV.SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1054
FT                   /gene="MIOX"
FT   CDS             14..871
FT                   /codon_start=1
FT                   /gene="MIOX"
FT                   /product="MIOX protein"
FT                   /db_xref="GOA:A7MBE4"
FT                   /db_xref="InterPro:IPR007828"
FT                   /db_xref="UniProtKB/Swiss-Prot:A7MBE4"
FT                   /protein_id="AAI51512.1"
FT                   /translation="MKVAADPDPSLVSQRDMEPEAAKDKDSFRNYTSGPLLDRVFATYK
FT                   LMHTWQTVDFVRRKHAQFGGFSYKRMTVMEAVDMLDGLVDESDPDVDFPNSFHAFQTAE
FT                   GIRKAHPDKDWFHLVGLLHDLGKVLALAGEPQWAVVGDTFPVGCRPQASVVFRDCTFQD
FT                   NPDLQDPLYSTELGMYQPHCGLENVLMSWGHDEYMYRMMKFNKFALPPEAFYIIRFHSF
FT                   YPWHKFGDYQQLCNEQDLAMLPWVQEFNKFDLYTKSSSLPDVAALRPYYQGLVDKYCPG
FT                   ILCW"
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SQ   Sequence 1054 BP; 217 A; 348 C; 288 G; 201 T; 0 other;
     ggcctctctc aagatgaagg tggctgcgga cccagaccct tccctggtct cccagcgtga        60
     tatggagcca gaagcagcca aagacaagga cagcttccga aactacacgt ctggcccgct       120
     cctggaccgt gtctttgcca cctacaagct catgcacaca tggcagaccg tggacttcgt       180
     caggaggaag catgcccagt tcgggggctt ctcctataag aggatgactg tcatggaggc       240
     tgtggacatg ctggacgggc tggtggatga gtcggacccc gacgtggact tccccaactc       300
     cttccatgcc ttccagacgg ctgagggcat ccggaaggcc catccagaca aggactggtt       360
     ccacctcgtg gggctcctgc acgacctggg gaaggtcctg gctctggcag gggagcccca       420
     gtgggcagtc gtcggagaca ccttcccagt tggctgccgt ccccaggcct ctgtggtctt       480
     ccgtgactgc accttccagg acaaccctga cctccaggac cccttgtaca gcacggagct       540
     tggcatgtac cagcctcact gtgggctcga gaacgtcctc atgtcctggg gtcatgacga       600
     gtacatgtac cggatgatga agttcaacaa attcgccctc ccaccggagg ccttctacat       660
     catccggttc cactcgttct acccctggca caagttcggc gactaccagc agctgtgcaa       720
     cgaacaggac ctggccatgc tgccctgggt gcaggagttc aacaagttcg acctctacac       780
     caagagctcc agcctgccag acgtggccgc gctgaggccc tactaccaag ggctcgttga       840
     caagtactgt cctggcatcc tgtgctggtg actgcccgcc taacccctca cctgctgggt       900
     gacccgggct cagccactgt cgggaacagt gtccaccgcc gcagcccttc cggggacccc       960
     acaggcccac ctgcactgcc tgcccggttg gccccctccc tgctggtaat aaagaccctg      1020
     aagcagcttg cgattccgaa aaaaaaaaaa aaaa                                  1054
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