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EBI DbfetchID BC151381; SV 1; linear; mRNA; STD; MAM; 3575 BP. XX AC BC151381; XX DT 14-AUG-2007 (Rel. 92, Created) DT 16-OCT-2008 (Rel. 97, Last updated, Version 3) XX DE Bos taurus glycogen synthase 1 (muscle), mRNA (cDNA clone MGC:166438 DE IMAGE:8520401), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-3575 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (31-JUL-2007) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000005646; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000043084; Bos_taurus. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 308 Row: k Column: 3. XX FH Key Location/Qualifiers FH FT source 1..3575 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-30" FT /clone="MGC:166438 IMAGE:8520401" FT /tissue_type="Fetal muscle , female fetus 6 months, L1 FT Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene 1..3575 FT /gene="GYS1" FT CDS 182..2392 FT /codon_start=1 FT /gene="GYS1" FT /product="GYS1 protein" FT /db_xref="GOA:A7MB78" FT /db_xref="InterPro:IPR008631" FT /db_xref="UniProtKB/Swiss-Prot:A7MB78" FT /protein_id="AAI51382.1" FT /translation="MPLNRTLSMSSLPGLEDWEDEFDLENTVLFEVAWEVANKVGGIYT FT VLQTKAKVTGDEWGDNYYLVGPYTEQGVRTQVELLEPPTPALKRTLDSMNSKGCKVYFG FT RWLIEGGPLVVLLDVGASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLG FT EFLAQSEEKPHVVAHFHEWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYN FT NLENFNVDKEAGERQIYHRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNG FT LNVKKFSAMHEFQNLHAQSKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGAD FT VFLEALARLNYLLRVNGSEQTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEK FT FGRKLYESLLVGSLPDMNKMLDKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILT FT TIRRIGLFNSSADRVKVIFHPEFLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPA FT ECTVMGIPSVSTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQ FT QSRRQRIIQRNRTERLSDLLDWKYLGRYYMSARHMALAKAFPEYFTYEPHEADATQGYR FT YPRPASVPPSPSLSRHSSPHQSEDEEEPRDLPPDEDDERYDEDEEAAKDRRNIRAPEWP FT RRASCTSSTGSKRGSVDTAPSSSVSTPSEPLSPASSLGEERN" XX SQ Sequence 3575 BP; 748 A; 1137 C; 942 G; 748 T; 0 other; cgcttgcagc ccgggtctga ccgctccggg cgggggtgcg gtcgtgcaat aggaagccga 60 gggcggtgcg agcttcccgt cgggcaccag ctacctggcc cggcgccctg cccagtgcat 120 tccttcgaca cctctagggc ccccaccggt ggcccccggg agccctctaa ccgcgtcggc 180 catgcctcta aaccgcactt tgtccatgtc ctccctgcca ggactggagg actgggagga 240 tgaattcgac ctggagaaca cagtgctctt cgaggtggcc tgggaggtgg ccaacaaggt 300 gggcgggatc tacacagtgc tgcagacgaa ggcaaaggtg acgggggacg agtggggtga 360 caactactac ctggtgggac cgtacacgga gcagggcgtg aggacccagg tggagctgct 420 ggaacccccg accccggccc tgaagaggac gctggactcc atgaacagca agggctgcaa 480 ggtgtacttc gggcgctggc tgattgaggg gggccccctg gtggtgctcc tcgatgtggg 540 ggcctcagcc tgggccctgg agcgctggaa gggggagcta tgggacacat gcaacatcgg 600 ggtgccctgg tacgaccggg aggccaacga cgccgtcctt tttggcttcc tcaccacctg 660 gttcctgggt gagttcctgg cccagagcga ggagaaacca cacgtggtcg cacacttcca 720 cgagtggttg gcaggtgtcg ggctctgcct gtgccgcgcc cggcggctgc ccgtggctac 780 catcttcacc acccacgcca cgctgctggg gcgatacctg tgtgctgggg ctgtggactt 840 ctacaacaac ctggagaatt tcaacgtgga caaagaagca ggtgagaggc aaatctatca 900 ccgctactgc atggagcggg ccgcagccca ctgcgctcat gtcttcacta ctgtgtccca 960 gattaccgcc attgaggctc agcacctact caaaaggaaa ccagatatcg tgacccccaa 1020 tggactgaat gtgaagaaat tctctgccat gcatgagttc cagaacctcc atgctcagag 1080 caaggctcga atccaggagt ttgtgcgggg ccatttttat gggcacctag acttcaactt 1140 ggacaagacc ttgtacttct ttatcgccgg ccgctatgag ttctccaaca agggggctga 1200 cgtcttcctg gaggccttgg cccggctcaa ctatctgctc agagtgaatg gcagtgagca 1260 gacggtggtc gccttcttca tcatgccggc tcggaccaac aatttcaacg tggaaaccct 1320 taagggccag gccgtgcgca agcagctttg ggatacggcc aacacagtga aggaaaagtt 1380 tgggaggaag ctttacgaat ccttgctggt ggggagcctc ccagacatga acaagatgct 1440 ggacaaggag gacttcacta tgatgaagag agctatcttt gccacacagc ggcaatcttt 1500 ccctcctgtg tgcacccaca atatgctgga tgactcctca gaccccatct tgacaaccat 1560 ccgccgaatc ggcctcttta atagtagtgc tgacagagtc aaggtgattt ttcacccgga 1620 gttcctgtct tctacgagcc ctctgctccc tgtggactat gaggaatttg tccgtggctg 1680 ccaccttggg gtcttcccct cctactatga gccttggggc tacacaccag ctgaatgcac 1740 ggtaatgggt atccccagtg tctccaccaa cctctccgga ttcggctgct tcatggagga 1800 acacatcgca gacccctcag cttacggtat ctacattctg gaccggcgat tccgcagtct 1860 ggatgattcc tgctcgcagc tcacctcctt cctctacagt ttctgccagc agagccgaag 1920 gcagcgcatt atccagcgga accgaacgga gcgcctctct gaccttctgg actggaaata 1980 cctaggccgg tactacatgt cagcgcgcca catggcgctg gccaaggcct ttccagaata 2040 cttcacctac gagcctcacg aggctgacgc gacccagggc taccgctacc cacggccagc 2100 ctcagtgcca ccatcaccct cgctgtcgcg acactccagc ccgcaccaga gcgaggatga 2160 ggaggaaccc cgggacttac cacctgatga agatgacgag cgctacgacg aggacgagga 2220 ggccgccaag gaccggcgca acatccgcgc ccccgagtgg ccacgccgcg cctcctgcac 2280 ctcttccacc gggagcaagc gtgggtctgt ggacacagcg ccctccagct cagtcagcac 2340 ccccagcgaa ccccttagcc ccgccagctc cctgggcgag gaacgcaact aaatccccaa 2400 ccccacacta tcccttcccg ccccccgccc cgccaaccct gcctccctta tccagagaat 2460 ggatgtggaa tggcgctgtc tcaaaacttc actccagatc ttcaaccctc tgtggggtcc 2520 acaaccccgc ctcctccgcc atacactcca gcccctctag ccccgctctt ggaatcccca 2580 acactccagt atccacaaca ctgtgccttt attgtgccct ggagttcccc cccgggccgt 2640 cccagaggcc agggatctgc cattgccctg ccgtggtgcc agaggttttc agaaacctgc 2700 tctgttgcct tttatgctgg ggctcctaga atcccttgcg cttactaatt ctacagcata 2760 cagagtctgc cacgtgcagg cctggccagg acgccactga gcactagaaa ccatgtgccg 2820 tctctgctag tgagacaatc aagtccagag ctggcgccct ttcagggact taactgagtg 2880 caggttctct atttcagctc cagaactcga gctccaggcc agtgcagtcc tgtttactct 2940 gagggagccc tccctggggt gtccaactct gcctggagga tccctccacc ccaactccct 3000 tcttcctctg cactttggcc aagcaagtgg gggcagaacc acttggcttc tcattcctac 3060 tggagaacac tgtcttggtc tagatgcctt tctggccttt tctggaccag accctactcc 3120 tccttccctg aatctgaatt cccccatatc tctagactcc tgtggcttcc agggaatccc 3180 tctgttgagg acaactggct gtcttctcct gcaccctccc ccaaacaacc ctcaactgct 3240 agacccacca tgaaaccact gggttctggg tcccagctgc tgattctaga accccgcctc 3300 tgtgctgcat cctggtccca tcccctagat ctagaactca gcccactgga ttctagaacc 3360 tccatattta cctcacctcg aggctcttcc atccccaagc tgtgccctgt ccccagcttt 3420 ggtgaaagag aggggcccct tatgtgtgct gtgttgtgtc tgctgcactt ggtttgcagt 3480 tgggagcgga aggcagaagg ggtgtgattg aagtgtgtcc agagatgaaa aaatacatat 3540 atatttaaga aaaaaaaaaa aaaaaaaaaa aaaaa 3575 // |
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