EBI Dbfetch

ID   BC151367; SV 1; linear; mRNA; STD; MAM; 2669 BP.
XX
AC   BC151367;
XX
DT   31-JAN-2008 (Rel. 94, Created)
DT   31-JAN-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Bos taurus mannosyl (alpha-1,3-)-glycoprotein
DE   beta-1,2-N-acetylglucosaminyltransferase, mRNA (cDNA clone MGC:166335
DE   IMAGE:8491551), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-2669
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (31-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000001546; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000002024; Bos_taurus.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 308 Row: i Column: 23.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2669
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-29"
FT                   /clone="MGC:166335 IMAGE:8491551"
FT                   /tissue_type="Fetal skin , female fetus 6 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..2669
FT                   /gene="MGAT1"
FT                   /note="synonym: GNT-1"
FT   CDS             252..1595
FT                   /codon_start=1
FT                   /gene="MGAT1"
FT                   /product="MGAT1 protein"
FT                   /db_xref="GOA:Q5E9I4"
FT                   /db_xref="InterPro:IPR004139"
FT                   /db_xref="UniProtKB/TrEMBL:Q5E9I4"
FT                   /protein_id="AAI51368.1"
FT                   /translation="MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRLPSDSALDD
FT                   DPASLTREVIRLAQDAEVELERQRGLLQQIREHHARWSQRWRVPTVAPPVPPRVPVTTP
FT                   PAVIPILVIACDRSTVRRCLDKLLNYRPSAEHFPIIVSQDCGHEETAQVIASYGSAVMH
FT                   IRQPDLSTIAVPPDHRKFQGYYKIARHYRWALGQVFHEFKFPAAVVVEDDLEVAPDFFE
FT                   YFQATYPLLRADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAEL
FT                   EPKWPKAFWDDWMRRPEQRQGRACVRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQHF
FT                   VPFTQLDLSYLRQETYDRDFLARVYGAPLLQVEKVRTSERSELQEVRVQYTSRDSFKAF
FT                   AKALGVMDDLKSGVPRAGYRGIVSFLYRGRRVHLAPPQTWDGYDPSWN"
XX
SQ   Sequence 2669 BP; 528 A; 778 C; 749 G; 614 T; 0 other;
     cgagaagggc cggccgggcg gaaggcgccg gcagccgcgc gagcgccttg aacgcgccgg        60
     ggcacccggc tcgctcccca cgcttcgggg cgggccaagt tcagggccgg gaagttggaa       120
     ggacctggtg catggctgct tcctaatcct ggagcccaga ggaagcatcc ctagaaccgc       180
     gggggtgtga gccaggcaag ctgagggcag ccttgagccc tacccttccc gcctcccctg       240
     cgggggccag gatgctgaag aagcagtctg cagggcttgt gctgtggggt gccatcctct       300
     ttgtggcctg gaacgccctg ctgctcctct tcttttggac acgcccagcg cctggcaggc       360
     taccctcaga cagtgctctt gatgatgacc ccgccagcct cacccgcgag gtgatccgcc       420
     tggcccagga cgctgaggtg gagttggagc ggcagcgggg cctgttgcag cagatcaggg       480
     agcaccatgc taggtggagc cagcggtgga gggtacccac cgtggccccg cccgtcccgc       540
     cacgagtgcc tgtgaccact ccaccagctg taatccccat cctggtcatc gcctgtgacc       600
     gcagcactgt tcggcgctgc ctggacaagc tgctgaatta ccggccttct gctgagcact       660
     ttcccatcat tgtcagccag gactgcgggc atgaggagac agcccaggtt atcgcctcct       720
     acggcagtgc tgtcatgcac atccggcagc ctgacctgag caccattgca gtgccacccg       780
     accaccgaaa gttccagggc tactacaaga ttgctcggca ctaccgctgg gcactgggcc       840
     aggtctttca cgagttcaag ttcccagcag ccgtggtggt agaggatgat ctggaggtgg       900
     ctccagactt cttcgagtac tttcaggcca cttacccgct gctgagagcc gacccctccc       960
     tctggtgtgt gtctgcctgg aacgacaatg gcaaggagca gatggtggac tccagcaagc      1020
     ccgaactgct ctaccgcaca gactttttcc ctggcctggg ctggctgctg ttggctgagc      1080
     tttgggctga gctggagccc aagtggccca aggccttttg ggatgactgg atgcgccggc      1140
     cagagcagcg gcagggccgg gcctgcgtgc ggcccgaaat ctccagaaca atgacctttg      1200
     gccgcaaagg tgtgagccac gggcagttct ttgaccagca cctcaagttt atcaagctga      1260
     accagcactt cgtgcccttc acccagctgg acctgtcgta cctgcgacag gagacttatg      1320
     acagggattt ccttgcacgt gtctatggtg ctcccctgct gcaggtagag aaagtgagga      1380
     ccagtgagcg gagcgagctg caggaggtgc gagtgcagta cacgagcagg gacagcttca      1440
     aggcctttgc caaggccctg ggagtcatgg atgacctcaa gtctggtgtc cccagggccg      1500
     gctaccgggg catcgtcagc ttcctgtacc ggggccgccg tgtccacctg gccccacccc      1560
     agacctggga tggttatgat cctagctgga attagcagca cctgcgtgtc catcgtgggc      1620
     cccctccttg ccatctcatg gcctaagatg ggaccgcagt ctctgggctt catcgtcctc      1680
     tctgtgtttc tctcttgggt ccatttatct tttttttttt ctttttccga gtggcattca      1740
     ggtgcacaga tgataaggtg agggggtcaa atcaggggac tctttctggg atatgttggg      1800
     ggagttattg aacaagaaac cactgtgtgg taggagggac ttgagcttat catggccaca      1860
     cacatccaca ttccaggttt tctcctagga catcggtgga gaggttgaca actttagttc      1920
     tcttgatcag gcctcttttc cctctcctgg ctcttctagc cagagtatga gccctcctcc      1980
     tgtacctgtc cccgaccatc tctgctttct cccaattgga gtaggggtag ggggctgtat      2040
     tatgtgagaa ggggatgtat ctgtgccgga atgagactaa ccaaaggggt ttcatcaccg      2100
     tcagggtcca gatagagctg ttaggttgtc agggtttact gcctcctgcc tgtatttctc      2160
     ttcttcccct ctctttcatc tctgacctcc tctcagctct tctttctatg cagcccagca      2220
     gttcatgatt ctaagatgaa atggtgaagg ggaaaagcag aatgttcccc ccagctcatc      2280
     cactgtggtg gggagaaaga cttggatgct ggggcacccc tccctcattc ttcctctaag      2340
     aaacagactg cccctctctc ctctccatcc agtcctttcc aaaaaccagt cctttccctg      2400
     ttgctctagg acagttcatg ctagcctggc ttttggaggc cctctcagtg tgaggtacag      2460
     cagccaagac cattcgaccc aacctccctc ccttctctcc caaacatccc cgggtacaca      2520
     gatcaggatg cagatgggtt ggagagcaat gtgtgtgttt ttgtctcttg cctgacctca      2580
     gttcatggag gaaagtttaa gctacagaat tattttcaaa aataaaggct gacttgtctg      2640
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaa                                        2669
//